NO21G01990, NO21G01990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO21G01990 vs. NCBI_GenBank
Match: XP_005854338.1 (hypothetical protein NGA_0186400, partial [Nannochloropsis gaditana CCMP526] >EKU22022.1 hypothetical protein NGA_0186400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 340.5 bits (872), Expect = 7.400e-90 Identity = 173/228 (75.88%), Postives = 191/228 (83.77%), Query Frame = 0 Query: 25 VVVGRDRVNIGGVRTCSTSSHGTLELRAYPLQQLPLDDNEGGAEGGRECALLVWDTRGFTPSTYTREELARILRGSYPERNWDPVGRDAGREAEVERAGRRTRRLREQQACVVVLPEGLLQSSVEIEQLRRQLVLVQRAGMNPLVLLTHVDLAYPSLRQDPSGKGVGDLQEAKREAARQLGVELNRVLHMVPYKDEETRRFAIDRLIYKVLSKALQLAAEFVDSHPEG 253 +V R+ VN+GGVRTC+TSSHGTLELRAYPL A+ VWDTRGFTPSTYT EELA IL G YPER WDPVGRDAGREAEV G TR LREQQACVVVLPEG+LQS+VE++QLRRQL LVQRAG+NPLVLLTHVDLAYPSLR DPSG+GVG+L EA+REAARQLGVE NRVLHMVPYKDEETRRF+IDRL+YKVL+KALQLAAE+V+SHPEG Sbjct: 347 LVSEREHVNLGGVRTCATSSHGTLELRAYPLHP-------------TVSAVSVWDTRGFTPSTYTCEELANILAGDYPERRWDPVGRDAGREAEVREEGGATRALREQQACVVVLPEGILQSAVELDQLRRQLELVQRAGLNPLVLLTHVDLAYPSLRADPSGRGVGELGEARREAARQLGVEANRVLHMVPYKDEETRRFSIDRLVYKVLAKALQLAAEYVESHPEG 561
BLAST of NO21G01990 vs. NCBI_GenBank
Match: EWM22693.1 (hypothetical protein Naga_100340g8 [Nannochloropsis gaditana]) HSP 1 Score: 340.5 bits (872), Expect = 7.400e-90 Identity = 173/228 (75.88%), Postives = 191/228 (83.77%), Query Frame = 0 Query: 25 VVVGRDRVNIGGVRTCSTSSHGTLELRAYPLQQLPLDDNEGGAEGGRECALLVWDTRGFTPSTYTREELARILRGSYPERNWDPVGRDAGREAEVERAGRRTRRLREQQACVVVLPEGLLQSSVEIEQLRRQLVLVQRAGMNPLVLLTHVDLAYPSLRQDPSGKGVGDLQEAKREAARQLGVELNRVLHMVPYKDEETRRFAIDRLIYKVLSKALQLAAEFVDSHPEG 253 +V R+ VN+GGVRTC+TSSHGTLELRAYPL A+ VWDTRGFTPSTYT EELA IL G YPER WDPVGRDAGREAEV G TR LREQQACVVVLPEG+LQS+VE++QLRRQL LVQRAG+NPLVLLTHVDLAYPSLR DPSG+GVG+L EA+REAARQLGVE NRVLHMVPYKDEETRRF+IDRL+YKVL+KALQLAAE+V+SHPEG Sbjct: 305 LVSEREHVNLGGVRTCATSSHGTLELRAYPLHP-------------TVSAVSVWDTRGFTPSTYTCEELANILAGDYPERRWDPVGRDAGREAEVREEGGATRALREQQACVVVLPEGILQSAVELDQLRRQLELVQRAGLNPLVLLTHVDLAYPSLRADPSGRGVGELGEARREAARQLGVEANRVLHMVPYKDEETRRFSIDRLVYKVLAKALQLAAEYVESHPEG 519
BLAST of NO21G01990 vs. NCBI_GenBank
Match: XP_004356453.1 (hypothetical protein ACA1_171260 [Acanthamoeba castellanii str. Neff] >ELR24553.1 hypothetical protein ACA1_171260 [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 85.1 bits (209), Expect = 5.600e-13 Identity = 68/220 (30.91%), Postives = 104/220 (47.27%), Query Frame = 0 Query: 28 GRDRVNIGGVRTCSTSSHGTLELRAYPLQQLPLDDNEGGAEGGRECALLVWDTRGFTPSTYTREELARILRGSYPERNWDPVGRDA--GREAEVERAGRRTRRLREQQACVVVLPEGLLQSSVEIEQLRRQLVLVQ-RAGMNPLVLLTHVDLAYPSLRQDPSGKGVGDLQEAKREAARQLGVELNRVLHMVPYKDEETRRFAIDRLIYKVLSKALQLAAE 245 G V GV C + H T +L Y + G AL+ DT G T +TY ++L ++ G +P RNW G D + A+ R TR R + ++ L + E E ++ +Q +A NPLVL++ VD P+ R +P G +++ K++ LG+ NRV +V YKDE R F IDR Y+++ AL+ A+E Sbjct: 145 GMSVVETAGVGGC--ARHNTRQLATYTID-------------GENFALV--DTWGLTLTTYLNDDLENVVDGVFP-RNW---GMDMIYDQHAKAIRDNASTRPERAVHVILFMITHSALDKNDECELIKANYARLQDKAARNPLVLISKVDEIVPAFRSNPLG-DYPEVRALKQKVTDLLGIPENRVYAVVNYKDESERSFQIDRNTYRIVEHALRTASE 342
