NO21G01890, NO21G01890 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G01890 vs. NCBI_GenBank
Match: XP_005854131.1 (pap fibrillin family protein [Nannochloropsis gaditana CCMP526] >EKU22229.1 pap fibrillin family protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 403.3 bits (1035), Expect = 7.000e-109 Identity = 207/263 (78.71%), Postives = 233/263 (88.59%), Query Frame = 0 Query: 52 SSPAF---LLAAASDQPDWPSDSSDDNYADEVEQVT---DVVDATASKTTLMELQQELLLLLVGQNKGFSVSESDREDIEDTLRDLEAINPNPRPTESFSHGTSPLSGTWRLIYTDALDVLVLGLVPIAVIGKVYQNISPNGASIANVVELSQGASQLSFFPLLGKFGDSMARLRVEASSEVLSPSRLSLTFKSAGFEPITLFGMEVGKQLSLPKLDFPNSPNVGWIESTYVDDKIRIGRSPGGIGGKGSVFVFVREGGAGRW 309 S+P F L AAASD DWPSDSSDD+Y D + + DVVDATA TT ELQ +LLLLLVGQNKGFSVSES+REDI+DTLRDLEA+NP PRPTE+FS GTSPLSGTWRL+YTDALDVLVLGLVP+AVIGKV+QNISP+G SIANVVE+SQGASQLSFFPLLGK GDS ARLRVEA+SE+LSP+RLSLTF+SAGFEP+TLFGMEV +QL +PK+DF SPNVGWIE+TYVD+KIRIGRSPGG+GG+GSVFVFVREGGAG W Sbjct: 50 SAPVFTPPLFAAASDSSDWPSDSSDDDYTDRGDASSSGPDVVDATARATTRKELQHDLLLLLVGQNKGFSVSESEREDIDDTLRDLEAVNPTPRPTEAFSQGTSPLSGTWRLVYTDALDVLVLGLVPLAVIGKVFQNISPDGKSIANVVEVSQGASQLSFFPLLGKLGDSTARLRVEATSEILSPTRLSLTFQSAGFEPVTLFGMEVEQQLRVPKVDFWRSPNVGWIETTYVDEKIRIGRSPGGLGGQGSVFVFVREGGAGMW 312
BLAST of NO21G01890 vs. NCBI_GenBank
Match: EWM22687.1 (pap fibrillin family protein [Nannochloropsis gaditana]) HSP 1 Score: 367.9 bits (943), Expect = 3.200e-98 Identity = 190/243 (78.19%), Postives = 214/243 (88.07%), Query Frame = 0 Query: 52 SSPAF---LLAAASDQPDWPSDSSDDNYADEVEQVT---DVVDATASKTTLMELQQELLLLLVGQNKGFSVSESDREDIEDTLRDLEAINPNPRPTESFSHGTSPLSGTWRLIYTDALDVLVLGLVPIAVIGKVYQNISPNGASIANVVELSQGASQLSFFPLLGKFGDSMARLRVEASSEVLSPSRLSLTFKSAGFEPITLFGMEVGKQLSLPKLDFPNSPNVGWIESTYVDDKIRIGRSPG 289 S+P F L AAASD DWPSDSSDD+Y D + + DVVDATA TT ELQ +LLLLLVGQNKGFSVSES+REDI+DTLRDLEA+NP PRPTE+FS GTSPLSGTWRL+YTDALDVLVLGLVP+AVIGKV+QNISP+G SIANVVE+SQGASQLSFFPLLGK GDS ARLRVEA+SE+LSP+RLSLTF+SAGFEP+TLFGMEV +QL +PK+DF SPNVGWIE+TYVD+KIRIGRSPG Sbjct: 50 SAPVFTPPLFAAASDSSDWPSDSSDDDYTDRGDASSSGPDVVDATARATTRKELQHDLLLLLVGQNKGFSVSESEREDIDDTLRDLEAVNPTPRPTEAFSQGTSPLSGTWRLVYTDALDVLVLGLVPLAVIGKVFQNISPDGKSIANVVEVSQGASQLSFFPLLGKLGDSTARLRVEATSEILSPTRLSLTFQSAGFEPVTLFGMEVEQQLRVPKVDFWRSPNVGWIETTYVDEKIRIGRSPG 292
BLAST of NO21G01890 vs. NCBI_GenBank
