NO21G02060, NO21G02060 (gene) Nannochloropsis oceanica

Overview
NameNO21G02060
Unique NameNO21G02060
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3394
Alignment locationchr21:606779..610172 -

Link to JBrowse

Properties
Property NameValue
DescriptionRNA (C5-cytosine) methyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:606779..610172 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0016740transferase activity
GO:0008168methyltransferase activity
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR001678MeTrfase_RsmB/NOP2
IPR023267RCMT
Vocabulary: Biological Process
TermDefinition
GO:0032259methylation
Homology
BLAST of NO21G02060 vs. NCBI_GenBank
Match: XP_003081265.2 (RNA (C5-cytosine) methyltransferase [Ostreococcus tauri] >CEF99099.1 RNA (C5-cytosine) methyltransferase [Ostreococcus tauri])

HSP 1 Score: 186.8 bits (473), Expect = 2.700e-43
Identity = 149/408 (36.52%), Postives = 197/408 (48.28%), Query Frame = 0
Query:  405 TFDWPDEETQPAFALAARGSLPLWLSRQWGGQYGWQEAAALAAEANRPGPVTLRWNQMKGGKEEGKGDMWKSTEAQLENSSXXXXXXXXXXXXXXXXXXXXRLAQEGVQGAEPCRWSPVGVRLSRGRPPH-GLWGLAAWREGWFEVQDEGSQLVALATGVGRQGGKGGEHVLDICAGNGGKSLAMGSLMWGGRDXXXXXXXXXXLWVYDTHQSRLKHLEAGARRAGMGGLVRVLESEEALDALLSPETKKGAREEGKEEGRCDVVLVDAPCSSSGVLRRRPSLRWTLKPEDALVTLPAIQRALLTQAQAHVKVGGRLVYATCSLLKEENEEVVAWFLEQYGEGGKEXXXXGRFRALPWQGEEEAPLRAAAQAWRDRNGGEGKREELAPGTLQLLPHVHGTDGFYMARF 812
            T +W    T  A  ++   ++P+ L+  +   YG  EA  LA   N PGPV  R N  +   EE                                     RL Q+G++ A P R++     L  G P + G++G+ AWREGWFEVQDEGSQL+  A        K GE VLD CAGNGGK+LA+ + M  G            + V+D  + RL HLEA A RAG   +V  ++     D  L+P++              D VLVDAPCSS G LRR PSLR      D    L  IQ  +L +A A VK GGRLVYATCS+L  EN EVV  F  ++ +          +  LP+   ++A + A+ +  RDR   E +R         LLPH+HGTDGF++ARF
Sbjct:  188 TVEW---STDGAMKISELSAIPVPLAEMFVRDYGDDEALRLARAMNEPGPVMCRANVARCSVEE----------------------------------CAERLEQDGLKIA-PARFATHAFALVNGAPANGGIFGVNAWREGWFEVQDEGSQLIVAAL-----EAKAGERVLDACAGNGGKTLAIAAEMKFGE-----------VCVFDIDRRRLAHLEANAERAGSRDMVTTVQGTSLQD--LAPQS-------------FDAVLVDAPCSSVGALRRTPSLR---HMHDDPNELAKIQLGILREAAALVKPGGRLVYATCSVLSFENHEVVRAFESEFAD---------IYEPLPF---DDAFIAASRE--RDR---EHER--------SLLPHLHGTDGFFIARF 498          
BLAST of NO21G02060 vs. NCBI_GenBank
Match: WP_018911809.1 (RsmB/NOP family class I SAM-dependent RNA methyltransferase [Thiomonas sp. FB-6])

HSP 1 Score: 180.3 bits (456), Expect = 2.500e-41
Identity = 142/401 (35.41%), Postives = 188/401 (46.88%), Query Frame = 0
Query:  420 AARGSLPLWLSRQWGGQYGWQEAAALAAEANRPGPVTLRWNQMKGGKEEGKGDMWKSTEAQLENSSXXXXXXXXXXXXXXXXXXXXRLAQEGVQGAEPCRWSPVGVRLSRGRPPHGLWGLAAWREGWFEVQDEGSQLVALATGVGRQGGKGGEHVLDICAGNGGKSLAMGSLMWGGRDXXXXXXXXXXLWVYDTHQSRLKHLEAGARRAGMGGLVRVLESEEALDALLSPETKKGAREEGKEE--GRCDVVLVDAPCSSSGVLRRRPSLRWTLKPEDALVTLPAIQRALLTQAQAHVKVGGRLVYATCSLLKEENEEVVAWFLEQYGEGGKEXXXXGRFRALPWQGEEEAPLRAAAQAWRDRNGGEGKREELAPGTLQ-----LLPHVHGTDGFYMARFER 814
