NO21G01540, NO21G01540 (gene) Nannochloropsis oceanica

Overview
NameNO21G01540
Unique NameNO21G01540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3852
Alignment locationchr21:457524..461375 +

Link to JBrowse

Properties
Property NameValue
DescriptionPyridine nucleotide-disulfide oxidoreductase domain-containing protein 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:457524..461375 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
Homology
BLAST of NO21G01540 vs. NCBI_GenBank
Match: EWM22644.1 (pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 [Nannochloropsis gaditana])

HSP 1 Score: 411.4 bits (1056), Expect = 3.300e-111
Identity = 198/255 (77.65%), Postives = 222/255 (87.06%), Query Frame = 0
Query:  143 SRKYLASPYHFIAPTRIKRDAIVVGGGHNGLVAAAYLAKQGLDVLVLERRHVVGGAAVTEELVNGFKFSRASYLAGLLRPQIITDLALEKHGFKYLPRDPSSFTPTGEVGKYLMLGSNEEKNWQSIAQFSLRDADAFIEYERFLGQARELIEPLLDSSPPNPWDGQAKWSERKHTFATLGKLLRLGWKSRGRLVSFYELFTAPATNLLDRWFESEVVKATLATDAVIGAMVGPKSPGSAYVLLHHVMGEEGGRKG 398
            S KY  SP+ FIAP R KRDAI+VGGGHNGLVAAAYLAKQGLDVLVLERR ++GGAAVTEE+V+GFKFSRASYLAGLLRPQIIT+L LEKHGFKYLPRDPSSFTPT   G++L+LGS+EE+NWQSIAQFS RDADAF+EYE FLG+AREL+EPLLD  PPNP+D  AKW ER+HT  TL  LL  GWK R  L+ FYELFTAPA +LLDRWFES+++KATLATDAVIGAM+GP+  GSAYVLLHHVMGE  GRKG
Sbjct:   41 SPKYETSPFPFIAPVRRKRDAIIVGGGHNGLVAAAYLAKQGLDVLVLERRTLLGGAAVTEEIVHGFKFSRASYLAGLLRPQIITELGLEKHGFKYLPRDPSSFTPTNVAGRHLILGSSEEENWQSIAQFSTRDADAFVEYEDFLGKARELVEPLLDGGPPNPFDQAAKWKERRHTLQTLKTLLSAGWKHRQSLLPFYELFTAPAAHLLDRWFESDILKATLATDAVIGAMIGPRQAGSAYVLLHHVMGEAAGRKG 295          
BLAST of NO21G01540 vs. NCBI_GenBank
Match: XP_004991850.1 (FAD dependent oxidoreductase [Salpingoeca rosetta] >EGD75393.1 FAD dependent oxidoreductase [Salpingoeca rosetta])

HSP 1 Score: 273.1 bits (697), Expect = 1.400e-69
Identity = 145/248 (58.47%), Postives = 174/248 (70.16%), Query Frame = 0
Query:  154 IAPTRIKRDAIVVGGGHNGLVAAAYLAKQGLDVLVLERRHVVGGAAVTEELVNGFKFSRASYLAGLLRPQIITDLALEKHGFKYLPRDPSSFTPTGEVGKYLMLGSNEEKNWQSIAQFSLRDADAFIEYERFLGQARELIEPLLDSSPPNPWDGQAKWSERKHTFATLGK----LLRLGWKSRGRLVSFYELFTAPATNLLDRWFESEVVKATLATDAVIGAMVGPKSPGSAYVLLHHVMGEEGGRKG 398
            + P     DAI+VGGGHNGLVAAAYLA+QG  VLVLE+   VGGAAV+ E+V GFKFSRASYLAGL+RP I+ +L L KHG ++LPRDPSSFTPT   G++LM   +E K   SIAQFS  DADAF +YE  +G+ R+LI+P L+   PN    + +       FA L      LL   +K +  L  FYEL TAPA+ +LDRWFESE++K TLATDAVIG+M  P  PGSAYVLLHHVMGE  GRKG
Sbjct:    4 LRPVSRAYDAIIVGGGHNGLVAAAYLARQGGKVLVLEKNDQVGGAAVSSEIVPGFKFSRASYLAGLIRPSIVKELDLHKHGLRFLPRDPSSFTPTKTPGQHLMFWDDETKTAASIAQFSKHDADAFPKYEAKIGRFRDLIQPFLERPLPNVSFDELQRGNLM-AFARLASQHFDLLTHIFKYKKELAEFYELLTAPASQILDRWFESEMLKTTLATDAVIGSMAAPSDPGSAYVLLHHVMGEVAGRKG 250          
BLAST of NO21G01540 vs. NCBI_GenBank
Match: XP_018417950.1 (PREDICTED: pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 [Nanorana parkeri])

