NO22G00020, NO22G00020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO22G00020 vs. NCBI_GenBank
Match: XP_005852806.1 (hypothetical protein NGA_0391902 [Nannochloropsis gaditana CCMP526] >XP_005855006.1 hypothetical protein NGA_0391901 [Nannochloropsis gaditana CCMP526] >EKU21360.1 hypothetical protein NGA_0391901 [Nannochloropsis gaditana CCMP526] >EKU23027.1 hypothetical protein NGA_0391902 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 163.7 bits (413), Expect = 4.500e-37 Identity = 77/101 (76.24%), Postives = 89/101 (88.12%), Query Frame = 0 Query: 51 MSSTVAVTPTTLWMLQYHYVPDILEKRTPHRAGHLAGLNQAAADGTMVLGGALADPVDMGILVFTDKAVAEAFPAEDPYVKAGLVREWKVRPWTVVAGSKL 152 MSS A+TPTTLW+LQYHYV DIL++R PHRA HLAGL QAA +G++VLGGALADPVDMG+LVFTDK+VAE F A D YVKAGLV+EW+VR WTVVAGSK+ Sbjct: 9 MSSAQAITPTTLWLLQYHYVNDILDRRGPHRAEHLAGLTQAAKEGSLVLGGALADPVDMGVLVFTDKSVAENFAAADAYVKAGLVKEWQVRQWTVVAGSKI 109
BLAST of NO22G00020 vs. NCBI_GenBank
Match: EWM20419.1 (Dimeric alpha-beta barrel [Nannochloropsis gaditana]) HSP 1 Score: 161.4 bits (407), Expect = 2.200e-36 Identity = 89/151 (58.94%), Postives = 107/151 (70.86%), Query Frame = 0 Query: 1 MLRFAPVAVLAARTAFSCCAHSVAVARDFAASSPFKFSSLLFLRVVPRRAMSSTVAVTPTTLWMLQYHYVPDILEKRTPHRAGHLAGLNQAAADGTMVLGGALADPVDMGILVFTDKAVAEAFPAEDPYVKAGLVREWKVRPWTVVAGSKL 152 ML P +LA+R + C S+ A+ F LL +R MSS A+TPTTLW+LQYHYV DIL++R PHRA HLAGL QAA +G++VLGGALADPVDMG+LVFTDK+VAE F A D YVKAGLV+ W+VR WTVVAGSK+ Sbjct: 31 MLHSVP-GMLASRAS---CRFSIRHTFQLNATQRFPTQPLL----QHKRVMSSAQAITPTTLWLLQYHYVNDILDRREPHRAEHLAGLTQAAKEGSLVLGGALADPVDMGVLVFTDKSVAENFAAADAYVKAGLVKVWQVRQWTVVAGSKI 173
BLAST of NO22G00020 vs. NCBI_GenBank
Match: KOO27323.1 (hypothetical protein Ctob_010138 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 103.2 bits (256), Expect = 7.200e-19 Identity = 56/116 (48.28%), Postives = 69/116 (59.48%), Query Frame = 0 Query: 37 FSSLLFLRVVP---RRAMSSTVAVTPTTLWMLQYHYVPDILEKRTPHRAGHLAGLNQAAADGTMVLGGALADPVDMGILVFTDKAVAEAFPAEDPYVKAGLVREWKVRPWTVVAGS 150 F LL L P RA+SS+ T L +L Y YV D +EKR P+RA HL + G ++LGGALA+PVD G+L+FT A AE F DPYV G+V W VR W+VV GS Sbjct: 3 FRGLLRLSATPAARARALSSSAPPTVRPLHLLLYQYVDDAVEKRQPYRANHLGHARASIDRGELLLGGALANPVDGGVLIFTAGAAAERFAETDPYVLNGIVTSWTVREWSVVVGS 118
BLAST of NO22G00020 vs. NCBI_GenBank
Match: WP_096341576.1 (hypothetical protein [Sphingomonas spermidinifaciens] >PCD03177.1 hypothetical protein COC42_01785 [Sphingomonas spermidinifaciens]) HSP 1 Score: 103.2 bits (256), Expect = 7.200e-19 Identity = 47/89 (52.81%), Postives = 60/89 (67.42%), Query Frame = 0 Query: 61 TLWMLQYHYVPDILEKRTPHRAGHLAGLNQAAADGTMVLGGALADPVDMGILVFTDKAVAEAFPAEDPYVKAGLVREWKVRPWTVVAGS 150 T W+L+Y + PD LE+R RA HL +AA GT++LGGA DP D G+LVFT + AEAF DPYV AGLV +W ++PWT V G+ Sbjct: 2 THWLLRYRFAPDYLERRATFRAEHLGIAWEAADAGTLILGGAAGDPPDEGLLVFTTREAAEAFAGADPYVAAGLVLDWTLKPWTTVVGA 90
BLAST of NO22G00020 vs. NCBI_GenBank
Match: XP_022839434.1 (YCII-related [Ostreococcus tauri] >CEF98724.1 YCII-related [Ostreococcus tauri]) HSP 1 Score: 99.4 bits (246), Expect = 1.000e-17 Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 0 Query: 44 RVVPRRAMSSTVAVTPT-TLWMLQYHYVPDILEKRTPHRAGHLAGLNQAAADGTMVLGGALADPVDMGILVF--TDKAVAEAFPAEDPYVKAGLVREWKVRPWTVVAGS 150 RVV R+ + ++ P+ + W+L +YV ++ E+R P+R HLAG + + A G V+ GAL DPVD G+ VF D++V AF D YVK GLV W VRPWTVV G+ Sbjct: 45 RVVKSRSSAVAMSAAPSNSYWLLTLNYVENMAERRGPYREEHLAGASASHAKGECVMAGALTDPVDTGVFVFKNCDESVVRAFAENDAYVKNGLVTSWNVRPWTVVVGN 153
