NO22G00870, NO22G00870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO22G00870 vs. NCBI_GenBank
Match: XP_005853542.1 (hypothetical protein NGA_2120020, partial [Nannochloropsis gaditana CCMP526] >XP_005855988.1 hypothetical protein NGA_2120010, partial [Nannochloropsis gaditana CCMP526] >EKU20373.1 hypothetical protein NGA_2120010, partial [Nannochloropsis gaditana CCMP526] >EKU22818.1 hypothetical protein NGA_2120020, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 223.8 bits (569), Expect = 6.300e-55 Identity = 141/266 (53.01%), Postives = 168/266 (63.16%), Query Frame = 0 Query: 1 MDLKQCLAILSGRGVCEHGSHEHNQPHTSTASSKTTEPLGQVIDLLSSVPPSSGTSNDKVDKDN----ADQAAAALSTEARAQASVAKLREGLAGLDVQGLIRAFRQAQEERAQAYQRFDEGLNKVLASRAFAEYDGLCAEATAGFAALSNLVNAVEHCLGAAPHERKVLAGLLRRVQTEEKEKLSLTAALHLETFRLATAVAGTTPMGGVSDGEGGAGAGEMTERDGREEMLLREGIKALDVRIGEVKGRINEILEELRYEVEEE 263 MD +C AIL+GR CE GS H H S + LGQVIDL S P S + ++ +++ LS EA+AQ SV KL+EGL L V+ L++ FRQAQEER QAY FD+GL ++L+SRAF EYD LCAEATA FA LSNLVNAV CLG P+ R VLA LLRR+Q EEKEKLSLTAALHLE FRLAT+ +GA DGRE MLLREG + L+ I V RIN++LEE+RYE EEE Sbjct: 6 MDFGKCSAILAGRKSCEVGSQRH---HHSEEEVQEGCLLGQVIDLRPSAPSSESVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTC--------------SGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYEEEEE 254
BLAST of NO22G00870 vs. NCBI_GenBank
Match: EWM21500.1 (hypothetical protein Naga_100019g6 [Nannochloropsis gaditana]) HSP 1 Score: 223.4 bits (568), Expect = 8.300e-55 Identity = 140/266 (52.63%), Postives = 168/266 (63.16%), Query Frame = 0 Query: 1 MDLKQCLAILSGRGVCEHGSHEHNQPHTSTASSKTTEPLGQVIDLLSSVPPSSGTSNDKVDKDN----ADQAAAALSTEARAQASVAKLREGLAGLDVQGLIRAFRQAQEERAQAYQRFDEGLNKVLASRAFAEYDGLCAEATAGFAALSNLVNAVEHCLGAAPHERKVLAGLLRRVQTEEKEKLSLTAALHLETFRLATAVAGTTPMGGVSDGEGGAGAGEMTERDGREEMLLREGIKALDVRIGEVKGRINEILEELRYEVEEE 263 MD +C AIL+GR CE G+ H H S + LGQVIDL S P S + ++ +++ LS EA+AQ SV KL+EGL L V+ L++ FRQAQEER QAY FD+GL ++L+SRAF EYD LCAEATA FA LSNLVNAV CLG P+ R VLA LLRR+Q EEKEKLSLTAALHLE FRLAT+ +GA DGRE MLLREG + L+ I V RIN++LEE+RYE EEE Sbjct: 1 MDFGKCSAILAGRKSCEVGTQRH---HHSEEEVQEGYLLGQVIDLRPSAPSSESVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTC--------------SGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYEEEEE 249
BLAST of NO22G00870 vs. NCBI_GenBank
