NO21G01080, NO21G01080 (gene) Nannochloropsis oceanica

Overview
NameNO21G01080
Unique NameNO21G01080
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2548
Alignment locationchr21:339659..342206 +

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Properties
Property NameValue
DescriptionTransmembrane amino acid transporter family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:339659..342206 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO21G01080 vs. NCBI_GenBank
Match: XP_005852626.1 (hypothetical protein NGA_0541502 [Nannochloropsis gaditana CCMP526] >EKU23204.1 hypothetical protein NGA_0541502 [Nannochloropsis gaditana CCMP526] >EWM22612.1 Amino acid transporter, transmembrane [Nannochloropsis gaditana])

HSP 1 Score: 757.7 bits (1955), Expect = 2.400e-215
Identity = 402/517 (77.76%), Postives = 450/517 (87.04%), Query Frame = 0
Query:    1 MKTAAAATAFMLLRLAAAVRHSSSSYPYSASFGSRIRFPTTFLATVPSHSNAAFTTANKNHQQPRRVAVIRGGAAA------GVPVPASERGDGNKGSATSTATFNLIKNVLGAGVLSLPSGIGAFSKNPLAIIPAAALTMGLGSLSAYCFTLIARVCALNKVQTYGEAWKESVGEKTAWMVPAACTFKTFCACTAYSIIIGDSFSSLFGATPGFPAMLAKRTNVIAWMSAFVLLPLCMLKSFAPLAPFSLLGILGTMFTAGVLALRLFDGSYAPGGQFHEAIAANLRPALASGAGSPLFGPMMFVLVSMLSTSFIAHYNAPKFYTELEDRSIPKLNKVVQNSFNFCTAAFIFMMGCGFLTFGGASQGLILNNYAEKDVLAKLCRLAIGVSIVFGYPLTFVGIRDGVLDLMGKKNPSGRAQTITTLILLSITSTLAVFLRDVGFVVSFGGALLGSCIIYIFPALIFIRTMAAKIKSGEIVETQAVKREVLLNKGITVLGVVMAIIGASVSVLKTFVL 512
            MK  AAATA +LL  AA    S SS  Y++  G R  FP TFLATVPSH+  + T       Q RRVAVIRGGAA        VP   +E GDGNKGS+ STATFNLIKN+LGAGVLSLPSG+GAFS NP+A++PA ALTMG+GSLSAYCFTLIARVCALNKV+TYGEAW++SVG+KTAWMVPAACTFKTFCACTA+SIII DSFSSLFGATPGFPA+LA+RTNVI WM++ VLLPLCMLKSFAPLAPFSLLGILGT+FT  V+ALRL DGSYAPGGQFHEAIAA+LRP+L SG+ SPL  PM+FVLVSMLSTSFIAHYNAPKFYTELE+RSIPKLNKVVQNSFNFCTAAF F+MGCG+LTFGGASQGLILNNYAE+DVLAK+CRLAIG SIVFGYPLTFVGIRDGVL L+G+K PS R QT+TTL+LL++ STLAVFLRDVGFVVS GGALLGSCIIYIFPA+IFI+TMA K+ +GE+VET AVKREVLLNKGIT LGV++AIIGA+VSVLK F+L
Sbjct:    1 MKATAAATAMLLLPQAAL---SHSSPLYTSFSGPRAHFPATFLATVPSHT-LSNTKRPPILNQRRRVAVIRGGAAVTAEGSFQVPPAGTESGDGNKGSSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSSLFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYAPGGQFHEAIAASLRPSLLSGSSSPLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVQNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLLGRKAPSTRTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTMAQKVATGEVVETPAVKREVLLNKGITALGVLLAIIGATVSVLKAFIL 513          
BLAST of NO21G01080 vs. NCBI_GenBank
Match: CBJ49079.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 370.2 bits (949), Expect = 1.100e-98
Identity = 196/431 (45.48%), Postives = 284/431 (65.89%), Query Frame = 0
