NO22G00350, NO22G00350 (gene) Nannochloropsis oceanica

Overview
NameNO22G00350
Unique NameNO22G00350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1943
Alignment locationchr22:138922..140864 +

Link to JBrowse

Properties
Property NameValue
DescriptionTranslin family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:138922..140864 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR036081Translin_sf
IPR002848Translin_fam
Homology
BLAST of NO22G00350 vs. NCBI_GenBank
Match: CBN76931.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 233.4 bits (594), Expect = 1.300e-57
Identity = 143/340 (42.06%), Postives = 198/340 (58.24%), Query Frame = 0
Query:   82 EDIVLREEYLGGVMGLSQELSRHAIKKASALDVAAVARCRDLLTILNGKLLEFEFRNGGLRRKYDGVKWGLRRMEDLLYELSVVGV----------FPPSSLPPSVPAMETAEGAMEEDKNDPIVPLAALEGIRLRLSSFDEHREVVIKACRDIQKSSKNAIYSTHRSDYSKARSLLTSARAGMKQALRPSLLLHPSLRHTGSVESAMEEFAEAVLFLIWREEGRLAVREEVGEGGEXXXXXXXXVTPIEYVGGLVDLTGEVGRFAVARATAREVTAVEGCLETVMYVAGELVRSTLPGKVNKKMEGLRTNQKKLETLRYELALIQAGKGTVGGMEGAKE 412
            E+ V  +EYLG  M L+ ELSR+AI +AS LD +++  C  L   + G+L++F+ RNG LRRK+DGVK+ +R+++D+LYEL++VG                                  +  P++     E IR+ ++ FDE RE VIK  RDIQK SK AIYS HR+D  KA   ++  R    + L P +   P LR  G+   +MEEFAEA L+ +W +E RLA R EVG            V   EY+GGL+DLTGE+ RFAVARAT R+   V+ CLETV+ +   +  + LPGK+ KK   L  + +KL+ + YELAL++AGKGTV G+ G  E
Sbjct:  195 EEEVADDEYLGAAMRLTSELSRYAITQASILDRSSILACASLCRGVFGELVQFDLRNGPLRRKFDGVKYDVRKVDDILYELALVGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGPVLDTEEFESIRVAMTYFDEKREAVIKRTRDIQKWSKMAIYSLHRADLKKAEKQISDCRTA-AEGLLPLIDETPRLR-MGAYSCSMEEFAEARLYELWLKEKRLATRAEVG-----------LVNTEEYLGGLLDLTGELNRFAVARATERDSVGVKECLETVLVIHEFVTLNALPGKLPKKKNELLNSLRKLQNMTYELALMKAGKGTVSGVSGLDE 521          
BLAST of NO22G00350 vs. NCBI_GenBank
Match: XP_002186379.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65849.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 201.8 bits (512), Expect = 4.100e-48
Identity = 126/319 (39.50%), Postives = 187/319 (58.62%), Query Frame = 0
Query:   88 EEYLGGVMGLSQELSRHAIKKASALDVAAVARCRDLLTILNGKLLEFEFRNGGLRRKYDGVKWGLRRMEDLLYELSVVGVFPPSSLPPSVPAMETAEGAMEEDKNDPIVPLAALEGIRLRLSSFDEHREVVIKACRDIQKSSKNAIYSTHRSDYSKARSLLTSARAGMKQALRPSLLLHPSLRHTGSVESAMEEFAEAVLFLIW---REEGRLAVREEVGEGGEXXXXXXXXVTPIEYVGGLVDLTGEVGRFAVARATAREVTAVEGCLE--TVMYVAGELVRSTLPGKVNKKMEGLRTNQKKLETLRYELALIQAGKG 402