HSP 1 Score: 262.3 bits (669), Expect = 2.500e-66
Identity = 134/249 (53.82%), Postives = 173/249 (69.48%), Query Frame = 0
Query:  155 APTRIKRDAIVVGGGHNGLVAAAYLAKQGLDVLVLERRHVVGGAAVTEELVNGFKFSRASYLAGLLRPQIITDLALEKHGFKYLPRDPSSFTP-----TGEVGKYLMLGSNEEKNWQSIAQFSLRDADAFIEYERFLGQARELIEPLLDSSPPNPWD-GQAKWSERKHTFATLGKLLRLGWKSRGRLVSFYELFTAPATNLLDRWFESEVVKATLATDAVIGAMVGPKSPGSAYVLLHHVMGEEGGRKG 398
            A  +++ DA+++GGGHNGLVAAAYL K GL  +VLERRHV+GGAAVTEE++ GFKFSRASYL  LLRPQI  DL L+KHG K   RDP SFTP      G+  + L+LG +  KN Q IAQFS +DA+A+ +YE F+ +    I+PLLD+ P +     Q   ++R  +  TL  L++ G     ++  +YE+ T P + +LD+WFESE +K TLATDAVIGAM  P +PGS YVLLHHVMGE  G+KG
Sbjct:   25 AQLKVEYDAVIIGGGHNGLVAAAYLQKSGLSAVVLERRHVIGGAAVTEEIIPGFKFSRASYLLSLLRPQIYKDLELKKHGLKIYFRDPHSFTPMLENVKGQPPRSLLLGLDMVKNQQQIAQFSKKDAEAYPKYEHFMNRLVSAIDPLLDAPPVDTAAITQGSLAQRVKSLKTLQPLMKAGITLGSQIPKYYEVLTGPISKILDQWFESEPLKCTLATDAVIGAMASPSTPGSGYVLLHHVMGELEGKKG 273          
BLAST of NO21G01540 vs. NCBI_GenBank
Match: XP_009464521.1 (PREDICTED: pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 [Nipponia nippon])

HSP 1 Score: 260.4 bits (664), Expect = 9.500e-66
Identity = 137/240 (57.08%), Postives = 168/240 (70.00%), Query Frame = 0
Query:  162 DAIVVGGGHNGLVAAAYLAKQGLDVLVLERRHVVGGAAVTEELVNGFKFSRASYLAGLLRPQIITDLALEKHGFKYLPRDPSSFTPTGE---VGKYLMLGSNEEKNWQSIAQFSLRDADAFIEYERFLGQARELIEPLLDSSPPNPWD-GQAKWSERKHTFATLGKLLRLGWKSRGRLVSFYELFTAPATNLLDRWFESEVVKATLATDAVIGAMVGPKSPGSAYVLLHHVMGEEGGRKG 398
            DA+V+G GHNGLVAAAYL + G+   VLE+RHV+GGAAVTEE+V GFKFSRASYL  LLRPQI T+L L++HG + LPRDP SFTP  E     + L+LG N  +  Q IAQFS +DA A+ EYE F+G     ++PLLD+ P +    GQ    +R     TL  LLR G     +L  +YE+ TAP + +LD+WFESE +KATLATDAVIGAM  P +PGS YVLLHHVMGE  GR+G
Sbjct:   46 DAVVIGAGHNGLVAAAYLQRAGVRTAVLEKRHVLGGAAVTEEIVPGFKFSRASYLLSLLRPQIYTELELQRHGLRVLPRDPYSFTPLLEDKSPPRSLLLGHNMAQTQQQIAQFSQKDAQAYPEYEAFMGGLVSALDPLLDAPPVDTAVLGQGSLIQRLRALQTLRPLLRAGLALGRQLPRYYEVLTAPISKILDQWFESEPLKATLATDAVIGAMASPHTPGSGYVLLHHVMGELEGRRG 285          
BLAST of NO21G01540 vs. NCBI_GenBank
Match: XP_009885991.1 (PREDICTED: pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 [Charadrius vociferus])

