NO21G02530, NO21G02530 (gene) Nannochloropsis oceanica

Overview
NameNO21G02530
Unique NameNO21G02530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1470
Alignment locationchr21:770744..772213 -

Link to JBrowse

Properties
Property NameValue
DescriptionPhosphatidylethanolamine-binding protein PEBP
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:770744..772213 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036610PEBP-like_sf
IPR008914PtdEtn-bd_prot_PEBP
Homology
BLAST of NO21G02530 vs. NCBI_GenBank
Match: EWM29466.1 (Phosphatidylethanolamine-binding protein PEBP [Nannochloropsis gaditana])

HSP 1 Score: 432.6 bits (1111), Expect = 1.300e-117
Identity = 219/383 (57.18%), Postives = 264/383 (68.93%), Query Frame = 0
Query:    1 MSKTKQQAHTTSQELQSVGLIPSVLPEGFRSTYSINATFGMLNIDCGAEVPLHALDDHSPVYSVLEARDEAYYTFILVDPDSPTPEAPHDRELLLHLVTNVPGKQADSRIGEIVVPYRMPSQNQGQSRGVHRYLLAILEQPQGGQQIVHIARPKYRTNFSIAEYAKLYRFKLVGATFFYSSWDEAHAQGTNATTAMVRLHDSLEYAKSMLEKANLLKELVLEGSVHFIVPLLLRFNGETVCAGDEVPSAVADTTPVITF-----DSEKDQSFYTVVIVDADFPSIHQATDRALLLMLTANIPSSEGDSSVGDVIMHYMSPSSFPGGTGLHRYFVLLLEQHGGILEEGAVDIPDRRRGFQLHEFMKAHASLEAVGATFFLGRRK 379
            M+K K +A T SQEL + GLIP VLP+ FRS YS+NATFG  N D GA+VP   +D   PVY ++EAR  +YYTFILVDPDS   +       LLHLVTNV G+Q DSR G  VVPY++  Q+QG   G HRYLL  LEQPQ GQQ +HIA PKYRT FS+  +  + + K VGAT  + SWD+     +N+T A  R  DSL YA+SM+ K+ LL ELVLEGSVHF VP+ L  N E V AGDEVP+ V D  PV+ F     +  K  + YTV+  DADFPSIHQ TDR++LLML  NIP + GDS +GD ++ Y+SP    G TG+HRYFVLLLEQHGG LEEGA+D P+ RR F  H+F+K H SLEAV ATFFLGRRK
Sbjct:    8 MTKLKHKALTVSQELSAAGLIPDVLPDDFRSAYSVNATFGCNNFDSGAKVPPGEMDHPHPVYKLIEARHGSYYTFILVDPDSSPMQGSRSEVQLLHLVTNVSGQQPDSRNGNEVVPYKISRQDQGHIHGTHRYLLIALEQPQEGQQQLHIAPPKYRTQFSVLNFIHMNKVKPVGATLLHVSWDDYRPSKSNSTNAQAREQDSLAYAESMVRKSKLLNELVLEGSVHFKVPVTLTINEEIVNAGDEVPAQVMDLAPVVQFHPGLEEVRKANALYTVICADADFPSIHQPTDRSMLLMLATNIPGTSGDSRIGDPVVPYVSPLRLAGSTGIHRYFVLLLEQHGGALEEGAIDPPENRRAFSFHDFLKTHTSLEAVNATFFLGRRK 390          
BLAST of NO21G02530 vs. NCBI_GenBank
Match: XP_018909050.1 (PREDICTED: uncharacterized protein LOC109038462 [Bemisia tabaci] >XP_018909051.1 PREDICTED: uncharacterized protein LOC109038462 [Bemisia tabaci])

