NO21G01840, NO21G01840 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G01840 vs. NCBI_GenBank
Match: XP_005853754.1 (hypothetical protein NGA_0476201 [Nannochloropsis gaditana CCMP526] >EKU22606.1 hypothetical protein NGA_0476201 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 343.2 bits (879), Expect = 3.400e-90 Identity = 175/264 (66.29%), Postives = 200/264 (75.76%), Query Frame = 0
Query: 158 KTKDLFTSTLLAGGLQSVQQEQQAGAPSASKGVCFASDMPELLEALDDDSGCSIINLVILA--DESNGENGN------DTPFIFENEVLVSSRVVIQGNSVVLPLLDCSSSIRCFRVLTGGYLELRYVRINQSNVGVLRPVRPLLEGITPTGMVKEYRGSSVYFEPDATGGRFLGVIFDDDQSDEFEQILEESLALTSNRIYGGFIFMAGGRLEFELCLFWDFEYMTPLDRIYVGGDVLVLAGEVSFIGCVWIYTTFFGLENGA 414
+TKD +S LA QQ GA CF DM EL EAL DDS C++I LV + D +G+ + TPF+F +E+LVS RV+IQGNSV+LP LDCS SIRCFRV+ GGYLELRYVRINQS+ GVLRPV PL EG T TGMV+EYRGSSVYFEP ATGGRFLGV FDDDQSDE + I+E+S ALTS RIYGGF+FMAGGRL+FELCLF+DFE++TPLDRIY+GGDVLVLAGEVSF GCVW Y TF G ENGA
Sbjct: 148 QTKDFLSSAPLA--------NQQKGAAVTPDAACFVGDMEELAEALADDSECTVITLVSTSSRDGVSGDGNSIPSAAAQTPFVFRDEILVSKRVIIQGNSVLLPFLDCSQSIRCFRVMDGGYLELRYVRINQSDKGVLRPVNPLYEGFTVTGMVREYRGSSVYFEPGATGGRFLGVYFDDDQSDETDWIVEQSFALTSFRIYGGFVFMAGGRLQFELCLFYDFEFVTPLDRIYLGGDVLVLAGEVSFTGCVWAYITFLGFENGA 403
BLAST of NO21G01840 vs. NCBI_GenBank
Match: EWM23493.1 (hypothetical protein Naga_100198g12 [Nannochloropsis gaditana]) HSP 1 Score: 128.6 bits (322), Expect = 1.300e-25 Identity = 82/227 (36.12%), Postives = 120/227 (52.86%), Query Frame = 0
Query: 191 CFASDMPELLEALDDDSGCSIINLVILADESNGENGNDTPFIFENEVLVSSRVVIQGNSVVLPLLDCSSSIRCFRVLTGGYLELRYVRINQSNVGVLRPVRP--LLEGITPTGMVKEYRGSSVYFEPDATGGRFLGVIF--DDDQSDEFEQILEESLALTSNRIYGGFIFMAGGRLEFELCLFWDFEYMTPLDRI-YVGGDVLVLAGEVSFIGCVWIYTTFFGLENG 413
C +D EL +A+++ S CSI+ L G+ + E E+LV V++ GN VLP++D +IR F VL GG+L+LR+V+ S+ G++R +P + +P V E RG SV+ + A GG+F GVIF D D D + + S+ RIYGG +F+ GGR++F CLFWD + + Y+G DVL T FG+ENG
Sbjct: 155 CEVNDGLELTDAIENQS-CSIVYL------KPGQ-----LYELEREILVRREVIVMGNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASD-GIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFTGVIFIDDPDVEDAARRSIRRSIDGDVYRIYGGHVFIVGGRVDFVGCLFWDLTLIYTFGNVLYIGQDVLQXXXXXXXXXXXXXENTVFGIENG 368
BLAST of NO21G01840 vs. NCBI_GenBank
Match: XP_005852539.1 (hypothetical protein NGA_0727200 [Nannochloropsis gaditana CCMP526] >EKU23293.1 hypothetical protein NGA_0727200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 126.3 bits (316), Expect = 6.500e-25 Identity = 85/274 (31.02%), Postives = 126/274 (45.99%), Query Frame = 0
