NO22G00690, NO22G00690 (gene) Nannochloropsis oceanica

Overview
NameNO22G00690
Unique NameNO22G00690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2090
Alignment locationchr22:233270..235359 +

Link to JBrowse

Properties
Property NameValue
DescriptionLUC7 related protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:233270..235359 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003729mRNA binding
GO:0003729mRNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006376mRNA splice site selection
GO:0006376mRNA splice site selection
Vocabulary: Cellular Component
TermDefinition
GO:0005685U1 snRNP
GO:0005685U1 snRNP
Vocabulary: INTERPRO
TermDefinition
IPR004882Luc7-rel
Homology
[Close]
BLAST of NO22G00690 vs. NCBI_GenBank
Match: CCA22856.1 (unknown protein putative [Albugo laibachii Nc14])

HSP 1 Score: 159.1 bits (401), Expect = 3.300e-35
Identity = 103/325 (31.69%), Postives = 142/325 (43.69%), Query Frame = 0 
Query:   14 VDAQRAMLDEMMGMNRNLDNPDAEIADYRDERVCKQFLLGCCPHEVFSKTKIDLGQCERLHDEGLQQKFEADLKKEEEEWEGGREGGPVAEDRKRYERDLEMVLREYIYEADRKIARGRRRTDVPIGEXXXXXXXXXXXXXXXXXXXXXXXXXGVGTLGVGGREGGRSDLSSNPEILRLQGEIEEVLAKAEAAGEXXXXXXXXXXXXXXXXXXXXXXXIQERLLAEGIEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRVCDVCGAFLSISDNDKRLADHFGGKLHLGYVLLREKMKEIQD 339
            +DAQRA+LDE+MG NR+ D P+ EI DYRD RVCK FL G CPHE+F  TK+DLG+C +LH   L+ K+E D KK                    YE +LE  L  +I + D+KI R ++R +                                     G +     D+ +  E+L +  EI+EV+ KAE AG                         Q   + + ++                                                   +LRVCDVCGAFLSI D+D+RLA+HFGGKLHLGY+ +R+K++EI +
Sbjct:    1 MDAQRALLDELMGRNRDGDKPNDEIKDYRDRRVCKYFLCGLCPHELFQNTKMDLGECPKLHIPNLRTKYEKDPKKS-----------------SGYEYELERELLRFISDLDKKIYRAQKRLEEQ----------------------------------EGSKAPSLMDVENCKEVLEITAEIQEVMLKAEEAGNEGQVDLSMELMEKVEDLKQKKADAQANAMLQSVQ--------------GVGARPPDYRKGGLEMKAPGLSELLPRNPLASTDVNQKLRVCDVCGAFLSIFDSDRRLANHFGGKLHLGYLQIRKKVEEIAE 260
[Close]
BLAST of NO22G00690 vs. NCBI_GenBank
Match: XP_008621307.1 (hypothetical protein SDRG_16862 [Saprolegnia diclina VS20] >EQC25255.1 hypothetical protein SDRG_16862 [Saprolegnia diclina VS20])

HSP 1 Score: 152.9 bits (385), Expect = 2.400e-33
Identity = 99/325 (30.46%), Postives = 146/325 (44.92%), Query Frame = 0 
Query:   14 VDAQRAMLDEMMGMNRNLDNPDAEIADYRDERVCKQFLLGCCPHEVFSKTKIDLGQCERLHDEGLQQKFEADLKKEEEEWEGGREGGPVAEDRKRYERDLEMVLREYIYEADRKIARGRRRTDVPIGEXXXXXXXXXXXXXXXXXXXXXXXXXGVGTLGVGGREGGRSDLSSNPEILRLQGEIEEVLAKAEAAGEXXXXXXXXXXXXXXXXXXXXXXXIQERLLAEGIEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRVCDVCGAFLSISDNDKRLADHFGGKLHLGYVLLREKMKEIQD 339