Query:   79 PVPASERGDGNKGSATSTATFNLIKNVLGAGVLSLPSGIGAFSKNPLAIIPAAALTMGLGSLSAYCFTLIARVCALNKVQTYGEAWKESVGEKTAWMVPAACTFKTFCACTAYSIIIGDSFSSLFGATPGFPAMLAKRTNVIAWMSAFVLLPLCMLKSFAPLAPFSLLGILGTMFTAGVLALRLFDGSYAPGGQFHEAIAANLRPALASGAGSPLFGPMMFVLVSMLSTSFIAHYNAPKFYTELEDRSIPKLNKVVQNSFNFCTAAFIFMMGCGFLTFGGASQGLILNNYAEKDVLAKLCRLAIGVSIVFGYPLTFVGIRDGVLDLMGKKNPSGRAQTITTLILLSITSTLAVFLRDVGFVVSFGGALLGSCIIYIFPALIFIRTMAAKIKSGEIVETQAVKREVLLNKGITVLGVVMAIIGASVSVLKTF 510
            P  A +    + G     + FNLIKNV+GAG+L++P G+ AFS++  A++P  A+ + LG +S YCF+LI RVCA     +YG+AW +++GEKT+W+  ++CT KTF AC AYSIIIGD F+ +  A  G P +LA RTN++  +SA VLLPLC+LK  + L+  S++G+LGT++TA V+ +R FD SY  GG+F   +A + RP   SG G+        +LVSMLST+F+AH+NAPKFY EL+D+S+P+ N VV +SF       + M    +LTFGGAS+  ILNN+A  D LA  CRLAI  SIV GYPL F+G + G L  +G  NP+   + + T +LL   + + V L D+GFVVSFGGA+LGS +++IFP +++I       K G+ ++    + E++ N  I+ LGV +A++G  +S+ K+F
Sbjct:   52 PGQAPQAESSSSGVTVGRSIFNLIKNVVGAGILAIPGGVTAFSQSRAAVVPTVAMIVALGGMSGYCFSLIGRVCAATGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIIGDVFADVLAAF-GAPGVLAARTNILCLVSALVLLPLCLLKDLSALSYTSIMGVLGTVYTAAVMGIRYFDNSYVEGGRFFAGLAKDARPVF-SGTGA--MNSQALILVSMLSTAFVAHFNAPKFYAELKDKSVPRFNTVVGSSFAAAIGLVVIMTLFPYLTFGGASKSFILNNFATSDRLATSCRLAIASSIVGGYPLVFMGAKTGALAAVGISNPTENQRKVGTTLLLGFFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWIAQSKKDAKWGKPLKGWR-RAEIMGNYVISALGVALAVLGGGLSIKKSF 477          
BLAST of NO21G01080 vs. NCBI_GenBank
Match: CBN77220.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 358.2 bits (918), Expect = 4.200e-95
Identity = 207/436 (47.48%), Postives = 286/436 (65.60%), Query Frame = 0
Query:   82 ASERGDGNKGSATSTATFNLIKNVLGAGVLSLPSGIGAFSKNPLAIIPAAALTMGLGSLSAYCFTLIARVCALNKVQTYGEAWKESVGEKTAWMVPAACTFKTFCACTAYSIIIGDSFSSLFGATPGFPAMLAKRTNVIAWMSAFVLLPLCMLKSFAPLAPFSLLGILGTMFTAGVLALRLFDGSYAPGGQFHEAIAANLRPALASGAGSPLF-----GPMMF-VLVSMLSTSFIAHYNAPKFYTELEDRSIPKLNKVVQNSFNFCTAAFIFMMGCGFLTFGGASQGLILNNYAEKDVLAKLCRLAIGVSIVFGYPLTFVGIRDGVLDLMGKKNPSGRAQTITTLILLSITSTLAVFLRDVGFVVSFGGALLGSCIIYIFPALIFIRTMAAKIKSGEIVETQAV--KREVLLNKGITVLGVVMAIIGASVSVLKTF 510
            ASE GD    S  S + FNL KN+LGAG+LSLP+G+ AFS +  AI+PA+ +   LG++SAY F LI R CA    ++Y ++W  +VG+K+AW+   AC    F  C A++IIIGDSFS+L   T G PA++AKR+N+I  +SA VLLPL +LK+   L   S+LG  G ++TA ++A+R FDGSYA GG+FH         AL   AG+P+F      P+ F VLVSMLST++ AH+NAP FY EL+D ++P+ +K+V  SF    A    +   GF+TFGGAS G ILNNYA  D LA + R+A+  S+VF YPL FVG+RDG+ ++ G K    R +T  T+ LL+  +  ++ L D+GFV SFGGAL+GS I+Y+FPAL+F++ +  K K   +    A   KRE+ LN GI  +GV M ++G  +SVL+TF
