NO21G02320, NO21G02320 (gene) Nannochloropsis oceanica

Overview
NameNO21G02320
Unique NameNO21G02320
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1109
Alignment locationchr21:698565..699673 -

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Properties
Property NameValue
DescriptionGlutaredoxin-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:698565..699673 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO:0009055electron transfer activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO:0019725cellular homeostasis
GO:0006091generation of precursor metabolites and energy
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR004480Monothiol_GRX-rel
IPR002109Glutaredoxin
Vocabulary: Cellular Component
TermDefinition
GO:0005623cell
Homology
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BLAST of NO21G02320 vs. NCBI_GenBank
Match: EWM22738.1 (glutaredoxin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 231.1 bits (588), Expect = 2.800e-57
Identity = 111/123 (90.24%), Postives = 118/123 (95.93%), Query Frame = 0 
Query:   61 LHAVPDGLLDEDGEPQYDAPTRARIENLIQENKIVLFMKGNRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGEFVGGSDIILEMYQTGELQEMIEIAAAS 184
            L AVP+GLL++DGEPQYDAP RA+IE LI+ NKIVLFMKG RLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQG+F+GGSDIILEMYQTGELQEMIEIAAAS
Sbjct:   76 LRAVPEGLLNDDGEPQYDAPARAKIEELIKNNKIVLFMKGTRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGDFIGGSDIILEMYQTGELQEMIEIAAAS 198
[Close]
BLAST of NO21G02320 vs. NCBI_GenBank
Match: WP_106149257.1 (Grx4 family monothiol glutaredoxin [filamentous cyanobacterium Phorm 46] >PSB24969.1 monothiol glutaredoxin, Grx4 family [filamentous cyanobacterium Phorm 46])

HSP 1 Score: 153.3 bits (386), Expect = 7.300e-34
Identity = 67/100 (67.00%), Postives = 86/100 (86.00%), Query Frame = 0 
Query:   84 RIENLIQENKIVLFMKGNRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGEFVGGSDIILEMYQTGELQEMIEIAAAS 184
            RIE+L+++NKI++FMKGN+L P CGFSNT ++IL+ L V YETVDVLAD+ IR  +K YS WPTIPQ+Y+ GEFVGGSDI++EMYQ GELQE++E+A AS
Sbjct:    7 RIEDLVKQNKIMVFMKGNKLMPQCGFSNTVVQILNTLGVPYETVDVLADQEIRQGVKEYSNWPTIPQVYINGEFVGGSDILIEMYQKGELQEVVEVALAS 106
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BLAST of NO21G02320 vs. NCBI_GenBank
Match: WP_009557009.1 (Grx4 family monothiol glutaredoxin [Oscillatoriales cyanobacterium JSC-12] >EKQ68242.1 monothiol glutaredoxin, Grx4 family [Oscillatoriales cyanobacterium JSC-12])

HSP 1 Score: 152.1 bits (383), Expect = 1.600e-33
Identity = 68/103 (66.02%), Postives = 85/103 (82.52%), Query Frame = 0 
Query:   81 TRARIENLIQENKIVLFMKGNRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGEFVGGSDIILEMYQTGELQEMIEIAAAS 184
            T+ARI+ LIQ NKI++FMKGN+L P CGFSN  ++IL+ L V YETVDVLAD  IR  IK YS WPTIPQ+Y+ GEF+GGSDI++E+YQ GELQ+M+E+A AS
Sbjct:    5 TQARIDELIQSNKIMVFMKGNKLMPQCGFSNNVVQILNVLGVPYETVDVLADPEIRQGIKEYSNWPTIPQVYINGEFIGGSDIMIELYQKGELQQMVEVALAS 107
[Close]
BLAST of NO21G02320 vs. NCBI_GenBank
Match: WP_006634036.1 (Grx4 family monothiol glutaredoxin [Microcoleus vaginatus] >EGK86420.1 glutaredoxin-like protein [Microcoleus vaginatus FGP-2])