            +DAQRA+LDE+MG NR+ D P  +I D+RD+RVCK+FL G CPH++F  TK+D+G+C +LH   L+  +E D  K + ++               YE DLE  L  Y+ + ++KI+R  +R D                                     G R     D+ +N E+L +  EI E++ KAE AG                        +  ++ A  I+K                                                  +LRVCD+CGAFLSI D+D+RLADHFGGK+HLGY+ +R+K+ E+++
Sbjct:    1 MDAQRALLDELMGRNRDGDKPQEDIRDFRDQRVCKRFLCGLCPHDLFQNTKMDMGECPKLHLPKLKLAYEEDRAKNQRDY--------------GYEADLERELVRYVSDVEKKISRALKRLDEQ----------------------------------DGARVSSMLDIENNKEVLEITAEIAELMQKAEDAGN--------------EGEVDLSMELMAKVEALKIKKA---ALQGVPSAVLATTAGADALMPEVDVAQATLMAVLPGNPLAMTNVNQKLRVCDMCGAFLSIFDSDRRLADHFGGKMHLGYMQIRKKIVEMRE 260
[Close]
BLAST of NO22G00690 vs. NCBI_GenBank
Match: XP_012210628.1 (hypothetical protein SPRG_16021 [Saprolegnia parasitica CBS 223.65] >KDO18664.1 hypothetical protein SPRG_16021 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 152.5 bits (384), Expect = 3.100e-33
Identity = 98/325 (30.15%), Postives = 146/325 (44.92%), Query Frame = 0 
Query:   14 VDAQRAMLDEMMGMNRNLDNPDAEIADYRDERVCKQFLLGCCPHEVFSKTKIDLGQCERLHDEGLQQKFEADLKKEEEEWEGGREGGPVAEDRKRYERDLEMVLREYIYEADRKIARGRRRTDVPIGEXXXXXXXXXXXXXXXXXXXXXXXXXGVGTLGVGGREGGRSDLSSNPEILRLQGEIEEVLAKAEAAGEXXXXXXXXXXXXXXXXXXXXXXXIQERLLAEGIEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRVCDVCGAFLSISDNDKRLADHFGGKLHLGYVLLREKMKEIQD 339
            +DAQRA+LDE+MG NR+ D P  +I D+RD+RVCK+FL G CPH++F  TK+D+G+C +LH   L+  +E D  K + ++               YE DLE  L  Y+ + ++KI+R  +R D                                     G R     D+ +N E+L +  EI E++ KAE AG                        +  ++ A  ++K                                                  +LRVCD+CGAFLSI D+D+RLADHFGGK+HLGY+ +R+K+ E+++
Sbjct:    1 MDAQRALLDELMGRNRDGDKPQEDIRDFRDQRVCKRFLCGLCPHDLFQNTKMDMGECPKLHLPKLKLAYEEDRAKNQRDY--------------GYEADLERELVRYVSDVEKKISRALKRLDEQ----------------------------------DGARVSSMLDIENNKEVLEITAEIAELMQKAEDAGN--------------EGEVDLSMELMAKVEALKVKKA---ALQGVPSAVLASTAGADALMPEVDVAQATLMAVLPGNPLAMTNVNQKLRVCDMCGAFLSIFDSDRRLADHFGGKMHLGYMQIRKKIVEMRE 260
[Close]
BLAST of NO22G00690 vs. NCBI_GenBank
Match: GAY06253.1 (Hypothetical protein PINS_014058 [Pythium insidiosum])

HSP 1 Score: 152.5 bits (384), Expect = 3.100e-33
Identity = 104/325 (32.00%), Postives = 143/325 (44.00%), Query Frame = 0 