Query: 185 SASKGVCFASDMPELLEALDDDSGCSIINLVILADESNGENGNDTPFIFENEVLVSSRVVIQGNSVVLPLLDCSSSIRCFRVLTGGYLELRYVRINQSNVGVLRP---------------------------------------VRPLLEG----ITPTGMVKEYRGSSVYFEPDATGGRFLGVIFDDDQSD--EFEQILEESLALTSNRIYGGFIFMAGGRLEFELCLFWDFEYMTPL-DRIYVGGDVLVLAGEVSFIGCVWIYTTFFGLENG 413
S ++ C ++ EL +A++ + C+++ L + ++ E E+++S VV+ GNSV+LP +DC +R FRV+ GG+L+L++VRIN G +RP VR L G G V + RG SVYFEP A GG F G+ F DQ+D + +E++ L RI+GG + +A G + F C+F+D E +TPL DRIY W Y T G ENG
Sbjct: 146 SGNQDACRVANAGELEDAIERKT-CAVVILT---------SSEPDAYVLEREIVISRAVVVMGNSVMLPFIDCKDIVRAFRVVPGGFLDLQFVRINIGK-GFVRPRWGLFRKQKTRRNLRGEEIILDEEEDDWREPRTKEEREMVRNLQLGGQAADAEPGEVIDIRGGSVYFEPGALGGTFNGIYFTSDQTDVEDIMVAIEQTTNLIGIRIWGGHVLVADGDVSFNACVFYDLELLTPLSDRIYXXXXXXXXXXXXXXXXXHWFYFTVIGAENG 408
BLAST of NO21G01840 vs. NCBI_GenBank
Match: XP_005854372.1 (hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526] >EKU21987.1 hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 115.2 bits (287), Expect = 1.500e-21 Identity = 83/269 (30.86%), Postives = 133/269 (49.44%), Query Frame = 0
Query: 167 LLAGGLQSVQQEQQAGAPSASKGVCFASDMPELLEALDDDSGCSIINLVILADESNGENGNDTPFIFENEVLVSSRVVIQGNSVVLPLLDCSS---SIRCFRVLTGGYLELRYVRINQSNVGVLRPVRPLLEGITP----------------TGMVKEYRGSSVYFEPDATGGRFLGVIFDD--DQSDEFEQILEESLALTSNRIYGGFIFMAGGRLEFELCLFWDFEYMTPL-DRIYVGGDVLVLAGEVSFIGCVWIYTTFFGLENGA 414
+L+ G +QQA S C+ EL+EA+ + CS++ L N + ++ ++V + I G+ V LP++D S+ + R FRV+ GG+L+L+Y+R+ ++ VG + RP+ T TG + E RG SV E A+G F GVIF + + ++ ++ + R YGG IF+AGG ++F C FW + PL D+ +GGD+L+LAG ++ C + TT FG GA
Sbjct: 117 VLSKGSDRFSSKQQAS--SDQMDACYPQTADELVEAV-QELDCSLLFLT---------NFDPQAYLITQHIMVDRPIRIVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRV-RAGVGETKE-RPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLPLTDQFSLGGDILMLAGTLTVTACTFTSTTMFGSLAGA 371
BLAST of NO21G01840 vs. NCBI_GenBank
Match: EWM26075.1 (hypothetical protein Naga_100278g5 [Nannochloropsis gaditana]) HSP 1 Score: 114.8 bits (286), Expect = 2.000e-21 Identity = 77/245 (31.43%), Postives = 124/245 (50.61%), Query Frame = 0
Query: 191 CFASDMPELLEALDDDSGCSIINLVILADESNGENGNDTPFIFENEVLVSSRVVIQGNSVVLPLLDCSS---SIRCFRVLTGGYLELRYVRINQSNVGVLRPVRPLLEGITP----------------TGMVKEYRGSSVYFEPDATGGRFLGVIFDD--DQSDEFEQILEESLALTSNRIYGGFIFMAGGRLEFELCLFWDFEYMTPL-DRIYVGGDVLVLAGEVSFIGCVWIYTTFFGLENGA 414
C+ EL+EA+ + CS++ L N + ++ ++V + I G+ V LP++D S+ + R FRV+ GG+L+L+Y+R+ ++ VG + RP+ T TG + E RG SV E A+G F GVIF + + ++ ++ + R YGG IF+AGG ++F C FW + PL D+ +GGD+L+LAG ++ C + TT FG GA