            A R SLP WL+ QW  Q G  E  ALAA   RP P+ LR N +KG +E+ +                                    L ++G+  +EP   SP G+R+ RG+P   L   AA+ +G  EVQDEGSQL+AL     R     GE V+D CAG GGK+LA+G++M G             L+ +D  Q+RL+ L     R+G+  +               P   +G R+E  +   G+ D VLVDAPCS  G LRR P L+W    E  +  L   Q A+L QA   +K GGRLVYATCSLL++EN++VV  FL+                              A   WR  + GE  R++  PG L+     L P  HGTDGF+ A  ER
Sbjct:  126 AVRYSLPDWLASQWQRQCG-AEFEALAASLLRPAPLDLRANLLKGTREQAR----------------------------------EALREQGID-SEPTPLSPWGLRV-RGKP--ALQRSAAFEQGLVEVQDEGSQLLALLLAPRR-----GEMVVDFCAGAGGKTLALGAMMRGS----------GRLYAFDVSQARLERLRPRLARSGLSNVY--------------PVAIRGERDERVQRLAGKIDRVLVDAPCSGVGTLRRNPDLKWR-SSEAEVPRLAGQQAAILAQAARLLKPGGRLVYATCSLLEQENQQVVQAFLD------------------------------AHPGWRLLDAGEWWRQQQLPGPLEGPWLRLWPQRHGTDGFFAALIER 427          
BLAST of NO21G02060 vs. NCBI_GenBank
Match: OUS48866.1 (S-adenosyl-L-methionine-dependent methyltransferase [Ostreococcus tauri])

HSP 1 Score: 176.4 bits (446), Expect = 3.600e-40
Identity = 128/307 (41.69%), Postives = 167/307 (54.40%), Query Frame = 0
Query:  506 RLAQEGVQGAEPCRWSPVGVRLSRGRPPH-GLWGLAAWREGWFEVQDEGSQLVALATGVGRQGGKGGEHVLDICAGNGGKSLAMGSLMWGGRDXXXXXXXXXXLWVYDTHQSRLKHLEAGARRAGMGGLVRVLESEEALDALLSPETKKGAREEGKEEGRCDVVLVDAPCSSSGVLRRRPSLRWTLKPEDALVTLPAIQRALLTQAQAHVKVGGRLVYATCSLLKEENEEVVAWFLEQYGEGGKEXXXXGRFRALPWQGEEEAPLRAAAQAWRDRNGGEGKREELAPGTLQLLPHVHGTDGFYMARF 812
            RL Q+G++ A P R++     L  G P + G++G+ AWREGWFEVQDEGSQL+  A        K GE VLD CAGNGGK+LA+ + M  G            + V+D  + RL HLEA A RAG   +V  ++     D  L+P++              D VLVDAPCSS G LRR PSLR      D    L  IQ  +L +A A VK GGRLVYATCS+L  EN EVV  F  ++ +          +  LP+   ++A + A+ +  RDR   E +R         LLPH+HGTDGF++ARF
Sbjct:   24 RLEQDGLKIA-PARFATHAFALVNGAPANGGIFGVNAWREGWFEVQDEGSQLIVAAL-----EAKAGERVLDACAGNGGKTLAIAAEMKFGE-----------VCVFDIDRRRLAHLEANAERAGSRDMVTTVQGTSLQD--LAPQS-------------FDAVLVDAPCSSVGALRRTPSLR---HMHDDPNELAKIQLGILREAAALVKPGGRLVYATCSVLSFENHEVVRAFESEFAD---------IYEPLPF---DDAFIAASRE--RDR---EHER--------SLLPHLHGTDGFFIARF 270          
BLAST of NO21G02060 vs. NCBI_GenBank
Match: WP_011984620.1 (methyltransferase domain-containing protein [Anaeromyxobacter sp. Fw109-5] >ABS24514.1 Fmu (Sun) domain protein [Anaeromyxobacter sp. Fw109-5])

HSP 1 Score: 176.0 bits (445), Expect = 4.700e-40
Identity = 143/423 (33.81%), Postives = 197/423 (46.57%), Query Frame = 0
Query:  396 LPLSPSALATFDWPDEE----TQPAFALAARGSLPLWLSRQWGGQYGWQEAAALAAEANRPGPVTLRWNQMKGGKEEGKGDMWKSTEAQLENSSXXXXXXXXXXXXXXXXXXXXRLAQEGVQGAEPCRWSPVGVRLSRGRPPHGLWGLAAWREGWFEVQDEGSQLVALATGVGRQGGKGGEHVLDICAGNGGKSLAMGSLMWGGRDXXXXXXXXXXLWVYDTHQSRLKHLEAGARRAGMGGL-VRVLESEEALDALLSPETKKGAREEGKEEGRCDVVLVDAPCSSSGVLRRRPSLRWTLKPEDALVTLPAIQRALLTQAQAHVKVGGRLVYATCSLLKEENEEVVAWFLEQYGEGGKEXXXXGRFRALPWQGEEEAPLRAAAQAWRDRNGGEGKREELAPGTLQLLPHVHGTDGFYMARFER 814