HSP 1 Score: 259.6 bits (662), Expect = 1.600e-65
Identity = 139/252 (55.16%), Postives = 173/252 (68.65%), Query Frame = 0
Query:  152 HFIAPTRIKR--DAIVVGGGHNGLVAAAYLAKQGLDVLVLERRHVVGGAAVTEELVNGFKFSRASYLAGLLRPQIITDLALEKHGFKYLPRDPSSFTPTGE---VGKYLMLGSNEEKNWQSIAQFSLRDADAFIEYERFLGQARELIEPLLDSSPPNPWD-GQAKWSERKHTFATLGKLLRLGWKSRGRLVSFYELFTAPATNLLDRWFESEVVKATLATDAVIGAMVGPKSPGSAYVLLHHVMGEEGGRKG 398
            H  A  R++R  DA+V+G GHNGLVAAAYL + G+   VLE+RHV+GGAAVTEE+V GFKFSRASYL  LLRPQI T+L L++HG + LPRDP SFTP  E     + L+LG +  K  Q IAQFS +DA A+ EYE F+G     ++PLLD+ P +    GQ    +R      L  L++ G     +L  +YE+ TAP + +LD+WFESE +KATLATDAVIGAM  P SPGS YVLLHHVMGE  G+KG
Sbjct:   34 HATAADRLQREYDAVVIGAGHNGLVAAAYLQRAGVRTAVLEKRHVLGGAAVTEEIVPGFKFSRASYLLSLLRPQIYTELELQRHGLRVLPRDPYSFTPLLEDRSPPRSLLLGHDMAKTQQQIAQFSQKDAQAYPEYEAFMGGLVSALDPLLDAPPVDTAALGQGSLLQRLRALKALRPLMQAGLVLGRQLPRYYEVLTAPISKILDQWFESEPLKATLATDAVIGAMASPHSPGSGYVLLHHVMGELEGQKG 285          
BLAST of NO21G01540 vs. NCBI_GenBank
Match: XP_005144161.2 (PREDICTED: pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 [Melopsittacus undulatus])

HSP 1 Score: 259.2 bits (661), Expect = 2.100e-65
Identity = 136/240 (56.67%), Postives = 169/240 (70.42%), Query Frame = 0
Query:  162 DAIVVGGGHNGLVAAAYLAKQGLDVLVLERRHVVGGAAVTEELVNGFKFSRASYLAGLLRPQIITDLALEKHGFKYLPRDPSSFTPTGE---VGKYLMLGSNEEKNWQSIAQFSLRDADAFIEYERFLGQARELIEPLLDSSPPNPWD-GQAKWSERKHTFATLGKLLRLGWKSRGRLVSFYELFTAPATNLLDRWFESEVVKATLATDAVIGAMVGPKSPGSAYVLLHHVMGEEGGRKG 398
            DA+V+G GHNGLVAAAYL + GL   VLE+RHV+GGAAVTEE+V GFKFSRASYL  LLRPQI T+L L++HG + LPRDP SFTP  E     + L+LG+N  +  Q IAQFS +DA A+ EYE F+      ++PLLD++P +    GQ    +R     +L  LLR G     +L  +YE+ TAP + +LD+WFESE +KATLATDAVIGAM  P +PGS YVLLHHVMGE  GR+G
Sbjct:   46 DAVVIGAGHNGLVAAAYLQRAGLRTAVLEKRHVLGGAAVTEEIVPGFKFSRASYLLSLLRPQIYTELELQRHGLRVLPRDPYSFTPLLEDRSPPRSLLLGNNRAQTQQQIAQFSQKDAQAYPEYEAFMEGLVSALDPLLDAAPVDTAALGQGSLLQRLSALRSLQPLLRAGLALGRQLPRYYEVLTAPISKILDQWFESEPLKATLATDAVIGAMTSPHTPGSGYVLLHHVMGELEGRRG 285          
BLAST of NO21G01540 vs. NCBI_GenBank
Match: XP_006822710.1 (PREDICTED: pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2-like [Saccoglossus kowalevskii])