Sbjct: 4 CYPQTADELVEAV-QELDCSLLFLT---------NSDPQAYLITQHIMVDRPIRIVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRV-RAGVGETKE-RPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLPLTDQFSLGGDILMLAGTLTVTACTFTSTTMFGSLAGA 236
BLAST of NO21G01840 vs. NCBI_GenBank
Match: XP_005854242.1 (hypothetical protein NGA_0025320 [Nannochloropsis gaditana CCMP526] >EKU22122.1 hypothetical protein NGA_0025320 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 114.4 bits (285), Expect = 2.600e-21 Identity = 66/171 (38.60%), Postives = 93/171 (54.39%), Query Frame = 0
Query: 247 GNSVVLPLLDCSSSIRCFRVLTGGYLELRYVRINQSNVGVLRPVRP--LLEGITPTGMVKEYRGSSVYFEPDATGGRFLGVIF--DDDQSDEFEQILEESLALTSNRIYGGFIFMAGGRLEFELCLFWDFEYMTPLDRI-YVGGDVLVLAGEVSFIGCVWIYTTFFGLENG 413
GN VLP++D +IR F VL GG+L+LR+V+ S+ G++R +P + +P V E RG SV+ + A GG+F GVIF D D D + + S+ RIYGG +F+ GGR++F CLFWD + + Y+G DVL T FG+ENG
Sbjct: 84 GNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASD-GIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFTGVIFIDDPDVEDAARRSIRRSIDGDVYRIYGGHVFIVGGRVDFVGCLFWDLTLIYTFGNVLYIGQDVLQXXXXXXXXXXXXXENTVFGIENG 253
BLAST of NO21G01840 vs. NCBI_GenBank
Match: EWM26475.1 (hypothetical protein Naga_100045g21 [Nannochloropsis gaditana]) HSP 1 Score: 114.4 bits (285), Expect = 2.600e-21 Identity = 74/223 (33.18%), Postives = 120/223 (53.81%), Query Frame = 0
Query: 188 KGVCFASDMPELLEALDDDSGCSIINLVILADESNGENGNDTPFIF--ENEVLVSSRVVIQGNSVVLPLLDCSSSIRCFRVLTGGYLELRYVRINQSNVGVLRPVRPLLEGITP-TGMVKEYRGSSVYFEPDATGGRFLGVIFDDDQSDE--FEQILEESLALTSNRIYGGFIFMAGGRLEFELCLFWDFEYMTPL-DRIYVGGDVLVLAGEVSFIGCVWIYT 405
K C+ ++ EL A+ +++ C ++ L N N ++ NE++V V + G+ +LP +D +R F ++ GG+LEL+YVR+ Q +G+ R R LEG + V E +G SV E A G F+GVIF +++ EQ +++ + +T RIYGG +++ G + F C FWD + P D++ +G D+LVLAG V GC + T
Sbjct: 201 KDTCWPRNIVELQIAV-EEADCPLVVLT---------NPNPMAYMLMDMNEIMVMRHVRVLGHPALLPTIDAMMGMRAFTIMEGGFLELQYVRVRQ-GMGMYRD-RYGLEGRDDISSKVFEIKGGSVMLEEGAEGANFVGVIFLAVMTNQEMTEQAIQDQIDMTGWRIYGGHVYVTAGTVRFFNCHFWDSMILMPFTDQVAIGADILVLAGNVFVTGCTFTNT 411
BLAST of NO21G01840 vs. NCBI_GenBank
Match: EWM20865.1 (hypothetical protein Naga_101248g2 [Nannochloropsis gaditana]) HSP 1 Score: 113.6 bits (283), Expect = 4.400e-21 Identity = 76/177 (42.94%), Postives = 103/177 (58.19%), Query Frame = 0
Query: 1080 GWMKGGKEGGRRITA--WAEEENGEEGREDEVLFSISLRDPSLPALPLTHLTYDHPYSLHLRGFSPSDSVKLQLLLSGCGRGREEV---GEVRVLGEVLMDARGHGGEKRQTVIFVEDKEGEGREEEG-EGVIVMQVPAGDVSFALQAVDILTGGVGFSASMVVSREGRKRRLYGPL 1251
GW GG+ G RR+ + LFS+ L DPSLP LPLT + + PY+L+LRG SPS V+LQLLL G + E++ GEVR LG V MD G+G E + +IF+ + E + EG G IV+ +P +FALQAVD +TG VGFS ++++ G RR YG +
