NO21G01520, NO21G01520 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G01520 vs. NCBI_GenBank
Match: EWM22640.1 (peptidyl-trna hydrolase mitochondrial-like protein [Nannochloropsis gaditana]) HSP 1 Score: 233.8 bits (595), Expect = 4.700e-58 Identity = 119/165 (72.12%), Postives = 133/165 (80.61%), Query Frame = 0 Query: 39 LIPTVQAAFAPPASSRSFRLTPRCDMPRSGLTIPHDRLDFSYSKSSGPGGQNVNKLNTRVELRFHVESAEWIPQGMRGRLLEQQRHRVNKAGELVLSSQEHRTQLKNREDCLSKLEEALARAAIVPKTRNMRVGLQEWEKENRLREKKKRSETKSARRQNRKWDE 204 ++P+ QA+ P A R FR+ P C+MPR+G IPHDRLDFSYS+SSGPGGQNVNKLNTRVELRFHVE A+WIP+ MR R LEQQRHRVNK GE VLSSQEHRTQLKNRE+C+ KLEEAL RAA+VPK RNMR GL EWEKENRLREK RR+N KWDE Sbjct: 52 VLPSGQASSLPDA--RQFRVAPYCEMPRNGFEIPHDRLDFSYSRSSGPGGQNVNKLNTRVELRFHVEDADWIPEDMRHRFLEQQRHRVNKLGEFVLSSQEHRTQLKNREECVRKLEEALTRAAVVPKRRNMRTGLTEWEKENRLREKXXXXXXXXXRRRNGKWDE 214
BLAST of NO21G01520 vs. NCBI_GenBank
Match: XP_002290413.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED92165.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 124.4 bits (311), Expect = 4.000e-25 Identity = 65/128 (50.78%), Postives = 90/128 (70.31%), Query Frame = 0 Query: 69 LTIPHDRLDFSYSKSSGPGGQNVNKLNTRVELRFHVESAEWIPQGMRGRLLEQQRHRVNKAGELVLSSQEHRTQLKNREDCLSKLEEALARAAIVPKTRNMRVGLQEWEKENRLREKKKRSETKSARR 197 +TIP D++ S+++SSG GGQNVNK+ T+VELRFH++SA WIP +R RL + +R+N G + ++SQE+RTQ++NR+D L KLE+ L + PK R MR GL KENR KKK S+ K+ RR Sbjct: 1 ITIPEDQIQTSFARSSGAGGQNVNKVETKVELRFHLDSASWIPAEVRERLKTNEANRINNDGFMSVNSQEYRTQVQNRKDALKKLEDILRNSWARPKVRKMRKGLSAKTKENRREMKKKISQKKANRR 128
BLAST of NO21G01520 vs. NCBI_GenBank
Match: XP_024120766.1 (peptidyl-tRNA hydrolase ICT1, mitochondrial [Oryzias melastigma]) HSP 1 Score: 117.9 bits (294), Expect = 3.800e-23 Identity = 61/131 (46.56%), Postives = 92/131 (70.23%), Query Frame = 0 Query: 71 IPHDRLDFSYSKSSGPGGQNVNKLNTRVELRFHVESAEWIPQGMRGRLLEQQRHRVNKAGELVLSSQEHRTQLKNREDCLSKLEEALARAAIVPKTRN-----MRVGLQEWEKENRLREKKKRSETKSARR 197 +P +RL +YS+SSGPGGQ+VNK+NT+ E+RFHV +A+WIP+ +R +++EQ R+R+NKAGEL++SS+ R+Q +N DCL K+ +A A+ P +R + KE RL++KK S+TK +RR Sbjct: 48 VPTERLTVTYSRSSGPGGQHVNKVNTKAEVRFHVHTADWIPEDIRQKVIEQNRNRMNKAGELLVSSELSRSQHRNLSDCLQKISAIIAEASEKPPEPTEEDIALRAARLKKRKEERLKQKKIHSQTKLSRR 178
BLAST of NO21G01520 vs. NCBI_GenBank