Sbjct:   11 ASEEGD---KSGMSASVFNLAKNILGAGMLSLPNGVAAFSDSRKAIVPASLIIAALGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQKSAWVPAGACVATCFAGCLAFTIIIGDSFSAL-AKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSYAAGGKFH---------ALLPAAGAPVFDAKGTNPICFLVLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSISFLASVATMTAVTAFGFMTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMSGAKPGETRNRTRWTVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAVGVAMGVLGCVISVLETF 433          
BLAST of NO21G01080 vs. NCBI_GenBank
Match: OEU16217.1 (Aa_trans-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 334.3 bits (856), Expect = 6.500e-88
Identity = 185/416 (44.47%), Postives = 265/416 (63.70%), Query Frame = 0
Query:   91 GSATST-ATFNLIKNVLGAGVLSLPSGIGAFSKNPLAIIPAAALTMGLGSLSAYCFTLIARVCALNKVQTYGEAWKESVGEKTAWMVPAACTFKTFCACTAYSIIIGDSFSSLFGATPGFPAMLAKRTNVIAWMSAFVLLPLCMLKSFAPLAPFSLLGILGTMFTAGVLALRLFDGSYAPGGQFHEAIAANLRPALASGAGSPLFGPMMFVLVSMLSTSFIAHYNAPKFYTELEDRSIPKLNKVVQNSFNFCTAAFIFMMGCGFLTFGGASQGLILNNYAEKDVLAKLCRLAIGVSIVFGYPLTFVGIRDGVLDLMGKKNPSGRAQTITTLILLSITSTLAVFLRDVGFVVSFGGALLGSCIIYIFPALIFIRTMAAKIKSGEIVETQAVKREVLLNKGITVLGVVMAIIGASVSV 506
            G AT T   FNL+K ++GAGVLSLP+GI AF+  P  +IPA +L   +G LSAY F LI R CA    ++Y +AW  +V EK++W+   A T KT CAC AYS+I+GD+F SL         M + +  V   +++ VLLPLC++K+ + LAPFSL+G LG ++TA  + +R F  +Y   G F   +A +LRP       + +F P   +LVSMLST+++AH+NAPKFY  L+D+++PK  KVV  SF    + F  +   GFLTFG +S GLILNNY+ +D +  L R+A+ VS+VF YPL FVG RDGVLDL+ K   + + Q + T+ LLS  + LA+ + DV FV++  GA LG+ +IY+FP L+F   +  K+ +     T+  KREV L  G  +LG++M I+G  +++
Sbjct:    1 GDATVTQLIFNLVKGIVGAGVLSLPAGIAAFASGPTGVIPAVSLIAIIGGLSAYGFALIGRCCAYTNTKSYRDAWSATVSEKSSWLPATAVTVKTICACLAYSMILGDTFVSLLSTV----GMASSKVPVTIGLTSIVLLPLCLMKNLSSLAPFSLVGSLGMLYTAVAMCVRYFGKAYTATGGFGNDMAPSLRPKFGPVGAAGVFTPSAAILVSMLSTAYMAHFNAPKFYNGLKDKTLPKYYKVVSTSFAISISIFALIASIGFLTFGSSSSGLILNNYSTRDGIMNLSRIAVAVSLVFSYPLAFVGARDGVLDLL-KMKGTAKTQNVLTVALLSGITGLALVIPDVSFVMALAGATLGNGLIYVFPFLMFRGAIKKKVDA-----TKGEKREVKLAMGSAILGILMGILGTKMAL 406          
BLAST of NO21G01080 vs. NCBI_GenBank
Match: GAX17140.1 (hypothetical protein FisN_5Hu526 [Fistulifera solaris])

HSP 1 Score: 330.9 bits (847), Expect = 7.200e-87
Identity = 196/416 (47.12%), Postives = 270/416 (64.90%), Query Frame = 0
Query:   91 GSAT-STATFNLIKNVLGAGVLSLPSGIGAFSKNPLAIIPAAALTMGLGSLSAYCFTLIARVCALNKVQTYGEAWKESVGEKTAWMVPAACTFKTFCACTAYSIIIGDSFSSLFGATPGFPAMLAKRTNVIAWMSAFVLLPLCMLKSFAPLAPFSLLGILGTMFTAGVLALRLFDGSYAPGGQFHEAIAANLRPALASGAGSPLFGPMMFVLVSMLSTSFIAHYNAPKFYTELEDRSIPKLNKVVQNSFNFCTAAFIFMMGCGFLTFGGASQGLILNNYAEKDVLAKLCRLAIGVSIVFGYPLTFVGIRDGVLDLMGKKNPSGRAQTITTLILLSITSTLAVFLRDVGFVVSFGGALLGSCIIYIFPALIFIRTMAAKIKSGEIVETQAVKREVLLNKGITVLGVVMAIIGASVSV 506
