NO21G02180, NO21G02180 (gene) Nannochloropsis oceanica

Overview
NameNO21G02180
Unique NameNO21G02180
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1300
Alignment locationchr21:643645..644944 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:643645..644944 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G02180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Position :
0
Zoom :
x 1
1002003004005006007008009001000110012001300Sequence
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR040ncniR040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G02180.1NO21G02180.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G02180.1NO21G02180.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G02180 ID=NO21G02180|Name=NO21G02180|organism=Nannochloropsis oceanica|type=gene|length=1300bp
GGGAGGGAGAGTTTTCAATAGAAGACAGAGGTCGCTCCTTGGTACAAGCT
TTTTATTCTCATCCTGCTGCTTCTACTGCTGCTGCTGCTGAGTATGGTGG
TCGTAGTGGAGGGCTTACAACATCTCATTGCACGGAGTTCGATGGATCGG
TGTCGGTGTGTGGGGGCGTTAGGAAATGCTTCCTTACTTGCGCGACACTC
AAAGCCTTGCCTTGTGTGTTCTCACATCAATCCCTCACCTTCACCATATG
CATAGGCGACTACGTGCGACAGTACTCCCCCCCACCTTCGATCTATTTGT
TGGGTACAATACCAACCTGCACGGCACAAAAAAATGAAGCACGACTAGCT
GCAAGCAACCGAGGGAGGAGGTCACGACCCGGTATGCTCCGACTCCGCCC
GCTCCCATGCCTCGACCTCACCCTACGACTACGACGACCACCACCACTGA
CAGCTGCAGCATCATGGAGAAGAGCAACGGCTCAAATACATGCCAGGATG
TTTTTAGTTGTCGGTGGCTTGCGACGATGGCAACGGCATGAGgtatgtgc
atcttgaacccttccctccctcccctccctccctccctccctccctccac
ccttctcttacactcatccgtcgtccctcccatcaacacgagacttggtc
tccatttattatcgcgacaggtatcagtatatctcagttaccacagacat
ttttagaggcacgttggtaaagggtttttttcaccctccctccccccctc
cctcccttccttcctccctccctccttcgatcgatcctgcagGACGAGAT
GGCCATGCTGGAAGCGATCCAACGCCAAGAGGAAGAACAGCGACGAATGC
CTATCATCCGAGCCGGGGGGAAGGAGGAAGGGAAGAAGGGAGGGAAGGAG
AAGGAGGAGACGACGCCTTTGGTAGTGTGGGGGGAAGACGGGGAGCTGTG
TTTTGTGGAGCAAGGAGGGAAGGAGGGAGGGAAGGAGGGAGGGAAAGAGG
AGGATGAGAAAGGGAAGGAAGGGAAAGAGAGAAAGAGGAAGTAGAAGAAA
TGAAAGGCGACCAAGGGATGACACTCCCGGTGATGGGGTTAGTCACAAAA
AGTGACTGGTTGAATGATTGAAGAGGATCAAATGAATCTTACAAATTGGA
CAGAGTCTGGATTAAGATGTGTTAGATGAAGACCAAAACTGGAGTGTGTT
CATACCGGCTTATAAGCAACAAAAAAGAAGACAAAAACGAACAAATTGAT
CGATCACTGAGACGAATTCTTACTTTCTTTCGCGTTCTCTTCCTCCCTCC
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protein sequence of NO21G02180.1

>NO21G02180.1-protein ID=NO21G02180.1-protein|Name=NO21G02180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=137bp
MLRLRPLPCLDLTLRLRRPPPLTAAASWRRATAQIHARMFLVVGGLRRWQ
RHEDEMAMLEAIQRQEEEQRRMPIIRAGGKEEGKKGGKEKEETTPLVVWG
EDGELCFVEQGGKEGGKEGGKEEDEKGKEGKERKRK*
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Synonyms
Publications