BLAST of NO21G01990 vs. NCBI_GenBank
Match: XP_005777694.1 (hypothetical protein EMIHUDRAFT_237890 [Emiliania huxleyi CCMP1516] >EOD25265.1 hypothetical protein EMIHUDRAFT_237890 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 74.3 bits (181), Expect = 9.900e-10 Identity = 68/244 (27.87%), Postives = 101/244 (41.39%), Query Frame = 0 Query: 18 KLWFLERVVVGRDRVNIGGVRTCSTSSHG-----TLELRAYPLQQLPLDDNEGGAEGGRECALLVWDTRGFTPSTYTREELARILRGSYPERNW------DPVGRDAGREAEVERAGRRTRRLREQQACVVVLPEGLLQSS--VEIEQLRRQLVLVQRAGMNPLVLLTHVDLAYPSLRQDPSGKGVGDLQEAKREAARQLGVELNRVLHMVPYKDEETRRFAIDRLIYKVLSKALQLAAEFVDS 249 K F ++ N G C+ HG T+ LRA E L VWDT+G TP Y EL I++G P W DP ++ VE R R A V +LP L + ++++R Q + R G+NP+VL+ +D A ++R++PS A + AA LG+ V + Y D ++ F IDR + VL + L +A +S Sbjct: 140 KTSFTNSILALMSHANSGEALPCAEPVHGGGDHCTVTLRAIDFP--------------NELPLRVWDTKGLTPENYKGPELEAIMKGKLP-HGWDMDCHIDPAMLSESQDLTVE----AKRFGRTPHAVVFMLPFSELDDTDGEFMQKIRDQFGKIVRLGINPIVLVAKLDEADDAVRKNPSSSN-STKDAALKAAADFLGIPFGNVYPCINYLDLTSKSFEIDRNLAVVLHRILSMAKHRCES 363
BLAST of NO21G01990 vs. NCBI_GenBank
Match: XP_005766143.1 (hypothetical protein EMIHUDRAFT_246646 [Emiliania huxleyi CCMP1516] >EOD13714.1 hypothetical protein EMIHUDRAFT_246646 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 65.1 bits (157), Expect = 6.000e-7 Identity = 60/217 (27.65%), Postives = 92/217 (42.40%), Query Frame = 0 Query: 42 TSSHGTLELRAYPLQQLPLDDNEGGAEGGRECALLVWDTRGFTPSTYTREELARILRGSYPERNWD--------PVGRDAGREAEVERAGRRTRRLREQQACVVVLPEGLLQSS--VEIEQLRRQLVLVQRAGMNPLVLLTHVDLAYPSLRQDPSGKGVGDLQEAKREAARQLGVELNRVLHMVPYKDEETRRFAIDRLIYKVLSKALQLAAEFVDS 249 + H T+ LR LP L +WDT+G T Y EL I++GS P WD + + EV R G R A V +LP G L + ++++ Q + R G+NP+VL+ +D A +R DP G + AA LG+ + V + Y D ++ F IDR + +L + L +A + +S Sbjct: 168 SDDHCTVSLRCIDADGLP---------------LRMWDTKGLTTENYKGPELEAIMKGSLP-HGWDMDRHIDQTMLSESPDSKVEVIRFG------RTPHAVVFMLPYGELDDTDGEFMQKILDQFSKIVRLGINPIVLVAKLDDADKKVRADPCASN-GTKGAKLKAAAEFLGIPVGNVYPCINYLD-LSKSFEIDRNLAIILHRILSMAKQRCES 360 The following BLAST results are available for this feature:
BLAST of NO21G01990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G01990 ID=NO21G01990|Name=NO21G01990|organism=Nannochloropsis oceanica|type=gene|length=2079bpback to top protein sequence of NO21G01990.1 >NO21G01990.1-protein ID=NO21G01990.1-protein|Name=NO21G01990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=422bpback to top Synonyms
Publications
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