            G+AT S   FNL+K ++GAGVLSLP+GI  +   P A+ PA  L   +GSLSAY F LI R CAL   +T+ +AW  +V EK++W+   + T KT  A  AYS+I+GD+F+SLF AT GF   ++K T +I  +++ +LLPLC+LK+   LAPFSLLG LG ++TA  +A+R F  +YA GG+F + +  +L+PA   G  S +F P   +L+ MLST+++AH+NAPKFYTEL+D +IP+  KVV  SF      F  M G GFLTFGG S GLILNNY+ +D L  + R A+ +S+VF YPL F G RDGVLDL+   N S +   + T+ LLS  + LA+ + DV FV++F GA LG+ +IYI+PA++F R    K+ +     T+  KRE     G   LGV M  +GA  +V
Sbjct:  104 GTATVSQLIFNLVKGIVGAGVLSLPAGIAKYGNAPGAVTPAVFLIAAIGSLSAYGFALIGRSCALTGTKTFRQAWSAAVSEKSSWIPAWSVTLKTMFAVLAYSMILGDTFASLF-ATAGF--AVSKSTALIG-VTSTLLLPLCLLKNLNALAPFSLLGSLGMVYTAIAMAIRYFGKAYAVGGKFAKDLPVSLQPAF--GTQSSVFNPASTILLGMLSTAYMAHFNAPKFYTELKDNTIPRYVKVVATSFAISIGLFASMAGIGFLTFGGNSAGLILNNYSSRDGLMSISRFAVALSLVFSYPLAFTGARDGVLDLLKVNNASNKFLNLLTVGLLSGITGLAIIIPDVSFVMAFAGATLGNALIYIYPAIMF-RGAVNKLSN----PTKMQKRETKFAMGSAFLGVAMGTVGAIKAV 508          
BLAST of NO21G01080 vs. NCBI_GenBank
Match: XP_002184941.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43677.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 330.5 bits (846), Expect = 9.400e-87
Identity = 199/480 (41.46%), Postives = 287/480 (59.79%), Query Frame = 0
Query:   47 PSHSNAAFTTANKNHQQPRRVAVIRGGAAAGVP---VPASER--GDGNK-----GSATSTAT---FNLIKNVLGAGVLSLPSGIGAFSKNPLAIIPAAALTMGLGSLSAYCFTLIARVCALNKVQTYGEAWKESVGEKTAWMVPAACTFKTFCACTAYSIIIGDSFSSLFGATPGFPAMLAKRTNVIAWMSAFVLLPLCMLKSFAPLAPFSLLGILGTMFTAGVLALRLFDGSYAPGGQ--FHEAIAANLRPALASGAGSPLFGPMMFVLVSMLSTSFIAHYNAPKFYTELEDRSIPKLNKVVQNSFNFCTAAFIFMMGCGFLTFGGASQGLILNNYAEKDVLAKLCRLAIGVSIVFGYPLTFVGIRDGVLDLMGKKNPSGRAQTI--TTLILLSITSTLAVFLRDVGFVVSFGGALLGSCIIYIFPALIFIRTMAAKIKSGEIVETQAVKRE--VLLNKGITVLGVVMAIIGASVSVLK 508
            P HS  +  T   +      +  +RGGA A  P   +P S R    GN      GS T+T     FNL+K ++G GVLSLP+GI AF   P A++PA AL   +G LS Y F +I RVCA     +Y +AW  SVGE T+W+   + T KTF AC A+S+++ D+FSSL G +        +RT V+  ++A +LLPLC +K+ A LAPFSLLG++G  +TA  + +R  DGSY+ GG     E++AA LRP   +     +  P   +LV MLST+++AH+NAPKFY EL++ ++P+ ++VV  SF        F+   GFLTFG  + GL+LNNYA KD    + R+A+ VS+VF YPL F G RDGVLDL+   + S +   +  TT++LL++ +TLA  LRDV FV++FGGA LG+ + Y++PA+++            +V+ Q  K    V ++    VLG+VM  +GA +++ K
Sbjct:   41 PRHSVTSSHTDTGSPDVAHPIVTLRGGAKAKAPTKTLPKSPRKVHGGNAPVVAVGSGTATVASEIFNLVKAIVGVGVLSLPAGIAAFGDAPSALVPALALIAIIGVLSGYGFAIIGRVCAYTGATSYRDAWSRSVGEGTSWIPAWSTTLKTFLACLAFSMVLADTFSSLLGQSAD------QRTQVLLAVTAIILLPLCWMKNLASLAPFSLLGVMGMAYTAFAMTVRYLDGSYSTGGTGVLVESVAAALRPKFGNAGWESVASPSSLILVCMLSTAYMAHFNAPKFYLELQNNTLPRYHRVVGTSFGISILLMGFITAIGFLTFGANASGLVLNNYASKDSWMSMSRVAVAVSLVFSYPLAFQGCRDGVLDLLNVSSESRKNSLLNFTTILLLAVLTTLAAALRDVSFVLAFGGATLGNLLTYVYPAIMY----------KAVVDKQGRKERLGVTISSLSAVLGLVMGAVGAKLALDK 504          