            L + P+ALA     +      T+P   L+   SLP W++ ++  + G  EA  LAA  N   P+T+R N +K  +EE +G                                  +L  EG+  +EP R+SP G+ L   +     + L ++R+G FE+QDEGSQL+ALA      G + G+ V+D CAG GGKSLA+   M               L   DT + RL   +  ARRAG+  L  RV+ +    +A L+              G+ DVVLVDAPCS  G LRR+P  RW L PED       IQR L+ +  A ++ GGRLVYATCS+ K EN ++  +   + G               P  GEE A             G +G R       L+L PH HGTDGF++A FE+
Sbjct:  103 LAVPPAALAGLASAEARLAAVTEPVERLSLEASLPSWIAERFVRELGEVEARTLAAAMNARAPLTVRANLLKIDREELRG----------------------------------KLGSEGM-ASEPTRFSPWGLVLDGHQ---NAFALGSFRDGLFEIQDEGSQLIALAC-----GARPGKTVVDACAGAGGKSLALAMEM----------RNKGSLHALDTDEGRLDDAKKRARRAGVHNLRARVIAAGAEAEAQLADLA-----------GQADVVLVDAPCSGLGTLRRKPDARWRLTPEDP-ERFAGIQRTLVRRFAALLRPGGRLVYATCSVGKTENGDIADYAEREVG--------LAPVPLAPLLGEERAKAL----------GVDGAR-------LELFPHRHGTDGFFVAAFEK 435          
BLAST of NO21G02060 vs. NCBI_GenBank
Match: WP_104230390.1 (RsmB/NOP family class I SAM-dependent RNA methyltransferase [Solimonas sp. HR-BB] >PPE73875.1 SAM-dependent methyltransferase [Solimonas sp. HR-BB])

HSP 1 Score: 174.9 bits (442), Expect = 1.000e-39
Identity = 143/395 (36.20%), Postives = 179/395 (45.32%), Query Frame = 0
Query:  420 AARGSLPLWLSRQWGGQYGWQEAAALAAEANRPGPVTLRWNQMKGGKEEGKGDMWKSTEAQLENSSXXXXXXXXXXXXXXXXXXXXRLAQEGVQGAEPCRWSPVGVRLSRGRPPHGLWGLAAWREGWFEVQDEGSQLVALATGVGRQGGKGGEHVLDICAGNGGKSLAMGSLMWGGRDXXXXXXXXXXLWVYDTHQSRLKHLEAGARRAGMGGLVRV-LESEEALDALLSPETKKGAREEGKEEGRCDVVLVDAPCSSSGVLRRRPSLRWTLKPEDALVTLPAIQRALLTQAQAHVKVGGRLVYATCSLLKEENEEVVAWFLEQYGEGGKEXXXXGRFRALPWQGEEEAPLRAAAQAWRDRNGGEGKREELAPGTLQLLPHVHGTDGFYMARFER 814
            A R +LP     +   QYG    AALA        V LR N++K  +E  +                                   RLAQEGV+ AEP   SP+G+RLS   P   L  LA++REGW E QDEGSQL+AL       G + G+ V+D CAG GGK+LA+ + M               L   D   +RLK L    +RAG+  +V + L  E AL                K  GRCD VLVDAPCS++G  RR P LR     E     L A+Q  +L  A    + GGRLVYATCSL+  EN+EVV  FLEQ+ E  +E              +    LRAA   W++               L+LLP  HGTDGFY   F R
Sbjct:  128 AQRDNLPQACHERLVAQYGEDATAALAQALRGQAQVDLRVNRLKATREAAR----------------------------------QRLAQEGVK-AEPTPRSPLGLRLSARAP---LQNLASFREGWVEPQDEGSQLIALLV-----GARPGDTVVDYCAGAGGKTLALAAQM----------QDRGELLACDISAARLKKLRPRLQRAGVNSVVGLALPDETAL---------------AKFAGRCDAVLVDAPCSATGTWRRNPELRLR---EPDFAALQALQLRILGDAARLPRAGGRLVYATCSLMAVENDEVVRAFLEQHPEYVRE--------------DAGEILRAAGADWQEPE-------------LRLLPQRHGTDGFYAVAFRR 424          
BLAST of NO21G02060 vs. NCBI_GenBank
Match: WP_045835395.1 (RsmB/NOP family class I SAM-dependent RNA methyltransferase [Hyphomicrobium sp. 99])

HSP 1 Score: 172.6 bits (436), Expect = 5.200e-39
Identity = 137/401 (34.16%), Postives = 182/401 (45.39%), Query Frame = 0