Match: CBJ29036.1 (PAP fibrillin [Ectocarpus siliculosus]) HSP 1 Score: 159.8 bits (403), Expect = 1.300e-35 Identity = 87/218 (39.91%), Postives = 136/218 (62.39%), Query Frame = 0 Query: 87 VDATASKTTLMELQQELLLLLVGQNKGFSVSESDREDIEDTLRDLEAINPNPRPTESFSHGTSPLSGTWRLIYTDALDVLVLGLVPIAVIGKVYQNISPNGASIANVVELSQGASQLSFFPLLGKF-GDSMARLRVEASSEVLSPSRLSLTFKSAGFEPITLFGMEVGKQLSLPKLDFPNSP--NVGWIESTYVDDKIRIGRSPGGIGGKGSVFVFVR 302 V++T++ + +L+ LL G N+G S E D+E+I + + +LE NPNP P + FS G S L+G W+LI+T ALDVL LGL+P +G+++QNI+ +G I NVV+L A+ P+L +F G + ARL V A++ + RL+L+F+ + + P TL G +V L K+ FP P N GWI++T++D++IR+ R+ G G++FV R Sbjct: 71 VESTSTDEPVEDLKARLLRASAGVNRGLSCREGDQEEILEIVEELERQNPNPTPNDGFSEGASILTGEWKLIFTSALDVLSLGLIPGVEVGQIFQNINEDGTEITNVVDLQPKAA-----PVLERFAGSTSARLEVLAAASLEGDKRLTLSFRRSQYSPQTLLGRDVSATLPPFKVSFPEIPGTNAGWIDTTFIDEEIRVARAFG-----GNLFVLAR 278
BLAST of NO21G01890 vs. NCBI_GenBank
Match: CEM35772.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 146.7 bits (369), Expect = 1.200e-31 Identity = 103/286 (36.01%), Postives = 157/286 (54.90%), Query Frame = 0 Query: 13 FVLILAAAHAFLLSPSKPASLRARPSASVSLHHR-----TVARTSSPAFLLAAASDQPDWPSDSSDDNYADEVEQVTDVVDATASKTTLMELQQELLLLLVGQNKGFSVSESDREDIEDTLRDLEAINPNPRPTESFSHGTSPLSGTWRLIYTDALDVLVLGLVPIAVIGKVYQNISPNGA--SIANVVELSQGASQLSFFPLLGKF-GDSMARLRVEASSEVLSPSRLSLTFKSAGFEPITLFGMEVGKQLSLPKLDFPNSPNVGW--IESTYVDDKIRIGRSPG 289 FV +L + PS+ A + V L+ + + A T +P+ + D+ D PSD++ D + + + +K L+++L L+ G N+GF+ D DI + L LE++NPNP+P G+SPL+G WRL++T+ALDVL+LGL+P +G+VYQN++ +G + NVVEL Q F + +F G ++ARLRV AS+EV S S+L LTF+S FEP T G V + PK++ G +E+TYVD+ +RI R G Sbjct: 23 FVQLLRTHSHWRTGPSRVADYNSHARRLVPLYAQKESTGSAATTVTPSSADPSEGDETDAPSDTAMDTPSPSARPLEILPTMDRAK-----LKKDLYLMCPGVNRGFNAKRPDSADILEVLELLESVNPNPQP-NLMKDGSSPLNGEWRLLFTNALDVLLLGLIPAVQVGQVYQNVNLDGVVNAAENVVEL-----QPQFDSVANRFLGSTVARLRVRASAEVESDSKLYLTFQSVAFEPDTFLGQLVPRNWPWPKVNLNREGRRGGGPVETTYVDEDLRIARGFG 297
BLAST of NO21G01890 vs. NCBI_GenBank
Match: CBN80185.1 (plastid lipid associated protein [Ectocarpus siliculosus]) HSP 1 Score: 110.5 bits (275), Expect = 9.300e-21 Identity = 63/158 (39.87%), Postives = 92/158 (58.23%), Query Frame = 0 Query: 111 NKGFSVSESDREDIEDTLRDLEAINPNPRPTESFSHGTSPLSGTWRLIYTDALDVLVLGLVPIAVIGKVYQNISPNGASIANVVELSQGASQLSFFPLLGKFGDSMARLRVEASSEVLSPSRLSLTFKSAGFEPITLFGMEVGKQLSLPKL--DFPNS 267 N+GF E DR D+E+ + LE NPNP+ E F G+SPL+G W+L+YT +LDVL L + P +GK++Q I +G SI N++EL Q F + G SM L V+ +E +S SR++L F + +LF G++L LP L D P++ Sbjct: 159 NRGFVAEELDRLDVEEIIEMLEMENPNPKSCEGFETGSSPLAGRWQLLYTTSLDVLSLQINPAVTVGKIFQQIESDGRSIQNIIEL-----QPPFAAVNKILGSSMTTLTVKLETEPVSDSRINLKFVRTEIKANSLF----GRELDLPTLGVDIPSA 307
BLAST of NO21G01890 vs. NCBI_GenBank