            EEYLG  MGL+Q+L R+ + +A+  DVA+V    DL+  L   LL+ +FRNG LRRKYDG K+ L+ +E LLYEL+V      +    +V     A+ +  E  +  ++PL +L+ ++ R+   D+ RE +IK CRD QK++K +I++ HR D  KA  LLT    G+   L P ++  P LR+ GS  + +EE+ E  LF  W   ++ GR    ++              + P EY+GGL DLTGEVGR+AV R TAR+V  V+ CLE  T +Y A + +   LP  + KKM+ LR + +K+E + YE++L +A  G
Sbjct:  165 EEYLGACMGLAQDLQRYGLGRATVRDVASVQAAADLVGDLLDFLLQLDFRNGPLRRKYDGTKYSLKALETLLYELAV------TDSSRAVEGTSPAKRSKVEKASTMLLPLDSLQALKSRMVYRDDLRESLIKKCRDGQKAAKQSIFALHRGDKEKALELLTECHNGIVNELLPIVVEEPLLRN-GSFANVLEEYVEGKLFCAWLYGKDYGRDVESDQPSGTVLKPEDFDIALEPAEYLGGLCDLTGEVGRYAVQRGTARDVRGVQLCLETNTSIYTALQAI-GRLPQGIPKKMDQLRYSVEKIERMLYEMSLSEAAGG 475          
BLAST of NO22G00350 vs. NCBI_GenBank
Match: GAX13264.1 (hypothetical protein FisN_17Hh202 [Fistulifera solaris])

HSP 1 Score: 194.5 bits (493), Expect = 6.600e-46
Identity = 125/323 (38.70%), Postives = 183/323 (56.66%), Query Frame = 0
Query:   88 EEYL-GGVMGLSQELSRHAIKKASALDVAAVARCRDLLTILNGKLLEFEFRNGGLRRKYDGVKWGLRRMEDLLYELSVVGVFPPSSLPPSVPAMETAEGAMEEDKNDPIVPLAALEGIRLRLSSFDEHREVVIKACRDIQKSSKNAIYSTHRSDYSKARSLLTSARAGMKQALRPSLLLHPSLRHTGSVESAMEEFAEAVLFLIWR------EEGRLAVREEVGEGGEXXXXXXXXVTPIEYVGGLVDLTGEVGRFAVARATAREVTAVEGCLETVMYVAGELVRSTLPGKVNKKMEGLRTNQKKLETLRYELALIQAGKGTV 404
            EEYL G VMGL+QEL R+ + +A+  DVA+V     L+T     LL+ +FRNG LRRKYDGVK+ L+ +E LLYELS+ G     +        ET+E    + +   ++P   L+ ++ R+   DE RE +IK  RD QK++K +I++ HR D  + R LL   R  +++ L P +   P LR  GS    +EE+ EA LF  W        +G  + +   G   +        + P EY+GGL DLTGE+GR+AV R TAR+ +AVE  L+ V  V   L +S     V KK+EG+R  ++KLE + Y+++L +A  G +
Sbjct:  119 EEYLAGAVMGLTQELRRYGLGRATVRDVASVKAAASLVTECQNFLLQMDFRNGPLRRKYDGVKYSLQALETLLYELSITG-----ATVDDTSYAETSEAKRIKTETAALIPTEELQALKDRMDHRDELRESLIKKSRDGQKAAKQSIFALHRGDTKRTRDLLNECRDCIQKDLMPIVREEPFLRTAGSFTGVLEEYVEARLFGAWLYGNAFFSDGTCSSKVS-GVFLQMEDFTEVALEPEEYLGGLCDLTGEIGRYAVQRGTARDKSAVELSLQGVSSVLSAL-QSLERCPVQKKLEGVRRTEEKLERMLYDMSLSEAAGGRI 434          
BLAST of NO22G00350 vs. NCBI_GenBank
Match: GAX11891.1 (hypothetical protein FisN_17Lh202 [Fistulifera solaris])

HSP 1 Score: 191.8 bits (486), Expect = 4.300e-45