HSP 1 Score: 258.5 bits (659), Expect = 3.600e-65
Identity = 131/238 (55.04%), Postives = 169/238 (71.01%), Query Frame = 0
Query:  162 DAIVVGGGHNGLVAAAYLAKQGLDVLVLERRHVVGGAAVTEELVNGFKFSRASYLAGLLRPQIITDLALEKHGFKYLPRDPSSFTPTGE-VGKYLMLGSNEEKNWQSIAQFSLRDADAFIEYERFLGQARELIEPLLDSSPPN-PWDGQAKWSERKHTFATLGKLLRLGWKSRGRLVSFYELFTAPATNLLDRWFESEVVKATLATDAVIGAMVGPKSPGSAYVLLHHVMGEEGGRKG 398
            DA+++GGGHNGLV AAYL K GL  LVLERRH++GGAAVTEE++ GFKFSRASY+  LLRPQI  DL L+KHG K   R+  +FTP  +    YL+LG+++E+ +  IA+FS +DA A+  YE+ + +  E IEPLLD+ P + P   +  + ++  T  ++  L  LG K    + SFYEL T+P T +LD WFESE +KATLATDAVIGAM+ P +PGS YVLLHHVMGE  G KG
Sbjct:   41 DAVIIGGGHNGLVTAAYLQKNGLKTLVLERRHLIGGAAVTEEIIPGFKFSRASYVLSLLRPQIYKDLELKKHGLKVYLREQFAFTPVLDGKNSYLLLGNDKEETFNQIAKFSEKDAKAYFRYEKMISKIAESIEPLLDNPPVDIPRLTKGTFKQKLRTLPSIKALFSLGVKLSDDISSFYELITSPTTKILDHWFESEPLKATLATDAVIGAMLSPTTPGSGYVLLHHVMGEIEGIKG 278          
BLAST of NO21G01540 vs. NCBI_GenBank
Match: XP_005048520.1 (PREDICTED: pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 [Ficedula albicollis])

HSP 1 Score: 258.1 bits (658), Expect = 4.700e-65
Identity = 139/252 (55.16%), Postives = 173/252 (68.65%), Query Frame = 0
Query:  152 HFIAPTRIKR--DAIVVGGGHNGLVAAAYLAKQGLDVLVLERRHVVGGAAVTEELVNGFKFSRASYLAGLLRPQIITDLALEKHGFKYLPRDPSSFTPTGE---VGKYLMLGSNEEKNWQSIAQFSLRDADAFIEYERFLGQARELIEPLLDSSPPNPWD-GQAKWSERKHTFATLGKLLRLGWKSRGRLVSFYELFTAPATNLLDRWFESEVVKATLATDAVIGAMVGPKSPGSAYVLLHHVMGEEGGRKG 398
            H  A  R++R  DA+V+G GHNGLVAAAYL + GL   VLERRHV+GGAAVTEE+V GFKFSRASYL  LLRPQI  DL L++HG + LPRDP SFTP  E     + L+LG +  +  Q IAQFS +DA A+ EYE F+G+    ++PLLD+ P +    G+    ++     TL  LL+ G     +L  +YE+ TAP + +LD WFESE +KATLATDAVIGAM  P +PGS YVLLHHVMGE  GR+G
Sbjct:   41 HAGAAARLQREYDAVVIGAGHNGLVAAAYLQRAGLRTAVLERRHVLGGAAVTEEIVPGFKFSRASYLLSLLRPQIYADLELQRHGLRVLPRDPYSFTPLLEDRSPPRSLLLGHDMAQTQQQIAQFSQKDAQAYPEYEAFMGRMVLALDPLLDAPPVDTAALGKGSLLQQLRNLRTLKPLLQAGLALGRQLPHYYEVLTAPISKILDHWFESEPLKATLATDAVIGAMASPHTPGSGYVLLHHVMGELEGRRG 292          
BLAST of NO21G01540 vs. NCBI_GenBank
Match: KQK77291.1 (pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 [Amazona aestiva])