Match: XP_005713282.1 (unnamed protein product [Chondrus crispus] >CDF33479.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 104.4 bits (259), Expect = 6.700e-19 Identity = 72/234 (30.77%), Postives = 118/234 (50.43%), Query Frame = 0 Query: 78 DEVEQVTDVVDATASKTTLMELQQELLLLLVGQNKGFSVSESDREDIEDTLRDLEAINPNPRPTESFSHGTSPLSGTWRLIYTDALDVLVLGLV-PIAVIGKVYQNI--------SPNGASIANVVELSQGASQLSFFPLLGKFGDSMARLRVEASSEVLSPSRLSLTFKSAGFEPITLFGMEVGKQLSLPKLDFPNSPNVGWIESTYVDDKIRIGRSPGGIGGKGSVFVFVRE 303 + V+ VDA + +L+ L + N+G + S DR +I + +LE P P + L G WRL++T+ALDVL LGL+ P+A +G+++QNI I NVV+L + +S +LG G S+ + V A S SR+ +TF + +FGM++ + +P F VG+IE+T++D+ IR+ R+P +G +F+ +RE Sbjct: 67 EAVDVPASAVDAQTRAVPISDLKCSLYAAVSSTNRGLTASADDRANILSLVAELERAKPPTAPADD----PGMLCGRWRLLFTNALDVLSLGLLAPVAQVGQIFQNIYEVPLEGKGDYDYDIENVVQLEPAFAPVS--NVLG--GQSITSITVSAEGRKTSDSRVDITFVQNAIKQEKIFGMQLPNE--IPAAKFAIGSPVGYIETTFLDEDIRVARAPPVRSQEGGLFLLIRE 290
BLAST of NO21G01890 vs. NCBI_GenBank
Match: WP_017315378.1 (fibrillin [Mastigocladopsis repens]) HSP 1 Score: 102.4 bits (254), Expect = 2.500e-18 Identity = 69/202 (34.16%), Postives = 103/202 (50.99%), Query Frame = 0 Query: 103 LLLLLVGQNKGFSVSESDREDIEDTLRDLEAINPNPRPTESFSHGTSPLSGTWRLIYTDALDVLVLGLVPIAVIGKVYQNISPNGASIANVVELSQGASQLSFFPLLGKFGD-SMARLRVEASSEVLSPSRLSLTFKSAGFEPITLFGMEVGKQLSLPKLDFPNSPN--VGWIESTYVDDKIRIGRSPGGIGGKGSVFVFVR 302 LL + G+N+G +E DR+ I + +LE INP PRP ES T L+G WRLIYT + +L L +P +G++YQ I S+ N+ E+ + KF S R+ V+ ++S RL G++ F ++ L +DFP + N GW++ TY+DD +RIGR G +GSVFV + Sbjct: 7 LLEAIAGKNRGLLATEQDRQGILVAIANLEDINPTPRPIES----THLLNGNWRLIYTTSKALLNLDNLPFYKLGQIYQYIRVENNSVYNIAEIYGLPFVEGIVSVAAKFEPVSGRRVNVKFERSIISLQRL------IGYDSPESFIQQIEVGQKLTAIDFPLNSNEQQGWLDITYIDDNLRIGR-----GNEGSVFVLTK 193
BLAST of NO21G01890 vs. NCBI_GenBank
Match: WP_069350090.1 (fibrillin [Scytonema millei] >ODN57511.1 fibrillin [Scytonema millei VB511283]) HSP 1 Score: 98.2 bits (243), Expect = 4.800e-17 Identity = 68/202 (33.66%), Postives = 105/202 (51.98%), Query Frame = 0 Query: 103 LLLLLVGQNKGFSVSESDREDIEDTLRDLEAINPNPRPTESFSHGTSPLSGTWRLIYTDALDVLVLGLVPIAVIGKVYQNISPNGASIANVVELSQGASQLSFFPLLGKFGD-SMARLRVEASSEVLSPSRLSLTFKSAGFEPITLFGMEVGKQLSLPKLDFPNSPN--VGWIESTYVDDKIRIGRSPGGIGGKGSVFVFVR 302 LL + G+N+G +E DR+ I + +LE +NP PRP E+ T+ L+G WRLIYT + +L L P+ +G++YQ I S+ N+ E+ + KF S R+ V+ ++ RL F + +EVGK+ + +DFP + N GW++ TY+DD +RIGR G +GSVFV + Sbjct: 7 LLEAIAGKNRGLLATEQDRQAILVAIANLEDLNPTPRPVEA----TNLLNGNWRLIYTTSKALLNLDKFPLYKLGQIYQCIRVETNSVYNIAEIYGLPFVEGIISVAAKFEPVSGRRVNVKFERSIIGLQRLIGYSSPESF----IQQIEVGKKFT--AIDFPLNSNQQQGWLDITYIDDNLRIGR-----GNEGSVFVLTK 193
