NO21G01130, NO21G01130 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G01130 vs. NCBI_GenBank
Match: EWM22616.1 (rna methylase [Nannochloropsis gaditana]) HSP 1 Score: 219.2 bits (557), Expect = 1.400e-53 Identity = 123/224 (54.91%), Postives = 154/224 (68.75%), Query Frame = 0 Query: 17 QIEAFVSRHQAATDELEDIHMNACIDEAQACAERRTLSPFLPTTATDLATIFEALQIGPRHIIVDLGCGDGRPLIAAALLRGCRGLGVDISQECIDLARTIATEEGLRDK-VKFFRLDLLDDQDKALRFLIAAVEAQMSETG-----GGEKVVIFLYIYPSLLERLVELVRRLACACQGEGRQKMVQVVTLAYHFRGPL----TETVDLNQAGEGRIHVHRLNR 231 QIEA V+RH T+ LED H+++CIDEA +R TLSPFLPT A DLA+IF L++GPRHI+VDLGCGDGRPLIAAALL CRG+GVDISQ+CI LA++I ++EGL D+ V FFR DLL DQ+ L L+ AVEA+ E G E VV+FLY+YP+LL RLV L+ RL A + R V+VVTL YH P+ E V + G GR+ +H L + Sbjct: 14 QIEALVARHVKETEALEDSHLDSCIDEAAIQVQRHTLSPFLPTAAEDLASIFNILRLGPRHIMVDLGCGDGRPLIAAALLCKCRGVGVDISQQCIALAKSIVSQEGLSDRMVAFFRWDLLSDQEAVLNRLVEAVEAKAQEAAIECKDGVEAVVVFLYVYPTLLARLVCLLDRLVRAWRDFRR---VEVVTLTYHLEAPVGGGEGEGVLYRECG-GRVEIHTLEK 233
BLAST of NO21G01130 vs. NCBI_GenBank
Match: XP_005855210.1 (rna methylase, partial [Nannochloropsis gaditana CCMP526] >EKU21150.1 rna methylase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 213.8 bits (543), Expect = 5.700e-52 Identity = 116/199 (58.29%), Postives = 143/199 (71.86%), Query Frame = 0 Query: 17 QIEAFVSRHQAATDELEDIHMNACIDEAQACAERRTLSPFLPTTATDLATIFEALQIGPRHIIVDLGCGDGRPLIAAALLRGCRGLGVDISQECIDLARTIATEEGLRDK-VKFFRLDLLDDQDKALRFLIAAVEAQMSETG-----GGEKVVIFLYIYPSLLERLVELVRRLACACQGEGRQKMVQVVTLAYHFRGPL 210 QIEA V+RH T+ LED H+++CIDEA +R TLSPFLPT A DLA+IF L++GPRHI+VDLGCGDGRPLIAAALL CRG+GVDISQ+CI LA++I ++EGL D+ V FFR DLL DQ+ L L+ AVEA+ E G E VV+FLY+YP+LL RLV L+ RL A + R V+VVTL YH P+ Sbjct: 14 QIEALVARHVKETEALEDSHLDSCIDEAAIQVQRHTLSPFLPTAAEDLASIFNILRLGPRHIMVDLGCGDGRPLIAAALLCKCRGVGVDISQQCIALAKSIVSQEGLSDRMVAFFRWDLLSDQEAVLNRLVEAVEAKAQEAAIECKDGVEAVVVFLYVYPTLLARLVCLLDRLVRAWRDFRR---VEVVTLTYHLEAPV 209
BLAST of NO21G01130 vs. NCBI_GenBank
Match: XP_002178009.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50823.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 106.3 bits (264), Expect = 1.300e-19 Identity = 58/152 (38.16%), Postives = 85/152 (55.92%), Query Frame = 0 Query: 53 LSPFLPTTATDLATIFEALQIGPRHIIVDLGCGDGRPLIAAALLRGCRGLGVDISQECIDLARTIATEEGLRDKVKFFRLDLLDDQDKALRFLIAAVEAQMSETGGGEKVVIFLYIYPSLLERLVELVRRLACACQGEGRQKMVQVVTLAYH 205 LSP++PTTA +A E + +++D+GCGDGR ++AA L GCR +G+D+S CI +AR +A EE L D++ FF D D + L ++ + E+ + VIFLY YP+LL RL L+ + +VVTL YH Sbjct: 85 LSPYVPTTAAKIAKFVEFASLLESDVLLDIGCGDGRICVSAARLSGCRAVGIDVSPLCIAMARELAREENLEDRLSFFEADATIDPKRLL-------QSPLLESDLKDVTVIFLYTYPTLLGRLFPLLAKFT-------ENGKARVVTLTYH 222
