NO21G01100, NO21G01100 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G01100 vs. NCBI_GenBank
Match: XP_005852627.1 (large subunit ribosomal protein L27e [Nannochloropsis gaditana CCMP526] >EKU23205.1 large subunit ribosomal protein L27e [Nannochloropsis gaditana CCMP526] >EWM22601.1 ribosomal protein l27 [Nannochloropsis gaditana]) HSP 1 Score: 247.3 bits (630), Expect = 2.900e-62 Identity = 125/141 (88.65%), Postives = 137/141 (97.16%), Query Frame = 0 Query: 1 MGIIKPGKVVVVLAGRYAGKKAVVVKALDEGSADKKFPHAIVCGIDVAPRKVTRTMNKKTIKRKTKVKPFIKSLNYTHIMPTRYAVDIDLKKAEEQTDDKKTLKRAIRKTLEERYLNQAAVAAKSERKSQGTSYFYKKLRF 142 MGIIKPGKVVVVLAGRYAGKKAVVVKALDEGS DK+FPHAIVCGIDVAPRKVTR+MNKKTIKRK+KVKPF+K++NYTHI+PTRY VDIDLKKAEE TDD+K LKRAIRKTLEERYL+QA++AAKSERKSQGT+YFYKKLRF Sbjct: 1 MGIIKPGKVVVVLAGRYAGKKAVVVKALDEGSVDKRFPHAIVCGIDVAPRKVTRSMNKKTIKRKSKVKPFVKAINYTHILPTRYVVDIDLKKAEEPTDDRKALKRAIRKTLEERYLDQASIAAKSERKSQGTAYFYKKLRF 141
BLAST of NO21G01100 vs. NCBI_GenBank
Match: CBJ25831.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 164.9 bits (416), Expect = 1.900e-37 Identity = 89/144 (61.81%), Postives = 113/144 (78.47%), Query Frame = 0 Query: 1 MGIIKPGKVVVVLAGRYAGKKAVVVKALDEGSADKKFPHAIVCGIDVAPRKVTRTMNKKTIKRKTKVKPFIKSLNYTHIMPTRYAVDIDLKKAEEQTDDKKT---LKRAIRKTLEERYLNQAAVAAKSERKSQGTSYFYKKLRF 142 MGIIK GKVVV+LAGRYAG+KA+VVK DEGS ++KF HAIV GID PR+VT+ M+K IK++TK+KPF+K +N HIMPTRY VDIDLKKA ++T K + +++A+RK EERYLNQ V KSE+K+ G YF++KLRF Sbjct: 21 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDETAIKASPTDVRKAVRKIFEERYLNQKDV--KSEKKATGVKYFFEKLRF 162
BLAST of NO21G01100 vs. NCBI_GenBank
Match: XP_008614658.1 (hypothetical protein SDRG_10447 [Saprolegnia diclina VS20] >XP_012205390.1 hypothetical protein SPRG_10070 [Saprolegnia parasitica CBS 223.65] >EQC31930.1 hypothetical protein SDRG_10447 [Saprolegnia diclina VS20] >KDO23924.1 hypothetical protein SPRG_10070 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 162.5 bits (410), Expect = 9.300e-37 Identity = 85/146 (58.22%), Postives = 111/146 (76.03%), Query Frame = 0 Query: 1 MGIIKPGKVVVVLAGRYAGKKAVVVKALDEGSADKKFPHAIVCGIDVAPRKVTRTMNKKTIKRKTKVKPFIKSLNYTHIMPTRYAVDIDLKKAEEQ-----TDDKKTLKRAIRKTLEERYLNQAAVAAKSERKSQGTSYFYKKLRF 142 MGI+K GKVVV+L GRYAG+KA+VVK DEG D+KF HAIV GID PRK+TR+M KK + +++KVKPF+K++NYTHIMPTRY DIDLKK ++ + + ++ I+K E+RYLNQA A KSE+K+ G S+F+KKLRF Sbjct: 1 MGIVKNGKVVVLLNGRYAGRKAIVVKTYDEGHGDRKFGHAIVAGIDRYPRKITRSMGKKKVAKRSKVKPFVKAVNYTHIMPTRYVADIDLKKVLDEEVMATPEARIESRKTIKKVFEDRYLNQA--ACKSEKKAAGVSFFFKKLRF 144