HSP 1 Score: 257.7 bits (657), Expect = 6.200e-65
Identity = 139/252 (55.16%), Postives = 173/252 (68.65%), Query Frame = 0
Query:  152 HFIAPTRIKR--DAIVVGGGHNGLVAAAYLAKQGLDVLVLERRHVVGGAAVTEELVNGFKFSRASYLAGLLRPQIITDLALEKHGFKYLPRDPSSFTPTGE---VGKYLMLGSNEEKNWQSIAQFSLRDADAFIEYERFLGQARELIEPLLDSSPPNPWD-GQAKWSERKHTFATLGKLLRLGWKSRGRLVSFYELFTAPATNLLDRWFESEVVKATLATDAVIGAMVGPKSPGSAYVLLHHVMGEEGGRKG 398
            H  A  R++R  DA+V+G GHNGLVAAAYL   GL   VLE+RHV+GGAAVTEE+V GFKFSRASYL  LLRPQI T+L L++HG + LPRDP SFTP  E     + L+LG+N  +  Q IAQFS +DA  + EYE F+      ++PLLD++P +    GQ    +R     +L  LLR G     +L  +YE+ TAP + +LD+WFESE +KATLATDAVIGAM  P +PGS YVLLHHVMGE  GR+G
Sbjct:   41 HAGAADRLQREYDAVVIGAGHNGLVAAAYLQXAGLRTAVLEKRHVLGGAAVTEEIVPGFKFSRASYLLSLLRPQIYTELELQRHGLRVLPRDPYSFTPLLEDRSPPRSLLLGNNMAQTQQQIAQFSQKDAQVYPEYEAFMEGLVSALDPLLDAAPVDTAALGQGSLLQRLSALRSLWPLLRAGLALGRQLPRYYEVLTAPISKILDQWFESEPLKATLATDAVIGAMASPHTPGSGYVLLHHVMGELEGRRG 292          
BLAST of NO21G01540 vs. NCBI_GenBank
Match: XP_010185421.1 (PREDICTED: pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2, partial [Mesitornis unicolor])