Match: CBN74958.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 115.9 bits (289), Expect = 1.900e-22 Identity = 77/189 (40.74%), Postives = 107/189 (56.61%), Query Frame = 0 Query: 72 LSTEARAQASVAKLREGLAGLDVQGLIRAFRQAQEERAQAYQRFDEGLNKVLASRAFAEYDGLCAEATAGFAALSNLVNAVEHCLGAAPHERKVLAGLLRRVQTEEKEKLSLTAALHLETFRLATAVAGTTPMGGVSDGEGGAGAGEMTERDGREEMLLREGIKALDVRIGEVKGRINEILEELRYEVE 261 L T A Q +GL G+ L+ +FR+AQEER Y++F+ GL + L ++ Y LC E TAGF+ LS +NA+E LG E K LAG++RRVQ E+EKL++TAA HLE+ R A A+ M S G+G AGA + ++ LL + + L R ++E+LEELRYE E Sbjct: 157 LPTAAAGQEEEGGGLQGLQGMSAGALVASFRRAQEERVALYRKFNGGLKEALRIGDYSGYPALCCEVTAGFSVLSKAINAIEATLG-KDSETKALAGIIRRVQEHEREKLTVTAAHHLESMREARALGMGPGMSVHSGGQGDAGAASPS-----QDRLLSDAVGDLLRRAEGEAAAVSELLEELRYEAE 339
BLAST of NO22G00870 vs. NCBI_GenBank
Match: EJK49372.1 (hypothetical protein THAOC_31760 [Thalassiosira oceanica]) HSP 1 Score: 109.8 bits (273), Expect = 1.300e-20 Identity = 88/239 (36.82%), Postives = 118/239 (49.37%), Query Frame = 0 Query: 24 NQPHTSTASSKTTEPLGQVIDLLSSVPPSSGTSNDKVDKDNADQAAAALSTEARAQASVAKLREGLAGLDVQGLIRAFRQAQEERAQAYQRFDEGLNKVLASRAFAEYDGLCAEATAGFAALSNLVNAVEHCLGAAPHERKVLAGLLRRVQTEEKEKLSLTAALHLETFRLATAVAGTTPMGGVSDGEGGAGAGEMTERDGREEMLLREGIKALDVRIGEVKGRINEILEELRYEVEEE 263 +QP T + PLG V +S+P D D A E R + ++RE + +DV L+R QAQ++R AY+ FD GL VLAS Y LCA+ATA F+ LS+ +N++ CL H R A + ++Q +E EKL+LTAA HLE RL A EGGA D R LLREGIK LD ++ +V IN+ +EELR +E Sbjct: 53 DQPSTDADRAGPPGPLGGV--SAASLPADPAVPETMSDDDRRKHDAMKADRERRGK----EIREHMRTMDVADLLRLVFQAQQDRVAAYKVFDSGLETVLASGNITSYPALCAKATATFSVLSDTINSIRSCL-REQHGRTDAARAVEQLQKKEGEKLNLTAAAHLERLRLRNAQV-----------EGGA---RDNGEDERTAALLREGIKTLDGKVAKVVEEINDCIEELRCIAADE 270
BLAST of NO22G00870 vs. NCBI_GenBank
Match: XP_002289324.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92861.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 92.8 bits (229), Expect = 1.700e-15 Identity = 72/211 (34.12%), Postives = 108/211 (51.18%), Query Frame = 0 Query: 52 SSGTSNDKVDKDNADQAAAALSTEARAQASVAKLREGLAGLDVQGLIRAFRQAQEERAQAYQRFDEGLNKVLASRAFAEYDGLCAEATAGFAALSNLVNAVEHCLGAAPHERKVLAGLLRRVQTEEKEKLSLTAALHLETFRLATAVAGTTPMGGVSDGEGGAGAGEMTERDGREEMLLREGIKALDVRIGEVKGRINEILEELRYEVEEE 263 + S+ + KD + + R + A+++ L ++V L+ AQ+ER Y+ FDEGL+ +L S Y LCA+ TA F+ LS+ +N V+ L HER + G++ ++Q E EKL+LTAALHLE RL + G G +GE T R LL+ GI++L+ +I INE+LEELR +E Sbjct: 79 NGNASDATIAKDEEEDKKHETMKQERVKRG-AEIQSTLQSMNVSDLLGMIFGAQQERVTTYKLFDEGLSTILCSGNITTYPALCAKVTASFSVLSDTINGVKSSL-VDNHERTDIGGVISQLQKHESEKLNLTAALHLERLRLKNSELGV----------GTDDSGENTLR------LLKGGIQSLESKIATAVESINEVLEELRCIAADE 271
BLAST of NO22G00870 vs. NCBI_GenBank
