NO21G01360, NO21G01360 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G01360 vs. NCBI_GenBank
Match: EWM22657.1 (CBF1-interacting co-repressor CIR, N-terminal domain protein [Nannochloropsis gaditana]) HSP 1 Score: 270.4 bits (690), Expect = 1.400e-68 Identity = 141/171 (82.46%), Postives = 155/171 (90.64%), Query Frame = 0 Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMDEFRKQIAXXXXXXXLKELQVSAGLVDKDQIAKLDWMYEGPMATMADHQQDTEQYLLGKEVQVKKEESEVQRVESQPGMLFLNSVSAKNDMFTRLHEDPLLMIKQNEIRKRDDIVKNPIKMARIRQQLEEELARK 172 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRM XXX LKELQVSAGLVDK+Q AKLDWMYEGPMATM DHQQDTEQYLLGKEV VK+++SEV+RVE+QPGML+LNSVSAKND+FTRLHEDPLL+IKQNE++KR+D+VKNP+KMARIRQQLE ELARK Sbjct: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMXXXXXXXXXXXQLQELKELQVSAGLVDKNQTAKLDWMYEGPMATMQDHQQDTEQYLLGKEVTVKEQDSEVKRVENQPGMLYLNSVSAKNDLFTRLHEDPLLLIKQNELKKREDVVKNPVKMARIRQQLEAELARK 171 HSP 2 Score: 89.7 bits (221), Expect = 3.400e-14 Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 0 Query: 563 GLTVESRRGGEEEVKPEFLQKMGAQVYMGGEETLVERIDRLKHTRQRNRGGEAGFL 619 G T E+ RG E +PEFLQK+G QVYMGG+ETL ER+DRL+HTRQRNRGGEAGFL Sbjct: 345 GTTAENGRGSRREDRPEFLQKLGVQVYMGGDETLEERMDRLRHTRQRNRGGEAGFL 400
BLAST of NO21G01360 vs. NCBI_GenBank
Match: XP_012197177.1 (hypothetical protein SPRG_03197 [Saprolegnia parasitica CBS 223.65] >KDO31981.1 hypothetical protein SPRG_03197 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 133.7 bits (335), Expect = 2.000e-27 Identity = 80/172 (46.51%), Postives = 118/172 (68.60%), Query Frame = 0 Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMDEFRKQIAXXXXXXXLKELQVSAGLVDKDQIAKLDWMYEGPMATMADHQQDTEQYLLGKEVQVKKEESEVQRVESQPGMLFLNSV-SAKNDMFTRLHEDPLLMIKQNEIRKRDDIVKNPIKMARIRQQLEEELARK 172 MSL FLAKK+W+ +NLKNVEKVWKAEQK A EE ++ E XXXXXXX +Q DQ ++DWMYEGPMA + ++ E YLLGKE EE++++++ +QPG L++++ SA ND F+RL+EDP++MIK+ + + ++KNP KM ++ ++E+EL+ + Sbjct: 1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEENKLLELXXXXXXXXXXXXXXXMQAKMSGGKVDQTQRVDWMYEGPMAA-SQTERTAEDYLLGKEYTPAPEENQLKQLAAQPGSLYMSAAPSAVNDTFSRLNEDPMMMIKRQQKAAQLAVLKNPAKMKHLKDKVEQELSER 171
BLAST of NO21G01360 vs. NCBI_GenBank
Match: XP_008606822.1 (hypothetical protein SDRG_02986 [Saprolegnia diclina VS20] >EQC39550.1 hypothetical protein SDRG_02986 [Saprolegnia diclina VS20]) HSP 1 Score: 133.3 bits (334), Expect = 2.600e-27 Identity = 79/172 (45.93%), Postives = 119/172 (69.19%), Query Frame = 0 Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMDEFRKQIAXXXXXXXLKELQVSAGLVDKDQIAKLDWMYEGPMATMADHQQDTEQYLLGKEVQVKKEESEVQRVESQPGMLFLNSV-SAKNDMFTRLHEDPLLMIKQNEIRKRDDIVKNPIKMARIRQQLEEELARK 172 MSL FLAKK+W+ +NLKNVEKVWKAEQK A EE ++ E XXXXXXX +Q DQ ++DWMY+GPMA + ++ E YLLGKE + EE++++++ +QPG L++++ SA ND F+RL+EDP++MIK+ + + ++KNP KM ++ ++E+EL+ + Sbjct: 1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEENKLLELXXXXXXXXXXXXXXXMQAKMSGGKVDQTQRVDWMYDGPMAA-SQTERTAEDYLLGKEYKPAPEENQLKQLAAQPGSLYMSAAPSAVNDSFSRLNEDPMMMIKRQQKAAQLAVLKNPAKMKHLKDKVEQELSER 171