Match: XP_015211436.1 (PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X1 [Lepisosteus oculatus]) HSP 1 Score: 117.1 bits (292), Expect = 6.500e-23 Identity = 57/131 (43.51%), Postives = 96/131 (73.28%), Query Frame = 0 Query: 71 IPHDRLDFSYSKSSGPGGQNVNKLNTRVELRFHVESAEWIPQGMRGRLLEQQRHRVNKAGELVLSSQEHRTQLKNREDCLSKLEEALARAAIVPK-----TRNMRVGLQEWEKENRLREKKKRSETKSARR 197 IP DRL +YS+SSGPGGQ+VNK+NT+ E+RFHV++A+WIP+ +R +++ + ++R+NK+GEL+++S+ R Q++N DCL K+ + +A A++ PK + +R E +++RL++KK S+ K +RR Sbjct: 77 IPLDRLTVTYSRSSGPGGQHVNKVNTKAEIRFHVQTADWIPEDVRQKIILKNKNRINKSGELIVTSEASRYQMRNLADCLQKIGDIIAEASLKPKEPSEEDKALRKTRLEKMQQDRLKQKKMHSDLKQSRR 207
BLAST of NO21G01520 vs. NCBI_GenBank
Match: XP_015211437.1 (PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X2 [Lepisosteus oculatus]) HSP 1 Score: 117.1 bits (292), Expect = 6.500e-23 Identity = 57/131 (43.51%), Postives = 96/131 (73.28%), Query Frame = 0 Query: 71 IPHDRLDFSYSKSSGPGGQNVNKLNTRVELRFHVESAEWIPQGMRGRLLEQQRHRVNKAGELVLSSQEHRTQLKNREDCLSKLEEALARAAIVPK-----TRNMRVGLQEWEKENRLREKKKRSETKSARR 197 IP DRL +YS+SSGPGGQ+VNK+NT+ E+RFHV++A+WIP+ +R +++ + ++R+NK+GEL+++S+ R Q++N DCL K+ + +A A++ PK + +R E +++RL++KK S+ K +RR Sbjct: 72 IPLDRLTVTYSRSSGPGGQHVNKVNTKAEIRFHVQTADWIPEDVRQKIILKNKNRINKSGELIVTSEASRYQMRNLADCLQKIGDIIAEASLKPKEPSEEDKALRKTRLEKMQQDRLKQKKMHSDLKQSRR 202
BLAST of NO21G01520 vs. NCBI_GenBank
Match: XP_015819230.1 (PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Nothobranchius furzeri]) HSP 1 Score: 116.7 bits (291), Expect = 8.400e-23 Identity = 58/134 (43.28%), Postives = 92/134 (68.66%), Query Frame = 0 Query: 67 SGLTIPHDRLDFSYSKSSGPGGQNVNKLNTRVELRFHVESAEWIPQGMRGRLLEQQRHRVNKAGELVLSSQEHRTQLKNREDCLSKLEEALARAAIVPKTRN-----MRVGLQEWEKENRLREKKKRSETKSAR 196 +G+ +P DRL SYS+SSGPGGQ+VNK++T+ E+RFHV +A+WIP +R ++LE+ ++R+NKAGEL+++S+ R+Q +N DC+ K+ +A A+ P+ +R E + RL+EK+ S TK +R Sbjct: 56 TGIQVPVDRLTVSYSRSSGPGGQHVNKVSTKAEVRFHVHTADWIPHDVRQKILEKNKNRINKAGELLVTSETSRSQQRNLSDCIQKISSIIAEASEKPREATAEESAVRAARLEKRNKERLKEKRIHSATKHSR 189
BLAST of NO21G01520 vs. NCBI_GenBank
Match: GAX26754.1 (peptidyl-tRNA hydrolase ICT1 [Fistulifera solaris]) HSP 1 Score: 116.3 bits (290), Expect = 1.100e-22 Identity = 60/129 (46.51%), Postives = 89/129 (68.99%), Query Frame = 0 Query: 69 LTIPHDRLDFSYSKSSGPGGQNVNKLNTRVELRFHVESAEWIPQGMRGRLLEQQRHRVNKAGELVLSSQEHRTQLKNREDCLSKLEEALARAAIVPKTRNMRVGLQEWEKENRLREKKKRSETKSARRQ 198 + IP + LDFS+ +SSG GGQNVNK+N++V++R +V A WIP +R RLL+QQ +R++K G L +++QEHRTQ+ NR+ + KL+ L +A PK R MR G+ KE R K++RS+ K R++ Sbjct: 96 IDIPEENLDFSFVRSSGAGGQNVNKVNSQVQVRLNVHEAYWIPYEVRQRLLQQQANRISKEGVLTIAAQEHRTQVANRKAAVQKLQNMLLQAWPRPKERRMRQGISIKTKEQRKEFKRRRSDVKEGRKK 224
BLAST of NO21G01520 vs. NCBI_GenBank
