NO21G01710, NO21G01710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G01710 vs. NCBI_GenBank
Match: EWM22655.1 (Ovarian tumor, otubain [Nannochloropsis gaditana]) HSP 1 Score: 1102.0 bits (2849), Expect = 0.000e+0 Identity = 647/1232 (52.52%), Postives = 766/1232 (62.18%), Query Frame = 0 Query: 1 MTLSYSDLVLGLCVNADTYDDGECGGSAVNNRCHG-SGGADQPPCPRETADAAVATTAVATTQWESQPRLPD-----DAETQPGEDGLDSGGEQHQQPFPAEALGRFDFRVKPTNFAPGFKTVRSTVLMDWDEIKLWYQGQTLLKEIERREYVVKGLRWTPFEPRPPAGEPVVRHPTEPLDEEEGQSLRVLRDYGANLRPVWVDGDGSCLVHAVSTALTGSQLYYDALRWAAHKELRDHATFYQQAGFVTEQDKARFLPRLEAAAXXXXXXXXXXXXXXXXXXXXQMRDFDNSRTGRPKWTPAFLEEAVEKARPSEGEMRGPAQYLEEIHVAALANALRRPIMILAEGFQGGLFLPLRHDPEDCRLPASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFVFLQYDHYIPLVHQDPRDFWDWAKGPDSGFAGDDAALEALRLYEAERGSINHRIPEFAEEILTMCVGVAAQKMEEVLSTYEVPPADREAYRQAFGRPECMEALPLKVVFEDQISIARCDKTVKNLKTMNALFRALGMEVSGEAEATSQNNVVYLSLHVHQVDFARYHRLVWALYYLMSCQYQSATATATPSLTTTMTQ--------VNSSGLFPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSGSVISA--TVSNFPHTGQDQDASLLPQPLPLQGSSPIGAPLADIKSSSPPTLPRGVLPSAGNVDQSVFKFVLNYSQNDDLNLGLARLYCEPEGWDLRPMLSPARDPKDFLTHELARLEARFRRLTGLDYRRIMDEDVAATAQAGGSLGGLGGSGLLAPTDFRAKVPKALLALQSAIRTRPYPGRGTLQPSHIFLDQPDPELLSFCAV-GHNTGGLLRTXXXXXXXXXXXXXXXXXXXXXXXDC--DQMDVAGPAAAEGEGHSSRLISLGEVRLARVEGRRELLRHLLERGLPQNQQFEQAACAVLLPERFNEARARFCFSDWILNAANAGLPNVEVEQPPYAVVRTIRKVTVRPLPSPARVPALAALFPAVPDVGLNGQASDIAAGPLHEQYCQQQPLQQHHPSGLPSPTSSSTSVVSPRSPSPDSESVSTCFM--------XXXXXXXXXXXXXXXXXXXXRIH-PANLDPDNLLSASPAYKKVAWHAKLSDGTAIRTAHVREPGGSHSGGASSSSSGTPGSHAR----------------KMSSRGAGRGEASKDFVALGKRGISSP 1189 MTLSY DLVLGLCVNADT+DD EC +V R G Q C Q +S+ R + D G GG QPF EALGRFDFR+KPTNFAPGFKTVRST+LMDWD IKLWYQGQ LL+++ERREYV GLRW+PF P PPAGEPVVR P EPLDEEEGQ+LRVLRD G NLRPV VDGDGSCLVHAVSTALTGSQ+Y DALRWAAHKELRDHA FY+QAGFVT+QDKARFLPRL+ AA +MR FDN +TGRPKWT AF+EEAVEKARPSEGE RGPAQYLEEIHVAALANA+RRPIMILAEGFQGGLFLPLRHDPEDCRL A +F+FLQY+HYIPLV QDPRDFW WA GP+SG GD+AALEALR+YE+ERG+ NHRIPEF EEILTMCVG+AAQ MEE+L+TY+VP DRE YRQAFG+PE M+ALPL VVFE+ + ARC+K+V+NLKTMNALFRALG+EV + + + +VV+LSL++H+VDF+RY LVWALYYLMSC++QS A++ L TT ++ P A S SA T S TG+ A + LQ S P I ++ PRG+LPS+G++DQ VFKFVLNYSQNDDLNLGLARLYCE EGWDLR ML P+RDPKDFLT E+ARLE RF+RLTGLDYRR+MDED+ Q G ++G LGG A + RA+VPKAL LQ+AIRTRPYPGRG + SH+ L+QP+P+LLS+C + G +T + + + +QMDVA A EG G +S L+ L ++ L + RRELL+ LL RGLPQNQQFEQ ACAVLLPERFNEAR RFCF DWILNAA+AGLPNVE +Q P A R ++K+ VRPL SPA VP LAALF P + + A P + +QQ +Q PS SSS +SP PSP S S S + + H P+++ P S SPA+KKVAW KL DGT + TAHV+ GG G + + G ++++ K SS+ G + K+F LGKRGISSP Sbjct: 1 