Query:   14 VDAQRAMLDEMMGMNRNLDNPDAEIADYRDERVCKQFLLGCCPHEVFSKTKIDLGQCERLHDEGLQQKFEADLKKEEEEWEGGREGGPVAEDRKRYERDLEMVLREYIYEADRKIARGRRRTDVPIGEXXXXXXXXXXXXXXXXXXXXXXXXXGVGTLGVGGREGGRSDLSSNPEILRLQGEIEEVLAKAEAAGEXXXXXXXXXXXXXXXXXXXXXXXIQERLLAEGIEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRVCDVCGAFLSISDNDKRLADHFGGKLHLGYVLLREKMKEIQD 339
            +DAQRA+LDE+MG NR+ D P+ EI +YRD+RVCK+FL G CPH++F  TK+DLG+C +LH   L   +E+D K      + G            YE +LE  L + I + ++KIAR ++R +   GE                                  R     D+ +  E+L +  EI+EV+ KAE AG                         Q   +   I                                                    +LRVCDVCGAFLSI D+D+RLADHFGGKLHLGY+ +R+K+ EI +
Sbjct:  194 MDAQRALLDELMGKNRDGDRPEEEITNYRDKRVCKRFLCGLCPHDLFQNTKMDLGECAQLHLPKLLAAYESD-KAANPNLDLG------------YEMELEKDLVKIISDVEKKIARAQKRLEEQDGE----------------------------------RAPSLMDVENCKEVLEITAEIQEVMQKAEEAGNEGEVDLSMELMQKVEELQQKKAEAQANAMIRSIRPA----------------------APKETGENGDTDGAKSAADAKASSVNQKLRVCDVCGAFLSIFDSDRRLADHFGGKLHLGYLQIRKKITEIAE 449
[Close]
BLAST of NO22G00690 vs. NCBI_GenBank
Match: XP_009839335.1 (hypothetical protein H257_13494 [Aphanomyces astaci] >ETV71089.1 hypothetical protein H257_13494 [Aphanomyces astaci])

HSP 1 Score: 152.1 bits (383), Expect = 4.000e-33
Identity = 97/324 (29.94%), Postives = 144/324 (44.44%), Query Frame = 0 
Query:   14 VDAQRAMLDEMMGMNRNLDNPDAEIADYRDERVCKQFLLGCCPHEVFSKTKIDLGQCERLHDEGLQQKFEADLKKEEEEWEGGREGGPVAEDRKRYERDLEMVLREYIYEADRKIARGRRRTDVPIGEXXXXXXXXXXXXXXXXXXXXXXXXXGVGTLGVGGREGGRSDLSSNPEILRLQGEIEEVLAKAEAAGEXXXXXXXXXXXXXXXXXXXXXXXIQERLLAEGIEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRVCDVCGAFLSISDNDKRLADHFGGKLHLGYVLLREKMKEIQ 338
            +DAQRA+LDE+MG NR+ D P+ +I+D+RD RVCK+FL G CPH++F  TK+D+G+CE+LH   L+  ++A+  K      G             YE DL   L  Y+ + ++KIAR ++R +                                     G R    +D+ S+ E+L +  EI +++ KAE AG                        +Q    +     G                                                 +LRVCD+CGAFLSI D+D+RLADHFGGK+HLGY+ +R+K+ E++
Sbjct:    1 MDAQRALLDELMGRNRDGDKPEEDISDFRDTRVCKRFLCGLCPHDLFQNTKMDMGECEKLHLPKLKVAYDAEKSKPHSRDYG-------------YENDLLRELERYVSDVEKKIARAQKRLEEQ----------------------------------EGARPPTLADIESSKEVLEITAEIADLMQKAEDAGNEGEVDLSMELMAQVEVLKLKKNAVQANPSSSDSSGG---------------ASAPTPVVNEYDATQLHLMNVLPGNPLAMTNVNNKLRVCDMCGAFLSIFDSDRRLADHFGGKMHLGYMQIRKKIAEMK 262
[Close]
BLAST of NO22G00690 vs. NCBI_GenBank
Match: OQR90192.1 (RNA-binding protein Luc7-like 2-like isoform X1 [Thraustotheca clavata])

HSP 1 Score: 148.3 bits (373), Expect = 5.800e-32
Identity = 98/325 (30.15%), Postives = 147/325 (45.23%), Query Frame = 0 