HSP 1 Score: 151.4 bits (381), Expect = 2.800e-33
Identity = 65/100 (65.00%), Postives = 85/100 (85.00%), Query Frame = 0 
Query:   84 RIENLIQENKIVLFMKGNRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGEFVGGSDIILEMYQTGELQEMIEIAAAS 184
            RI+ L+++NKI++FMKGN+L P CGFSNT ++IL+ L V YETVDVLAD+ IR  +K YS WPTIPQ+Y+ GEF+GGSDI++EMYQ GELQE++E+A AS
Sbjct:    8 RIDELVKQNKIMVFMKGNKLMPQCGFSNTVVQILNTLGVPYETVDVLADQEIRQGVKEYSQWPTIPQVYINGEFIGGSDIMIEMYQKGELQEVVEVALAS 107
[Close]
BLAST of NO21G02320 vs. NCBI_GenBank
Match: WP_015157299.1 (MULTISPECIES: Grx4 family monothiol glutaredoxin [Cyanobacteria] >AFY90761.1 glutaredoxin-like protein [Chroococcidiopsis thermalis PCC 7203] >PSB43888.1 monothiol glutaredoxin, Grx4 family [Cyanosarcina cf. burmensis CCALA 770] >PSB63929.1 monothiol glutaredoxin, Grx4 family [Chroococcidiopsis cubana CCALA 043] >PSM50128.1 Grx4 family monothiol glutaredoxin [Chroococcidiopsis sp. CCALA 051])

HSP 1 Score: 151.0 bits (380), Expect = 3.600e-33
Identity = 65/102 (63.73%), Postives = 86/102 (84.31%), Query Frame = 0 
Query:   82 RARIENLIQENKIVLFMKGNRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGEFVGGSDIILEMYQTGELQEMIEIAAAS 184
            + R++NL+Q+NKI++FMKGN+L P CGFSN  ++IL+ L V +ETVDVLAD  IR  IK YS WPTIPQ+Y+ G+FVGGSDI++EMYQ+GELQ+M+E+A AS
Sbjct:    6 KERLDNLVQQNKILVFMKGNKLMPQCGFSNNVVQILNTLGVPFETVDVLADSEIRQGIKEYSNWPTIPQVYVNGQFVGGSDILIEMYQSGELQQMVEVALAS 107
[Close]
BLAST of NO21G02320 vs. NCBI_GenBank
Match: WP_012630075.1 (Grx4 family monothiol glutaredoxin [Cyanothece sp. PCC 7425] >ACL47033.1 glutaredoxin-like protein [Cyanothece sp. PCC 7425])

HSP 1 Score: 151.0 bits (380), Expect = 3.600e-33
Identity = 67/102 (65.69%), Postives = 86/102 (84.31%), Query Frame = 0 
Query:   82 RARIENLIQENKIVLFMKGNRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGEFVGGSDIILEMYQTGELQEMIEIAAAS 184
            + RI++L+QENKI++FMKG++L P CGFSNTA++IL+ L V Y TVDVLAD  IR  IK YS WPTIPQ+Y+ GEFVGGSDI++E+YQ GELQ+M+E+A AS
Sbjct:    6 KERIDSLVQENKILVFMKGSKLMPQCGFSNTAVQILNSLGVPYSTVDVLADYDIRQGIKEYSNWPTIPQVYINGEFVGGSDILIELYQNGELQQMVEVALAS 107
[Close]
BLAST of NO21G02320 vs. NCBI_GenBank
Match: XP_009032378.1 (hypothetical protein AURANDRAFT_18629 [Aureococcus anophagefferens] >EGB12728.1 hypothetical protein AURANDRAFT_18629 [Aureococcus anophagefferens])