BLAST of NO21G01080 vs. NCBI_GenBank
Match: XP_002291100.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91207.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 326.6 bits (836), Expect = 1.400e-85
Identity = 195/467 (41.76%), Postives = 283/467 (60.60%), Query Frame = 0
Query:   45 TVPSHSNAAFTTANKNHQQPRRVAVIRGGAAAGVPVPASERGDGNKGSAT-STATFNLIKNVLGAGVLSLPSGIGAFSKNPLAIIPAAALTMGLGSLSAYCFTLIARVCALNKVQTYGEAWKESVGEKTAWMVPAACTFKTFCACTAYSIIIGDSFSSLFGATPGFPAMLAKRTNVIAWMSAFVLLPLCMLKSFAPLAPFSLLGILGTMFTAGVLALRLFDGSYA-PGGQFHEAIAANLRPALASGAGSPLFGPMMFVLVSMLSTSFIAHYNAPKFYTELEDRSIPKLNKVVQNSFNFCTAAFIFMMGCGFLTFGGASQGLILNNYAEKDVLAKLCRLAIGVSIVFGYPLTFVGIRDGVLDLM--GKKNPSGRAQTITTLILLSITSTLAVFLRDVGFVVSFGGALLGSCIIYIFPALIFIRTMAAKIKSGEIVETQAVKREVLLNKGITVLGVVMAIIGASVSVLK 508
            T PS S+   +   +N +Q RR A +    A    V     G+   G+AT S   FN++K V+G GVLSLP+GI AF   P A IPA+ L   +G+++AY F+LI R+CA+    +Y  AW++SVG  TAW+   +C  KTF A  AYS+++GD+FS+LF        M   R   +  ++  VLLPLC+LK+ + LAPFSL GI G ++TA  +A+R FDGSY+ P   F   +A +LRPA+ +   S +F    F+L+ MLST+++AH+NAPKFY EL+D +I + N VV  SF+   A FI +   GF TFGGAS GLILNNY+ KD L    R+A+  S+VF YPL FVG RDG+L+++   K+  +       T  +L   + +A+ + D+ F++SFGGA LG+ +IY++PA++F     + +K+     T A K EV L      LG+ M  +G  +++ K
Sbjct:   23 TNPSTSSLT-SVPRRNTKQQRRPAFVNDNGAPSSSVTDVRGGEQGTGTATMSNEMFNMVKAVVGVGVLSLPAGIAAFGDAPSAAIPASILIATIGAIAAYNFSLIGRLCAITGATSYRGAWEKSVGPSTAWIPAVSCVVKTFFAILAYSMVLGDTFSALFTTI----GMNVSRQTSLIGLTLVVLLPLCLLKNLSSLAPFSLAGIAGMLYTAVAMAIRYFDGSYSDPTSGFALDVAESLRPAIGTKGASAVFSSNAFILICMLSTAYMAHFNAPKFYLELKDNTIARWNTVVATSFSLGIAFFIGIAAMGFATFGGASNGLILNNYSTKDTLMGFSRVAVAFSLVFTYPLAFVGCRDGILEMLQVPKEERTDAKLNNLTYAILGFVTAVALKITDLSFIMSFGGATLGNALIYVYPAIMF----RSAVKNMGDDATTAQKLEVYLATTFAALGIGMGSVGTKMALGK 480          
BLAST of NO21G01080 vs. NCBI_GenBank
Match: OEU16215.1 (hypothetical protein FRACYDRAFT_208094 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 320.1 bits (819), Expect = 1.300e-83
Identity = 179/418 (42.82%), Postives = 258/418 (61.72%), Query Frame = 0
Query:   90 KGSATSTATFNLIKNVLGAGVLSLPSGIGAFSKNPLAIIPAAALTMGLGSLSAYCFTLIARVCALNKVQTYGEAWKESVGEKTAWMVPAACTFKTFCACTAYSIIIGDSFSSLFGATPGFPAMLAKRTNVIAWMSAFVLLPLCMLKSFAPLAPFSLLGILGTMFTAGVLALRLFDGSYAPGGQFHEAIAANLRPALASGAGSPLFGPMMFVLVSMLSTSFIAHYNAPKFYTELEDRSIPKLNKVVQNSFNFCTAAFIFMMGCGFLTFGGASQGLILNNYAEKDVLAKLCRLAIGVSIVFGYPLTFVGIRDGVLDL--MGKKNPSGRAQTITTLILLSITSTLAVFLRDVGFVVSFGGALLGSCIIYIFPALIFIRTMAAKIKSGEIVETQAVKREVLLNKGITVLGVVMAIIGASVSV 506