Identity = 126/323 (39.01%), Postives = 185/323 (57.28%), Query Frame = 0
Query:   88 EEYL-GGVMGLSQELSRHAIKKASALDVAAVARCRDLLTILNGKLLEFEFRNGGLRRKYDGVKWGLRRMEDLLYELSVVGVFPPSSLPPSVPAMETAEGAMEEDKNDPIVPLAALEGIRLRLSSFDEHREVVIKACRDIQKSSKNAIYSTHRSDYSKARSLLTSARAGMKQALRPSLLLHPSLRHTGSVESAMEEFAEAVLFLIWR------EEGRLAVREEVGEGGEXXXXXXXXVTPIEYVGGLVDLTGEVGRFAVARATAREVTAVEGCLETVMYVAGELVRSTLPGKVNKKMEGLRTNQKKLETLRYELALIQAGKGTV 404
            EEYL G VMG +QEL R+ + +A+  DVA+V     L+T     LL+ +FRNG LRRKYDGVK+ L+ +E LLYELS+ G    ++L  +  A ET+E    + +   ++P   L+GI+ R+   DE RE +IK  RD QK++K +I++ HR D  + R L+   R  +++ L P +   P LR  GS    +EE+ EA LF  W        +G    +   G   +        + P EY+GGL DLTGE+GR+AV R TAR+ +AVE  L+ V  V   L +S     V KK+E +R  ++KLE + Y+++L +A  G +
Sbjct:  119 EEYLAGAVMGSTQELRRYGLGRATVRDVASVRAAASLVTECQNFLLQMDFRNGPLRRKYDGVKYSLQALETLLYELSITG----ATLGDTSYA-ETSEAKRIKTETTTLIPTEELQGIKERMDHRDELRESLIKKSRDGQKAAKQSIFALHRGDTKRTRDLMNECRDCIQKELMPIVREEPFLRTAGSFTGVLEEYVEARLFGAWLYGNTFFSDGTCNSKVS-GVFLQMEDFTEVALEPEEYLGGLCDLTGEIGRYAVQRGTARDKSAVELSLQGVSSVLSAL-QSLERCPVQKKLEAVRRTEEKLERMLYDMSLSEAAGGRI 434          
BLAST of NO22G00350 vs. NCBI_GenBank
Match: EJK66016.1 (hypothetical protein THAOC_13080, partial [Thalassiosira oceanica])

HSP 1 Score: 190.3 bits (482), Expect = 1.200e-44
Identity = 129/349 (36.96%), Postives = 191/349 (54.73%), Query Frame = 0
Query:   81 GEDIVLREEYLGG-VMGLSQELSRHAIKKAS-----ALDVAAVARCRDLLTILNGKLLEFEFRNGGLRRKYDGVKWGLRRMEDLLYELSVVGVFPPSSL--PPSVPAMETAEGAMEEDKNDP-IVPLAALEGIRLRLSSFDEHREVVIKACRDIQKSSKNAIYSTHRSDYSKARSLLTSARAGMKQALRPSLLLHPSLRHTGSVESAMEEFAEAVLFLIWREEGRLAVREEVGEGGEXXXXXXXXVTPIEYVGGLVDLTGEVGRFAVARATAREVTAVEGCLETVMYVAGEL-VRSTLPGKVN-KKMEGLRTNQKKLETLRYELALIQAGKGTVGGMEGAKERGEGMKE 419
            G  I+  EEY+GG  +GL  +LS+HA+ +AS     ++ V  +  CRD   ++   LL F+FRNG LRRKYD +K+ L+ +E +LYELSV G    + L  P    A     G  E   + P ++P   ++ IR R+   D+ RE +IK CRD QK +K AI++ HR+D   A +LL+     ++Q L P L   P LR +GS    +EE+ EA LF  W EE      E+ G            ++  E++GGL+DLTGE+GR AV R T R+   VE CL++   V   L +   +PG+ + KK+  ++ N +KLE + YE +L++        M G KE    ++E