HSP 1 Score: 100.9 bits (250), Expect = 8.900e-18
Identity = 90/339 (26.55%), Postives = 146/339 (43.07%), Query Frame = 0
Query:   10 TTSQELQSVGLIPSVLPEGFRSTYSIN------ATFGMLNIDCGAEVPLHALDDHSPVYSVLEARDEAYYTFILVDPDSPTPEAPHDRELLLHLVTNVPGKQADSRIGEIVVPYRMPSQNQGQSRGVHRYLLAILEQP----QGGQQIVHIARPKYRTNFSIAEYAKLYRFKLVGATFFYSSWDEAHAQGTNATTAMVRLHDSLEYAKSMLEKANLLKELVLEGSVHFIV--PLLLRF-NGETVCAGDEVPSAVADTTPVITFDSEKDQSFYTVVIVDADFPSIHQATDRALLLMLTANIPSSEGDSSVGDVIMHYMSPSSFPG-GTGLHRYFVLLLEQ 335
            T  Q++   G+IP V+    R+  ++       A FG           L   D     +    A  E YYT IL DPDSP+   P +RE LL LV N+PG   D + G+ +V Y  P  + G+  G HR++    +QP       +  V     + R NFS  ++   YR     A+ F+      HA+  +     +  H  ++  +    K   ++  ++   +H +    L + F  G+    G+ +  +    TP + + ++ D  +Y V+++D D P       R  L  +  NIPS   D   GD++  Y+ P+  PG  TG HRY   +  Q
Sbjct:   37 TMQQQITKHGIIPDVITMQPRNHITVEYSKKVVANFGN---------KLKTPDLKKKPWLQWSADPELYYTLILTDPDSPSRAEPKNREWLLWLVVNIPG--FDVKSGDTIVDYMRP--DAGKGTGSHRFIFLTYQQPSVIYNFNETKVSSREHEGRANFSTQKFCDKYRLGSPWASNFF------HAEWFDKEKDAIENHPGIKKRRKEEMKEAFIEHGLIPHYLHGLPRRDLQVEFKGGKKANFGNVLKPSQTQQTPYLQWSADPDH-YYAVIMIDFDAPDAEHHAWREWLHWMVVNIPSF--DVEAGDILTQYLGPN--PGANTGFHRYIFTVFSQ 351          
BLAST of NO21G02530 vs. NCBI_GenBank
Match: XP_001358906.3 (uncharacterized protein Dpse_GA14723 [Drosophila pseudoobscura pseudoobscura] >EAL28049.3 uncharacterized protein Dpse_GA14723 [Drosophila pseudoobscura pseudoobscura])

HSP 1 Score: 100.5 bits (249), Expect = 1.200e-17
Identity = 98/340 (28.82%), Postives = 155/340 (45.59%), Query Frame = 0
Query:   15 LQSVGLIPSVLPEGFRSTYSINATF-GMLNIDCGAEV-PLHALDDHSPVYSVLEARDEAYYTFILVDPDSPTPEAPHDRELLLHLVTNVPGKQADSRIGEIVVPYRMPSQNQGQSRGVHRYLLAILEQPQGGQQIVHIARPKY----RTNFSIAEYAKLYRFKL-VGATFFYSSWDEAHAQGTNATTAMVRLHDSLEYAKSMLEKANLL--KELVLEGSVHFIVP--------LLLRF---NGETVCAGDEVPSAVADTTPVITFDSEKDQSFYTVVIVDADFPSIHQATDRALLLMLTANIPSSEGDSSVGDVIMHYMSPSSFPGGTGLHRYFVLLLEQ 335
            L+ + +IP V+  G +    +N T+ G +  D G E+ P+   D+    Y    A    YYT +++DPD+P+ + P  RE L  +V N+PG Q    +G++   Y  P+   G   G+HRY+  +  Q Q   +      PK+    R+NF   ++AK Y+    V    F +SW        N+ +   +   +L   K  + K + +   E     + H IVP         LL+     G  V  G E+        P + +D+E  ++ YT+++ D D PS  Q   R     L  NIP ++   + GDV+  Y+     P GTGLHRY  LL +Q
Sbjct:   30 LRHLEVIPDVIEAGPQE--FLNVTYLGFIQADRGVELQPMQVRDE---PYVAWNAPMTNYYTLLMIDPDAPSTQQPSAREKLHWMVLNIPGNQL--IMGDVRAGYVGPTPASGS--GLHRYVFLLYRQ-QDYTKFDFPRLPKHILTGRSNFRSMQFAKRYKLGYPVAGNVFTASWSTDVPALYNSISRGAKQKITLLETKQNISKRSKMSSSEAAECFAKHEIVPDVVPVGPNQLLKVTYGGGVVVDKGAELTPTQVKAQPNVEWDAE-PEALYTLILTDPDAPSRKQPKFREWHHWLVVNIPGTQ--IAKGDVLSEYVGAGP-PEGTGLHRYVFLLFKQ 355          
BLAST of NO21G02530 vs. NCBI_GenBank
Match: XP_017144696.1 (PREDICTED: uncharacterized protein LOC108157238 [Drosophila miranda] >XP_017144697.1 PREDICTED: uncharacterized protein LOC108157238 [Drosophila miranda])