BLAST of NO21G01130 vs. NCBI_GenBank
Match: WP_088335618.1 (methyltransferase domain-containing protein [Methanopyrus sp. KOL6]) HSP 1 Score: 77.4 bits (189), Expect = 6.400e-11 Identity = 44/123 (35.77%), Postives = 68/123 (55.28%), Query Frame = 0 Query: 56 FLPTTATDLATIFEALQIGPRHIIVDLGCGDGRPLIAAALLRGCRGLGVDISQECIDLARTIATEEGLRDKVKFFRLDLLDDQDKALRFLIAAVEAQMSETGGGEKVVIFLYIYPSLLERLVE 179 F+PT + I L++ P + +VDLGCGDGR +I+AA L GC G+GVD+ ++ ++LA T + G+ DK F D+ D + +E + V+F+Y+ PSLLE + E Sbjct: 36 FVPTPIETVVRILRKLELTPENRVVDLGCGDGRFVISAAYLYGCEGVGVDVREDVLELALTKSETLGVDDKTIFIHSDVRD---------VDLLEL--------DPDVVFVYLVPSLLEEISE 141
BLAST of NO21G01130 vs. NCBI_GenBank
Match: WP_017288877.1 (class I SAM-dependent methyltransferase [Leptolyngbya boryana] >BAS56546.1 putative SAM-dependent methyltransferase [Leptolyngbya boryana IAM M-101] >BAS62894.1 putative SAM-dependent methyltransferase [Leptolyngbya boryana dg5] >BAY57275.1 putative SAM-dependent methyltransferase [Leptolyngbya boryana NIES-2135]) HSP 1 Score: 75.9 bits (185), Expect = 1.900e-10 Identity = 39/85 (45.88%), Postives = 52/85 (61.18%), Query Frame = 0 Query: 50 RRTLSPFLPTTATDLATIFEALQIGPRHIIVDLGCGDGRPLIAAALLRGCRGLGVDISQECIDLARTIATEEGLRDKVKFFRLDL 135 RR F+PT + T+ E LQ+ +I DLGCGDGR LI+AAL G RG+G+D+ + A+ A E G+RD+VKF DL Sbjct: 3 RRPDIAFIPTPEAAIETLLEVLQVNDSDVIYDLGCGDGRILISAALQFGARGVGIDLDPLRVKEAQAKADELGIRDRVKFQEADL 87
BLAST of NO21G01130 vs. NCBI_GenBank
Match: OLE97624.1 (hypothetical protein AUG75_06060 [Cyanobacteria bacterium 13_1_20CM_4_61_6]) HSP 1 Score: 74.3 bits (181), Expect = 5.400e-10 Identity = 46/131 (35.11%), Postives = 70/131 (53.44%), Query Frame = 0 Query: 55 PFLPTTATDLATIFEALQIGPRHIIVDLGCGDGRPLIAAALLRGCRGLGVDISQECIDLARTIATEEGLRDKVKFFRLDLLDDQDKALRFLIAAVEAQMSETGGGEKVVIFLYIYPSLLERLV-ELVRRLA 185 P+ P+T ++ + E + GP+ ++ DLGCGDGR +IAAA G RG+GV+I + +A A G+ D+V+F R DL E GE V+ L++Y +L RL+ +L+R LA Sbjct: 43 PYFPSTDAAVSAMLELARTGPKDVVYDLGCGDGRIVIAAAKDFGARGVGVEIDPAPLRMAVYRAQRAGVGDRVRFVRGDLF-------------------EADIGEATVVTLFLYETLNRRLLPKLLRELA 154
BLAST of NO21G01130 vs. NCBI_GenBank
Match: AAM01668.1 (SAM-dependent methyltransferase [Methanopyrus kandleri AV19]) HSP 1 Score: 73.9 bits (180), Expect = 7.100e-10 Identity = 42/122 (34.43%), Postives = 65/122 (53.28%), Query Frame = 0 Query: 57 LPTTATDLATIFEALQIGPRHIIVDLGCGDGRPLIAAALLRGCRGLGVDISQECIDLARTIATEEGLRDKVKFFRLDLLDDQDKALRFLIAAVEAQMSETGGGEKVVIFLYIYPSLLERLVE 179 +PT + I L++ P++ +VDLGCGDGR +I+AA L GC G+GVD+ ++ ++LAR + + DK F D+ D + L V+F+Y+ PSLLE + E Sbjct: 37 VPTPIEIVVEILRKLELTPKNRVVDLGCGDGRFVISAAYLYGCEGMGVDVREDVLELARAKSETLRVDDKTIFIHSDVRDIDLREL-----------------NPDVVFVYLMPSLLEEISE 141