Sbjct:  172 GRSILTDEEYIGGCCIGLCHDLSKHAVNRASNAANDSMAVPFIESCRDTAVVILDALLAFDFRNGPLRRKYDSLKYALKNLETVLYELSVAGAVGGNKLDGPAKKKAKTEGRGTGEASADSPSLLPKDDIDAIRERMEHRDKLRETLIKTCRDGQKQAKQAIFALHRNDMKTASTLLSKCEECVEQNLVPILREEPCLR-SGSFTGVLEEYVEAKLFAAWLEES----EEKKGRRILLPQEIPLPISTDEFIGGLMDLTGEIGRHAVQRGTVRDKAGVELCLQSSKTVYNGLKLLGKIPGRSSAKKVAMVQKNVEKLERVLYEQSLME--------MAGRKEFASSVEE 507          
BLAST of NO22G00350 vs. NCBI_GenBank
Match: XP_002295219.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87523.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 181.0 bits (458), Expect = 7.600e-42
Identity = 127/360 (35.28%), Postives = 189/360 (52.50%), Query Frame = 0
Query:   84 IVLREEYLGGVMGLSQELSRHAIKKASAL-----DVAAVARCRDLLTILNGKLLEFEFRNGGLRRKYDGVKWGLRRMEDLLYELSVVGVFPPSSLPPSVPAMETAEGA------MEEDKNDPI----------VPLAALEGIRLRLSSFDEHREVVIKACRDIQKSSKNAIYSTHRSDYSKARSLLTSARAGMKQALRPSLLLHPSLRHTGSVESAMEEFAEAVLFLIWREEGRLAVREEVGEGGEXXXXXXXXVTPI---------EYVGGLVDLTGEVGRFAVARATAREVTAVEGCLETVMYVAGEL-VRSTLPGKVNKKMEGLRTNQKKLETLRYELALIQ-AGKGTVGGMEGAKE 412
            +V  EEYLGG + L  +L+++ + +A+        V AV + RD+++ +   LLEF+FRNG LRRKYDG K+ L+ +E +LYELSV G    +       + ET EG       +E+ K   +          +P   +  I+LR+   D  RE +IKACRD QKS+K +I++ HR D ++A +LL          L   L   PSLR +GS+   +EE+ E ++F  W         E+   GG         + P          EY+GGL DLTGEVGR+AVAR T R+  +V+ CL+T   +   L +   LPG + KK   L  + + LE + YEL+L++  G+  V  +E + E
Sbjct:  179 VVTDEEYLGGCILLCHDLAKYGVSRATNAVTDPDAVPAVQKARDIVSKVLEMLLEFDFRNGPLRRKYDGTKYKLKTLETVLYELSVAGAGGGN----KASSRETTEGGPLKKMKLEDKKGGDVDMTDYDASGTIPNDEIAAIKLRMDHRDVLRERLIKACRDGQKSAKQSIFALHRGDTTRASNLLREVETLYNNDLLTILKEEPSLR-SGSLSGVLEEYVEGIMFYTWLH------GEDNANGGSSKKPSCKILKPSELPLSVSSEEYLGGLCDLTGEVGRYAVARGTVRDKESVKLCLDTNKSIQNALKIMGKLPGSIGKKQTALIRSVENLERMIYELSLMEMTGREVVTAVEDSPE 527          
BLAST of NO22G00350 vs. NCBI_GenBank
Match: OEU21712.1 (Translin, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 170.6 bits (431), Expect = 1.000e-38
Identity = 116/341 (34.02%), Postives = 170/341 (49.85%), Query Frame = 0
Query:   92 GGVMGLSQELSRHAIKKASALDVAAVARCRDLLTILNGKLLEFEFRNGGLRRKYDGVKWGLRRMEDLLYELSVVG------------VFPPSSLPPSVPAMETAEGAMEEDKNDPIVPLAALEGIRLRLSSFDEHREVVIKACRDIQKSSKNAIYSTHRSDYSKARSLLTSARAGMKQALRPSLLLHPSLRHTGSVESAMEEFAEAVLFLIW-----------REEGRLAVREEVGE-----GGEXXXXXXXXVTPI-----EYVGGLVDLTGEVGRFAVARATAREVTAVEGCLETVMYVAGEL-VRSTLPGKVNKKMEGLRTNQKKLETLRYELALIQA 399
