NO22G00510, NO22G00510 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G00510 vs. NCBI_GenBank
Match: XP_005854700.1 (hypothetical protein NGA_0347602 [Nannochloropsis gaditana CCMP526] >EKU21656.1 hypothetical protein NGA_0347602 [Nannochloropsis gaditana CCMP526] >EWM21388.1 hypothetical protein Naga_100215g6 [Nannochloropsis gaditana]) HSP 1 Score: 208.8 bits (530), Expect = 1.300e-50 Identity = 119/158 (75.32%), Postives = 129/158 (81.65%), Query Frame = 0 Query: 1 MTVKVCFSSLLLLG-LLSSALAFVPRQLVRTPRQQQRVQGRMQMALPQNALASLGLLLTASTGLYSPPSHASSLPSFSLNNQAFTSATLSKEVEVRQGMYGEYTVEKTGQQFENAEGTFKTKEETGENKNKYVAILAVLLIGSCVIPMAQYFWYVKDD 158 M+ K SSLL+L L +S AFVPRQL RTP QQR QGR+ MALP NA+ASLGLLLTASTGLY+P S P S +NQAFTS TLSKEVE RQGMY EYTVEKTGQQ+ENAEGTFKTK+ET NKNKYVAILAVLL+GSCVIPMAQYFWYVKDD Sbjct: 2 MSSKAFASSLLILSFLFASTWAFVPRQLTRTP-LQQRGQGRLHMALPGNAMASLGLLLTASTGLYAPSS-----PPPSFHNQAFTSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD 153
BLAST of NO22G00510 vs. NCBI_GenBank
Match: EWM21387.1 (hypothetical protein Naga_100215g6 [Nannochloropsis gaditana]) HSP 1 Score: 208.8 bits (530), Expect = 1.300e-50 Identity = 119/158 (75.32%), Postives = 129/158 (81.65%), Query Frame = 0 Query: 1 MTVKVCFSSLLLLG-LLSSALAFVPRQLVRTPRQQQRVQGRMQMALPQNALASLGLLLTASTGLYSPPSHASSLPSFSLNNQAFTSATLSKEVEVRQGMYGEYTVEKTGQQFENAEGTFKTKEETGENKNKYVAILAVLLIGSCVIPMAQYFWYVKDD 158 M+ K SSLL+L L +S AFVPRQL RTP QQR QGR+ MALP NA+ASLGLLLTASTGLY+P S P S +NQAFTS TLSKEVE RQGMY EYTVEKTGQQ+ENAEGTFKTK+ET NKNKYVAILAVLL+GSCVIPMAQYFWYVKDD Sbjct: 9 MSSKAFASSLLILSFLFASTWAFVPRQLTRTP-LQQRGQGRLHMALPGNAMASLGLLLTASTGLYAPSS-----PPPSFHNQAFTSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD 160
BLAST of NO22G00510 vs. NCBI_GenBank
Match: XP_002176725.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51188.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 85.1 bits (209), Expect = 2.100e-13 Identity = 49/111 (44.14%), Postives = 64/111 (57.66%), Query Frame = 0 Query: 47 QNALASLGLLLTASTGLYSPPSHASSLPSFSLNNQAFTSATLSKEVEVRQGMYGEYTVEKTGQQFENAEGTFKTKEETGENKNKYVAILAVLLIGSCVIPMAQYFWYVKDD 158 Q A A T +T S P+ + P FS +N T R+GMYGEYT + Q +++A TFK +ET K KY A+LAVL++GS +IPMAQYFWYV+DD Sbjct: 35 QKAAAGAFAAFTIATSSLSAPAADALTPVFSSSNVVAEKVT-------REGMYGEYTTDLV-QTYDDARSTFKDAKETKSKKGKYTALLAVLIVGSFIIPMAQYFWYVRDD 137
BLAST of NO22G00510 vs. NCBI_GenBank
Match: EJK77761.1 (hypothetical protein THAOC_00385 [Thalassiosira oceanica]) HSP 1 Score: 80.5 bits (197), Expect = 5.200e-12 Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = 0 Query: 48 NALASLGLLLTASTGLYSPPSHASSLPSFSLNNQAFTSATLSKEVEVRQGMYGEYTVEKTGQQFENAEGTFKTKEETGENKNKYVAILAVLLIGSCVIPMAQYFWYVKDD 158 NALA L AS + P + A + + + F S++L E R+G+YGEY V+ Q +++A FK+ +ET K KY A++AVL++GS +IPMAQYFWYV+DD Sbjct: 38 NALAGASL---ASALVVGPMADAVDMMA---DAPTFGSSSLVAERVKREGIYGEYEVDLGDQVYDDASSKFKSAKETKSKKGKYTALIAVLVVGSFIIPMAQYFWYVRDD 141
BLAST of NO22G00510 vs. NCBI_GenBank