HSP 1 Score: 99.0 bits (245), Expect = 3.400e-17
Identity = 101/350 (28.86%), Postives = 159/350 (45.43%), Query Frame = 0
Query:   15 LQSVGLIPSVLPEGFRSTYSINATF-GMLNIDCGAEV-PLHALDDHSPVYSVLEARDEAYYTFILVDPDSPTPEAPHDRELLLHLVTNVPGKQADSRIGEIVVPYRMPSQNQGQSRGVHRYLLAILEQPQGGQQIVHIARPKY----RTNFSIAEYAKLYRFKL-VGATFFYSSWDEAHAQGTNATTAMVRLHDSLEYAKS----MLE-KANLLKELVLEGS-------VHFIVP--------LLLRF---NGETVCAGDEVPSAVADTTPVITFDSEKDQSFYTVVIVDADFPSIHQATDRALLLMLTANIPSSEGDSSVGDVIMHYMSPSSFPGGTGLHRYFVLLLEQ 335
            L+ + +IP V+  G +    +N T+ G +  D G E+ P+   D+    Y    A    YYT +++DPD+P+ + P  RE L  +V N+PG Q    +G++   Y  P+   G   G+HR++  +  Q Q   +      PK+    R+NF   ++AK Y+    V    F ++W          +T +  L+DS+         +LE K N+ K   +  S        H IVP         LL+     G  V  G E+        P + +D+E  ++ YT+++ D D PS  Q   R     L  NIP ++   + GDV+  Y+     P GTGLHRY  LL +Q
Sbjct:   30 LRHLEVIPDVIEAGPQE--FLNVTYLGFIQADRGVELQPMQVRDE---PYVAWNAPMTNYYTLLMIDPDAPSTQQPSAREKLHWMVLNIPGNQL--IMGDVRAGYVGPTPASGS--GLHRFIFLLYRQ-QDYTKFDFPRLPKHILTGRSNFRSMQFAKRYKLGYPVAGNVFTATW----------STDVPALYDSISRGAKQKIPLLETKQNISKRSKMSSSEAAECFAKHEIVPDVIPVGPNKLLKVTYGGGLVVDKGGELTPTQVKAQPNVEWDAE-PEALYTLILTDPDAPSRKQPKFREWHHWLVVNIPGTQ--IAKGDVLSEYVGAGP-PEGTGLHRYVFLLFKQ 355          
BLAST of NO21G02530 vs. NCBI_GenBank
Match: OXU21480.1 (hypothetical protein TSAR_011841 [Trichomalopsis sarcophagae])