Match: GAX09968.1 (hypothetical protein FisN_11Lh043 [Fistulifera solaris]) HSP 1 Score: 92.8 bits (229), Expect = 1.700e-15 Identity = 80/263 (30.42%), Postives = 126/263 (47.91%), Query Frame = 0 Query: 1 MDLKQCLAILSGRGVCEHGSHEHNQPHTSTASSKTT-EPLGQVIDLLSSVPPSSGTSNDKVDKDNADQAAAALSTEARAQASVAKLREGLAGLDVQGLIRAFRQAQEERAQAYQRFDEGLNKVLASRAFAEYDGLCAEATAGFAALSNLVNAVEHCLGAAPHERKVLAGLLRRVQTEEKEKLSLTAALHLETFRLATAVAGTTPMGGVSDGEGGAGAGEMTERDGREEMLLREGIKALDVRIGEVKGRINEILEELRYEVEEE 263 +D++Q L ILS RG +H + P LGQ I L+ S + + D + +S E + + ++ E L L+ + LI+ F +AQE+R Q Y+ +D+GL+++L + EY LC E TA F+ LS+ +N + L E+ +A L+ ++Q +E+ KL+LTAALHLE R+ A D R LL EG +L ++ E INEI++ELR + +E Sbjct: 16 IDIRQALDILSARG--DHAGPLRDGPQCGCCEKPPNFASLGQTIQLVDS---DNNEHSKTADLQEMEDLKKKVSEERAKRRN--EMEEKLGSLNKEELIKCFFEAQEQRVQTYRLYDQGLDRILETGQIHEYPSLCTETTATFSVLSDSINNIRKVL-LEKLEQTSVAELITQLQDKERTKLNLTAALHLERIRIHNQQAS----------------------DDRITKLLMEGAASLRAQMRENIEEINEIMDELRCSLMDE 248
BLAST of NO22G00870 vs. NCBI_GenBank
Match: GAX14496.1 (hypothetical protein FisN_11Hh043 [Fistulifera solaris]) HSP 1 Score: 89.7 bits (221), Expect = 1.400e-14 Identity = 79/263 (30.04%), Postives = 131/263 (49.81%), Query Frame = 0 Query: 1 MDLKQCLAILSGRGVCEHGSHEHNQPHTSTASSKTT-EPLGQVIDLLSSVPPSSGTSNDKVDKDNADQAAAALSTEARAQASVAKLREGLAGLDVQGLIRAFRQAQEERAQAYQRFDEGLNKVLASRAFAEYDGLCAEATAGFAALSNLVNAVEHCLGAAPHERKVLAGLLRRVQTEEKEKLSLTAALHLETFRLATAVAGTTPMGGVSDGEGGAGAGEMTERDGREEMLLREGIKALDVRIGEVKGRINEILEELRYEVEEE 263 +D++Q L ILS RG +H + P LGQ I L+ S ++G++ D + ++ +E RA+ ++ E L+ L+ + L++ F +AQE+R + Y+ +D+GL ++L + EY LC E TA F+ LS+ +N + L ++ +A L+ ++Q +E+ KL+LTAALHLE R+ A D R LL EG +L ++GE IN I++ELR + +E Sbjct: 14 IDIRQALEILSARG--DHTGPIRDGPRCGCCEKPPNFASLGQTIQLIDS--ENNGSTTDLQEIEDLRNKV----SEERAKRR-NEMEEKLSSLNKEELMKCFFEAQEQRVKTYRLYDQGLERILKTGQIHEYPSLCTETTATFSVLSDSINNIRKVL-LETLKQTSIADLIAQLQDKERTKLNLTAALHLERIRIQNQQAS----------------------DDRITKLLVEGAASLRSQMGENVEEINGIMDELRCSLVDE 244
BLAST of NO22G00870 vs. NCBI_GenBank
Match: XP_012201857.1 (hypothetical protein SPRG_07005 [Saprolegnia parasitica CBS 223.65] >KDO27417.1 hypothetical protein SPRG_07005 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 80.9 bits (198), Expect = 6.600e-12 Identity = 75/263 (28.52%), Postives = 110/263 (41.83%), Query Frame = 0 Query: 1 MDLKQCLAILSGRGVCEHGSHEHNQPHTST--ASSKTTEPLGQVIDLLSSVPPSSGTSNDKVDKDNADQAAAALSTEARAQASVAKLREGLAGLDVQGLIRAFRQAQEERAQAYQRFDEGLNKVLASRAFAEYDGLCAEATAGFAALSNLVNAVEHCLGAAPHERKVLAGLLRRVQTEEKEKLSLTAALHLETFRLATAVAGTTPMGGVSDGEGGAGAGEMTERDGREEMLLREGIKALDVRIGEVKGRINEILEELRYEVEE 262 MDL CL IL R C+HG HE + H +T A + + L + L SSVP + L +GL AF + Q +R + Y RF+ G +++ FA + E T FAA+S +N +E L A + LA L+R+VQ +EKEKL LT+AL LE R + T D + I++++ ++ INE+L E++YEV E Sbjct: 1 MDLDACLDILKARHGCDHGDHEEHANHQATPCAVANVKQTLAHDLHLESSVP------------------------------------DDLYATTTRGLYDAFMRCQSKRVEIYARFETGFVELMFKDEFAVFS---QEITKHFAAVSAEINRIEATLRA--RDATTLATLIRKVQVQEKEKLLLTSALLLERMR-----------------------SKQTRDDDVSASIYETSIRSMEGTHTKIIEAINELLVEMQYEVAE 199