BLAST of NO21G01130 vs. NCBI_GenBank
Match: KLI65244.1 (hypothetical protein AAV99_04530 [Erythrobacter marinus]) HSP 1 Score: 73.9 bits (180), Expect = 7.100e-10 Identity = 41/103 (39.81%), Postives = 58/103 (56.31%), Query Frame = 0 Query: 55 PFLPTTATDLATIFEALQIGPRHIIVDLGCGDGRPLIAAALLRGCRGLGVDISQECIDLARTIATEEGLRDKVKFFRLDLLD----DQDKALRFLIAAVEAQM 154 P++ T + + + + ++GP ++DLG GDGR LIAAAL RG GLGVD+ ID A+ A GL D+V F DL D D D FL+ +V ++ Sbjct: 23 PYVGTRSAMVDAMLDMAEVGPSDYVIDLGTGDGRILIAAALDRGAGGLGVDLDPSLIDDAKAEADRLGLSDRVAFREQDLFDTSLQDADVVTMFLLPSVNLRL 125
BLAST of NO21G01130 vs. NCBI_GenBank
Match: WP_052768903.1 (methyltransferase domain-containing protein [Erythrobacter marinus]) HSP 1 Score: 73.9 bits (180), Expect = 7.100e-10 Identity = 41/103 (39.81%), Postives = 58/103 (56.31%), Query Frame = 0 Query: 55 PFLPTTATDLATIFEALQIGPRHIIVDLGCGDGRPLIAAALLRGCRGLGVDISQECIDLARTIATEEGLRDKVKFFRLDLLD----DQDKALRFLIAAVEAQM 154 P++ T + + + + ++GP ++DLG GDGR LIAAAL RG GLGVD+ ID A+ A GL D+V F DL D D D FL+ +V ++ Sbjct: 52 PYVGTRSAMVDAMLDMAEVGPSDYVIDLGTGDGRILIAAALDRGAGGLGVDLDPSLIDDAKAEADRLGLSDRVAFREQDLFDTSLQDADVVTMFLLPSVNLRL 154
BLAST of NO21G01130 vs. NCBI_GenBank
Match: OLP94540.1 (Neurofilament heavy polypeptide [Symbiodinium microadriaticum]) HSP 1 Score: 72.8 bits (177), Expect = 1.600e-9 Identity = 45/121 (37.19%), Postives = 62/121 (51.24%), Query Frame = 0 Query: 32 LEDIHMNACIDEAQACAERRTLSPFLPTTATDLATIFEALQIGPRHIIVDLGCGDGRPLIAAALLRGCRGLGVDISQECIDLARTIATEEGLRDKVKFFRLDLLDDQDKALRFLIAAVEAQ 153 LED+ A D + ++SPF+P A + + +A ++GP ++ DLGCGDG LI AA GCR +G+DI CI A A E + ++ F R DLL L L A E Q Sbjct: 2111 LEDLQQFA--DSEDSAFGPLSVSPFVPCAAGRIPYVLQAARLGPEDVLWDLGCGDGVVLIEAARRCGCRCVGLDIDGPCITAALQRAREANVEERCTFLRCDLLQLPQGTLGGLSAEQEFQ 2229 The following BLAST results are available for this feature:
BLAST of NO21G01130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G01130 ID=NO21G01130|Name=NO21G01130|organism=Nannochloropsis oceanica|type=gene|length=693bpback to top protein sequence of NO21G01130.1 >NO21G01130.1-protein ID=NO21G01130.1-protein|Name=NO21G01130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=231bpback to top Synonyms
Publications
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