HSP 1 Score: 150.6 bits (379), Expect = 4.800e-33
Identity = 67/113 (59.29%), Postives = 91/113 (80.53%), Query Frame = 0 
Query:   71 EDGEPQYDAPTRARIENLIQENKIVLFMKGNRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGEFVGGSDIILEMYQTGELQEMIEIAAAS 184
            +D EP  DA T+ RI++++ +N ++LFMKG ++FP CGFSN A++IL+ +  ++ET D L+DE +R  IK +S WPTIPQLY+ GEFVGGSDI+LEMY+ GELQEMIE+AAAS
Sbjct:   35 DDVEPPPDATTK-RIQSMVDDNTVMLFMKGTKIFPQCGFSNMAVQILNAIGQDFETYDCLSDENVRSTIKEFSDWPTIPQLYVDGEFVGGSDIMLEMYEAGELQEMIEVAAAS 146
[Close]
BLAST of NO21G02320 vs. NCBI_GenBank
Match: WP_019505395.1 (Grx4 family monothiol glutaredoxin [Pleurocapsa sp. PCC 7319])

HSP 1 Score: 150.2 bits (378), Expect = 6.200e-33
Identity = 65/106 (61.32%), Postives = 87/106 (82.08%), Query Frame = 0 
Query:   78 DAPTRARIENLIQENKIVLFMKGNRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGEFVGGSDIILEMYQTGELQEMIEIAAAS 184
            ++ T+A+I+ L+ ENKI++FMKG++L P CGFSN  ++IL+ L V YETVD+LAD  IR  IK YS WPTIPQ+Y+ GEFVGGSDI +E+YQ+GELQ+M+E+A AS
Sbjct:    2 NSETKAKIDKLVNENKIMVFMKGSKLMPQCGFSNNVVQILNTLGVPYETVDILADPEIRQGIKEYSNWPTIPQIYINGEFVGGSDIAIELYQSGELQQMVEVALAS 107
[Close]
BLAST of NO21G02320 vs. NCBI_GenBank
Match: XP_002177258.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51721.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 150.2 bits (378), Expect = 6.200e-33
Identity = 65/102 (63.73%), Postives = 87/102 (85.29%), Query Frame = 0 
Query:   81 TRARIENLIQENKIVLFMKGNRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGEFVGGSDIILEMYQTGELQEMIEIAAA 183
            T+ RI+NL++E  ++LFMKGN+LFP CGFSNTA++IL+   +++ETVDVL+D++IR  +K YS WPTIPQLY+ GEF+GGSDI++EMYQ+GEL EMIE A A
Sbjct:   13 TQNRIKNLVEEKPVLLFMKGNKLFPQCGFSNTAVQILESFKIDFETVDVLSDDKIREGVKLYSQWPTIPQLYVAGEFIGGSDIMIEMYQSGELGEMIEKAKA 114
[Close]
BLAST of NO21G02320 vs. NCBI_GenBank
Match: KPQ34288.1 (monothiol glutaredoxin GrxD [Phormidesmis priestleyi Ana])