MTLSYKDLVLGLCVNADTHDDAECTQQSVRTRDIALQGKGQQLVCINSPNSGMTPVIDDIAAQGDSRARQREQTGALDPLCTKGGGSQGCGGT--DQPFQVEALGRFDFRLKPTNFAPGFKTVRSTMLMDWDSIKLWYQGQNLLRDLERREYVAAGLRWSPFMPFPPAGEPVVRRPIEPLDEEEGQALRVLRDLGVNLRPVSVDGDGSCLVHAVSTALTGSQIYSDALRWAAHKELRDHAAFYRQAGFVTDQDKARFLPRLDKAAREARARGQDDRERSMRQAATEMRKFDNVKTGRPKWTAAFVEEAVEKARPSEGEARGPAQYLEEIHVAALANAVRRPIMILAEGFQGGLFLPLRHDPEDCRLLA--------------------IHSPDRRDRTSGQTEDETWADALAVPPVFIFLQYNHYIPLVQQDPRDFWTWAAGPESGLEGDEAALEALRMYESERGTANHRIPEFVEEILTMCVGIAAQGMEEMLATYQVPATDREMYRQAFGKPELMKALPLMVVFEE--TPARCEKSVRNLKTMNALFRALGLEVDDD-DLPTVRDVVFLSLYIHRVDFSRYRHLVWALYYLMSCEHQSVDASSLVDLATTXXXXXXXXXXLAGTARSSPTARAFNSTSCIGRSKKLTSISKGDKKSHTFPSHVSFSAVTTDSILQDTGRIAAAPSMSHSTSLQQSYP------HIATAGIHVFPRGLLPSSGDLDQKVFKFVLNYSQNDDLNLGLARLYCEAEGWDLRLMLRPSRDPKDFLTKEMARLERRFQRLTGLDYRRVMDEDL---TQDGRTVGALGGVEATASAEPRARVPKALAVLQNAIRTRPYPGRGAVLSSHVLLEQPNPDLLSWCLLEGESTTTSVNSCDEGICNVSSASSTSSNGPFISSNAGSNQMDVA-RNAFEGGGLASFLLPLAQIFLQHTDARRELLKELLRRGLPQNQQFEQVACAVLLPERFNEARTRFCFLDWILNAADAGLPNVEKKQHPAAHHRAVKKIIVRPLTSPACVPPLAALFS--PQHAIRREQKPALAAPASSEQYRQQMVQPEPPSWSTVQDSSSLPPLSPPFPSPTSGSGSNLVVLKTYRPECDERHHGREEEKKLQQHCRPIQYHIPSDVHPSCTPSCSPAHKKVAWSVKLGDGTDVCTAHVQGNGGRKGIGRAVENIGIDATNSKSRREHLVQKPSKVLPGKTSSQTVGGIQQGKEFGVLGKRGISSP 1195
BLAST of NO21G01710 vs. NCBI_GenBank
Match: GBG29530.1 (Tumor necrosis factor alpha-induced protein 3 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 82.0 bits (201), Expect = 1.300e-11 Identity = 60/186 (32.26%), Postives = 82/186 (44.09%), Query Frame = 0 Query: 181 SLRVLRD-YGANLRPVWVDGDGSCLVHAVSTALTGSQLYYDALRWAAHKELRDHATFYQQAGFVTEQDKARFLPRLEAAAXXXXXXXXXXXXXXXXXXXXQMRDFDNSRTGRPKWTPAFLEEAVEKARPSEGEMRGPAQYLEEIHVAALANALRRPIMIL-------AEGFQGGLFLPLRHDPEDC 359 +L LRD +G L PV VD DGSCL HA+S L G ++ YDALR A ELR+HA FY++ D+ F F +++A+P G + G ++L H+ LAN LRRPI++L + + GL+LPLRH E C Sbjct: 64 TLTALRDNFGVELVPVKVDSDGSCLPHAISRCLVGKEVLYDALRLALTHELREHAAFYREI-LGAGMDEETF--------------------------------------------ATFWLGIIDEAKPVHGALTG--RWLGPEHILGLANVLRRPILLLDCPKLMAQDDNRCGLYLPLRHGREAC 202
BLAST of NO21G01710 vs. NCBI_GenBank
Match: XP_002410713.1 (Deubiquitinating protein VCIP135, putative [Ixodes scapularis] >EEC04585.1 Deubiquitinating protein VCIP135, putative, partial [Ixodes scapularis]) HSP 1 Score: 72.8 bits (177), Expect = 8.200e-9 Identity = 60/187 (32.09%), Postives = 77/187 (41.18%), Query Frame = 0 Query: 182 LRVLRDYGANLRPVWVDGDGSCLVHAVSTALTGSQLYYDALRWAAHKELRDHATFYQQ--AGFVTEQDKARFLPRLEAAAXXXXXXXXXXXXXXXXXXXXQMRDFDNSRTGRPKWTPAFLEEAVEKARPSEGEMRGPAQYLEEIHVAALANALRRPIMIL-------AEGFQGGLFLPLRHDPEDCR 360 +R D L PV VDGDG CLVHAVS AL G +L++ LR + L +H Y++ FV E++ A + + P FL P EGE+ G L IHV +LAN LRRPI++L + G LFLP PE CR Sbjct: 183 VRAHNDGEDRLLPVHVDGDGHCLVHAVSRALVGRELFWHPLRCNLKRHLEEHLAKYKELLKDFVDEKEWASIIAECD---------------------------------------PEFL--------PPEGELLG----LRNIHVFSLANVLRRPIILLDSLAGMQSLGDYAALFLPSLVAPERCR 318