            G  MGL Q+LSR+A+ +A A D+ +V + RDL+  +   LL+F+FRNG LRRKYDG K+ L+ +E LLYELSV G                                              L  +R R+   D  RE +IK CRD QK +K AIY+ HR+DY K+ SL+      +   L P +   P LR+ GS  + +EE+AEA LF +W            ++ ++ +  E        G +          PI     +Y+GG+ DLTGE+GR+AV   TAR+   V  CLE+   +   + +    P  +NKKM+ LR + +K+E + YE++L +A
Sbjct:    1 GACMGLCQDLSRYAMGRACARDINSVQQARDLVNQILDYLLQFDFRNGNLRRKYDGTKYALKSLETLLYELSVTGSSLEKVAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTALRQRMEHRDSLREKLIKKCRDGQKMAKQAIYALHRNDYKKSESLIKDCENCIINELLPIVEEEPPLRY-GSFAAVIEEYAEAKLFYVWLLGKPTTALTADDKNKMDIESESSPKTTTGGAKGILLLPHEFEPIQLQPEDYLGGVCDLTGEIGRYAVQCGTARDYDGVSLCLESNSIILKSIQLLERSPSSINKKMDQLRKSVQKIERMTYEMSLSKA 340          
BLAST of NO22G00350 vs. NCBI_GenBank
Match: GBG30093.1 (Translin [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 161.4 bits (407), Expect = 6.200e-36
Identity = 105/322 (32.61%), Postives = 168/322 (52.17%), Query Frame = 0
Query:   89 EYLGGVMGLSQELSRHAIKKASALDVAAVARCRDLLTILNGKLLEFEFRNGGLRRKYDGVKWGLRRMEDLLYELSVVGVFPPSSLPPSVPAMETAEGAMEEDKNDPIVPLAALEGIRLRLSSFDEH---REVVIKACRDIQKSSKNAIYSTHRSDYSKARSLLTSARAGMKQALRPSLLLHPSLRHTGSVESAMEEFAEAVLFLIWR-EEGRL----AVREEVGEGGEXXXXXXXXVTPIEYVGGLVDLTGEVGRFAVARATAREVTAVEGCLETVMYVAGELV--RSTLPGKVNKKMEGLRTNQKKLETLRYELALIQAGK 401
            EYL G +  + EL  +AI +  + D+ +V+ C  ++  +N   ++F  RNG LRR+YD +K+ +R+MED+LYELS++               +    ++ E +      L  +E     +   DEH   RE VI   R  QK SK AIY+ HR ++ +AR LLT+        +  + +    L H GS  +A+EE+AEA +F  WR  +G L    A+RE+V             +   +Y+GG+VD TGE+GR+ V RATAR+   V+  L T++ +    +  +     K+ KK+E +  N++K+    YEL L++  K
Sbjct:  181 EYLMGTLRFADELETYAIGRGMSRDIVSVSVCSQMVKAMNAAFIQFNLRNGPLRRRYDSLKYRVRKMEDILYELSLI-------------CSDAEVASIREHEQLTSETLLDMEEFGTMVKEIDEHTEEREKVITTSRGPQKDSKKAIYALHRENWGEARKLLTACEETFNTFVATTKIPRDEL-HAGSFGNALEEYAEARIFEEWRVHKGSLLTLDAMREQV------------DIQERDYLGGIVDFTGEIGRYGVVRATARDEDTVKQVLATMLIIKDYAIDFQEIADPKMVKKLEAVFNNERKMRNTLYELTLLKHSK 476          
BLAST of NO22G00350 vs. NCBI_GenBank
Match: KOO25752.1 (translin-like protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 160.2 bits (404), Expect = 1.400e-35
Identity = 116/347 (33.43%), Postives = 166/347 (47.84%), Query Frame = 0