Match: XP_015759587.1 (PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like [Acropora digitifera]) HSP 1 Score: 115.9 bits (289), Expect = 1.400e-22 Identity = 61/131 (46.56%), Postives = 95/131 (72.52%), Query Frame = 0 Query: 71 IPHDRLDFSYSKSSGPGGQNVNKLNTRVELRFHVESAEWIPQGMRGRLLEQQRHRVNKAGELVLSSQEHRTQLKNREDCLSKLEEALARAAIVPKTRNM--RVGLQEW---EKENRLREKKKRSETKSARR 197 IP + Y+KSSGPGGQNVNK+NT+V+LRFHV SAEW+ + +R ++L+++++R+NK GELV+SS ++RTQ KN +D ++K+E + A++VPK ++ + +Q+ E ENRLR KK ++ K R+ Sbjct: 62 IPLESFTIKYAKSSGPGGQNVNKVNTKVDLRFHVASAEWLSEHVRQKILQREKNRINKEGELVISSTKYRTQYKNLKDAVNKVEMIIDEASVVPKETSVEKKAHVQKMINKENENRLRAKKLLADKKRDRK 192
BLAST of NO21G01520 vs. NCBI_GenBank
Match: GAX25012.1 (peptidyl-tRNA hydrolase ICT1 [Fistulifera solaris]) HSP 1 Score: 115.9 bits (289), Expect = 1.400e-22 Identity = 59/129 (45.74%), Postives = 90/129 (69.77%), Query Frame = 0 Query: 69 LTIPHDRLDFSYSKSSGPGGQNVNKLNTRVELRFHVESAEWIPQGMRGRLLEQQRHRVNKAGELVLSSQEHRTQLKNREDCLSKLEEALARAAIVPKTRNMRVGLQEWEKENRLREKKKRSETKSARRQ 198 + IP + LDFS+ +SSG GGQNVNK+N++V+LR +V A WIP +R RL++QQ +R++K G L +++QEHRTQ+ NR+ + KL + L +A PK R +R G+ KE R K++RS+ K+ R++ Sbjct: 97 IDIPEENLDFSFVRSSGAGGQNVNKVNSQVQLRLNVNEAYWIPYEVRQRLMQQQANRISKEGVLTIAAQEHRTQVANRKAAIQKLRDMLLQAWPRPKERRIRQGISIKTKEQRKEFKRRRSDVKAGRKK 225
BLAST of NO21G01520 vs. NCBI_GenBank
Match: XP_020914234.1 (peptidyl-tRNA hydrolase ICT1, mitochondrial-like [Exaiptasia pallida] >KXJ22734.1 Peptidyl-tRNA hydrolase ICT1, mitochondrial [Exaiptasia pallida]) HSP 1 Score: 115.5 bits (288), Expect = 1.900e-22 Identity = 63/133 (47.37%), Postives = 92/133 (69.17%), Query Frame = 0 Query: 71 IPHDRLDFSYSKSSGPGGQNVNKLNTRVELRFHVESAEWIPQGMRGRLLEQQRHRVNKAGELVLSSQEHRTQLKNREDCLSKLEEALARAAIVPKTRNMRVG-----LQEWEKENRLREKKKRSETKSARRQN 199 +P DRL +++SSGPGGQNVNK+NT+VE+RFHVESA+WIP+ +R +LL+++R+RVNK GELVL+S + R+QLKN +D +S+L+ + A+ VP + + L E RL KK S+ K R+ + Sbjct: 54 VPQDRLTIKFARSSGPGGQNVNKVNTKVEIRFHVESADWIPEEVREKLLKRERNRVNKNGELVLTSTQFRSQLKNVKDAISRLQTIIKDASFVPAGPSQQQQDHIKILARNFNERRLATKKFASQKKXGRKSD 186 The following BLAST results are available for this feature:
BLAST of NO21G01520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G01520 ID=NO21G01520|Name=NO21G01520|organism=Nannochloropsis oceanica|type=gene|length=612bpback to top protein sequence of NO21G01520.1 >NO21G01520.1-protein ID=NO21G01520.1-protein|Name=NO21G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=204bpback to top Synonyms
Publications
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