BLAST of NO21G01710 vs. NCBI_GenBank
Match: XP_015912767.1 (deubiquitinating protein VCIP135-like [Parasteatoda tepidariorum]) HSP 1 Score: 71.2 bits (173), Expect = 2.400e-8 Identity = 52/175 (29.71%), Postives = 72/175 (41.14%), Query Frame = 0 Query: 192 LRPVWVDGDGSCLVHAVSTALTGSQLYYDALRWAAHKELRDHATFYQQAGFVTEQDKARFLPRLEAAAXXXXXXXXXXXXXXXXXXXXQMRDFDNSRTGRPKWTPAFLEEAVEKARPSEGEMRGPAQYLEEIHVAALANALRRPIMILAE-------GFQGGLFLPLRHDPEDCR 360 L P++ DGDG CLVHA+S AL G +L++ LR K ++ YQ+ +DF R A +EE+ + +P EGE+ G L +H+ LAN L+RPI++L G LFLP PEDCR Sbjct: 167 LVPIYTDGDGHCLVHAISRALLGRELFWHPLRCCLKKHFENNLNNYQEL----------------------------------------FKDFVEPEDWR-----AIIEESDPEFKPPEGELHG----LRNVHIFGLANVLKRPIILLDSLECMKKCGDYSALFLPGFIPPEDCR 292
BLAST of NO21G01710 vs. NCBI_GenBank
Match: XP_013409530.1 (deubiquitinating protein VCIP135 [Lingula anatina]) HSP 1 Score: 70.5 bits (171), Expect = 4.000e-8 Identity = 57/187 (30.48%), Postives = 80/187 (42.78%), Query Frame = 0 Query: 180 QSLRVLRDYGANLRPVWVDGDGSCLVHAVSTALTGSQLYYDALRWAAHKELRDHATFYQQAGFVTEQDKARFLPRLEAAAXXXXXXXXXXXXXXXXXXXXQMRDFDNSRTGRPKWTPAFLEEAVEKARPSEGEMRGPAQYLEEIHVAALANALRRPIMIL-------AEGFQGGLFLPLRHDPEDCR 360 + +R + + NL PV DGDG CLVHAVS AL G +L++ ALR + L+ H F + D + L +DF + +W +EE P +GE G L IH+ LAN L+RPI++L + G G+FLP + PE CR Sbjct: 162 EMIRKMNNDVENLLPVHADGDGHCLVHAVSRALIGRELFWHALR----QNLKTH--------FTAKLDNYKAL----------------------------FQDF----IDQSEWN-LIIEECDPDFLPPDGEAHG----LRNIHIFGLANVLKRPIILLDSMTGMQSSGDYSGVFLPAFNPPEKCR 299
BLAST of NO21G01710 vs. NCBI_GenBank
Match: XP_023229594.1 (deubiquitinating protein VCIP135-like [Centruroides sculpturatus]) HSP 1 Score: 68.2 bits (165), Expect = 2.000e-7 Identity = 54/189 (28.57%), Postives = 81/189 (42.86%), Query Frame = 0 Query: 181 SLRVLRDYG---ANLRPVWVDGDGSCLVHAVSTALTGSQLYYDALRWAAHKELRDHATFYQQAGFVTEQDKARFLPRLEAAAXXXXXXXXXXXXXXXXXXXXQMRDFDNSRTGRPKWTPAFLEEAVEKARPSEGEMRGPAQYLEEIHVAALANALRRPIMIL-------AEGFQGGLFLPLRHDPEDCR 360 +L +++DY L PV DGDG CLVHA+S AL G +L++ LR + ++ Y++ +++F + R +W A + E PS+GE+ G L IH+ LAN L+RPI++L + G GLFLP PE+CR Sbjct: 155 TLELVKDYNDGEERLIPVHADGDGHCLVHAISRALIGRELFWHPLRCNLKRHFEENLQKYKEL----------------------------------------LKEFIDER----EW-DAIIAECDPDFVPSDGELLG----LRNIHIFGLANVLKRPIILLDSLAGMQSLGDYSGLFLPSLVKPEECR 294
BLAST of NO21G01710 vs. NCBI_GenBank