Query:   88 EEYLGGVMGLSQELSRHAIKKASALDVAAVARCRDLLTILNGKLLEFEFRNGGLRRKYDGVKWGLRRMEDLLYELSVVGVFPPSSLPPSVPA-----------METAEGAMEEDKNDPIVPLAALEGIRLRLSSFDEHREVVIKACRDIQKSSKNAIYSTHRSDYSKARSLLTSARAGMKQALRPSLLLHPSLRHTGSVESAMEEFAEAVLFLIW------------------------REEGRLAVREEVGEGGEXXXXXXXXVTPIEYVGGLVDLTGEVGRFAVARATAREVTAVEGCLETVMYVAGEL--VRSTLPGKVNKKMEGLRTNQKKLETLRYELALIQ 398
            EE+L G++G + E+ R+A   A+A D  +V   R ++  L+  L  F+ RNG LRR YD +K+ +RR+EDL+ ELS   +FPP+ +P   PA                                              RE +IK CR+ QK +K AI++  R D   AR  L +ARA  +Q +R  +  +PSLR  G +   +EE AEAVLF  W                         E  R+ +  E    G+        + P EY+GG+ DL GE+GRFAV RAT R+  AV  CL T + V   +  +    P  + KK+E L+T  +KLE L YEL+L++
Sbjct:   90 EEWLQGLIGAAHEIGRYANVVATAGDTRSVEAARAVVNALHEALQAFDLRNGPLRRSYDSLKYVVRRLEDLICELS---LFPPAGMPGHAPAPALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAREALIKKCREPQKLAKQAIFAMQRGDREGARKQLDTARALARQLIRQDVAAYPSLRSQGCLRGMLEELAEAVLFEGWLGGRSAQXXXXXXXXXXXXXXXXXSEPHRILLCGEEALLGD-------DLLPSEYLGGVCDLVGEIGRFAVRRATERDAPAVRACLGTAVAVQSAILVLGQAAPRGIAKKVEALKTAVRKLEQLLYELSLVE 426          
BLAST of NO22G00350 vs. NCBI_GenBank
Match: XP_005765898.1 (hypothetical protein EMIHUDRAFT_103776 [Emiliania huxleyi CCMP1516] >EOD13469.1 hypothetical protein EMIHUDRAFT_103776 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 159.8 bits (403), Expect = 1.800e-35
Identity = 113/332 (34.04%), Postives = 170/332 (51.20%), Query Frame = 0
Query:   68 DAFVKVDTVLEIVGEDIVLREEYLGGVMGLSQELSRHAIKKASALDVAAVARCRDLLTILNGKLLEFEFRNGGLRRKYDGVKWGLRRMEDLLYELSVVGVFPPSSLPPSVPAMETAEGAMEEDKNDPIVPLAALEGIRLRLSSFDEHREVVIKACRDIQKSSKNAIYSTHRSDYSKARSLLTSARAGMKQALRPSLLLHPSLRHTGSVESAMEEFAEAVLFLIWREEGRLAVREEVGEGGEXXXXXXXXVTPIEYVGGLVDLTGEVGRFAVARATAREVTAVEGCLETVMYVAGELVR--STLPGKVNKKMEGLRTNQKKLETLRYELALIQ 398
            DAF++  T L          EE+LGG++  + E+ R+A   A+A DV +V     ++  L+  L+ F+FRNG LRR +D VK+  RR+ED LYEL    +FP                         +V  A L+  R   ++ D  RE VIK CR+ QK +K AIY+  R D +     + +AR  + + L   +  HP+LR   +++  +EE AEA    +++    +     +  G E        ++P EY+GG+ DL GE+GRFAV RA  R+  AV+  L T + V   L+      P  + KK E LRT  +K+ETL YEL+L++