            +G++     FNL+K ++G GVLSLP+G+ AF   P A IPA  L   +G LS Y F LI +VCA    ++Y EAW  +VGE T+W+   + TFKTF AC A+S+++ D+FSSL   T         R   +  ++A VLLPLC+LK+   LAPFSLLG++G  +TA  + +RL DGSY+  G+  E I +NLRP   +   + +  P   +LV MLST+++AH+NAPKFY EL+  ++P+ NKVV   F        F+   GFLTFG +  GL+LNNYA  D+   + R+A+ VS+VF YPL F G RDG LDL  +     S R   + T++LL + ++ A  LRDV FV++FGGA LG+ + Y++PAL++   +A + ++ E       K  V ++    VLGVVM  +GA+++V
Sbjct:    7 EGASIPNEVFNLVKGIVGVGVLSLPAGVAAFGSAPSAFIPAGILIAVIGILSGYGFALIGKVCAYTGAKSYREAWSRTVGEGTSWIPAYSVTFKTFLACLAFSMVLADTFSSLLETT---------RNTTLLVVTALVLLPLCLLKNLKSLAPFSLLGVMGMAYTAVAMTVRLLDGSYSNEGKLVEQITSNLRPQFGNLGAASVLSPNALILVCMLSTAYMAHFNAPKFYLELKQNTLPRFNKVVGLGFGISIFLMGFITMVGFLTFGKSCDGLVLNNYAGTDMWMGMSRIAVAVSLVFSYPLAFTGCRDGFLDLAKIPVDKRSARTLNLVTVMLLGVITSAACKLRDVSFVLAFGGATLGNALTYVYPALMYRAVVAQQGRTEE-------KFGVNVSMASAVLGVVMGAVGATMAV 408          
BLAST of NO21G01080 vs. NCBI_GenBank
Match: XP_002184984.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43431.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 315.8 bits (808), Expect = 2.400e-82
Identity = 194/470 (41.28%), Postives = 280/470 (59.57%), Query Frame = 0
Query:   39 PTTFLATVPSHSNAAFTTANKNHQQPRRVAVIRGGAAAGVPVPASERGDGNKGSATSTATFNLIKNVLGAGVLSLPSGIGAFSKNPLAIIPAAALTMGLGSLSAYCFTLIARVCALNKVQTYGEAWKESVGEKTAWMVPAACTFKTFCACTAYSIIIGDSFSSLFGATPGFPAMLAKRTNVIAWMSAFVLLPLCMLKSFAPLAPFSLLGILGTMFTAGVLALRLFDGSYAPGGQFHEAIAANLRPALASGAGSPLFGPMMFVLVSMLSTSFIAHYNAPKFYTELEDRSIPKLNKVVQNSFNFCTAAFIFMMGCGFLTFGGASQGLILNNYAEKDVLAKLCRLAIGVSIVFGYPLTFVGIRDGVLDLMG---KKNPSGRAQTITTLILLSITSTLAVFLRDVGFVVSFGGALLGSCIIYIFPALIFIRTMAAKIKSGEIVETQAVKREVLLNKGITVLGVVMAIIGASVSV 506
            PTT        + +   +++      R V   R   A+ V         G   ++     FNL+K ++GAGVLSLPSGI AF   P A++PA  L   +G+LSAY F LI RVC+L    +Y +AW ESV  KT+W+   + TF T  A  AYS+I+G++F SL   T G+      +T ++A ++  VLLPLC+LK+ + LAPFSLLG LG ++TA  + +R    +Y   G+F   +   L+P+  +   S ++     +L+ MLST+++AH+NAPKFYTEL + ++P+  KVV  SF    A F  M   GFLTFG AS GLILNNY+ KD L  L R+A+ VS+VF YPL FVG RDG+LD+     +K  +G    + T+ LLS+ + LA+ + DV FV++FGG+ LG+ +IYIFPAL+F R    K+K+     T+  +REV L     ++G+ M ++GA  +V
Sbjct:  126 PTTHAWQASPWTRSTLRSSSTAPPSARSVTTQRSRLASAVATADEPPLQGTGTASIPQEVFNLVKGIVGAGVLSLPSGIAAFGNAPSAVLPAVLLISLIGALSAYGFALIGRVCSLTGTTSYRDAWNESVSPKTSWITAWSVTFMTINATLAYSMILGETFQSLL-LTAGY---AWSKTKILALLTTTVLLPLCLLKNLSSLAPFSLLGSLGMVYTAIAMGIRYVTKAYVGTGKFAADLPRALQPSFGAIGASGVYNAKASILLGMLSTAYMAHFNAPKFYTELRNNTVPRYVKVVATSFGISIALFATMASLGFLTFGAASSGLILNNYSIKDNLMGLSRIAVAVSLVFSYPLAFVGARDGILDVANVAPEKRSTGLLNAL-TVGLLSLVTGLALVIPDVSFVMAFGGSTLGNALIYIFPALMF-RGAVRKLKA----PTKGQRREVKLAMTSALVGLGMGVVGAVKAV 585          
BLAST of NO21G01080 vs. NCBI_GenBank
Match: EJK73295.1 (hypothetical protein THAOC_05091 [Thalassiosira oceanica])

HSP 1 Score: 310.5 bits (794), Expect = 1.000e-80