Match: XP_011666388.1 (PREDICTED: LOW QUALITY PROTEIN: deubiquitinating protein VCIP135 [Strongylocentrotus purpuratus]) HSP 1 Score: 67.8 bits (164), Expect = 2.600e-7 Identity = 55/175 (31.43%), Postives = 76/175 (43.43%), Query Frame = 0 Query: 192 LRPVWVDGDGSCLVHAVSTALTGSQLYYDALRWAAHKELRDHATFYQQAGFVTEQDKARFLPRLEAAAXXXXXXXXXXXXXXXXXXXXQMRDFDNSRTGRPKWTPAFLEEAVEKARPSEGEMRGPAQYLEEIHVAALANALRRPIMIL-------AEGFQGGLFLPLRHDPEDCR 360 L P+ DGDG CLVH +S AL G +L++ ALR L+ H F + D+ + L RDF +S +W P + E+ P E G L+ IH+ LAN LRRPI++L + G G+FLP+ H P+DCR Sbjct: 175 LIPIHADGDGHCLVHGISRALVGRELFWHALR----TSLKIH--------FERDLDRYKNL----------------------------FRDFVDS----DEW-PQIIAESDPDYLPGPNEAMG----LQNIHIFGLANILRRPIVLLDSLSGLESFGDYSGVFLPVLHTPDDCR 300
BLAST of NO21G01710 vs. NCBI_GenBank
Match: XP_022200445.1 (LOW QUALITY PROTEIN: deubiquitinating protein VCIP135-like [Nilaparvata lugens]) HSP 1 Score: 66.2 bits (160), Expect = 7.600e-7 Identity = 55/194 (28.35%), Postives = 75/194 (38.66%), Query Frame = 0 Query: 181 SLRVLRDYGANLR---PVWVDGDGSCLVHAVSTALTGSQLYYDALRWAAHKELRDHATFYQQAGFVTEQDKARFLPRLEAAAXXXXXXXXXXXXXXXXXXXXQMRDFDNSRTGRPKWTPAFLEEAVEKARPSEGEMRGPAQYLEEIHVAALANALRRPIMIL-------AEGFQGGLFLPLRHDPEDCRLPASP 365 +L++L+ Y ++ P+ VDGDG CLVHAVS AL G QL++ LR + H YQ + DF N R +W P ++E P + E+ G L +H+ LAN LRRPI++L LFLP PE C P Sbjct: 149 TLQLLKTYNDDIEVLVPLHVDGDGHCLVHAVSRALVGRQLFWYPLRLGLKQHFTSHLEQYQAL----------------------------------------LGDFIN----RSEW-PCIIQECDPDYHPLDDEILG----LRNVHIFGLANLLRRPILLLDNLSGINTSAEYSALFLPGLSSPESCSKKVVP 293
BLAST of NO21G01710 vs. NCBI_GenBank
Match: XP_014677448.1 (PREDICTED: deubiquitinating protein VCIP135-like [Priapulus caudatus]) HSP 1 Score: 65.9 bits (159), Expect = 1.000e-6 Identity = 53/176 (30.11%), Postives = 74/176 (42.05%), Query Frame = 0 Query: 191 NLRPVWVDGDGSCLVHAVSTALTGSQLYYDALRWAAHKELRDHATFYQQAGFVTEQDKARFLPRLEAAAXXXXXXXXXXXXXXXXXXXXQMRDFDNSRTGRPKWTPAFLEEAVEKARPSEGEMRGPAQYLEEIHVAALANALRRPIMIL--AEGFQ-----GGLFLPLRHDPEDCR 360 NL PV+ GDG CLVHAVS AL G +L++ ALR + + + Y++ Q RDF + +W+ + E +P +GE G L H+ LAN L RPI++L EG Q G+FLP +PE+CR Sbjct: 204 NLVPVYASGDGHCLVHAVSRALVGRELFWHALRMSLKRHFTEKLGIYRE----------------------------------------QFRDFISG----AEWSD-IIAECDPFFQPPDGEPLG----LRTAHIFGLANVLHRPIILLDSLEGMQSLGEHSGVFLPGLLEPEECR 330 The following BLAST results are available for this feature:
BLAST of NO21G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 9 Position : 0 Zoom : x 1
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G01710 ID=NO21G01710|Name=NO21G01710|organism=Nannochloropsis oceanica|type=gene|length=3863bpback to top protein sequence of NO21G01710.1 >NO21G01710.1-protein ID=NO21G01710.1-protein|Name=NO21G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1190bpback to top Synonyms
Publications
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