Sbjct:  109 DAFLRTGT-LGARPSSTYTDEEWLGGLIAATHEVGRYAGLAATAGDVRSVEGAAAVVGALHEGLMNFDFRNGSLRRGFDSVKYVERRLEDTLYELK---LFPXXXXXXXXXXXXXXXXXXTAVAPLALVDGAGLDAARAAYATLDAAREEVIKKCREPQKQAKQAIYALQRGDGAAGGRQIEAARK-LARLLLAEVKPHPTLRQQAALKGMLEELAEACPAALFQHWLAIPGGAVLLRGDEAPALLGDELSPSEYLGGVCDLVGEIGRFAVRRAADRDAAAVQDALSTAVAVQAALLSLGHAAPRALQKKAEPLRTAVRKMETLLYELSLVE 435          
The following BLAST results are available for this feature:
BLAST of NO22G00350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN76931.11.300e-5742.06conserved unknown protein [Ectocarpus siliculosus][more]
XP_002186379.14.100e-4839.50predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX13264.16.600e-4638.70hypothetical protein FisN_17Hh202 [Fistulifera sol... [more]
GAX11891.14.300e-4539.01hypothetical protein FisN_17Lh202 [Fistulifera sol... [more]
EJK66016.11.200e-4436.96hypothetical protein THAOC_13080, partial [Thalass... [more]
XP_002295219.17.600e-4235.28predicted protein [Thalassiosira pseudonana CCMP13... [more]
OEU21712.11.000e-3834.02Translin, partial [Fragilariopsis cylindrus CCMP11... [more]
GBG30093.16.200e-3632.61Translin [Aurantiochytrium sp. FCC1311][more]
KOO25752.11.400e-3533.43translin-like protein [Chrysochromulina sp. CCMP29... [more]
XP_005765898.11.800e-3534.04hypothetical protein EMIHUDRAFT_103776 [Emiliania ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR025ncniR025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR077ngnoR077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO22G00350.1NO22G00350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|557418gene_7034Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO22G00350.1NO22G00350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO22G00350 ID=NO22G00350|Name=NO22G00350|organism=Nannochloropsis oceanica|type=gene|length=1943bp
ATGCCTTTCACTTCGGACCTCGTGCTGTCCATCCAGAAAGCGAACAATGG
CGACTTCGCCAGCATGCGCGAGAGCTTCGAAGAGAATGAAATTAAGCTCC
AGGCTCTTAATCCTCTAATGCGTAGTTTGCGGAATCAATTGTCGTATGCT
CTTCATGAGTTGCACGATGGGGCCGTGGAGGTTTCTGGTCCGCTCCTAGA
TGACGCCTTTGTCAAGgtaagacagcgaaaaagcaaataaaatagagaga
acaacatagctataagtggaggaggcatgctgggaatatcctaagcaaaa
acagtcaagtcctataagcatctcctcatcgcgttcttccctccctccct
cacccatcagGTGGACACAGTCCTCGAAATTGTCGGAGAGGACATCGTAC
TACGCGAAGgttggatcagcgatattctggatctgatggttaagactcgg
gcgtttcaatacttcctctcgacaggccggcttctccctcccaccgatct