BLAST of NO21G01100 vs. NCBI_GenBank
Match: XP_002906319.1 (60S ribosomal protein L27 [Phytophthora infestans T30-4] >EEY65720.1 60S ribosomal protein L27 [Phytophthora infestans T30-4]) HSP 1 Score: 162.5 bits (410), Expect = 9.300e-37 Identity = 89/150 (59.33%), Postives = 108/150 (72.00%), Query Frame = 0 Query: 1 MGIIKPGKVVVVLAGRYAGKKAVVVKALDEGSADKKFPHAIVCGIDVAPRKVTRTMNKKTIKRKTKVKPFIKSLNYTHIMPTRYAVDIDLKKA---------EEQTDDKKTLKRAIRKTLEERYLNQAAVAAKSERKSQGTSYFYKKLRF 142 MGI+K GKVVV+L GR+AG+KA+VVK DEG D+KF HAIV GID PRKVTR M K +K++TKVKPF+K +NY HIMPTRY DIDLKK E + + +KT+K K EERYLNQA A KSE+K+ G S+F+KKLRF Sbjct: 1 MGIVKNGKVVVLLNGRFAGRKAIVVKTFDEGKGDRKFSHAIVAGIDRYPRKVTRAMGKNKLKKRTKVKPFVKYVNYNHIMPTRYVADIDLKKVLDDEVLANPESRIESRKTIK----KVFEERYLNQA--ACKSEKKAAGVSFFFKKLRF 144
BLAST of NO21G01100 vs. NCBI_GenBank
Match: OQR91445.1 (60S ribosomal protein L27 [Thraustotheca clavata]) HSP 1 Score: 161.0 bits (406), Expect = 2.700e-36 Identity = 86/147 (58.50%), Postives = 110/147 (74.83%), Query Frame = 0 Query: 4 IKPGKVVVVLAGRYAGKKAVVVKALDEGSADKKFPHAIVCGIDVAPRKVTRTMNKKTIKRKTKVKPFIKSLNYTHIMPTRYAVDIDLK---------KAEEQTDDKKTLKRAIRKTLEERYLNQAAVAAKSERKSQGTSYFYKKLRF 142 +K GKVVVVL GRYAG+KA+VVKA DEG+ D+KF HAIV GID PRK+TR+M KK + +++K+KPF+K++NY HIMPTRY DIDLK KAE + + +KT+K K E+RYLNQA A KSE+K+ G S+F+KKLRF Sbjct: 10 VKNGKVVVVLNGRYAGRKAIVVKAYDEGNGDRKFGHAIVAGIDRYPRKITRSMGKKKVAKRSKIKPFVKAINYNHIMPTRYVADIDLKKVLDEEVLSKAEARVESRKTIK----KVFEDRYLNQA--ACKSEKKAAGVSFFFKKLRF 150
BLAST of NO21G01100 vs. NCBI_GenBank
Match: XP_008911708.1 (hypothetical protein PPTG_16130 [Phytophthora parasitica INRA-310] >ETI37493.1 hypothetical protein F443_16524 [Phytophthora parasitica P1569] >ETK77718.1 hypothetical protein L915_16051 [Phytophthora parasitica] >ETL31164.1 hypothetical protein L916_15944 [Phytophthora parasitica] >ETL84426.1 hypothetical protein L917_15744 [Phytophthora parasitica] >ETM37587.1 hypothetical protein L914_15879 [Phytophthora