HSP 1 Score: 256.9 bits (655), Expect = 1.100e-64
Identity = 137/252 (54.37%), Postives = 175/252 (69.44%), Query Frame = 0
Query:  152 HFIAPTRIKR--DAIVVGGGHNGLVAAAYLAKQGLDVLVLERRHVVGGAAVTEELVNGFKFSRASYLAGLLRPQIITDLALEKHGFKYLPRDPSSFTPTGE---VGKYLMLGSNEEKNWQSIAQFSLRDADAFIEYERFLGQARELIEPLLDSSPPNPWD-GQAKWSERKHTFATLGKLLRLGWKSRGRLVSFYELFTAPATNLLDRWFESEVVKATLATDAVIGAMVGPKSPGSAYVLLHHVMGEEGGRKG 398
            H  A  R++R  DA+V+G GHNGLVAAAYL + G+   VLE+RHV+GGAAVTEE++ GFKFSRASYL  LLRPQI T+L L++HG K LPRDP SFTP  E   + + L+LG N  +  Q IAQFS +DA A+ EYE F+G+    ++ LLD+SP +    GQ    +R      L  LL+ G     +L  +YE+ TAP + +LD+WFESE +KATLATDAVIGAM  P +PGS YVLLHHVMG+  G++G
Sbjct:   26 HVGAAERLQREYDAVVIGAGHNGLVAAAYLQQAGVRTAVLEKRHVLGGAAVTEEIIPGFKFSRASYLLSLLRPQIYTELELQQHGLKVLPRDPYSFTPLLEDRSLPRSLLLGHNMAQTQQQIAQFSQKDAQAYPEYEAFMGRLVSALDLLLDASPVDTAALGQGSLLQRLRALRDLRPLLQAGLMLGQKLPRYYEVLTAPISKVLDQWFESEPLKATLATDAVIGAMASPHTPGSGYVLLHHVMGQLEGQRG 277          
The following BLAST results are available for this feature:
BLAST of NO21G01540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22644.13.300e-11177.65pyridine nucleotide-disulfide oxidoreductase domai... [more]
XP_004991850.11.400e-6958.47FAD dependent oxidoreductase [Salpingoeca rosetta]... [more]
XP_018417950.12.500e-6653.82PREDICTED: pyridine nucleotide-disulfide oxidoredu... [more]
XP_009464521.19.500e-6657.08PREDICTED: pyridine nucleotide-disulfide oxidoredu... [more]
XP_009885991.11.600e-6555.16PREDICTED: pyridine nucleotide-disulfide oxidoredu... [more]
XP_005144161.22.100e-6556.67PREDICTED: pyridine nucleotide-disulfide oxidoredu... [more]
XP_006822710.13.600e-6555.04PREDICTED: pyridine nucleotide-disulfide oxidoredu... [more]
XP_005048520.14.700e-6555.16PREDICTED: pyridine nucleotide-disulfide oxidoredu... [more]
KQK77291.16.200e-6555.16pyridine nucleotide-disulfide oxidoreductase domai... [more]
XP_010185421.11.100e-6454.37PREDICTED: pyridine nucleotide-disulfide oxidoredu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL026nonsL026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL025nonsL025Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR040ncniR040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR060ngnoR060Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004632NSK004632Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G01540.1NO21G01540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO21G01540.2NO21G01540.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO21G01540.3NO21G01540.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602533gene_8113Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100023g33gene7789Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G01540.1NO21G01540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO21G01540.2NO21G01540.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO21G01540.3NO21G01540.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G01540 ID=NO21G01540|Name=NO21G01540|organism=Nannochloropsis oceanica|type=gene|length=3852bp
ATGATGACAAGGAAGAGGAGGGAGGCAGCAGAGTGGATTGAGGCAACGCC
ACAGCGGCCACGCCCACGCATGCCCTTTCCCCTATGCCTTTTAAGAGCTG
TGTATGCAGAGgtaaatgtgcctttgctgtgtgaagggcatgagggtgat
gctcgagcggcagccccccccattcttctttcttgatcccctcctcacca
cacagCGAGAGAATGGAGTAGGACGTGCCCTTCCAGGCATCACAGGATCT
CCCAGTACGCACATCAGTTTAGCCTTGCAAGGCATTGAGGCCCTAGAGgt
gagtgctacgcgtagcgtggatcagcaggaggaagagagggatgaccagg
ggagcgatggacgagaggcggcgaggggtggctgtggttgggcagattat
gaccggacgcgaaccccgcgatggccagcttttgattgccctgcctcacg
cactgcatcgaaatcatggcggcttccttttttcattacattcatccaat
ccacccaacagCACACCATGCCATGGTCGGCAGGAGCAGAAACAGCAATC
ACTGCGACGACCCATTTCATCCGCCGCTCTCGCATCCTCTCAACACCCTC
TGTGCTCTCGACCACAAGATGCGGCTGCTGCGTTAGCTTCGCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGCCCTCA
TCTTCATCTTCCTCTTCCTCCCCGCTTCCTCTCAGCCGCAAGTACCTTGC
CTCCCCCTACCACTTCATCGCTCCTACCCGCATCAAACGCGACGCCATCG
TCGTCGGTGGGGGCCACAACGGTCTAGTCGCCGCTGCCTACCTCGCAAAA
CAAGGTCTTGATGTCCTTGTCCTGGAACGTCGTCATGTGGTGGGCGGGGC
AGCAGTCACAGAGGAGCTGGTCAATGGATTCAAATTCAGCAGAGCTTCGT
ACCTGGCTGGGTTGCTCCGCCCTCAGATTATTACTGATCTAGCGCTTGAG
AAACATGGCTTTAAATACCTACCAAGGGACCCTTCCTCGTTCACTCCTAC
AGGTGAAGTTGGAAAGTATTTGATGTTGGGGAGTAATGAGgtagggcgtg
gagggagagtgggcaaaagggacggaagggttaattgttaagtcgtaatt
ttgcccatgccaatctacttacttctcactgtcccggtcgtagtaattat
tcctcctctaaatgctgctccttacctttctccctatccctccccctcgc
ctcctcccatgcagGAGAAGAACTGGCAATCCATCGCTCAATTTTCTCTG
CGAGACGCTGATGCCTTCATCGAGTACGAAAGATTTCTGGGCCAAGCACG
TGAGTTAATCGAGCCGTTGCTCGATTCCTCTCCTCCTAACCCATGGGATG
GGCAAGCTAAGTGGAGCGAAAGGAAACATACCTTCGCCACCCTCGGAAAG
TTACTGAGGCTAGGATGGAAGAGTCGCGGAAGGCTCGTCTCTTTTTATGA
GCTTTTCACGGCCCCGGCAACCAATTTGTTGGACCGATGGTTTGAGAGCG
AGGTGGTTAAGGCGACGCTCGCGACAGATGCGGTTATCGGTGCGATGGTG
GGGCCCAAATCGCCAGGATCCGCATATGTGCTGTTGCACCATGTCATGGg
tgaagagggagggaggaagggcgggagggaagggcgcatacaagactcga
aaataccctgctattaatttggaaattattctcacttaccctaattcgtg
tttcattcatttcatttcttatttgttgtatgtgtttatttttatgtttt
acatccttcataatgctcttgtacttcgcttttccctaattctttgttca
ctattgacacagGAGAGGCAGCGGGACGGAAGGGCGTGTGGGCTTATGTT
GAAGGAGGGATGGGTGCCGTTAGTCACAGCATCGCCAAGGCAGCCAAGGC
GTGGGGGGCAGAGATAGTGACCAGCGCGCAGGTGCAACAGTTTGTGTATA
GTGAAGGGTTGGGGCGAGTGACGGGCGTGGAGATGGCGTGTGGGACACGg
taagcaagggaccaagggaccaagggaccaagggagaggagagggagagt
ggcatatgtgtatggtcacattcacaatggcagtcttccccctcgccata
gcgatgacatttgtttatcaaccctttcttctccctctcatacacagACT
AGAAGCCTCTGTCACCCTCTCAAGCGGCACCCCTTACCACACATTTGTCG
AGCTCTTCCCCCCTCCTCCCTCCCTCCCTCCTCCTCCTCGCCTCTGCCCC
CGGCTTTCCTCCAGCGCATTCGCCACACTGACTACGCCTCCGGGGTCTTC
AAAATTAATTTGGCATTGGAGCGCCTTCCTGACTTCACCTGCTGCCCCTC
CTCTGCTTCGAACGAGGCAGGTCCCCAGCATCGGGGCACTATCCACTTTG
AAGAAAGAGTTCAAGAGATAGAAGATGCTTATTTGGAGGCTCATGCCCAC
CGTCGTCCTAGCTCTCGACCAGTGATTGAGATGACGCTACCTTCCTCCTT
GGACACCACATTAGCTCCACCGGGCAAGCATGTCGCATCGTTGTTCGTCC
AGTATGCGCCCTATGACCTCGATCCGAAAGTGGGAAGCTGGGAGGATGAG
GGATTCAAGAATGCATTCGCTGATCGTGTATTTAGAATTATCGACGAGAG
GGCTCCACACTTTTCCTCGTCGATTTTGGGGAGAGATCTATTGTCACCTT
TAGATCTGGAAAGAGTGTTTGGATTACGTGGAGGGAATATATTTCATGGT
AGCTTGGGCTTGCATCAATTGGCGTACGCGCGGCCGGGATACCGCACTCC
GCTGCCTGGTCTATATTTGTGTGGGGCAGGCACGCATCCCGGGGGAGGGG
TGATGGGTGCTCCTGGTAGGAACTGTGCGCGTGTGGTTTTAAGTGACTTA
CAGCGATAATTTGAGGTGAGGTAGGATAAGGTATGGATGTTAAAAAACGA
AAGAAAAGGTAAGAGGGTTTGTTGGAAAGAAAGGAACAAAATCATAGAGA
GCTTAGTATAGAGAGCCTGATGCCAAGAAGAACATCAGGACAATGAGAGG
CCTCTTCGGCCACCTCCAGAAGCATAGACGAAATGATCAAACAGTTCATA
CGGTGTGAAAGAAAGGGGAGAGAGTCAGTATAGATTTACAAAAGGAATTG
ACCATTGCCGTAAGCATGTCCAAAGAAAGAGAAAGAATGAAGGTCTTCAA
GTTCTTTTTTTCTGCCGCTCCTACACTCCTGTAGAACTATCTCATGCAAC
CTGACGTCCCAGTAGGACTTGCATACGAGGGGGGGCCTTCCAACGAGAAA
TTGTTGCATATTCATCCCTTATTTCCTTGTCCGAGTTTTTCTAGCGACTT
TGACAGGTTTTTTTATCAGGCAAAGTCCCCGGACGGCCCACACAGGGCCA
GGAGGAGGGGGGGAAGGAGGATAAAAGAGGAGGTCAGCGGGAAGGCTACA
CATAGAGTGTCCGCATATCTTGCCGCGGTTGACCAAACCGAAGATCATGG
GGACGAGCTTACCCACGGACCATGCTCCTGTACACCCGCAGGATGTTACG
TGCCCCATTGCCGTCCCGGGACACGAACTGTTCACAGGTGTCACACCAAC
AAAGTCCTCGGATGGCCCGCTCATGACCTCCTCCTCTGCCTCGTCCTCGT
CCTCCTCCGCCTCCTCCTCCGTCTCCTCCGCCTCCGCCTCCTCCTCCTCC
TCTGCTTCCACCGCCTCCGCCCCCTCCTCCTCCTCCTTCTCCTCCTTCAC
CTCCTTCTCCTTCTGCCTTTCCCTTCCTCCTCCTCCTCCTCCTCCACCTT
CT
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protein sequence of NO21G01540.1