BLAST of NO21G01360 vs. NCBI_GenBank
Match: OQR81653.1 (pre-mRNA-splicing factor CWC25 [Thraustotheca clavata]) HSP 1 Score: 130.6 bits (327), Expect = 1.700e-26 Identity = 78/169 (46.15%), Postives = 118/169 (69.82%), Query Frame = 0 Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMDEFRKQIAXXXXXXXLKELQVSAGLVDKDQIAKLDWMYEGPMATMADHQQDTEQYLLGKEVQVKKEESEVQRVESQPGMLFLNSVSAK-NDMFTRLHEDPLLMIKQNEIRKRDDIVKNPIKMARIRQQLEEEL 169 MSL FLAKK+W+ +NLKNVEKVWKAEQK A EE+++ E XXXXXXX LQ +Q ++DWMYEGPMA + ++ E YLLGKE + + E++E++++ +PG L++ + ++K D F+RL+EDP++MIK+ + + ++KNP KM R++ ++E+EL Sbjct: 1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEEQKLLELXXXXXXXXXXXXXXXLQAKTTGDKVNQTQRVDWMYEGPMAA-SQAERTAEDYLLGKEYKPEAEKNELKQLSERPGSLYMGNATSKITDTFSRLNEDPMMMIKRQQKAAQLAVLKNPAKMKRLKDKVEKEL 168
BLAST of NO21G01360 vs. NCBI_GenBank
Match: XP_009838769.1 (hypothetical protein H257_13050 [Aphanomyces astaci] >ETV71581.1 hypothetical protein H257_13050 [Aphanomyces astaci]) HSP 1 Score: 121.3 bits (303), Expect = 1.000e-23 Identity = 76/162 (46.91%), Postives = 105/162 (64.81%), Query Frame = 0 Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMDEFRKQIAXXXXXXXLKELQVSAGLVDKDQIAKLDWMYEGPMATMADHQQDTEQYLLGKEVQVKKEESEVQRVESQPGMLFLNS-VSAKNDMFTRLHEDPLLMIKQNEIRKRDDIVKNPIKMARIR 162 MSL FLAKK+W+ +NL NVEKVWKAEQKAA XXXXXXX Q A + ++DWMYEGPMA + ++ E+YLLGKE + K EES+++++ SQPG L++ S +D F+RL+EDP++ IK+ + + I+KNP+KM RI+ Sbjct: 1 MSLAFLAKKSWHTSNLSNVEKVWKAEQKAALXXXXXXXXXXXXXXXXXXXXXXXXQAKASGTKANTTERVDWMYEGPMAA-SQREKTAEEYLLGKEYEEKPEESDLKKLASQPGSLYMASGAGTASDSFSRLNEDPMMFIKKQQKATQLSIMKNPVKMKRIK 161
BLAST of NO21G01360 vs. NCBI_GenBank
Match: EFJ24728.1 (hypothetical protein SELMODRAFT_232333 [Selaginella moellendorffii]) HSP 1 Score: 120.2 bits (300), Expect = 2.300e-23 Identity = 66/164 (40.24%), Postives = 103/164 (62.80%), Query Frame = 0 Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMDEFRKQIAXXXXXXXLKELQVSAGLVDKDQIAKLDWMYEGPMATMADHQQDTEQYLLGKEVQVKKEESEVQRVESQPGMLFLNSVSAKNDMFTRLHEDPLLMIKQNEIRKRDDIVKNPIKMARIRQQL 165 M+LKFL KK W+ +L+N+E VWKAEQK E ++++E +KQI ++LQ AGLV K + +LD++YE + + E+YLLGK ++ K ES +Q+V + PG LF+ + ND + ++ DPLL+IKQ E+ R+ I NP+KM +R+++ Sbjct: 1 MALKFLNKKGWHTGSLRNIETVWKAEQKRDVENRKLEELQKQIKEEQEHLEFRKLQEQAGLVPKQE--RLDFLYESGLGV---GKPSNEEYLLGKPLEESKGESVIQQVAATPGSLFVEEKISANDQWRKIRSDPLLLIKQQELAARERIKNNPLKMEALRKEV 159
BLAST of NO21G01360 vs. NCBI_GenBank
Match: XP_024534967.1 (pre-mRNA-splicing factor CWC25 homolog [Selaginella moellendorffii]) HSP 1 Score: 120.2 bits (300), Expect = 2.300e-23 Identity = 66/164 (40.24%), Postives = 103/164 (62.80%), Query Frame = 0 Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMDEFRKQIAXXXXXXXLKELQVSAGLVDKDQIAKLDWMYEGPMATMADHQQDTEQYLLGKEVQVKKEESEVQRVESQPGMLFLNSVSAKNDMFTRLHEDPLLMIKQNEIRKRDDIVKNPIKMARIRQQL 165 M+LKFL KK W+ +L+N+E VWKAEQK E ++++E +KQI ++LQ AGLV K + +LD++YE + + E+YLLGK ++ K ES +Q+V + PG LF+ + ND + ++ DPLL+IKQ E+ R+ I NP+KM +R+++ Sbjct: 1 MALKFLNKKGWHTGSLRNIETVWKAEQKRDVENRKLEELQKQIKEEQEHLEFRKLQEQAGLVPKQE--RLDFLYESGLGV---GKPSNEEYLLGKPLEESKGESVIQQVAATPGSLFVEEKISANDQWRKIRSDPLLLIKQQELAARERIKNNPLKMEALRKEV 159