Query:  422 RGSLPLWLSRQWGGQYGWQEAAALAAEANRPGPVTLRWNQMKGGKEEGKGDMWKSTEAQLENSSXXXXXXXXXXXXXXXXXXXXRLAQEGVQGAEPCRWSPVGVRLSRGRPPHG------LWGLAAWREGWFEVQDEGSQLVALATGVGRQGGKGGEHVLDICAGNGGKSLAMGSLMWGGRDXXXXXXXXXXLWVYDTHQSRLKHLEAGARRAGMGGLVRVLESEEALDALLSPETKKGAREEGKEEGRCDVVLVDAPCSSSGVLRRRPSLRWTLKPEDALVTLPAIQRALLTQAQAHVKVGGRLVYATCSLLKEENEEVVAWFLEQYGEGGKEXXXXGRFRALPWQGEEEAPLRAAAQAWRDRNGGEGKREELAPG---TLQLLPHVHGTDGFYMARFER 814
            +  +P WL   + GQ+G +  A   A A R  P  LR N +K  +E                                       L      GAEPC  SP GVR+    PP G      L   AA++ GWFE+QDEGSQ+ AL +G G +     + VLD+CAG GGK++A+ ++M               L+ YD  +++LK +    +RAG+  L  +   +EA    L P              R DVVL DAPC+ +G  RRRP  +W +KPE AL    A QR +L +A A VK GGRLVY TCSLL EEN E +A FL               F A+P            A+ W   + G G   + A G   +L L P +HGTDGF++A   R
Sbjct:  122 QADIPEWLWPAFSGQFGERAIAEGQAMARR-APADLRVNTLKSTRER-------------------------------------VLKALASFGAEPCAISPTGVRVP---PPVGAQRTPNLQAEAAFQAGWFEIQDEGSQVAALLSGAGPR-----KQVLDLCAGAGGKTMALAAMM----------QNTGQLYAYDADRNQLKPIFERVKRAGVRNLQVLRAGDEAAVDALGP--------------RFDVVLADAPCTGTGTWRRRPDAKWKVKPE-ALTARMAEQRTVLKRAAALVKPGGRLVYVTCSLLPEENTEQIARFLAD----------NAAFTAVP-----------IAEVW---DAGSGDLPQSADGRTDSLLLTPGLHGTDGFFIAVLAR 427          
BLAST of NO21G02060 vs. NCBI_GenBank
Match: WP_046847012.1 (RsmB/NOP family class I SAM-dependent RNA methyltransferase [Hyphomicrobium sp. GJ21] >CEJ86194.1 putative SUN-family protein, RNA methyltransferase [Hyphomicrobium sp. GJ21])

HSP 1 Score: 172.2 bits (435), Expect = 6.800e-39
Identity = 139/399 (34.84%), Postives = 186/399 (46.62%), Query Frame = 0
Query:  420 AARGSLPLWLSRQWGGQYGWQEAAALAAEANRPGPVTLRWNQMKGGKEEGKGDMWKSTEAQLENSSXXXXXXXXXXXXXXXXXXXXRLAQEGVQGAEPCRWSPVGVRLSRGRPPHG------LWGLAAWREGWFEVQDEGSQLVALATGVGRQGGKGGEHVLDICAGNGGKSLAMGSLMWGGRDXXXXXXXXXXLWVYDTHQSRLKHLEAGARRAGMGGLVRVLESEEALDALLSPETKKGAREEGKEEGRCDVVLVDAPCSSSGVLRRRPSLRWTLKPEDALVTLPAIQRALLTQAQAHVKVGGRLVYATCSLLKEENEEVVAWFLEQYGEGGKEXXXXGRFRALPWQGEEEAPLRAAAQAWRDRNGGEGKREELAPG---TLQLLPHVHGTDGFYMA 810
            AAR  +P WL   +  Q+G    A   A A R  P  LR N +K  +E       K  +A L                                GA PC  SP+G+R+    PP G      L   AA++ GWFE+QDEGSQ+ AL +G G +     + VLD+CAG GGK+LA+ +LM               L+ YD  +++LK +    +RA +  +  +   +E   A L P              R DVVL DAPC+ +G  RRRP  +W LKPE AL    A QR++L +A + VK GG++VY TCS+L EEN E VA FL+ + +          FR +P            A AW    G  G+  E A G   TL L P  HGTDGF++A
Sbjct:  120 AARADIPEWLWPSFSAQFGGNAVAEGEAMARR-APADLRVNTLKSTQE-------KVLKALLP------------------------------FGAAPCPISPIGIRVP---PPSGAQRTPNLQAEAAFQAGWFEIQDEGSQIAALLSGAGPR-----KQVLDLCAGAGGKTLALAALM----------QNTGQLYAYDADRNQLKPIFDRIKRANVRNVQVLRAGDETALAALGP--------------RFDVVLADAPCTGTGTWRRRPDAKWRLKPE-ALAARQAEQRSVLERAASLVKPGGQIVYVTCSILPEENVEQVAAFLDAHRD----------FRIVP-----------TADAWA-AAGVAGEVPESADGRSDTLLLSPGRHGTDGFFIA 425          