HSP 1 Score: 96.3 bits (238), Expect = 2.200e-16
Identity = 96/373 (25.74%), Postives = 162/373 (43.43%), Query Frame = 0
Query:   12 SQELQSVGLIPSVLPEGFRSTYSINATFGMLNIDCGAEVPLHALDDHSPVYSVLEARDEAYYTFILVDPDSPTPEAPHDRELLLHLVTNVPGKQADSRIGEIVVPYRMPSQNQGQSRGVHRYLLAILEQPQGGQQIVHIAR-----PKYRTNFSIAEYAKLYRFKL-VGATFFYSSWDEAHAQGTNATTAMVRLHDSLEY-AKSMLEKANLLKELVLEGSVHFIVP------LLLRFNG-ETVCAGDEVPSAVADTTPVITFDSEKDQSFYTVVIVDADFPSIHQATDRALLLMLTANIPSSEGDSSVGDVIMHYMSPSSFPGGTGLHRYFVLLLEQHGGILEEG----AVDIPDRRRGFQLHEFMKAHASLE 367
            + + +S  ++P VL        S++    +L        P    D  S  +   ++    +YT  + DPD+P+   P  RE L  LV NVPG+  D   G+ +  Y      +G   G+HRY+L + +QP G   +    R        R  FSI ++A  Y+    +    + + +D+     +     +  L   L   A+ +++ A+L++    EG +  ++       L + +N  E   A +  P+ V D    I +  +   SFYT+++ D D P  H    R  L  L  NIP    D S G+ I+ Y+  S  P  +GLHRY   + EQ  G  +      A  + + R G+ L +F++ H  +E
Sbjct:   22 ASKFKSSEIVPDVLTTAPNDLLSVSFKDKVLRFIGEELTPTQVKDVPSVAW---KSEASGFYTICMTDPDAPSRSEPKVREFLHWLVVNVPGE--DIAKGDTLAAYVGSGPPKG--TGLHRYVLLVYKQPAGKIDVSEEKRIPNNSRDGRPKFSIQKFADKYKLGAPIAGNMYQAEYDDYVPNISKQLDGVCVLSFQLILCARGIVDVADLVERYKKEGLIPDVLDTAPKNFLPVSYNNKEFEFASELTPTEVKDAPTHIGWGLD-SSSFYTLIMNDPDAPFRHDPFMRECLHWLVVNIPGD--DFSKGETIVEYLGASP-PKNSGLHRYTFTVFEQAAGKQDFNETRIAAWLAEGRLGWSLRKFVEKHNLVE 383          
BLAST of NO21G02530 vs. NCBI_GenBank
Match: KYN05899.1 (Phosphatidylethanolamine-binding protein like protein F40A3.3 [Cyphomyrmex costatus])

HSP 1 Score: 89.7 bits (221), Expect = 2.100e-14
Identity = 89/350 (25.43%), Postives = 160/350 (45.71%), Query Frame = 0
Query:    8 AHTTSQELQSVGLIPSVLPEGFRSTYSI-NATFGM-LNIDCGAEVPLHALDDHSPVYSVLEARDEAYYTFILVDPDSPTPEAPHDRELLLHLVTNVPGKQADSRIGEIVVPYRMPSQNQGQSRGVHRYLLAILEQPQG---GQQIVHIARPKYRTNFSIAEYAKLYRF-KLVGATFFYSSWDE-AHAQGTNATTAMVRLHDSLEYAKSMLEKANLLKELVLEGSVHFIVPLLLRFNGETVCAGDEVPSAVADTTPVITFDSEKDQSFYTVVIVDADFPSIHQATDRALLLMLTANIPSSEGDSSVGDVIMHYMSPSSFPGGTGLHRYFVLLLEQHGGILEEGAVDIPDRR 351
            A T   + +   +IP V+ E   +T+SI N T+ +   ++ G E+    + D   V    EA  +A+YT  + DPD+P+ + P  RE    LV N+PG +     GE +  Y        +  G+HRY+  + +QP+     ++ +       R +FSI ++A+ Y+    +    F + +D+            +  +  SL   +S  +KA +  +++ +  +  I    +++  + V  G E+    A   P I +  E     YT+V+ D D P      +R     L  NIP  E + + G+++  Y+ P+  P  TG HRY  L+ +Q+     +GA+   +RR
Sbjct:   52 AKTVQDQYKDYKVIPDVVEE-VPTTFSILNVTYPIDTKVEIGKELAPTQVKDQPHV--KWEADADAFYTLCMTDPDAPSRQNPTKREWHHWLVGNIPGSKVCD--GETLSQY--VGSGPPKDSGLHRYVFLLYKQPEKLTFDEKRLDNRSDANRAHFSIRKFAEKYKLGDPIAGNMFQAKYDDYVDILYKQLGILLCAISFSLGDVESEFKKAKIEPDIIDKAPIEKIE---VKYGKKVVDLGTELTPTEAHEIPEIHYKHE-GGVLYTLVMTDPDVPR-RGGYNREFRHWLVGNIP--EENIAKGEILAEYVGPAP-PKNTGKHRYVFLIYKQN-----QGAITFDERR 381          
BLAST of NO21G02530 vs. NCBI_GenBank
Match: PDM65971.1 (hypothetical protein PRIPAC_44250 [Pristionchus pacificus])