BLAST of NO21G01890 vs. NCBI_GenBank
Match: WP_002788271.1 (fibrillin [Microcystis aeruginosa] >CCI18319.1 Fibrillin [Microcystis aeruginosa PCC 9807] >AKV65773.1 fibrillin [Microcystis panniformis FACHB-1757]) HSP 1 Score: 98.2 bits (243), Expect = 4.800e-17 Identity = 66/208 (31.73%), Postives = 107/208 (51.44%), Query Frame = 0 Query: 97 MELQQELLLLLVGQNKGFSVSESDREDIEDTLRDLEAINPNPRPTESFSHGTSPLSGTWRLIYTDALDVLVLGLVPIAVIGKVYQNISPNGASIANVVELSQGASQLSFFPLLGKFGD--SMARLRVEASSEVLSPSRLSLTFKSAGFEPITLFGMEVGKQLSLPKLDFPNSPNVGWIESTYVDDKIRIGRSPGGIGGKGSVFVFVRE 303 M+ + +LL L+ G+N+G +ESDR I + LE NP+P P E L G WRL++T + ++L + +P +G++YQ + N A + N+ E+ G L ++ + S R+ V+ +L RL L + SA + +E G++ F N P GW++ TY+D+ +RIGR G +GSVF+ RE Sbjct: 1 MDAKAKLLELIAGRNRGLLATESDRVRILAAIEQLEDHNPHPHPLEV----KQLLGGNWRLLFTSSRNILGIDRLPFFQLGQIYQYLDLNKAKLYNIAEII-GVPWLEGVVIVSATFEPTSERRIMVKFERSILGLQRL-LNYHSA---QEFIDAIESGQKFPPLDFSFNNRPQTGWLDITYLDEDLRIGR-----GSEGSVFILARE 194
BLAST of NO21G01890 vs. NCBI_GenBank
Match: PNW34037.1 (fibrillin [Euhalothece sp. KZN 001]) HSP 1 Score: 98.2 bits (243), Expect = 4.800e-17 Identity = 68/206 (33.01%), Postives = 100/206 (48.54%), Query Frame = 0 Query: 97 MELQQELLLLLVGQNKGFSVSESDREDIEDTLRDLEAINPNPRPTESFSHGTSPLSGTWRLIYTDALDVLVLGLVPIAVIGKVYQNISPNGASIANVVELSQGASQLSFFPLLGKFGD-SMARLRVEASSEVLSPSRLSLTFKSAGFEPITLFGMEVGKQLSLPKLDFP---NSPNVGWIESTYVDDKIRIGRSPGGIGGKGSVFV 299 M + +LL L G+N+G SE D+ +I + +LEA NP P P E T L G WRL+YT + D+L PI G++YQ I P + + N+ E+ ++ +F S R+ V ++ +L G++ + EV K P LDFP NS W+E TY+D+ +RI R G +GSVFV Sbjct: 1 MSKKTQLLNQLAGKNRGLLASEGDKVNILSAIAELEAENPTPNPIEL----TELLGGNWRLLYTTSKDLLSFDRFPILQTGQIYQCIIPEKSKVYNLAEVVGIPFLEGIVSVVAEFTPVSEKRVNVNFKRSIVGLQKL------LGYKSPDAYIEEVEKGKKFPPLDFPIERNSDQKAWLEITYLDEDLRISR-----GNRGSVFV 191 The following BLAST results are available for this feature:
BLAST of NO21G01890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G01890 ID=NO21G01890|Name=NO21G01890|organism=Nannochloropsis oceanica|type=gene|length=2362bpback to top protein sequence of NO21G01890.1 >NO21G01890.1-protein ID=NO21G01890.1-protein|Name=NO21G01890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=315bpback to top protein sequence of NO21G01890.2 >NO21G01890.2-protein ID=NO21G01890.2-protein|Name=NO21G01890.2|organism=Nannochloropsis oceanica|type=polypeptide|length=219bpback to top Synonyms
Publications
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