BLAST of NO21G02060 vs. NCBI_GenBank
Match: OGI42312.1 (hypothetical protein A2V92_06075 [Candidatus Muproteobacteria bacterium RBG_16_65_31])

HSP 1 Score: 172.2 bits (435), Expect = 6.800e-39
Identity = 140/407 (34.40%), Postives = 182/407 (44.72%), Query Frame = 0
Query:  410 DEETQPAFALAARGSLPLWLSRQWGGQYGWQEAAALAAEANRPGPVTLRWNQMKGGKEEGKGDMWKSTEAQLENSSXXXXXXXXXXXXXXXXXXXXRLAQEGVQGAEPCRWSPVGVRLSRGRPPHGLWGLAAWREGWFEVQDEGSQLVALATGVGRQGGKGGEHVLDICAGNGGKSLAMGSLMWGGRDXXXXXXXXXXLWVYDTHQSRLKHLEAGARRAGMGGLVRVLESEEALDALLSPETKKGAREEGKEEGRCDVVLVDAPCSSSGVLRRRPSLRWTLKPEDALVTLPAIQRALLTQAQAHVKVGGRLVYATCSLLKEENEEVVAWFLEQYGEGGKEXXXXGRFRALPWQ---GEEEAPLRAAAQAWRDRNGGEGKREELAPGTLQLLPHVHGTDGFYMARFER 814
            DE + P    A R  LP WL+ +   Q+G  EA ALAA  N+  PV LR N +K  + E +                                   RLA+EG    EP  +SPVG+R     P   L+    +++G FEVQDEGSQL+AL     RQ     E ++D CAG GGK+L +G+L+               ++ +DT   RL+ L+   +RAG+   VRV       DA +            + +G+ D VLVDAPCS  G LRR P ++W    E  L  L   Q+ +L  A   VK GGRLVYATCSLL+EENE++V  FL    E          FR +P          PL                  E     L+L PH H TDGFY    ER
Sbjct:  106 DEASLP---FAVRADLPDWLAERLQAQFGAAEALALAAALNQHAPVDLRVNTLKATRAEARA----------------------------------RLAEEGFP-TEPTPYSPVGLRRHDRAP---LFRTECFKDGLFEVQDEGSQLLALMLEPKRQ-----EMIVDFCAGAGGKTLHLGALL----------ANTGTVYAFDTSAPRLEKLKPRLKRAGLHN-VRVAALAHERDARVQ-----------RLKGKIDRVLVDAPCSGVGTLRRNPDIKWR---EINLPELTETQKRILAAAAELVKPGGRLVYATCSLLREENEDIVQDFLATRPE----------FRVVPADEILARRHVPL------------------ETTDTALRLYPHRHRTDGFYAVALER 413          
BLAST of NO21G02060 vs. NCBI_GenBank
Match: WP_013214859.1 (RsmB/NOP family class I SAM-dependent RNA methyltransferase [Hyphomicrobium denitrificans] >ADJ22644.1 Fmu (Sun) domain protein [Hyphomicrobium denitrificans ATCC 51888])

HSP 1 Score: 170.2 bits (430), Expect = 2.600e-38
Identity = 139/403 (34.49%), Postives = 186/403 (46.15%), Query Frame = 0
Query:  420 AARGSLPLWLSRQWGGQYGWQEAAALAAEANRPGPVTLRWNQMKGGKEEGKGDMWKSTEAQLENSSXXXXXXXXXXXXXXXXXXXXRLAQEGVQGAEPCRWSPVGVRLSRGRPPHG------LWGLAAWREGWFEVQDEGSQLVALATGVGRQGGKGGEHVLDICAGNGGKSLAMGSLMWGGRDXXXXXXXXXXLWVYDTHQSRLKHLEAGARRAGMGGLVRVLESEEALDALLSPETKKGAREEGKEEGRCDVVLVDAPCSSSGVLRRRPSLRWTLKPEDALVTLPAIQRALLTQAQAHVKVGGRLVYATCSLLKEENEEVVAWFLEQYGEGGKEXXXXGRFRALPWQGEEEAPLRAAAQAWRDRNGGEGKREELAPG---TLQLLPHVHGTDGFYMARFER 814
            AAR  +P WL   +  Q+G    A   A A R  P  LR N +K  +E       K  +A L                                GA PC  SP+G+R+    PP G      L   AA++ GWFE+QDEGSQ+ AL +G G +     + VLD+CAG GGK+LA+ +LM               L+ YD  +++LK +    +RA +  +  +   +E   A L P              R DVVL DAPC+ +G  RRRP  +W LKPE AL    A QR++L +A + VK GG++VY TCS+L EEN E VA FL+ + +          FR +P            A AW    G  G+    A G   TL L P  HGTDGF++A   R