Query:   14 VDAQRAMLDEMMGMNRNLDNPDAEIADYRDERVCKQFLLGCCPHEVFSKTKIDLGQCERLHDEGLQQKFEADLKKEEEEWEGGREGGPVAEDRKRYERDLEMVLREYIYEADRKIARGRRRTDVPIGEXXXXXXXXXXXXXXXXXXXXXXXXXGVGTLGVGGREGGRSDLSSNPEILRLQGEIEEVLAKAEAAGEXXXXXXXXXXXXXXXXXXXXXXXIQERLLAEGIEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRVCDVCGAFLSISDNDKRLADHFGGKLHLGYVLLREKMKEIQD 339
            +DAQRA+LDE+MG NR+ D P  +I D+RD RVCK++L G CPH++F  T++DLG C +LH   L+  +E D  + + ++               YE +LE  L  Y+ + ++KIA+  +R +   G                           V TL          D+ +N E+L+L  EI E++ KAE AG                         Q++   +G+                                                    +LRVCD+CGAFLSI D+D+RLADHFGGKLHLGY+ +R+K++E+++
Sbjct:    1 MDAQRALLDELMGRNRDGDRPQEDIRDFRDARVCKRYLCGLCPHDLFQNTRLDLGDCPKLHLPKLKLAYEEDRARTKRDY--------------GYEAELERELVRYVTDVEKKIAKALKRLEEQDGAR-------------------------VTTL---------IDVENNKEVLQLTAEIAELMQKAEDAGNEGEVDLSLKLMAQIEVLK------QKKAAMQGVTPS------------ASASTSGEAIISEYDIAQLNLMQVLPGNPLAMTNVNQKLRVCDMCGAFLSIFDSDRRLADHFGGKLHLGYMQIRKKIQEMRE 259
[Close]
BLAST of NO22G00690 vs. NCBI_GenBank
Match: CBN79656.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 129.0 bits (323), Expect = 3.700e-26
Identity = 75/208 (36.06%), Postives = 112/208 (53.85%), Query Frame = 0 
Query:    1 MGKWGGRAGPLSGVDAQRAMLDEMMGMNRNLDNPDAEIADYRDERVCKQFLLGCCPHEVFSKTKIDLGQCERLHDEGLQQKFEADLKKEEEEWEGGREGGPVAEDRKRYERDLEMVLREYIYEADRKIARGRRRTDVPIGEXXXXXXXXXXXXXXXXXXXXXXXXXGVGTLGVGGREGGRSDLSSNPEILRLQGEIEEVLAKAEAAGE 209
            MGKW  R    S +D+QRA+LDE+MG+NRNLDN +  + D++DERVCK +L G CPH++FS TK DLG C+ LHDE L++++EAD+ K E+                 Y++ LE +L  +I E D+KI+R +RR +                                   G G      + L +N EI++++ ++ E++  AEA GE
Sbjct:    1 MGKW--RDSKPSQMDSQRALLDELMGVNRNLDNEEGVVDDFKDERVCKAYLCGLCPHDLFSNTKQDLGACDYLHDEELKRQYEADVAKGED---------------YGYDKHLESILVNHIQEVDKKISRSQRRLEEG---------------------------------GQGAMAMDTASLRNNEEIMKMEVQMSEIMKNAEAKGE 158
[Close]
BLAST of NO22G00690 vs. NCBI_GenBank
Match: XP_024584669.1 (Spliceosome subunit [Plasmopara halstedii] >CEG48300.1 Spliceosome subunit [Plasmopara halstedii])

HSP 1 Score: 121.7 bits (304), Expect = 5.800e-24
Identity = 94/327 (28.75%), Postives = 133/327 (40.67%), Query Frame = 0 
Query:   14 VDAQRAMLDEMMGMNRNLDNP-DAEIADYRDERVCKQFLLGCCPHEVFSKTKIDLGQCERLHDEGLQQKFEADLKKEEEEWEGGREGGPVAEDRKRYERDLEMVLREYIYEADRKIARGRRRTDVPIGEXXXXXXXXXXXXXXXXXXXXXXXXXGVGTLGVGGREGGRSDLSSNPEILRLQGEIEEVLAKAEAAGEXXXXXXXXXXXXXXXXXXXXXXXIQERLLAEGIEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRVCDVCGAFLSISDNDKRLADHFGGKLHLGYVLLREKMKEIQDR 340