>NO21G01540.1-protein ID=NO21G01540.1-protein|Name=NO21G01540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=543bp
MMTRKRREAAEWIEATPQRPRPRMPFPLCLLRAVYAERENGVGRALPGIT
GSPSTHISLALQGIEALEHTMPWSAGAETAITATTHFIRRSRILSTPSVL
STTRCGCCVSFASSSSSSSSSSSSSSSSSPSSSSSSSSPLPLSRKYLASP
YHFIAPTRIKRDAIVVGGGHNGLVAAAYLAKQGLDVLVLERRHVVGGAAV
TEELVNGFKFSRASYLAGLLRPQIITDLALEKHGFKYLPRDPSSFTPTGE
VGKYLMLGSNEEKNWQSIAQFSLRDADAFIEYERFLGQARELIEPLLDSS
PPNPWDGQAKWSERKHTFATLGKLLRLGWKSRGRLVSFYELFTAPATNLL
DRWFESEVVKATLATDAVIGAMVGPKSPGSAYVLLHHVMGEAAGRKGVWA
YVEGGMGAVSHSIAKAAKAWGAEIVTSAQVQQFVYSEGLGRVTGVEMACG
TRLEASVTLSSGTPYHTFVELFPPPPSLPPPPRLCPRLSSSAFATLTTPP
GSSKLIWHWSAFLTSPAAPPLLRTRQVPSIGALSTLKKEFKR*
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protein sequence of NO21G01540.2