parasitica] >ETN03164.1 hypothetical protein PPTG_16130 [Phytophthora parasitica INRA-310] >ETO66274.1 hypothetical protein F444_16494 [Phytophthora parasitica P1976] >ETP07366.1 hypothetical protein F441_16335 [Phytophthora parasitica CJ01A1] >ETP35416.1 hypothetical protein F442_16361 [Phytophthora parasitica P10297] >KUF78997.1 60S ribosomal protein L27 [Phytophthora nicotianae] >KUF86688.1 60S ribosomal protein L27 [Phytophthora nicotianae]) HSP 1 Score: 160.6 bits (405), Expect = 3.500e-36 Identity = 88/150 (58.67%), Postives = 108/150 (72.00%), Query Frame = 0 Query: 1 MGIIKPGKVVVVLAGRYAGKKAVVVKALDEGSADKKFPHAIVCGIDVAPRKVTRTMNKKTIKRKTKVKPFIKSLNYTHIMPTRYAVDIDLKKA---------EEQTDDKKTLKRAIRKTLEERYLNQAAVAAKSERKSQGTSYFYKKLRF 142 MGI+K GKVVV+L GR+AG+KA+VVK DEG D+KF HAIV GID PRKVTR M K +K+++KVKPF+K +NY HIMPTRY DIDLKK E + + +KT+K K EERYLNQA A KSE+K+ G S+F+KKLRF Sbjct: 1 MGIVKNGKVVVLLNGRFAGRKAIVVKTFDEGKGDRKFGHAIVAGIDRYPRKVTRAMGKNKLKKRSKVKPFVKYVNYNHIMPTRYVADIDLKKVLDDEVLANPESRIESRKTIK----KVFEERYLNQA--ACKSEKKAAGVSFFFKKLRF 144
BLAST of NO21G01100 vs. NCBI_GenBank
Match: XP_009515343.1 (hypothetical protein PHYSODRAFT_353474 [Phytophthora sojae] >EGZ28068.1 hypothetical protein PHYSODRAFT_353474 [Phytophthora sojae]) HSP 1 Score: 160.2 bits (404), Expect = 4.600e-36 Identity = 85/146 (58.22%), Postives = 107/146 (73.29%), Query Frame = 0 Query: 1 MGIIKPGKVVVVLAGRYAGKKAVVVKALDEGSADKKFPHAIVCGIDVAPRKVTRTMNKKTIKRKTKVKPFIKSLNYTHIMPTRYAVDIDLKKAEE-----QTDDKKTLKRAIRKTLEERYLNQAAVAAKSERKSQGTSYFYKKLRF 142 MGI+K GKVVV+L GR+AG+KA+VVK DEG D+KF HAIV GID PRKVTR M K +K+++KVKPF+K +NY HIMPTRY DIDLKK + + + ++ I+K EERYLNQA A KSE+K+ G S+F+KKLRF Sbjct: 1 MGIVKNGKVVVLLNGRFAGRKAIVVKTYDEGKGDRKFGHAIVAGIDRYPRKVTRAMGKNKLKKRSKVKPFVKYVNYNHIMPTRYVADIDLKKVLDDEVLANPETRNESRKTIKKVFEERYLNQA--ACKSEKKAAGVSFFFKKLRF 144
BLAST of NO21G01100 vs. NCBI_GenBank
Match: GAX92938.1 (60S ribosomal protein L27 [Pythium insidiosum]) HSP 1 Score: 159.5 bits (402), Expect = 7.900e-36 Identity = 89/150 (59.33%), Postives = 111/150 (74.00%), Query Frame = 0 Query: 1 MGIIKPGKVVVVLAGRYAGKKAVVVKALDEGSADKKFPHAIVCGIDVAPRKVTRTMNKKTIKRKTKVKPFIKSLNYTHIMPTRYAVDIDLKKA---------EEQTDDKKTLKRAIRKTLEERYLNQAAVAAKSERKSQGTSYFYKKLRF 142 MGI+K GKVV++L GR+AG+KAVVVK DEG D+KF HAIV GID PRKVTR M+K +K+K+KVKPFIK +N +H+MPTRY VDIDLKK E + + +KT+K K EERYLNQ+AV KSE+K+ G S+F+KKLRF Sbjct: 1 MGIVKNGKVVIMLNGRFAGRKAVVVKTHDEGHGDRKFGHAIVAGIDRYPRKVTRAMSKTKLKKKSKVKPFIKVVNLSHVMPTRYVVDIDLKKVLDDEVLANPESRIESRKTIK----KVFEERYLNQSAV--KSEKKAAGVSFFFKKLRF 144