HSP 1 Score: 84.0 bits (206), Expect = 1.100e-12
Identity = 93/333 (27.93%), Postives = 146/333 (43.84%), Query Frame = 0
Query:   67 ARDEAYYTFILVDPDSPTPEAPHDRELLLHLVTNVPGKQADSRIGEIVVPYRMPSQNQGQSRGVHRYLLAILEQPQ-----GGQQIVHIARPKYRTNFSIAEYAKLYRF----KLVGATFF--YSSWDEAHAQGTNATTAMVRLHDSLEYAKSMLEKANLLKELVLEG-SVHFIVPLLLRFNGETVC-----AGDEVPSA-VADTTPVITFDSEK----DQSFYTVVIVDADFPSIHQATDRALLLMLTANIPSSEGDSSVGDVIMHYMSPSSFPGGTGLHRYFVLLLEQHGGI--LEEGAV--DIPDRRRGFQLHEFMKAHASLEAVGATFF 374
            A +++ YT I+ DPD+P+ E P  RE L  LV NV G +   R G  V  Y      +G   G HRY+ ++ +Q +        +IV       R +F   ++A+        K V A FF     + E  +   +   +++    SL +++         + + +E  S H +VP ++    + +C     +G EV    V   T V    S K    +   YT+++ D D PS  +   R     L +NIP    D + GDV+  Y+  S  P  TGLHRY  L+ EQ G I   E G +     D R G++  +F++ H     V   F+
Sbjct:   67 ADEDSLYTVIMADPDAPSRENPSKREFLHWLVVNVKGSRI--RTGNTVTDYIGAGPPEG--TGPHRYVFSVWKQDRKLTADDYGKIVSRTSADGRPHFRTMDFARRATGEKDPKAVAANFFEYIIVYQEGSSSSLSQMVSLISSRLSL-FSRPSTTFIRFARLISMESFSSHGVVPDVISVAPKALCTIKYDSGVEVSEGNVLTPTQVKNAPSVKWNGDNNKLYTLIMTDPDAPSRAEPKYREWHHWLVSNIPGQ--DLAKGDVLSAYVG-SGPPPKTGLHRYIFLIYEQKGRIEDKEHGILTNTSADNRGGWKAAKFVEKHGLGVPVAGNFY 391          
BLAST of NO21G02530 vs. NCBI_GenBank
Match: ADZ05700.1 (flowering locus T a2 [Pisum sativum])

HSP 1 Score: 83.6 bits (205), Expect = 1.500e-12
Identity = 56/172 (32.56%), Postives = 87/172 (50.58%), Query Frame = 0
Query:   18 VGLIPSVLPEGFRSTYSINATFGMLNIDCGAEVPLHALDDHSPVYSVLEARDEAYYTFILVDPDSPTPEAPHDRELLLHLVTNVPGKQADSRIGEIVVPYRMPSQNQGQSRGVHRYLLAILEQPQGGQQIVHIARPKYRTNFSIAEYAKLYRFKLVGATFFYSSWDEAHAQG 190
            VG +   + + F S+  +  T+G  N+  G E+    +  + P  S+       YYT +LVDPD+P+P  P  RE L  +VT++P     S  G  VV Y  P  N     G+HR++  +L Q    +QIV+   P +R NF+  E+ +LY  +L  A  F++   EA + G
Sbjct:   11 VGRVIGDILDPFESSIPLQITYGNRNVSNGCELKPSQV-ANQPQVSIGGNDPVIYYTLVLVDPDAPSPSYPSFREYLHWMVTDIPATTGAS-FGNEVVSYEKPRPN----LGIHRFVFVLLRQQ--CRQIVY--APGWRQNFNTREFVELYNLELPVAAVFFNCQREAGSGG 172          
BLAST of NO21G02530 vs. NCBI_GenBank
Match: XP_015971073.1 (protein FLOWERING LOCUS T-like [Arachis duranensis])

