NO21G01560, NO21G01560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G01560 vs. NCBI_GenBank
Match: EWM29048.1 (phytanoyl- dioxygenase [Nannochloropsis gaditana]) HSP 1 Score: 286.6 bits (732), Expect = 5.900e-74 Identity = 137/181 (75.69%), Postives = 155/181 (85.64%), Query Frame = 0 Query: 19 GNKELQL---MDDPEVWEDYRTRFETEGYLVLEGYWSRAKCAALRGRMNALIQGFDLAAHRSVFSTDDQSRISDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKIGHALHDLDPNFQQVTYTPQIGKLARAVGGLSVPLVAQSMYIFEQPRIGRKVGAHQDGTFLYTEPQSVVGF 197 G+++L+L +D ++WE YR RFE +GYLVLEGYWS+A C ALR RM+ L+ GFDLAAH SVFSTD+Q+R SD YFL SGDKI +FWE A DK TGAFRQPRA SINK+GHALHDLDP FQ+VTYTPQIG+LARAVGGL VPLVAQSMYIF+QPRIG KVGAHQDGTFLYTEPQSVVGF Sbjct: 10 GSEDLRLPGIEEDRDLWEAYRRRFEEDGYLVLEGYWSKATCTALRERMDHLVAGFDLAAHDSVFSTDEQNRTSDTYFLESGDKIHYFWEEGAIDKATGAFRQPRATSINKVGHALHDLDPLFQKVTYTPQIGQLARAVGGLHVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGF 190
BLAST of NO21G01560 vs. NCBI_GenBank
Match: CBN78369.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 193.4 bits (490), Expect = 6.900e-46 Identity = 92/164 (56.10%), Postives = 117/164 (71.34%), Query Frame = 0 Query: 33 EDYRTRFETEGYLVLEGYWSRAKCAALRGRMNALIQGFDLAAHRSVFSTDDQSRISDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKIGHALHDLDPNFQQVTYTPQIGKLARAVGGLSVPLVAQSMYIFEQPRIGRKVGAHQDGTFLYTEPQSVVGF 197 E+ R F +GYLVL +WS+ +C +R R+ ++Q DL R++FSTD+ D YFLGSGDKIRFFWEA AFD + G F R SINKIGHALHDLDP ++ +Y ++G+++R + GLS PL QSMYIF+QPRIG +V HQDG FLYTEPQSVVG+ Sbjct: 18 EEQREHFNEKGYLVLPDWWSKQECEEIRERVQQVVQDMDLDEARTIFSTDESKHAEDAYFLGSGDKIRFFWEAGAFD-DKGEFVHDRLKSINKIGHALHDLDPVMKKYSYEKRVGQVSRDL-GLSTPLAVQSMYIFKQPRIGGEVTPHQDGAFLYTEPQSVVGY 179
BLAST of NO21G01560 vs. NCBI_GenBank
Match: WP_053231552.1 (phytanoyl-CoA dioxygenase family protein [Sandaracinus amylolyticus] >AKF04184.1 Phytanoyl-CoA dioxygenase domain containing 1 [Sandaracinus amylolyticus]) HSP 1 Score: 182.2 bits (461), Expect = 1.600e-42 Identity = 90/162 (55.56%), Postives = 117/162 (72.22%), Query Frame = 0 Query: 34 DYRTRFETEGYLVLEGYWSRAKCAALRGRMNALIQGFDLAAHRSVFSTDDQSRISDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKIGHALHDLDPNFQQVTYTPQIGKLARAVGGLSVPLVAQSMYIFEQPRIGRKVGAHQDGTFLYTEPQSVVG 196 D R R+ +G+LVLEG+ A+C ALR + L+ FD AHRSVF+T++Q+R SDD+FL S +IRFF+E DAFD ETGA RQP+ SINKIGHALHDLDP + P+I L + GL+ PL+ QSMYIF+QP IG +V HQD TFL+TEP++++G Sbjct: 7 DARERYHRDGFLVLEGFVDPARCDALRAHADRLVAAFDPDAHRSVFTTNEQTRHSDDHFLDSAGEIRFFFEEDAFD-ETGALRQPKERSINKIGHALHDLDPEIDAFSRDPKIETLVAEL-GLAAPLLMQSMYIFKQPFIGGEVRCHQDSTFLHTEPEAMLG 166
BLAST of NO21G01560 vs. NCBI_GenBank