BLAST of NO21G01100 vs. NCBI_GenBank
Match: OQR87439.1 (60S ribosomal protein L27 [Achlya hypogyna]) HSP 1 Score: 157.1 bits (396), Expect = 3.900e-35 Identity = 82/143 (57.34%), Postives = 108/143 (75.52%), Query Frame = 0 Query: 4 IKPGKVVVVLAGRYAGKKAVVVKALDEGSADKKFPHAIVCGIDVAPRKVTRTMNKKTIKRKTKVKPFIKSLNYTHIMPTRYAVDIDLKKAEEQ-----TDDKKTLKRAIRKTLEERYLNQAAVAAKSERKSQGTSYFYKKLRF 142 +K GKVVV+L GRYAG+KA+VVK DEG D+KF HAIV GID PRK+TR+M KK + +++KVKPF+K++NYTHIMPTRY DIDLKK ++ + + ++ I+K E+RYLNQA A KSE+K+ G S+F+KKLRF Sbjct: 6 VKNGKVVVLLNGRYAGRKAIVVKTYDEGHGDRKFGHAIVAGIDRYPRKITRSMGKKKVAKRSKVKPFVKAVNYTHIMPTRYVADIDLKKVLDEEVMATPEARIESRKTIKKVFEDRYLNQA--ACKSEKKAAGVSFFFKKLRF 146
BLAST of NO21G01100 vs. NCBI_GenBank
Match: XP_008871435.1 (hypothetical protein H310_07727 [Aphanomyces invadans] >ETV99659.1 hypothetical protein H310_07727 [Aphanomyces invadans]) HSP 1 Score: 156.0 bits (393), Expect = 8.700e-35 Identity = 84/150 (56.00%), Postives = 108/150 (72.00%), Query Frame = 0 Query: 1 MGIIKPGKVVVVLAGRYAGKKAVVVKALDEGSADKKFPHAIVCGIDVAPRKVTRTMNKKTIKRKTKVKPFIKSLNYTHIMPTRYAVDIDLKKA---------EEQTDDKKTLKRAIRKTLEERYLNQAAVAAKSERKSQGTSYFYKKLRF 142 MGI+K GKVVV+L GRYAG+KA+VVK DEG D+KF HAIV GID PRKVTR+M KK + +++K+KPF+K +NY HI+PTRY DI+LKK E + + +KT+K K E+RYLNQ A KSE+K+ G S+F+KKLRF Sbjct: 1 MGIVKNGKVVVLLNGRYAGRKAIVVKTYDEGHGDRKFAHAIVAGIDRYPRKVTRSMGKKKVAKRSKIKPFVKYVNYNHILPTRYVADIELKKVLDDEVLATPEARIESRKTIK----KVFEDRYLNQG--ATKSEKKAAGVSFFFKKLRF 144 The following BLAST results are available for this feature:
BLAST of NO21G01100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G01100 ID=NO21G01100|Name=NO21G01100|organism=Nannochloropsis oceanica|type=gene|length=1617bpback to top protein sequence of NO21G01100.1 >NO21G01100.1-protein ID=NO21G01100.1-protein|Name=NO21G01100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=142bpback to top Synonyms
Publications
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