HSP 1 Score: 83.2 bits (204), Expect = 1.900e-12
Identity = 52/173 (30.06%), Postives = 89/173 (51.45%), Query Frame = 0
Query:   18 VGLIPSVLPEGFRSTYSINATFGMLNIDCGAEV-PLHALDDHSPVYSVLEARDEAYYTFILVDPDSPTPEAPHDRELLLHLVTNVPGKQADSRIGEIVVPYRMPSQNQGQSRGVHRYLLAILEQPQGGQQIVHIARPKYRTNFSIAEYAKLYRFKLVGATFFYSSWDEAHAQG 190
            VG +   + + F+ST  +  ++G  ++  G E+ P H  +         + R+  +YT ++VDPD+P+P  P+ RE L  LVT++P        G ++V Y  P      S G+HR++  +  QP  G+Q V+   P +R NF+  E+A+LY      A  F++   E+ + G
Sbjct:   12 VGRVIGDVLDPFQSTIPVRVSYGNRDVTNGCELKPSHVFNQPRVTIGGDDLRN--FYTLVMVDPDAPSPSNPNCREYLHWLVTDIPA-TTGVNFGNVIVNYEKPL----PSMGIHRFVFVLFRQP--GRQTVY--APGWRQNFNTREFAELYNLNSPVAALFFNCQRESGSGG 173          
BLAST of NO21G02530 vs. NCBI_GenBank
Match: CBN73209.1 (flowering locus T protein [Festuca pratensis] >CBN73211.1 flowering locus T protein [Lolium perenne] >CBN73217.1 flowering locus T protein [Lolium perenne])