Match: APR81959.1 (Phytanoyl-CoA dioxygenase domain containing 1 [Minicystis rosea]) HSP 1 Score: 176.8 bits (447), Expect = 6.600e-41 Identity = 92/169 (54.44%), Postives = 114/169 (67.46%), Query Frame = 0 Query: 29 PEVWEDYRTRFETEGYLVLEGYWSRAKCAALRGRMNALIQGFDLAAHRSVF-STDDQSRISDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKIGHALHDLDPNFQQVTYTPQIGKLARAVGGLSVPLVAQSMYIFEQPRIGRKVGAHQDGTFLYTEPQSVVGF 197 P + E+ RTR++ +G+LVLEG+ S C AL R L+ FD S+F S D QSR +D YFLGSGD +RFF+EA AFD E G RQ +A SINKIGHALHDLD F + TP + +AR V G+ P + QSMYIF+QP IG +V HQD T+LYT+P SVVGF Sbjct: 9 PRITEEQRTRYDRDGFLVLEGFASPEACDALMARARELVAAFDPPDVASIFVSGDAQSRTTDAYFLGSGDTVRFFFEAGAFD-ERGQLRQDKALSINKIGHALHDLDATFASFSRTPALAAVARDV-GMRAPRLMQSMYIFKQPHIGGEVVCHQDATYLYTDPISVVGF 175
BLAST of NO21G01560 vs. NCBI_GenBank
Match: WP_089287645.1 (MULTISPECIES: phytanoyl-CoA dioxygenase family protein [Azospirillum] >SNS29648.1 phytanoyl-CoA hydroxylase [Azospirillum sp. RU38E] >SNS48077.1 phytanoyl-CoA hydroxylase [Azospirillum sp. RU37A]) HSP 1 Score: 175.6 bits (444), Expect = 1.500e-40 Identity = 86/157 (54.78%), Postives = 110/157 (70.06%), Query Frame = 0 Query: 39 FETEGYLVLEGYWSRAKCAALRGRMNALIQGFDLAAHRSVFSTDDQSRISDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKIGHALHDLDPNFQQVTYTPQIGKLARAVGGLSVPLVAQSMYIFEQPRIGRKVGAHQDGTFLYTEPQSVVG 196 + +G+L+LEG+ A C AL + L+ GFD AAH SVFST +Q + SDDYFL SGD+IRFF+E +AFD G RQ ++ SINKIGHALHD DP F Q + P++ + + G++ PL+ QSMYIF+QP IG +V HQD TFLYTEP SVVG Sbjct: 12 YHRDGFLLLEGFADPADCRALMDQAGRLVAGFDAAAHASVFSTVNQQKTSDDYFLSSGDQIRFFFEEEAFD-AAGHLRQEKSLSINKIGHALHDRDPVFSQFSRDPRLASITADI-GMARPLLMQSMYIFKQPHIGGEVVCHQDSTFLYTEPMSVVG 166
BLAST of NO21G01560 vs. NCBI_GenBank
Match: WP_094453107.1 (phytanoyl-CoA dioxygenase family protein [Niveispirillum lacus] >OYQ37255.1 phytanoyl-CoA dioxygenase [Niveispirillum lacus]) HSP 1 Score: 175.6 bits (444), Expect = 1.500e-40 Identity = 87/168 (51.79%), Postives = 114/168 (67.86%), Query Frame = 0 Query: 29 PEVWEDYRTRFETEGYLVLEGYWSRAKCAALRGRMNALIQGFDLAAHRSVFSTDDQSRISDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKIGHALHDLDPNFQQVTYTPQIGKLARAVGGLSVPLVAQSMYIFEQPRIGRKVGAHQDGTFLYTEPQSVVGF 197 P + D + +G+LVL G+ S A C AL + L+ GFD AH SVFST +Q ++SDDYF+ SGD+IRFF+E +AFD + G RQ + SINK+GHALHD DP F + + ++G +A + G+ PL+ QSMYIF+QP IG +V HQD TFLYTEP SVVGF Sbjct: 2 PHLNRDQIDAYHRDGFLVLPGFASDAACDALMAQAGRLVDGFDADAHASVFSTVNQQKMSDDYFMSSGDQIRFFFEEEAFDAQ-GRLRQEKHLSINKLGHALHDRDPVFDRFSRDARLGVIASDI-GMEKPLLMQSMYIFKQPHIGGEVVCHQDSTFLYTEPMSVVGF 167
BLAST of NO21G01560 vs. NCBI_GenBank
Match: WP_035708429.1 (phytanoyl-CoA dioxygenase family protein [Niveispirillum irakense]) HSP 1 Score: 173.3 bits (438), Expect = 7.300e-40 Identity = 83/162 (51.23%), Postives = 110/162 (67.90%), Query Frame = 0 Query: 34 DYRTRFETEGYLVLEGYWSRAKCAALRGRMNALIQGFDLAAHRSVFSTDDQSRISDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKIGHALHDLDPNFQQVTYTPQIGKLARAVGGLSVPLVAQSMYIFEQPRIGRKVGAHQDGTFLYTEPQSVVG 196 + + + +G+L+LE + S C L + L++GFD AH SVFST +Q + SDDYFL SGD IRFF+E +AFD ETG Q +A SINKIGHA+HD DP F Q + P++ + + G++ PL+ QSMYIF+QP IG +V HQD TFLYT+P SVVG Sbjct: 8 EQKAAYHRDGFLLLENFASAPDCEGLMEQAGRLVEGFDADAHASVFSTTNQQKTSDDYFLSSGDHIRFFFEEEAFD-ETGRLHQEKALSINKIGHAMHDRDPVFSQFSRDPRLASITADI-GMAQPLLMQSMYIFKQPHIGGEVVCHQDSTFLYTDPMSVVG 167