            +DAQRA+LD +MG+NR+ D P D    ++R  +VCK +L G CP  +F  T++D G CE LH   L+  +E +  KE                  RYERDL   L + + + ++KIAR +RR                                          +GG S      +IL+L  +++E  A+AE A +                        Q     E +E                                                   +LRVCDVCGAFLSI D++KRLADHFGGKLH+GYV +R K+KE+ ++
Sbjct:    1 MDAQRALLDSLMGINRDGDRPNDDACTNFRHPKVCKLYLCGLCPRSLFQNTRLDSGPCEFLHLPTLRSAYEEERTKES----------------FRYERDLISELSKLLADVEKKIARAQRRLT---------------------------------------EDGGES--QDKKQILQLTQDMQEAAAQAEQAAKDGDAD-------------------QSLRSLENVE-------------------------LFKQKRREVLRQNNLGATNLVDSVNQKLRVCDVCGAFLSIFDSEKRLADHFGGKLHVGYVQIRRKLKELVEK 226
[Close]
BLAST of NO22G00690 vs. NCBI_GenBank
Match: ETK84048.1 (hypothetical protein L915_10934 [Phytophthora parasitica] >ETL37482.1 hypothetical protein L916_10831 [Phytophthora parasitica])

HSP 1 Score: 120.2 bits (300), Expect = 1.700e-23
Identity = 93/327 (28.44%), Postives = 137/327 (41.90%), Query Frame = 0 
Query:   14 VDAQRAMLDEMMGMNRNLDNPDAEIA-DYRDERVCKQFLLGCCPHEVFSKTKIDLGQCERLHDEGLQQKFEADLKKEEEEWEGGREGGPVAEDRKRYERDLEMVLREYIYEADRKIARGRRRTDVPIGEXXXXXXXXXXXXXXXXXXXXXXXXXGVGTLGVGGREGGRSDLSSNPEILRLQGEIEEVLAKAEAAGEXXXXXXXXXXXXXXXXXXXXXXXIQERLLAEGIEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRVCDVCGAFLSISDNDKRLADHFGGKLHLGYVLLREKMKEIQDR 340
            +DAQRA+LD +MG+NR+ D PD +   D+R  RVCK +L G CP E+F  T++DLG C+ LH   L+  +        EE +  R+ G        YER+L   L   + + ++KIAR +RR                                          E G  D  +  +IL+L  +I++  A+AE A +                        +   + E +E                                                   +LRVCDVCGAFLSI D+++RLADHFGGK+H+GYV +R K+KE+ ++
Sbjct:    1 MDAQRALLDSLMGLNRDGDRPDDDATMDFRHPRVCKPYLCGLCPRELFQNTRLDLGTCKSLHLPTLRLAY--------EEKKSTRDFG--------YERELANELSRLLADVEKKIARAQRRL----------------------------------------AEDG-DDEQARAQILQLTQDIQDAAAQAEKAAKEGNAD-------------------RSLSMMEKVE-------------------------MLKQKRRELLRQSNPGTSNAVDNVNQKLRVCDVCGAFLSIFDSERRLADHFGGKVHVGYVQIRRKLKELMEK 226
[Close]
BLAST of NO22G00690 vs. NCBI_GenBank
Match: ETO72708.1 (hypothetical protein F444_11275 [Phytophthora parasitica P1976])

HSP 1 Score: 119.4 bits (298), Expect = 2.900e-23
Identity = 93/327 (28.44%), Postives = 137/327 (41.90%), Query Frame = 0 
Query:   14 VDAQRAMLDEMMGMNRNLDNPDAEIA-DYRDERVCKQFLLGCCPHEVFSKTKIDLGQCERLHDEGLQQKFEADLKKEEEEWEGGREGGPVAEDRKRYERDLEMVLREYIYEADRKIARGRRRTDVPIGEXXXXXXXXXXXXXXXXXXXXXXXXXGVGTLGVGGREGGRSDLSSNPEILRLQGEIEEVLAKAEAAGEXXXXXXXXXXXXXXXXXXXXXXXIQERLLAEGIEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLRVCDVCGAFLSISDNDKRLADHFGGKLHLGYVLLREKMKEIQDR 340