Identity = 178/427 (41.69%), Postives = 256/427 (59.95%), Query Frame = 0
Query:   86 GDGNKGSATSTAT-----FNLIKNVLGAGVLSLPSGIGAFSKNPLAIIPAAALTMGLGSLSAYCFTLIARVCALNKVQTYGEAWKESVGEKTAWMVPAACTFKTFCACTAYSIIIGDSFSSLFGATPGFPAMLAKRTNVIAWMSAFVLLPLCMLKSFAPLAPFSLLGILGTMFTAGVLALRLFDGSYAPGGQFHEAIAANLRPALASGAGSPLFGPMMFVLVSMLSTSFIAHYNAPKFYTELEDRSIPKLNKVVQNSFNFCTAAFIFMMGCGFLTFGGASQGLILNNYAEKDVLAKLCRLAIGVSIVFGYPLTFVGIRDGVLDLMGKKNPSGRAQTI--TTLILLSITSTLAVFLRDVGFVVSFGGALLGSCIIYIFPALIFIRTMAAKIKSGEIVETQAVKREVLLNKGITVLGVVMAIIGASVSV 506
            GDG   SA  TAT     FNL+K+++GAGVLSLP+GI AF   P A+IPA  LT  +G +SAY F LIARVC +    +Y +AW  + G KT+W++  +     F    +YS+I+ DS   L        ++   RT  +  ++  +LLPLC++K+ A LAPFSLLGI+G  +T+  + +R F G+YA GG+F   IA  L+P+  S   S +      +LV MLST++IAH+NAP+F+ EL+D ++ +  KV   SF   TA +  +    FLTFG    GLILNNY+ KD++    R A+ +S++F YPL FVG RDG LDL+        +  +  TTL LL   S LA  L D+ FV S  GA+ G+ +I+++P+L+F     A IK+     TQA KRE  L   + ++G+V+A+IG  +S+
Sbjct:   64 GDGEAVSAEGTATIPDEVFNLVKSIVGAGVLSLPAGIAAFGNAPSALIPATLLTTAIGGISAYTFMLIARVCKMTGATSYSDAWDRTRGTKTSWVIAFSSALDCFMGNLSYSMILADSIKDLLSTF----SITTTRTRSLIGVTTLILLPLCLVKNLATLAPFSLLGIIGMAYTSFAIGIRYFGGAYAAGGRFLPDIAPALQPSFGSVGASGVVSANSLILVCMLSTAYIAHFNAPRFFRELKDNTMSRFGKVTSISFGISTAIYAVVSALAFLTFGANCDGLILNNYSTKDIVISASRFAVAISLIFSYPLLFVGTRDGTLDLLKVPEDKRTSSLLNNTTLALLGAISALAWKLTDLSFVSSISGAVFGTALIFVYPSLMF----RAAIKNLGDQATQAQKREAKLAMVVNLVGIVIAVIGTKMSL 482          
The following BLAST results are available for this feature:
BLAST of NO21G01080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005852626.12.400e-21577.76hypothetical protein NGA_0541502 [Nannochloropsis ... [more]
CBJ49079.11.100e-9845.48conserved unknown protein [Ectocarpus siliculosus][more]
CBN77220.14.200e-9547.48conserved unknown protein [Ectocarpus siliculosus][more]
OEU16217.16.500e-8844.47Aa_trans-domain-containing protein, partial [Fragi... [more]
GAX17140.17.200e-8747.12hypothetical protein FisN_5Hu526 [Fistulifera sola... [more]
XP_002184941.19.400e-8741.46predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002291100.11.400e-8541.76predicted protein [Thalassiosira pseudonana CCMP13... [more]
OEU16215.11.300e-8342.82hypothetical protein FRACYDRAFT_208094 [Fragilario... [more]
XP_002184984.12.400e-8241.28predicted protein [Phaeodactylum tricornutum CCAP ... [more]