BLAST of NO21G01560 vs. NCBI_GenBank
Match: AKJ02956.1 (Phytanoyl-CoA dioxygenase domain containing 1 [Archangium gephyra]) HSP 1 Score: 172.2 bits (435), Expect = 1.600e-39 Identity = 86/158 (54.43%), Postives = 113/158 (71.52%), Query Frame = 0 Query: 39 FETEGYLVLEGYWSRAKCAALRGRMNALIQGFDLAAHRSVFSTDDQSRISDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKIGHALHDLDPNFQQVTYTPQIGKLARAVGGLSVPLVAQSMYIFEQPRIGRKVGAHQDGTFLYTEPQSVVGF 197 FE +G+LVL G+ A C AL+ R L+ GF S+F+T+DQ+R SD+YFL SGD IRFF+E +AF + G+ RQ +A SINKIGHALHDLDP F++ + TP++ LA + GL+ PL+ QSMYIF+QP IG +V HQD TFLYTEP + +GF Sbjct: 11 FERQGFLVLPGFAPAAACDALKARAEQLVAGFQ-PETVSIFTTNDQTRTSDEYFLASGDDIRFFFEENAF-RPDGSLRQDKALSINKIGHALHDLDPLFERFSRTPELAGLASEL-GLTKPLLLQSMYIFKQPHIGGEVNCHQDATFLYTEPSTCLGF 165
BLAST of NO21G01560 vs. NCBI_GenBank
Match: WP_047862199.1 (phytanoyl-CoA dioxygenase family protein [Archangium gephyra]) HSP 1 Score: 172.2 bits (435), Expect = 1.600e-39 Identity = 86/158 (54.43%), Postives = 113/158 (71.52%), Query Frame = 0 Query: 39 FETEGYLVLEGYWSRAKCAALRGRMNALIQGFDLAAHRSVFSTDDQSRISDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKIGHALHDLDPNFQQVTYTPQIGKLARAVGGLSVPLVAQSMYIFEQPRIGRKVGAHQDGTFLYTEPQSVVGF 197 FE +G+LVL G+ A C AL+ R L+ GF S+F+T+DQ+R SD+YFL SGD IRFF+E +AF + G+ RQ +A SINKIGHALHDLDP F++ + TP++ LA + GL+ PL+ QSMYIF+QP IG +V HQD TFLYTEP + +GF Sbjct: 7 FERQGFLVLPGFAPAAACDALKARAEQLVAGFQ-PETVSIFTTNDQTRTSDEYFLASGDDIRFFFEENAF-RPDGSLRQDKALSINKIGHALHDLDPLFERFSRTPELAGLASEL-GLTKPLLLQSMYIFKQPHIGGEVNCHQDATFLYTEPSTCLGF 161
BLAST of NO21G01560 vs. NCBI_GenBank
Match: WP_102113666.1 (phytanoyl-CoA dioxygenase family protein [Niveispirillum cyanobacteriorum] >AUN32116.1 phytanoyl-CoA dioxygenase [Niveispirillum cyanobacteriorum]) HSP 1 Score: 172.2 bits (435), Expect = 1.600e-39 Identity = 86/168 (51.19%), Postives = 113/168 (67.26%), Query Frame = 0 Query: 29 PEVWEDYRTRFETEGYLVLEGYWSRAKCAALRGRMNALIQGFDLAAHRSVFSTDDQSRISDDYFLGSGDKIRFFWEADAFDKETGAFRQPRAASINKIGHALHDLDPNFQQVTYTPQIGKLARAVGGLSVPLVAQSMYIFEQPRIGRKVGAHQDGTFLYTEPQSVVGF 197 P + +D + +G+LVL G+ S A C AL + L+ GFD AH SVFST +Q + SDDYF+ SG++IRFF+E +AFD G RQ + SINKIGHA+HD DP F + ++G +A + G++ PL+ QSMYIF+QP IG +V HQD TFLYTEP SVVGF Sbjct: 2 PYLTQDQIDAYHRDGFLVLPGFASDAACDALMAQAGRLVDGFDADAHASVFSTVNQQKTSDDYFMSSGNQIRFFFEEEAFD-TAGRLRQEKHLSINKIGHAMHDRDPVFDGFSRDARLGAIAGDI-GMAKPLLMQSMYIFKQPHIGGEVVCHQDSTFLYTEPMSVVGF 167 The following BLAST results are available for this feature:
BLAST of NO21G01560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G01560 ID=NO21G01560|Name=NO21G01560|organism=Nannochloropsis oceanica|type=gene|length=591bpback to top protein sequence of NO21G01560.1 >NO21G01560.1-protein ID=NO21G01560.1-protein|Name=NO21G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=197bpback to top Synonyms
Publications
|