>NO21G01540.2-protein ID=NO21G01540.2-protein|Name=NO21G01540.2|organism=Nannochloropsis oceanica|type=polypeptide|length=412bp
MMTRKRREAAEWIEATPQRPRPRMPFPLCLLRAVYAERENGVGRALPGIT
GSPSTHISLALQGIEALEHTMPWSAGAETAITATTHFIRRSRILSTPSVL
STTRCGCCVSFASSSSSSSSSSSSSSSSSPSSSSSSSSPLPLSRKYLASP
YHFIAPTRIKRDAIVVGGGHNGLVAAAYLAKQGLDVLVLERRHVVGGAAV
TEELVNGFKFSRASYLAGLLRPQIITDLALEKHGFKYLPRDPSSFTPTGE
VGKYLMLGSNEEKNWQSIAQFSLRDADAFIEYERFLGQARELIEPLLDSS
PPNPWDGQAKWSERKHTFATLGKLLRLGWKSRGRLVSFYELFTAPATNLL
DRWFESEVVKATLATDAVIGAMVGPKSPGSAYVLLHHVMGEEGGRKGGRE
GRIQDSKIPCY*
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protein sequence of NO21G01540.3

>NO21G01540.3-protein ID=NO21G01540.3-protein|Name=NO21G01540.3|organism=Nannochloropsis oceanica|type=polypeptide|length=412bp
MMTRKRREAAEWIEATPQRPRPRMPFPLCLLRAVYAERENGVGRALPGIT
GSPSTHISLALQGIEALEHTMPWSAGAETAITATTHFIRRSRILSTPSVL
STTRCGCCVSFASSSSSSSSSSSSSSSSSPSSSSSSSSPLPLSRKYLASP
YHFIAPTRIKRDAIVVGGGHNGLVAAAYLAKQGLDVLVLERRHVVGGAAV
TEELVNGFKFSRASYLAGLLRPQIITDLALEKHGFKYLPRDPSSFTPTGE
VGKYLMLGSNEEKNWQSIAQFSLRDADAFIEYERFLGQARELIEPLLDSS
PPNPWDGQAKWSERKHTFATLGKLLRLGWKSRGRLVSFYELFTAPATNLL
DRWFESEVVKATLATDAVIGAMVGPKSPGSAYVLLHHVMGEEGGRKGGRE
GRIQDSKIPCY*
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Synonyms
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