Sbjct:  120 AARADIPEWLWPSFSAQFGGNAVAEGEAMARR-APADLRVNTLKSTQE-------KVLKALLP------------------------------FGAAPCPVSPIGIRVP---PPSGAQRTPNLQAEAAFQAGWFEIQDEGSQIAALLSGAGPR-----KQVLDLCAGAGGKTLALAALM----------QNTGQLYAYDADRNQLKPIFDRIKRANVRNVQVLRAGDETALAALGP--------------RFDVVLADAPCTGTGTWRRRPDAKWRLKPE-ALAARQAEQRSVLARAASLVKPGGQIVYVTCSILPEENVEQVAAFLDAHRD----------FRIVP-----------TADAWA-AAGLAGEVPVSADGRSDTLLLSPGRHGTDGFFIAVLAR 429          
BLAST of NO21G02060 vs. NCBI_GenBank
Match: WP_086970275.1 (RsmB/NOP family class I SAM-dependent RNA methyltransferase [Caballeronia glebae] >SAK68879.1 NOL1/NOP2/Sun family protein [Caballeronia glebae])

HSP 1 Score: 170.2 bits (430), Expect = 2.600e-38
Identity = 134/398 (33.67%), Postives = 182/398 (45.73%), Query Frame = 0
Query:  416 AFALAARGSLPLWLSRQWGGQYGWQEAAALAAEANRPGPVTLRWNQMKGGKEEGKGDMWKSTEAQLENSSXXXXXXXXXXXXXXXXXXXXRLAQEGVQGAEPCRWSPVGVRLSRGRPPHGLWGLAAWREGWFEVQDEGSQLVALATGVGRQGGKGGEHVLDICAGNGGKSLAMGSLMWGGRDXXXXXXXXXXLWVYDTHQSRLKHLEAGARRAGMGGLVRVLESEEALDALLSPETKKGAREEGKEEGRCDVVLVDAPCSSSGVLRRRPSLRWTLKPEDALVTLPAIQRALLTQAQAHVKVGGRLVYATCSLLKEENEEVVAWFLEQYGEGGKEXXXXGRFRALPWQGEEEAPLRAAAQAWRDRNGGEGKREELAPGTLQLLPHVHGTDGFYMARFER 814
            + A+  R +LP W+      ++  +E A LAA  N P P+ LR N +K  +E                                       LA+ G+   E   ++P GVR+  G+P   L  LA ++EGW EVQDEGSQL+       R     GE ++D CAG GGK+LA+G++M               L+ +D    RL  L+    R+G+  +  VL     +D+    + K+ A       G+ D VLVDAPCS  G LRR P L+W   P       P  Q ++LT A   VK GGRLVYATCS+L+ ENE+VVA FLE +            FR +P +          A+   D + GE          L L PH HGTDGF+ A  ER
Sbjct:  112 SLAVRVRTNLPQWIYDAMAKRFAPEELAQLAAALNYPAPLDLRVNPIKASRE----------------------------------VALKALAEAGIDAGE-MPFAPFGVRVD-GKP--ALTRLAPFQEGWIEVQDEGSQLLCSLVAPRR-----GEMIVDFCAGAGGKTLALGAMM----------RSSGRLYAFDVSDRRLAKLKPRLARSGLSNVNPVL-----IDSEHDAKIKRLA-------GKIDRVLVDAPCSGLGTLRRNPDLKWRQSPASVAELTPK-QLSILTSAARLVKTGGRLVYATCSMLEAENEDVVAQFLETH----------PNFRVVPARD-------VLAEQRIDLDTGE---------YLSLWPHKHGTDGFFAAVLER 417          
The following BLAST results are available for this feature:
BLAST of NO21G02060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Position :
0
Zoom :
x 1
50010001500200025003000Expect = 2.70e-43 / Id = 36.52Expect = 2.50e-41 / Id = 35.41Expect = 3.60e-40 / Id = 41.69Expect = 4.70e-40 / Id = 33.81Expect = 1.00e-39 / Id = 36.20Expect = 5.20e-39 / Id = 34.16Expect = 6.80e-39 / Id = 34.84Expect = 6.80e-39 / Id = 34.40Expect = 2.60e-38 / Id = 34.49Expect = 2.60e-38 / Id = 33.67SequenceXP_003081265.2WP_018911809.1OUS48866.1WP_011984620.1WP_104230390.1WP_045835395.1WP_046847012.1OGI42312.1WP_013214859.1WP_086970275.1
Match NameE-valueIdentityDescription
XP_003081265.22.700e-4336.52RNA (C5-cytosine) methyltransferase [Ostreococcus ... [more]
WP_018911809.12.500e-4135.41RsmB/NOP family class I SAM-dependent RNA methyltr... [more]
OUS48866.13.600e-4041.69S-adenosyl-L-methionine-dependent methyltransferas... [more]
