NO21G02270, NO21G02270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO21G02270 vs. NCBI_GenBank
Match: EWM22739.1 (hypothetical protein Naga_100209g9 [Nannochloropsis gaditana]) HSP 1 Score: 314.7 bits (805), Expect = 3.500e-82 Identity = 177/352 (50.28%), Postives = 231/352 (65.62%), Query Frame = 0 Query: 1 MRFIASSRSLLLAATAAALCLPSALAH--ITVEDNFLDEAAREDILAQLPGQT-RFKHTLDVPGQLYQRLMSIINPSNTDLSHTETSVPAKGEGRFVPAHKDVFEDNALADGQVGLVYLEGDGRMLFQHEVTGEETVVDVQPGRLMSWDNSVYTHTLIPGDLPRRILGPMAFRDGEMQSIGDQAPRVVAQARTNSLTVRPGGIIRVGLSFVVLDVDGNAASASVKRAVRKLENKDLVIGCGLMD-QNRRMLGGRNKTTNANDD-----ITFVNSKLKPNFYKPKLTFN--NTLDAVYWTLPSETTKILHPYKITWAFRVGKGVPSGTVVPIGVVIEDDNTPEFLVELRVLVK 342 M SSR LL AT A LCL S+ +H I VEDNF+DE RE +LAQLP + RFKHT+DVPG +Y+RL+S+++P N+++ ++ + PAKG+ V AHKD FED++LAD QVGLVYLEGDGRM +++VTGEET++DV+PGR +SWDN YTH L+ G +PRRILGPMAFRDG QSIGD R + QAR + L R G +RV VVLD KRAVR LE D+V C L N + L NKT+ D I+F SK+ PN ++PK+T+ + D + WTLPS+ T++L YKIT R+GK VPSGTV+P+ + + E+ EL V+VK Sbjct: 1 MPLFVSSRYLLSIAT-AVLCLTSSFSHAKIVVEDNFIDETTREALLAQLPSEMHRFKHTVDVPGNVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSIGDDPNRFIIQARAHHLFARAGKTVRVTADLVVLD----DQPIGRKRAVRALETDDIVFACSLDPFFNFQSLTTGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPF----EWEQELGVVVK 343
BLAST of NO21G02270 vs. NCBI_GenBank
Match: EWM22729.1 (hypothetical protein Naga_100561g2 [Nannochloropsis gaditana] >EWM22730.1 hypothetical protein Naga_100561g2 [Nannochloropsis gaditana]) HSP 1 Score: 302.0 bits (772), Expect = 2.400e-78 Identity = 172/353 (48.73%), Postives = 230/353 (65.16%), Query Frame = 0 Query: 1 MRFIASSRSLLLAATAAALCLPS--ALAHITVEDNFLDEAAREDILAQLPGQT-RFKHTLDVPGQLYQRLMSIINPSNTDLSHTETSVPAKGEGRFVPAHKDVFEDNALADGQVGLVYLEGDGRMLFQHEVTGEETVVDVQPGRLMSWDNSVYTHTLIPGDLPRRILGPMAFRDGEMQSI-GDQAPRVVAQARTNSLTVRPGGIIRVGLSFVVLDVDGNAASASVKRAVRKLENKDLVIGCGLMD-QNRRMLGGRNKTTNANDD-----ITFVNSKLKPNFYKPKLTFN--NTLDAVYWTLPSETTKILHPYKITWAFRVGKGVPSGTVVPIGVVIEDDNTPEFLVELRVLVK 342 M SSR LL AT AALCL S + A I VEDNF+DE R+ +LAQLP + RFKHT+D+PG++Y+RL+S+++P N+++ ++ + PAKG+ V AHKD FED++LAD QVGLVYLEGDGRM +++VTGEET++DV+PGR +SWDN YTH L+ G +PRRILGPMAFRDG QSI G R + QAR + L R G +RV VVLD +RAVR L D+V C L N + L NKT+ D I+F SK+ PN ++PK+T+ + D + WTLPS+ T++L YKIT R+GK VPSGT++P+ + + E+ EL V+VK Sbjct: 1 MPLFVSSRYLLSIAT-AALCLTSSFSFAKIVVEDNFIDETTRDALLAQLPSEMHRFKHTVDLPGKVYKRLLSVLHPENSEVFPSQLTAPAKGQKGMVAAHKDTFEDSSLADRQVGLVYLEGDGRMQLKNDVTGEETIIDVKPGRFLSWDNRHYTHQLLAGSMPRRILGPMAFRDGGFQSIGGGDRNRFIIQARAHPLFARAGKTVRVTADLVVLD-----DQPGRERAVRALPTADIVFACSLDPFFNFQSLTAGNKTSKHRKDGTDVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYLSVPS----EWEQELGVVVK 343
BLAST of NO21G02270 vs. NCBI_GenBank
Match: EWM30157.1 (hypothetical protein Naga_100115g3 [Nannochloropsis gaditana]) HSP 1 Score: 70.5 bits (171), Expect = 1.200e-8 Identity = 48/143 (33.57%), Postives = 71/143 (49.65%), Query Frame = 0 Query: 183 RVVAQARTNSLTVRPGGIIRVGLSFVVLDVDGNAASASVKRAVRKLENKDLVIGCGLMDQNRRMLGGRNKTTNANDDITFVNSKLKPNFYKPKLTFNNT-LDAVYWTLPSETTKILHPYKITWAFRVGKGVPSGTVVPIGVVI 325 +V+AQA L VRPGG I L+FVV NA ++ L ++L L ++NR G + AN ++ S++ PN ++PKL N + +V W +P E T + YK+ RVGKGV TV + V + Sbjct: 28 QVIAQAMVKPLAVRPGGRITATLNFVVSSFASNATDPAIAVGFATLGAQEL---AALNNKNRTTKGKASMDPLAN-ELVIRGSRISPNKWRPKLRTNESEWYSVAWGIPKEGTLLKKVYKVVCKIRVGKGVERNTVRKVSVTL 166 The following BLAST results are available for this feature:
BLAST of NO21G02270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 3
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G02270 ID=NO21G02270|Name=NO21G02270|organism=Nannochloropsis oceanica|type=gene|length=1338bpback to top protein sequence of NO21G02270.1 >NO21G02270.1-protein ID=NO21G02270.1-protein|Name=NO21G02270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=342bpback to top Synonyms
Publications
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