HSP 1 Score: 149.8 bits (377), Expect = 8.100e-33
Identity = 65/103 (63.11%), Postives = 84/103 (81.55%), Query Frame = 0 
Query:   81 TRARIENLIQENKIVLFMKGNRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQLYLQGEFVGGSDIILEMYQTGELQEMIEIAAAS 184
            T+ARI++L+ ENK+++FMKGN+L P CGFSN  ++IL+ L V YETVDVLAD  IR  IK YS WPTIPQ+Y+ GEF+GGSDI+++MYQ G LQE +E+A AS
Sbjct:    5 TKARIDSLVNENKVMIFMKGNKLMPQCGFSNNVVQILNTLGVPYETVDVLADPEIRQGIKEYSNWPTIPQVYINGEFIGGSDILIKMYQDGNLQETVEVALAS 107
The following BLAST results are available for this feature:
BLAST of NO21G02320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22738.12.800e-5790.24glutaredoxin-like protein [Nannochloropsis gaditan... [more]
WP_106149257.17.300e-3467.00Grx4 family monothiol glutaredoxin [filamentous cy... [more]
WP_009557009.11.600e-3366.02Grx4 family monothiol glutaredoxin [Oscillatoriale... [more]
WP_006634036.12.800e-3365.00Grx4 family monothiol glutaredoxin [Microcoleus va... [more]
WP_015157299.13.600e-3363.73MULTISPECIES: Grx4 family monothiol glutaredoxin [... [more]
WP_012630075.13.600e-3365.69Grx4 family monothiol glutaredoxin [Cyanothece sp.... [more]
XP_009032378.14.800e-3359.29hypothetical protein AURANDRAFT_18629 [Aureococcus... [more]
WP_019505395.16.200e-3361.32Grx4 family monothiol glutaredoxin [Pleurocapsa sp... [more]
XP_002177258.16.200e-3363.73predicted protein [Phaeodactylum tricornutum CCAP ... [more]
KPQ34288.18.100e-3363.11monothiol glutaredoxin GrxD [Phormidesmis priestle... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL027nonsL027Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR090ncniR090Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006268NSK006268Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G02320.1NO21G02320.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|616044gene_11731Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100209g2gene7706Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G02320.1NO21G02320.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G02320 ID=NO21G02320|Name=NO21G02320|organism=Nannochloropsis oceanica|type=gene|length=1109bp
ACAGACCGGAACGGTGCCCGCTAAGATCGATCACAAGCGAGCAAGCAAAG
CAATTATGCCTCGTCCGCGCCCTTCAGTCTTCATTTCCTCTACCTTGATC
CTCCTACGCCTGCTCTTATCCCTTACCACCACCACCACCATCACGCACGC
TTTCTTCCTCCCCTCCTCCCCTTCCCCAGCCCCTGCTCCCCGCCCCCTCC
CCTCCCTCTCCCTCCCTTCCTACCCCCTTGCCCCCCTCCATGCCGTTCCC
GATGGCCTCTTGGACGAAGACGGAGAGCCGCAATACGATGCCCCCACCCG
TGCTAGGATTGAAAATTTGATCCAAGAGAACAAAATCGTCCTGTTTATGA
AAGGCAATCGTTTGTTTCCGTCGTGCGGGTTTAGCAACACCGCCATCCGG
ATCTTGGATCAGTTGAATgtaagtggaaagaagagagacgaccggagaga
cggtggattcattgtaaagtgtgcagtttgagcccctcggtgcggcctgc
tcacccgtctgtctctccgtacttatactcccaattcccttgcgtgcatc
gcccctcactttccctccctcactccctccctccctcagGTAGAATACGA
GACAGTGGACGTGTTAGCCGACGAACGTATCCGTGGGGAGATTAAAAGgt
acctctcttcctccctccttttttccctccctcctttcctctgactccac
tgtcaagtcagacggtttctagaagcgtgcactcatcctcaccgcccccc
ccctcactccagGTACAGCGCCTGGCCCACCATCCCCCAGCTATATCTTC
AGGGAGAATTCGTCGgtacgtctgactgtgtgctccctccctccctccct
cccctccttcccctcctctttcccttccctccctcccccctccttgaact
cctccctcctcctccaggcgggtcaaacattattctcagagcccaccatc
ctctttctccctcctttcctccttaactcctttcctccctccctccccct
tccccagGCGGATCAGACATCATCCTCGAGATGTATCAGACAGGCGAGCT
TCAAGAAATGATTGAGATCGCGGCAGCTTCCTGAGGGAGGGAGGGAGGGG
GAGAGGGAG
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protein sequence of NO21G02320.1

>NO21G02320.1-protein ID=NO21G02320.1-protein|Name=NO21G02320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=184bp
MPRPRPSVFISSTLILLRLLLSLTTTTTITHAFFLPSSPSPAPAPRPLPS
LSLPSYPLAPLHAVPDGLLDEDGEPQYDAPTRARIENLIQENKIVLFMKG
NRLFPSCGFSNTAIRILDQLNVEYETVDVLADERIRGEIKRYSAWPTIPQ
LYLQGEFVGGSDIILEMYQTGELQEMIEIAAAS*
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Synonyms
Publications