BLAST of NO21G01360 vs. NCBI_GenBank
Match: XP_002990790.2 (pre-mRNA-splicing factor CWC25 homolog [Selaginella moellendorffii]) HSP 1 Score: 120.2 bits (300), Expect = 2.300e-23 Identity = 66/164 (40.24%), Postives = 103/164 (62.80%), Query Frame = 0 Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMDEFRKQIAXXXXXXXLKELQVSAGLVDKDQIAKLDWMYEGPMATMADHQQDTEQYLLGKEVQVKKEESEVQRVESQPGMLFLNSVSAKNDMFTRLHEDPLLMIKQNEIRKRDDIVKNPIKMARIRQQL 165 M+LKFL KK W+ +L+N+E VWKAEQK E ++++E +KQI ++LQ AGLV K + +LD++YE + + E+YLLGK ++ K ES +Q+V + PG LF+ + ND + ++ DPLL+IKQ E+ R+ I NP+KM +R+++ Sbjct: 1 MALKFLNKKGWHTGSLRNIETVWKAEQKRDVENRKLEELQKQIKEEQEHLEFRKLQEQAGLVPKQE--RLDFLYESGLGV---GKPSNEEYLLGKPLEESKGESVIQQVAATPGSLFVEEKISANDQWRKIRSDPLLLIKQQELAARERIKNNPLKMEALRKEV 159
BLAST of NO21G01360 vs. NCBI_GenBank
Match: CBN74471.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 118.2 bits (295), Expect = 8.800e-23 Identity = 66/163 (40.49%), Postives = 106/163 (65.03%), Query Frame = 0 Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMDEFRKQIAXXXXXXXLKELQVSAGLVDKDQIAKLDWMYEGPMATMADHQQDTEQYLLGKEVQVK-KEESEVQRVE--SQPGMLFLNS-VSAKNDMFTRLHEDPLLMIKQNEIRKRDDIVKNPIKMAR 160 MSL FL KKTW+P+ L+N EKVW AEQK A E+KR++E KQ+ L+E+Q +AG ++ ++DWMYEGPM + D + ++ ++L+GK+ ++K K SE++ +E PG LF + + N+ F R++EDPLL +++ + +V NP+KM++ Sbjct: 1 MSLAFLFKKTWHPSTLQNSEKVWIAEQKDAAEKKRIEELTKQVREEQQVRELEEMQ-AAGGHGPERKQRIDWMYEGPMQSAQDQEAESNEFLMGKKFEMKDKGTSELKTIEETKAPGTLFAAAPATTANEAFRRVNEDPLLRMRKARMEAEQSVVNNPVKMSK 162
BLAST of NO21G01360 vs. NCBI_GenBank
Match: OQR86035.1 (pre-mRNA-splicing factor CWC25-like protein [Achlya hypogyna]) HSP 1 Score: 115.9 bits (289), Expect = 4.400e-22 Identity = 73/158 (46.20%), Postives = 103/158 (65.19%), Query Frame = 0 Query: 1 MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMDEFRKQIAXXXXXXXLKELQVSAGLVDKDQIAKLDWMYEGPMATMADHQQDTEQYLLGKEVQVKKEESEVQRVESQPGMLFLNSV-SAKNDMFTRLHEDPLLMIKQNEIRKRDDIVKNPIKM 158 MSL FLAKK+W+ +NLKNVEKVWKAEQK A EE + XXXXXXX D ++DWMYEGPMA + + E YLLGKE + + E+++++++ S PG L++++ SA ND F+RL+EDP++MIK+ + + ++KNP KM Sbjct: 1 MSLAFLAKKSWHTSNLKNVEKVWKAEQKHAQEENKXXXXXXXXXXXXXXXXXXXXXAKTTGKKLDTTQRVDWMYEGPMAA-SQTAKTAEDYLLGKEYKPEAEQNQLKQLSSTPGSLYMSAAPSAVNDSFSRLNEDPMMMIKRQQKAAQIAVLKNPAKM 157 The following BLAST results are available for this feature:
BLAST of NO21G01360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G01360 ID=NO21G01360|Name=NO21G01360|organism=Nannochloropsis oceanica|type=gene|length=2401bpback to top protein sequence of NO21G01360.1 >NO21G01360.1-protein ID=NO21G01360.1-protein|Name=NO21G01360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=619bpback to top Synonyms
Publications
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