HSP 1 Score: 82.4 bits (202), Expect = 3.300e-12
Identity = 54/172 (31.40%), Postives = 89/172 (51.74%), Query Frame = 0
Query:   18 VGLIPSVLPEGFRSTYSINATFGMLNIDCGAEVPLHALDDHSPVYSVLEARDEAYYTFILVDPDSPTPEAPHDRELLLHLVTNVPGKQADSRIGEIVVPYRMPSQNQGQSRGVHRYLLAILEQPQGGQQIVHIARPKYRTNFSIAEYAKLYRFKLVGATFFYSSWDEAHAQG 190
            VG +   + + F  T ++  TFG   +  G E+   ++  H P   V       +YT ++VDPD+P+P  P+ RE L  LVT++PG    S  G+ V+ Y  P  N     G+HR++L + +Q   G+Q V+   P +R NF+  ++A+LY      A  +++   EA + G
Sbjct:   11 VGRVVGDVLDPFVRTTNLRVTFGNRAVSNGCELK-PSMVTHQPRVEVGGNEMRTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTGAS-FGQEVMCYESPRPNM----GIHRFVLVLFQQL--GRQTVY--APGWRQNFNTRDFAELYNLGPAVAAVYFNCQREAGSGG 172          
The following BLAST results are available for this feature:
BLAST of NO21G02530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29466.11.300e-11757.18Phosphatidylethanolamine-binding protein PEBP [Nan... [more]
XP_018909050.18.900e-1826.55PREDICTED: uncharacterized protein LOC109038462 [B... [more]
XP_001358906.31.200e-1728.82uncharacterized protein Dpse_GA14723 [Drosophila p... [more]
XP_017144696.13.400e-1728.86PREDICTED: uncharacterized protein LOC108157238 [D... [more]
OXU21480.12.200e-1625.74hypothetical protein TSAR_011841 [Trichomalopsis s... [more]
KYN05899.12.100e-1425.43Phosphatidylethanolamine-binding protein like prot... [more]
PDM65971.11.100e-1227.93hypothetical protein PRIPAC_44250 [Pristionchus pa... [more]
ADZ05700.11.500e-1232.56flowering locus T a2 [Pisum sativum][more]
XP_015971073.11.900e-1230.06protein FLOWERING LOCUS T-like [Arachis duranensis... [more]
CBN73209.13.300e-1231.40flowering locus T protein [Festuca pratensis] >CBN... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL031nonsL031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR092ngnoR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007728NSK007728Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G02530.1NO21G02530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
FTgene1163Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G02530.1NO21G02530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G02530 ID=NO21G02530|Name=NO21G02530|organism=Nannochloropsis oceanica|type=gene|length=1470bp
CCACACACCACACACCATTCTTCCGCCAGTCAGACGGATCACAGAGGCGC
GCGTCGTATCGCGGCTGCCGCGAGACGCTAATGCCACCGAAAAGTATACA
AAAACAGTATTTTAAGTCAAACTCAGCTACTTGTATCAGCCTTAGAGCCC
TGACAGCAGAGAAAGCATCATTTCCAAAAAAATATCAAACCATCATTCAT
TTTTCTGAGAAACGACGTGGATAAATCCACGTCATCTTTGCCACGCAACA
TCGTTTATCTACCCTGACCTACTTTTGTAGACCATAGTACAGCATCGATT
ATTTCAAGCCTCGTAAAGCAATCACATCCAATGAGCAAAACAAAGCAGCA
GGCCCACACTACCTCTCAGGAGCTGCAGAGCGTGGGACTGATTCCTTCCG
TCTTGCCCGAGGGCTTTCGAAGCACTTACTCTATCAATGCCACCTTCGGG
ATGCTTAATATAGACTGTGGGGCTGAAGTACCTTTGCATGCCCTGGATGA
CCATTCCCCAGTCTACTCTGTGTTGGAAGCCCGAGATGAAGCCTACTACA
CATTTATCTTGGTGGACCCAGATTCTCCCACTCCGGAAGCGCCCCACGAC
CGCGAGCTCCTTTTGCACCTGGTCACAAACGTACCAGGAAAGCAAGCAGA
CAGTCGAATTGGTGAGATCGTTGTGCCTTACCGCATGCCAAGCCAGAACC
AGGGTCAGAGCCGCGGCGTGCATCGCTATCTCTTGGCCATCCTGGAGCAA
CCCCAGGGAGGGCAGCAAATTGTGCACATTGCCCGCCCAAAATACCGCAC
CAATTTTTCAATAGCCGAATATGCGAAACTTTACAGGTTTAAACTTGTTG
GAGCGACCTTCTTCTACTCGTCGTGGGACGAGGCTCACGCGCAAGGGACC
AACGCTACAACCGCCATGGTACGGCTGCACGATTCCCTTGAGTACGCCAA
ATCCATGCTGGAGAAGGCAAATCTTCTCAAAGAGCTCGTGTTGGAAGGGA
GCGTACATTTTATCGTGCCCCTCTTACTGAGATTCAATGGAGAGACTGTG
TGTGCAGGGGATGAAGTGCCTTCCGCTGTAGCTGATACCACGCCCGTCAT
AACCTTTGACAGTGAAAAGGATCAGTCATTCTATACGGTGGTGATTGTAG
ATGCGGATTTCCCCTCCATCCATCAGGCCACGGATCGCGCCCTGCTATTG
ATGCTCACAGCGAATATTCCAAGCTCTGAGGGTGACAGTAGCGTGGGGGA
CGTGATTATGCATTACATGTCTCCTTCATCCTTTCCAGGGGGCACGGGGT
TGCATCGTTATTTCGTCTTGCTTCTGGAGCAGCACGGTGGTATTTTGGAG
GAAGGTGCTGTCGATATACCGGATCGCCGCCGAGGATTTCAGCTTCACGA
ATTTATGAAGGCACATGCCAGCCTTGAAGCGGTGGGTGCCACATTCTTTT
TGGGGCGACGCAAGGAGTAA
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protein sequence of NO21G02530.1

>NO21G02530.1-protein ID=NO21G02530.1-protein|Name=NO21G02530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=380bp
MSKTKQQAHTTSQELQSVGLIPSVLPEGFRSTYSINATFGMLNIDCGAEV
PLHALDDHSPVYSVLEARDEAYYTFILVDPDSPTPEAPHDRELLLHLVTN
VPGKQADSRIGEIVVPYRMPSQNQGQSRGVHRYLLAILEQPQGGQQIVHI
ARPKYRTNFSIAEYAKLYRFKLVGATFFYSSWDEAHAQGTNATTAMVRLH
DSLEYAKSMLEKANLLKELVLEGSVHFIVPLLLRFNGETVCAGDEVPSAV
ADTTPVITFDSEKDQSFYTVVIVDADFPSIHQATDRALLLMLTANIPSSE
GDSSVGDVIMHYMSPSSFPGGTGLHRYFVLLLEQHGGILEEGAVDIPDRR
RGFQLHEFMKAHASLEAVGATFFLGRRKE*
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Synonyms
Publications