WP_011984620.14.700e-4033.81methyltransferase domain-containing protein [Anaer... [more]
WP_104230390.11.000e-3936.20RsmB/NOP family class I SAM-dependent RNA methyltr... [more]
WP_045835395.15.200e-3934.16RsmB/NOP family class I SAM-dependent RNA methyltr... [more]
WP_046847012.16.800e-3934.84RsmB/NOP family class I SAM-dependent RNA methyltr... [more]
OGI42312.16.800e-3934.40hypothetical protein A2V92_06075 [Candidatus Mupro... [more]
WP_013214859.12.600e-3834.49RsmB/NOP family class I SAM-dependent RNA methyltr... [more]
WP_086970275.12.600e-3833.67RsmB/NOP family class I SAM-dependent RNA methyltr... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR040ncniR040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G02060.1NO21G02060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|546357gene_8174Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G02060.1NO21G02060.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G02060 ID=NO21G02060|Name=NO21G02060|organism=Nannochloropsis oceanica|type=gene|length=3394bp
TAATTTTACATTTTACGAGCCTGTCGTACAAAAAATTTCCCGTGTCCCAT
TTATTTCAACATCCCTTCTCCCGTGTCCTTCTAATTTCAATATCTCCTCT
CTCTCACACTCTTATCCTTCTCCTCTTTTTCTGCCGCTGCTGCTGCCGCT
ACTGGCGGAGATGGGGACGCGGGTCCCACCGGTCTCTGCCCTTCCACGAA
TGGGCCAGTCTGCCTGACCTCGCTGCCTCCAACTGTACCCTCACTCCATT
CTCTTCATGGCGAATTTTACTAATGTCATATTACGCTGCTTCTGATCCTG
TGGCTGGCGCTGCCCTTGTTGATCCTTGTCCCCTTTTTGGGGCACGGCCA
GTCTTTCACATGGAAGGAGAAGGTCGGGTGGGAAAATTAGCTGGAAGGGA
CTTTTGGTATTACGGCTAGCGACAAGTCACTCACCAGTCACAAGCCTTCC
TGCCTGTTCCTGTGAAGGCTGGGGTGGTGCAGCATAGGAAACGATAGGTG
GACATGACATTGGCACCAAATCTCCTCTCTCATCGTCTTTCGAATCTCAT
CGCTCATCACTACGCTACAGCAATACTCGCACTTGACGTGACCTCAACGC
TCACTCCACAATCATTACACACAGGACCCGAATAGATGCCGCGGCCACCA
CCGTTACCACGACCACGACGACCTACAGTACAGGCCGCTTGGCATTGCAC
ACTATGCTCCTTTCTCCCCCCTCTCCTCCTCCTCCTCCTCCAGCCCGTCC
TCTATCAGGCCTACACACCCCACTCCGCCGTCGCCGCCGCCGCCGCCTCC
TCCTCCGCCTCAGCCTCAGCCTCCCCCATCACGCCCAGGAGACTTTCATT
GTCCTCCTCCAGCAGCAGCAGCTCCTCCAAATCCTCTACCCGCCTCGCTC
GTCTCTTACAGCGCCACCAGGGCAGCAGCAGCCGCAGCAGCAGCGGCACC
ACAGCTGGTACCGGTGCCCAACATTCGGCCACGACCCCTGCCGTAGCCCA
AACGCTGCGTGCACTCGCCTCCACACCCCAACAAGAGTGGGATCCGTCCT
CCTCCATCTCCTCCTCCTTCGCTCCTCTGAGAGGCGACGGAGAGAAGGAG
GTGGAGGGGGAGCTTGGGGAAGAGGAAGACGCCATGAGCTCCCTGTCCTT
GGGCCAGCTCGCCTTGCTGGACGAAGTATGCTTGGAGGTGCTCGAAGCTG
TTCTGGCGCCCGATGCTAGGACAGCCGAATGGCTGGTCCGCAAGGCCTTG
CAGAGGGATGGGAGGGAGCTGGGGAACAAGGGGAGGATGATGGTGGCGAG
ACGATGCCTGGGGGTGACGAGTTTGAAGGGCCGGTTGGAGTACATGGTGA
ACACCGCCCTGGTCACGGCGCACAAGAGGCAGGAAGAGGCAGTGGCGGCA
AGGAAAGCGGTGGTGGTAGGCACTGGCAAAATTAACAGCGATTTAAGCAG
CGTCACCACTAGTGGTAGCAGGGAAACCCTCCCTCCTCTCCCACCAGCCC
TGCCCCCCCTGCCCCTCTCCCTCCGGGGACAAGCTCGGCTCCTCCTCTGT
CTATACATCCTCCACTACGAGCATGCCCCCAGTCGAGCCGACGATTTGAA
ACGCGGCCTCATGGGCGGCAACCCCGCCCTCTTCTCCCTCCTCCTCTCCC
TCCCTCCTCCTGCCCCCTCCTTCGCCACCGCCACCACCCTCTCTTCAATG
CTCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCACTACCACCACCAC
CACCTCCTCCTTCTCCCGCTCCTCTTTAACCGTGGATGGCAATACCACGT
CATCTCCTCCACAGCCCTCTCTCCCTCTCTCCCCCAGCGCTTTGGCCACA
TTTGACTGGCCGGACGAAGAGACTCAGCCGGCGTTCGCGCTGGCCGCCAG
GGGGTCTTTGCCCCTCTGGCTGTCCAGACAATGGGGAGGGCAGTACGGTT
GGCAAGAAGCCGCAGCTCTCGCCGCAGAGGCCAACAGGCCAGGACCGGTG
ACCCTGAGGTGGAATCAGATGAAAGGGGGGAAGGAGGAAGGGAAAGGGGA
CATGTGGAAGAGCACGGAGGCGCAGTTGGAAAACTCGTCGAGCAGCAGCA
CCAGCAGCATTACCGTTCCCACCCTCCCTCCGTCCTTCCCTCTCCTGGCC
CGTCTGGCGCAGGAGGGGGTGCAGGGGGCAGAGCCCTGCCGGTGGTCGCC
TGTGGGTGTGCGGTTGAGTAGAGGGAGGCCTCCCCATGGACTGTGGGGGC
TAGCAGCATGGAGGGAGGGATGGTTCGAAGTGCAGGACGAAGGATCGCAG
CTGGTGGCGTTGGCGACGGGGGTGGGGAGGCAGGGAGGGAAGGGAGGGGA
GCATGTGCTGGATATCTGTGCGGGGAATGGAGGAAAGAGCCTGGCAATGG
GGTCGTTGATGTGGGGGGGGAGGGATGGAGGGAGGGAGGGAAAGAGGGAA
GGAAGATTGTGGGTGTATGACACGCACCAGTCGAGATTGAAGCACTTGGA
GGCAGGAGCGAGGCGGGCGGGGATGGGGGGCTTGGTGCGGGTGCTAGAGA
GTGAGGAGGCGCTCGATGCGCTATTGTCTCCGGAAACAAAGAAAGGAGCC
AGGGAGGAAGGGAAGGAGGAAGGGCGGTGTGATGTCGTGTTGGTGGACGC
GCCGTGTTCATCCTCGGGTGTGTTGAGACGCCGCCCTTCCCTGCGGTGGA
CCCTTAAACCCGAGGATGCTCTCGTCACCCTCCCGGCCATCCAGCGTGCC
CTGCTGACGCAAGCGCAAGCTCATGTGAAGGTGGGAGGGAGGTTGGTCTA
TGCGACCTGCTCTCTGCTCAAGGAGGAGAACGAGGAGGTGGTGGCTTGGT
TCTTGGAACAGTACGGAGAGGGAGGGAAGGAGGGAGGGAAGGAAGGGCGC
TTTCGGGCGTTGCCTTGGCAGGGGGAGGAGGAGGCACCCTTGAGAGCGGC
GGCCCAGGCGTGGAGGGATCGAAACGGAGGAGAGGGAAAAAGGGAAGAGT
TGGCGCCGGGGACGTTGCAGTTGTTACCCCACGTGCATGGAACGGATGGG
TTTTATATGGCGAGGTTCGAAAGGTATCGTTGAGGACATGGGATGGATAT
TGCAGAAGTGGCAGCAGTAGCAGTAGCAGGAGGAGGAGGAGGAAGAGAAA
TAAGTGCAGAATGGAAGAAGGACGTGGATTTTTGATAAACTCGTTGGTGT
ACGTGTATTGATAGATGAAGAAAAAAAGGAGGAGGAAAACATAAGTATCG
GGGAGAAAGTACTTTTGAAGATGACGATACAGTGAGGGAGAGACATCATG
TGTATCTGTATCTAGTCGGGAACTAGTCTCAGGTAAGGGTCAAAGCACTA
CCATATAAAGTTAAGGAATAAATATGCACGATAGACGCTGTGCG
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protein sequence of NO21G02060.1

>NO21G02060.1-protein ID=NO21G02060.1-protein|Name=NO21G02060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=816bp
MPRPPPLPRPRRPTVQAAWHCTLCSFLPPLLLLLLQPVLYQAYTPHSAVA
AAAASSSASASASPITPRRLSLSSSSSSSSSKSSTRLARLLQRHQGSSSR
SSSGTTAGTGAQHSATTPAVAQTLRALASTPQQEWDPSSSISSSFAPLRG
DGEKEVEGELGEEEDAMSSLSLGQLALLDEVCLEVLEAVLAPDARTAEWL
VRKALQRDGRELGNKGRMMVARRCLGVTSLKGRLEYMVNTALVTAHKRQE
EAVAARKAVVVGTGKINSDLSSVTTSGSRETLPPLPPALPPLPLSLRGQA
RLLLCLYILHYEHAPSRADDLKRGLMGGNPALFSLLLSLPPPAPSFATAT
TLSSMLPSSSSSSSSSSTTTTTTSSFSRSSLTVDGNTTSSPPQPSLPLSP
SALATFDWPDEETQPAFALAARGSLPLWLSRQWGGQYGWQEAAALAAEAN
RPGPVTLRWNQMKGGKEEGKGDMWKSTEAQLENSSSSSTSSITVPTLPPS
FPLLARLAQEGVQGAEPCRWSPVGVRLSRGRPPHGLWGLAAWREGWFEVQ
DEGSQLVALATGVGRQGGKGGEHVLDICAGNGGKSLAMGSLMWGGRDGGR
EGKREGRLWVYDTHQSRLKHLEAGARRAGMGGLVRVLESEEALDALLSPE
TKKGAREEGKEEGRCDVVLVDAPCSSSGVLRRRPSLRWTLKPEDALVTLP
AIQRALLTQAQAHVKVGGRLVYATCSLLKEENEEVVAWFLEQYGEGGKEG
GKEGRFRALPWQGEEEAPLRAAAQAWRDRNGGEGKREELAPGTLQLLPHV
HGTDGFYMARFERYR*
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Synonyms
Publications