BLAST of NO22G00020 vs. NCBI_GenBank
Match: CAP43687.1 (conserved hypothetical protein [Bordetella petrii]) HSP 1 Score: 97.1 bits (240), Expect = 5.200e-17 Identity = 53/108 (49.07%), Postives = 68/108 (62.96%), Query Frame = 0 Query: 45 VVPRRAMSSTVAVTPTTLWMLQYHYVPDILEKRTPHRAGHLAGLNQAAADGTMVLGGALADPVDMGILVFTDK--AVAEAFPAEDPYVKAGLVREWKVRPWTVVAGSK 151 + P R S+ A+ ++L Y VPD LE+R R HLA QA A G +VLGGALADP D +L+F + AVAEAF DPYV+AGLV++W+VR WT V G + Sbjct: 9 IEPSRQFSAGAAMH----YLLFYDLVPDYLERRGEFRDTHLALARQAVARGELVLGGALADPADQAVLLFKGESPAVAEAFAQADPYVQAGLVKQWRVRRWTTVVGEQ 112
BLAST of NO22G00020 vs. NCBI_GenBank
Match: WP_041863027.1 (hypothetical protein [Bordetella petrii]) HSP 1 Score: 97.1 bits (240), Expect = 5.200e-17 Identity = 49/90 (54.44%), Postives = 61/90 (67.78%), Query Frame = 0 Query: 63 WMLQYHYVPDILEKRTPHRAGHLAGLNQAAADGTMVLGGALADPVDMGILVFTDK--AVAEAFPAEDPYVKAGLVREWKVRPWTVVAGSK 151 ++L Y VPD LE+R R HLA QA A G +VLGGALADP D +L+F + AVAEAF DPYV+AGLV++W+VR WT V G + Sbjct: 3 YLLFYDLVPDYLERRGEFRDTHLALARQAVARGELVLGGALADPADQAVLLFKGESPAVAEAFAQADPYVQAGLVKQWRVRRWTTVVGEQ 92
BLAST of NO22G00020 vs. NCBI_GenBank
Match: WP_046347348.1 (hypothetical protein [Sphingomonas changbaiensis] >GAO38496.1 hypothetical protein SCH01S_16_00120 [Sphingomonas changbaiensis NBRC 104936]) HSP 1 Score: 97.1 bits (240), Expect = 5.200e-17 Identity = 44/88 (50.00%), Postives = 59/88 (67.05%), Query Frame = 0 Query: 63 WMLQYHYVPDILEKRTPHRAGHLAGLNQAAADGTMVLGGALADPVDMGILVFTDKAVAEAFPAEDPYVKAGLVREWKVRPWTVVAGSK 151 ++L Y PD LE+R+ R HL +AA G ++LGGA+ DP + +L+FTD+A AEAF DPYV GLV+EW+VRPWT V G + Sbjct: 4 FILTYELAPDYLERRSQFRTEHLKLAWEAADQGALLLGGAVGDPPESAMLLFTDRAAAEAFAKADPYVAQGLVKEWRVRPWTTVVGKE 91
BLAST of NO22G00020 vs. NCBI_GenBank
Match: XP_001744810.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ90043.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 96.7 bits (239), Expect = 6.700e-17 Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 0 Query: 54 TVAVTPTTLWMLQYHYVPDILEKRTPHRAGHLAGLNQAAADGTMVLGGALADPVDMGILVFTDKAVAEAFPAEDPYVKAGLVREWKVRPWTVVAGS 150 T A TP L +L+Y +V ++ EKR PHR+ HL AA G+++LGGA A+PVD G L+F A F +DPYV+ LVR++++R W+VV GS Sbjct: 30 TAAATPVPLAVLKYFFVENMAEKRVPHRSAHLQLARDAARRGSLLLGGAAANPVDAGFLIFRSPQEAREFAEQDPYVRGELVRKYEIREWSVVVGS 125
BLAST of NO22G00020 vs. NCBI_GenBank
Match: ADB53320.1 (YCII-related protein [Conexibacter woesei DSM 14684]) HSP 1 Score: 95.9 bits (237), Expect = 1.100e-16 Identity = 48/88 (54.55%), Postives = 57/88 (64.77%), Query Frame = 0 Query: 59 PTTLWMLQYHYVPDILEKRTPHRAGHLAGLNQAAADGTMVLGGALADPVDMGILVFTDKAVAEAFPAEDPYVKAGLVREWKVRPWTVV 147 P TL +L Y YV DILE+R PHR HLA ++ G +V+ GA+ DPV G+ V D A A AF AEDPYV AGLV +V PWTVV Sbjct: 2 PETLHLLSYDYVADILERRAPHREAHLAAISAFHRAGRIVMAGAVGDPVAGGLFVLRDAADAAAFMAEDPYVAAGLVTAHRVEPWTVV 89 The following BLAST results are available for this feature:
BLAST of NO22G00020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO22G00020 ID=NO22G00020|Name=NO22G00020|organism=Nannochloropsis oceanica|type=gene|length=919bpback to top protein sequence of NO22G00020.1 >NO22G00020.1-protein ID=NO22G00020.1-protein|Name=NO22G00020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=152bpback to top Synonyms
Publications
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