Sbjct: 2 GWTLGGR-GRRRVRSKHXXXXXXXXXXXXXXXLFSLLLEDPSLPGLPLTEVAVNRPYALYLRGMSPSGVVRLQLLLRGRDQEGEQIGRQGEVRRLGSVKMDGWGNGREDGEEIIFIREGEQPREKIEGNNGRIVVVLPDFGEAFALQAVDTVTGTVGFS-PLLMATSGGTRRSYGTM 176
BLAST of NO21G01840 vs. NCBI_GenBank
Match: XP_005853964.1 (hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526] >EKU22398.1 hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 103.6 bits (257), Expect = 4.500e-18 Identity = 63/189 (33.33%), Postives = 98/189 (51.85%), Query Frame = 0
Query: 191 CFASDMPELLEALDDDSGCSIINLVILADESNGENGNDTPFIFENEVLVSSRVVIQGNSVVLPLLDCSSSIRCFRVLTGGYLELRYVRINQSNVGVLRPVRPLLEGITPTGMVKEYRGSSVYFEPDATGGRFLGVIF--DDDQSDEFEQILEESLALTSNRIYGGFIFMAGGRLEFELCLFWDFEYMTP 378
C+ +D ELL+A+ ++ GC ++ L +G+ + + ++ V+ V + GN VLP +D + R F V GG LEL++VR+ Q G +R R LEG + +V E RG V EP A G F+GV F + D + +E+ + RIYGG +++A G + F C FWD + P
Sbjct: 115 CWPADGAELLDAV-ENQGCELVVL---------SSGDPDAYALDEDIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQGG-GTVRD-RYGLEGSGSSSVVGEVRGGCVSVEPGALGANFVGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNFWDTTLLLP 291
BLAST of NO21G01840 vs. NCBI_GenBank
Match: EWM24109.1 (hypothetical protein Naga_100286g5 [Nannochloropsis gaditana]) HSP 1 Score: 103.6 bits (257), Expect = 4.500e-18 Identity = 63/189 (33.33%), Postives = 98/189 (51.85%), Query Frame = 0
Query: 191 CFASDMPELLEALDDDSGCSIINLVILADESNGENGNDTPFIFENEVLVSSRVVIQGNSVVLPLLDCSSSIRCFRVLTGGYLELRYVRINQSNVGVLRPVRPLLEGITPTGMVKEYRGSSVYFEPDATGGRFLGVIF--DDDQSDEFEQILEESLALTSNRIYGGFIFMAGGRLEFELCLFWDFEYMTP 378
C+ +D ELL+A+ ++ GC ++ L +G+ + + ++ V+ V + GN VLP +D + R F V GG LEL++VR+ Q G +R R LEG + +V E RG V EP A G F+GV F + D + +E+ + RIYGG +++A G + F C FWD + P
Sbjct: 134 CWPADGAELLDAV-ENQGCELVVL---------SSGDPDAYALDEDIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQGG-GTVRD-RYGLEGSGSSSVVGEVRGGCVSVEPGALGANFVGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNFWDTTLLLP 310 The following BLAST results are available for this feature:
BLAST of NO21G01840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 12
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G01840 ID=NO21G01840|Name=NO21G01840|organism=Nannochloropsis oceanica|type=gene|length=4799bpback to top protein sequence of NO21G01840.1 >NO21G01840.1-protein ID=NO21G01840.1-protein|Name=NO21G01840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1254bpback to top Synonyms
Publications
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