            +DAQRA+LD +MG+NR+ D PD +   D+R  RVCK +L G CP E+F  T++DLG C+ LH   L+  +        EE +  R+ G        YER+L   L   + + ++KIAR +RR                                          E G  D  +  +IL+L  +I++  A+AE A +                        +   + E +E                                                   +LRVCDVCGAFLSI D+++RLADHFGGK+H+GYV +R K+KE+ ++
Sbjct:    1 MDAQRALLDSLMGLNRDGDRPDDDATMDFRHPRVCKPYLCGLCPRELFQNTRLDLGTCKSLHLPTLRLAY--------EEKKSTRDFG--------YERELANELSRLLADVEKKIARAQRRL----------------------------------------AEDG-DDEQAPAQILQLTQDIQDAAAQAEKAAKEGNAD-------------------RSLSMMEKVE-------------------------MLKQKRRELLRQSNPGTSNAVDNVNQKLRVCDVCGAFLSIFDSERRLADHFGGKVHVGYVQIRRKLKELMEK 226
The following BLAST results are available for this feature:
BLAST of NO22G00690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CCA22856.13.300e-3531.69unknown protein putative [Albugo laibachii Nc14][more]
XP_008621307.12.400e-3330.46hypothetical protein SDRG_16862 [Saprolegnia dicli... [more]
XP_012210628.13.100e-3330.15hypothetical protein SPRG_16021 [Saprolegnia paras... [more]
GAY06253.13.100e-3332.00Hypothetical protein PINS_014058 [Pythium insidios... [more]
XP_009839335.14.000e-3329.94hypothetical protein H257_13494 [Aphanomyces astac... [more]
OQR90192.15.800e-3230.15RNA-binding protein Luc7-like 2-like isoform X1 [T... [more]
CBN79656.13.700e-2636.06conserved unknown protein [Ectocarpus siliculosus][more]
XP_024584669.15.800e-2428.75Spliceosome subunit [Plasmopara halstedii] >CEG483... [more]
ETK84048.11.700e-2328.44hypothetical protein L915_10934 [Phytophthora para... [more]
ETO72708.12.900e-2328.44hypothetical protein F444_11275 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL033nonsL033Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004199NSK004199Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G00690.1NO22G00690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672082gene_7067Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G00690.1NO22G00690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G00690 ID=NO22G00690|Name=NO22G00690|organism=Nannochloropsis oceanica|type=gene|length=2090bp
ACAGGCATTCTAGCTTTCCATAAGAGGAAGGGCCAGACGAGTCGAGGCAC
ATTTGTCTTCTAGCCAGGGAGGAGCTCGATCTCAAAGACCAGAGGAGGCC
AAGGAGCCATTCTCGTCAAGTCGGCCCCAATTGCAACAGCATCAGCATCG
CTCACCACCACTCCCACTGCGATTCCAGCCAGCAGCAGCAGTACGACGAT
ACACGATGGGTAAATGGGGAGGCCGCGCGGGACCTCTGTCGGGTGTGGAC
GCCCAACGGGCCATGCTTGACGAGATGATGGGCATGAATCGTAACCTGGA