taccttgacaggagggaggggggaggaacggaaggaggacgcgtacggga
tgaagAGTACCTGGGAGGTGTGATGGGTTTAAGCCAGGAGCTATCTCGGC
ATGCGATTAAGAAAGCGTCGGCCTTGGATGTGGCGGCGGTGGCAAGgttc
ggatggagagagggaaggagggggtgggtgggtggaaaggtaggagggcg
atcgccttgtaagcagccccatatttcttgcatatacataaataacaaat
acaatatgtaatatgattacaataattacacgcagGTGCCGCGACCTTCT
CACCATCCTGAATGGGAAACTTCTCGAATTTGAATTTCGgtacgtctttc
catctgcccttcttctctccctcttacttccttgccgccaccattgatcc
catccgcacaacccacttctctccctcactccctccctccctctgctcca
gCAATGGCGGCCTGCGTCGCAAATATGATGGGGTCAAGTGGGGCCTTCGG
CGTATGGAAGATCTCCTCTACGAGCTGTCGGTCGTCGGCGTCTTCCCCCC
TTCCTCCCTCCCGCCTTCGGTGCCAGCGATGGAAACGGCTGAGGGTGCGA
TGGAAGAGGACAAGAATGACCCCATCGTCCCGTTGGCGGCGCTCGAAGgt
gtggatgtgggaacctcgtggaagaagcacagacagagagttacctcctc
ctctactcctcctttctttcttcctctctcacactaccctcctacccctc
cctccctccctccctccctccctctgcccagGCATTCGTCTCCGTCTCTC
CTCCTTCGACGAACACCGAGAAGTGGTCATCAAGGCCTGTCGTGACATCC
AAAAGTCCAGCAAGAACGCCATCTACTCCACCCACCGCTCCGACTATTCC
AAGGCTCGTTCCCTCCTCACTTCCGCCCGGGCCGGCATGAAGCAAGCCCT
CCGTCCCTCCCTCCTCCTCCACCCATCCCTTCGGCACACGGGCTCGGTGG
AGAGTGCCATGGAAGAGTTTGCCGAGGCCGTTTTGTTTTTGATCTGGAGA
GAGGAAGGGCGCCTGGCCGTGCGGGAGGAAGTAGGGGAGGGAGGTGAGGA
GGTGAAGGAGGGAGGGATGGAAGTGACCCCCATCGAGTACGTTGGGGGTT
TGGTAGACCTGACGGGGGAGGTGGGAAGGTTTGCGGTGGCACGGGCGACG
GCGCGGGAGGTGACGGCGGTGGAAGGATGCTTGGAGACAGTCATGTATGT
GGCGGGAGAACTGGTGCGATCGACCCTGCCGGGCAAGGTGAACAAGAAGA
TGGAGGGGCTGCGGACGAATCAGAAGAAGCTGGAGACGCTGCGGTATGAG
CTAGCATTGATCCAGGCGGGGAAGGGGACGGTAGGGGGAATGGAAGGGGC
GAAAGAGAGGGGGGAGGGGATGAAGGAAACGGAAGAGGAGTAA
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protein sequence of NO22G00350.1

>NO22G00350.1-protein ID=NO22G00350.1-protein|Name=NO22G00350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=423bp
MPFTSDLVLSIQKANNGDFASMRESFEENEIKLQALNPLMRSLRNQLSYA
LHELHDGAVEVSGPLLDDAFVKVDTVLEIVGEDIVLREEYLGGVMGLSQE
LSRHAIKKASALDVAAVARCRDLLTILNGKLLEFEFRNGGLRRKYDGVKW
GLRRMEDLLYELSVVGVFPPSSLPPSVPAMETAEGAMEEDKNDPIVPLAA
LEGIRLRLSSFDEHREVVIKACRDIQKSSKNAIYSTHRSDYSKARSLLTS
ARAGMKQALRPSLLLHPSLRHTGSVESAMEEFAEAVLFLIWREEGRLAVR
EEVGEGGEEVKEGGMEVTPIEYVGGLVDLTGEVGRFAVARATAREVTAVE
GCLETVMYVAGELVRSTLPGKVNKKMEGLRTNQKKLETLRYELALIQAGK
GTVGGMEGAKERGEGMKETEEE*
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Synonyms
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