Match: CBN73992.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 68.9 bits (167), Expect = 1.600e-8 Identity = 59/159 (37.11%), Postives = 82/159 (51.57%), Query Frame = 0 Query: 8 SSLLLLGLLSSALAFVPRQL------VRTPRQQQRVQG-RMQMALPQNALASLGLLLTASTGLYSPPSHASSLPSFSLNNQAFTSATLSKEVEVRQGMYGEYTVEKTGQQFENAEG--TFKTKEETGENKNKYVAILAVLLIGSCVIPMAQYFWYVKDD 158 SS L+LGL+ + AFV + V R G RM + + A A++ L+ ++ P H S S + A+ E R+G+YG Y VE + E G TFK KEET E ++KY ++LAVLL GS VIPM QY+WY++DD Sbjct: 7 SSGLVLGLVGCSQAFVTPPVTGLGGRVSAGRSAASASGPRMMLPMAPFAGAAVAHLIGSNP---INPEHLVSAKSQPTHLVAYK--------ETREGLYGPYEVEVQERAPETDFGISTFKKKEETEEGRDKYTSVLAVLLAGSFVIPMVQYWWYIRDD 154
BLAST of NO22G00510 vs. NCBI_GenBank
Match: GAX21772.1 (hypothetical protein FisN_31Lh061 [Fistulifera solaris]) HSP 1 Score: 68.6 bits (166), Expect = 2.000e-8 Identity = 38/103 (36.89%), Postives = 65/103 (63.11%), Query Frame = 0 Query: 47 QNALASLGLLLTASTGLYSPPSHASSLPSFSLNNQAFTSATLSKEVEVRQGMYGEYTVEKTGQQFENAEGTFKTKEETGENKNKYVAILAVLLIGSCVIPMAQ 150 Q A A T ++ + + P A+++P AF + L+++V +R+G+YGEY ++ Q++++A TFK+ +ET K KY A+LA+L++GS +IPMAQ Sbjct: 35 QKAAAGAFAAFTIASSVLTMPPAANAVP-------AFPTQVLAEKV-IREGVYGEYEIDLPEQKYDDARSTFKSAKETKTKKGKYTALLAILIVGSFIIPMAQ 129
BLAST of NO22G00510 vs. NCBI_GenBank
Match: GAX10853.1 (hypothetical protein FisN_31Hh061 [Fistulifera solaris]) HSP 1 Score: 65.5 bits (158), Expect = 1.700e-7 Identity = 37/103 (35.92%), Postives = 64/103 (62.14%), Query Frame = 0 Query: 47 QNALASLGLLLTASTGLYSPPSHASSLPSFSLNNQAFTSATLSKEVEVRQGMYGEYTVEKTGQQFENAEGTFKTKEETGENKNKYVAILAVLLIGSCVIPMAQ 150 Q A A T ++ + + A+++P AF + L+++V +R+G+YGEY ++ Q++++A TFK+ +ET K KY A+LA+L++GS +IPMAQ Sbjct: 34 QKAAAGAFAAFTIASSVLTMSPAANAVP-------AFPTQVLAEKV-IREGVYGEYEIDLPEQKYDDARSTFKSAKETKTKKGKYTALLAILIVGSFIIPMAQ 128
BLAST of NO22G00510 vs. NCBI_GenBank
Match: XP_002289546.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93083.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 63.9 bits (154), Expect = 5.000e-7 Identity = 53/148 (35.81%), Postives = 77/148 (52.03%), Query Frame = 0 Query: 3 VKVCFSSLLLLGLLSSALAFVPRQLVRTPRQQQRVQGRMQMALPQNALASLGLLLTASTGLYSPPSHASSLPSFSLNNQAFTSATLSKEVEVRQGMYGEYTVEKTGQQFENAEGTFKTKEETGENKNKYVAILAVLLIGSCVIPMAQY 151 +K F SL L+ SS A P R + +Q ++A+ A ASL AS + P + A + N F S+ L E R+G+Y EY V+ Q F++A T+K+ +ET K KY A++AVL++GS +IPMAQY Sbjct: 1 MKTGFLSLALVA--SSVSALAPNAQPRATKPAFNIQ---KVAVNSMAAASL-----ASALVIGPMADAVDMMDIQPN---FGSSNLVAERVTREGLYREYDVDVGDQVFDDARSTYKSAKETKTKKGKYTALIAVLVVGSFIIPMAQY 135 The following BLAST results are available for this feature:
BLAST of NO22G00510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G00510 ID=NO22G00510|Name=NO22G00510|organism=Nannochloropsis oceanica|type=gene|length=1342bpback to top protein sequence of NO22G00510.1 >NO22G00510.1-protein ID=NO22G00510.1-protein|Name=NO22G00510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=158bpback to top Synonyms
Publications
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