CAACCCGGACGCGGAGATTGCGGACTATCGCGACGAGgtacgtcttctgg
tagcatgtgcccatcccttttaaatctatttctacaccttggctctgggt
agacaagccttttgggatagcgctacgtgcctgccggtcttgcttcccct
ctccacttcacaccaacccctttccccatacagCGCGTCTGCAAGCAGTT
TCTCCTCGGTTGCTGCCCGCACGAAGTCTTCAGCAAGACCAAAATCGATC
TCGGGCAATGCGAGCGCCTCCATGACGAAGGCCTGCAACAGAAATTTGAA
GCCGACCTGAAGAAGGAAGAGGAGGAATGGGAGGGAGGGAGGGAGGGAGG
GCCCGTGGCAGAGGACAGGAAGAGGTATGAGAGAGACTTGGAAATGGTGT
TACGAGAGTATATTTATGAGGCGGATAGGAAGATAGCGAGGGGCCGGAGG
AGGACAGACGTTCCGATTGGTGAGCAGCAGCAGCAACAGCAGCATGAACA
GCGCGAGCCGCTATCGTCGCAGCATCAACAGCTGGGAGGAGGAGGAGTTG
GGGTGGGTACGCTTGGAGTAGGAGGAAGGGAGGGGGGAAGAAGTGACTTG
TCGTCGAATCCGGAGATACTGAGATTACAGGGAGAGATCGAGGAGGTGCT
GGCCAAGGCAGAGGCAGCGGGGGAGGAAGGGGAGGTGGATGAAGCGCAGG
AGTTGAGCGAAAAAGCAGAAGAACTCAAGAGGCAGAAAAATAAAATTCAA
GAAAGGTTGCTTGCGGAGGGTATTGAGAAAGGAGGGATGGGAGGGAGAGA
GGGAGGGCATCCAGGAGCGAAGGGCCCTGGTGGTATTCCATCCCTCCCTC
CTACCTCCACAGCTGCGACCACCGCTCCTGCTAATGCTGCCGCTCCTTCT
TCGTCATCGTCGTCGTCGGACCCGAACCAAAGGTTGCGGGTGTGTGATGT
ATGTGGAGCGTTTCTATCCATCAGTGACAACGACAAGCGACTGGCCGACC
ATTTCGGAGGGAAGTTGCACTTGGGCTATGTCCTGTTGAGGGAGAAGATG
AAGGAGATCCAGGACAGAAGGAGGGAAGGGGGGAAAAGGAGGGGAAGGGA
TGGGGGGGGTTCGGATGGTCCTGAAGGGGGCAGTTGGGGGGGAAGAGGAG
GAGGAGGAGGGGGGAGGGAGCGAGGTGGGAGGGGGAGGAGTGGAAGTAGG
GAGAGGGAGCGAAGAGGGGGACGGAGCAGGAGCAGGAGTCGGGAGAGGGG
GAGGGAGGGAGGGAGGGGAGGGAGGGATTATCGTGAAGATAGAGAGAGGG
AGCGTGGTGGAGGGGACAGGTATAGGGAAAGGGGGAGAGATCGAGATAAC
GGACGGGGAGGGAGGGATAGGAGTCGAAGCCGAAGTAGGGAGCGAGGAGG
GAGGAGGTATTGAGGGAAGAGGGTGAAGAGGAGCTGAGGGGTGAAAGGCA
CGGGAAAGCAGGGCTGGGTGGCATCAGTTGAGACCCAAAGTAACACGCAC
CGCAATGCGGACAACAACATTGAGGCGGGCGATACTACTACTTGAAAAGA
GAACGAAACAAATATGTCTGAAAGGCTCTATCTTTCTCGTCTATGTGCAT
GCGTTTAATTGGTGATAGAGTTGAGAGATTTTCCACACCAGCAGTCGTGG
CGTTCCCCGCTATCACCATGAGTCGACTTATGATGCGGAAATGATTTTGG
AAATACGCATTGAATGCTTTTTCCCTCGAAATGGAACGAAAACTCTCCAA
CAATAGAAGTGCTTGCATTTTACTCGAAATGCGCTACCAT
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protein sequence of NO22G00690.1

>NO22G00690.1-protein ID=NO22G00690.1-protein|Name=NO22G00690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=454bp
MGKWGGRAGPLSGVDAQRAMLDEMMGMNRNLDNPDAEIADYRDERVCKQF
LLGCCPHEVFSKTKIDLGQCERLHDEGLQQKFEADLKKEEEEWEGGREGG
PVAEDRKRYERDLEMVLREYIYEADRKIARGRRRTDVPIGEQQQQQQHEQ
REPLSSQHQQLGGGGVGVGTLGVGGREGGRSDLSSNPEILRLQGEIEEVL
AKAEAAGEEGEVDEAQELSEKAEELKRQKNKIQERLLAEGIEKGGMGGRE
GGHPGAKGPGGIPSLPPTSTAATTAPANAAAPSSSSSSSDPNQRLRVCDV
CGAFLSISDNDKRLADHFGGKLHLGYVLLREKMKEIQDRRREGGKRRGRD
GGGSDGPEGGSWGGRGGGGGGRERGGRGRSGSRERERRGGRSRSRSRERG
REGGRGGRDYREDRERERGGGDRYRERGRDRDNGRGGRDRSRSRSRERGG
RRY*
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