BLAST of NO22G00870 vs. NCBI_GenBank
Match: OEU14728.1 (hypothetical protein FRACYDRAFT_269653 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 78.2 bits (191), Expect = 4.300e-11 Identity = 62/186 (33.33%), Postives = 86/186 (46.24%), Query Frame = 0 Query: 85 LREGLAGLDVQGLIRAFRQAQEERAQAYQRFDEGLNKVLASRAFAEYDGLCAEATAGFAALSNLVNAVEHCLGAA-----PHERKVLAGLLRRV---QTEEKEKLSLTAALHLETFRLATAVAGTTPMGGVSDGEGGAGAGEMTERDGREEMLLREGIKALDVRIGEVKGRINEILEELRYEVEEE 263 LRE L L + +R + QE+R +AY FD+ L VL SR +Y C ATA F+ LS+ V A+ + E+K ++R + Q+ E+EKL LTAA HLE R A + + D RE LL G L RI K IN+IL++LR + E+ Sbjct: 112 LRESLRDLPIVDFLRMVLKCQEDRVKAYIHFDQKLKTVLLSRKLTDYPPACLSATAAFSVLSDTVMAIRDEVSTRIENKNDTEKKFETSIVRSICELQSSEREKLQLTAAFHLECLR----------------------ASNLKQEDQRELQLLNSGQADLRSRIETCKTNINDILDDLRCGLTEK 275
BLAST of NO22G00870 vs. NCBI_GenBank
Match: XP_008868831.1 (hypothetical protein H310_05786 [Aphanomyces invadans] >ETW02226.1 hypothetical protein H310_05786 [Aphanomyces invadans]) HSP 1 Score: 73.6 bits (179), Expect = 1.100e-9 Identity = 77/264 (29.17%), Postives = 118/264 (44.70%), Query Frame = 0 Query: 1 MDLKQCLAILSGRGVCEHGSHEHNQPHTSTASSKTTEPLGQVIDLLSSVPPSSGTSNDKVDKDNADQAAAALSTEARAQASVAKLREGLAGLDVQGLIRAFRQAQEERAQAYQRFDEGLNKVLASRAFAEYDGLCAEATAGFAALSNLVNAVEHCLGAAPHERKV---LAGLLRRVQTEEKEKLSLTAALHLETFRLATAVAGTTPMGGVSDGEGGAGAGEMTERDGREEMLLREGIKALDVRIGEVKGRINEILEELRYEVEE 262 MD+++CL ILS R +H +HE + H TA E + +DL KVD D AL E L + V+ L+ FR QE+R YQ+F++G + + + + ++ T FA++SN +NA+E L R+V + ++R+VQ EEKEKL LT+AL LE RL V+ T D L I+++ + RIN++L +L YE+E+ Sbjct: 1 MDVQKCLDILSARVETKH-THEGDDEHHHTAC--VEENASRCLDL-------------KVD----DALNPALEPE-------------LETMSVRELVTTFRSCQEQRVHVYQQFEKGFLEHMFTDSLPQFS---QNITKQFASISNQINAIESSL----RTRQVPLSIPSIMRKVQGEEKEKLLLTSALLLEKMRLKRQVS--------------------TNPDDSSVSLFESSIESMQSTHTAIIERINDLLTDLLYEMED 204 The following BLAST results are available for this feature:
BLAST of NO22G00870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G00870 ID=NO22G00870|Name=NO22G00870|organism=Nannochloropsis oceanica|type=gene|length=947bpback to top protein sequence of NO22G00870.1 >NO22G00870.1-protein ID=NO22G00870.1-protein|Name=NO22G00870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=263bpback to top Synonyms
Publications
|