EJK73295.11.000e-8041.69hypothetical protein THAOC_05091 [Thalassiosira oc... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL026nonsL026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR040ncniR040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004672NSK004672Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G01080.1NO21G01080.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602376gene_8064Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100126g24gene7828Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G01080.1NO21G01080.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G01080 ID=NO21G01080|Name=NO21G01080|organism=Nannochloropsis oceanica|type=gene|length=2548bp
AAACCACAGAGCATCACGGGAACCGCCTTACCTCGGAGTACCCACCACCA
TGAAGACGGCAGCGGCAGCTACGGCGTTTATGCTGCTGCGCTTGGCGGCG
GCCGTGAGACATTCCTCATCCTCCTACCCCTACTCGGCCTCCTTTGGTTC
CCGCATCCGCTTCCCGACTACCTTCCTGGCCACAGTCCCCTCCCACAGTA
ACGCCGCCTTTACTACCGCCAATAAGAATCACCAACAACCGCGTCGCGTC
GCGGTCATCCGAGGCGGAGCCGCTGCTGGTGTGCCTGTGCCAGCCTCGGA
GCGCGGGGATGGGAACAAGGGCTCAGCCACTTCGACGGCTACCTTTAATT
TGAgtacgttggagcttagacaacgaaggggaaatggggtcaggttagat
gggccgacatatgccctttagtttctatttctgtctgccgtgattacgtg
ccctctcaatttaagttttgacgggacttgacttgttcattaggagtgca
cattcgggtagcgtttttatggcgcgtgccgaagcagacagacatgtgcc
atacgctaaactcttgatgtgccatacgctaaactcttgtcctcacctct
ctctacctctttccctcccccgtcccccctccccctccctcaaaacagTC
AAGAATGTCCTCGGTGCAGGCGTTCTTTCCCTTCCTTCTGGCATCGGGGC
TTTCTCCAAGAACCCCCTCGCCATTATTCCTGCCGCTGCTCTTACCATGG
GCTTGGGCTCCCTGTCCGCCTACTGTTTCACACTTATCGCTCGAGTATGT
GCGCTGAACAAGGTGCAGACATACGGgtatgttttcacttttctttgtct
tgtttcaatgatggaggggactcaataaaatattgaaacggaagaggaag
aacatgcaagcaccagcgtgatgattcgtctcgtcatctcatgacttcca
ggaaagcatggtttctcagttgagccttccctcaattcctacccttcccc
accccccacacgcacagCGAGGCGTGGAAGGAATCCGTCGGCGAGAAGAC
TGCGTGGATGGTGCCAGCCGCTTGTACGTTTAAGACCTTCTGTGCCTGCA
CTGCGTACAGCATCATCATTGGTGATTCGTTTTCGTCGTTGTTTGGTGCT
ACACCTGGTTTCCCGGCCATGTTAGCCAAGCGCACGAACGTCATTGCGTG
GATGTCCGCCTTTGTGCTGCTGCCTTTATGCATGCTTAAGAGCTTTGCTC
CCTTGGCGCCTTTTTCGCTCCTCGGGATCTTGGGAACCATGTTCACTGCT
GGTGTGCTTGCTCTGCGTCTGTTCGACGGGTCTTACGCGCCGGGAGGACA
GTTTCACGAGGCTATTGCTGCCAACCTTCGTCCAGCCCTTGCTTCAGGGG
CGGGTTCTCCCCTGTTCGGTCCGATGATGTTCGTGCTTGTTTCAATGCTG
TCCACGTCGTTTATTGCGCATTACAATGCCCCCAAGTTCTACACGGAGTT
GGAGGATCGCTCGATTCCCAAGCTCAACAAGGTGGTGCAGAATTCTTTTA
ATTTTTGCACGGCCGCATTTATCTTTATGATGGGCTGCGGGTTCTTGACC
TTTGGTGGGGCGTCGCAGGGCTTGATTTTGAACAACTACGCCGAGAAGGA
CGTGCTTGCCAAGCTGTGTCGGTTGGCGATTGGGGTGAGCATAGTCTTTG
GTTACCCCTTGACGTTTGTGGGGATTCGCGACGGAGTGTTGGACTTGATG
GGGAAGAAGAATCCAAGCGGGAGAGCGCAGACAATCACCACGTTGATTTT
GTTGTCTATCACCAGCACCTTGGCTGTGTTCTTAAGAGATGTCGGGTTTG
TTGTCTCGTTTGGTGGGGCGTTGTTAGGGAGTTGCATTATTTATATATTC
CCGGCGTTGATTTTCATTAGGACCATGGCGGCCAAGATTAAGAGTGGGGA
GATCGTGGAGACGCAGGCGGTGAAGAGGGAGGTGCTTTTGAATAAGGGTA
TCACGGTTTTGGGGGTGGTGATGGCGATTATTGGCGCGTCGGTGTCGGTG
CTGAAGACGTTCGTGCTGAACAAGTAAGGAGACAGATAGATGGATTTCTC
TGAGACATTTTTTTTTAAAGTTGTTGTTGTGCTTCCCTGTCAGTGTGGGT
GGGTGCGAGTCAGTATGCGTGCTAAATGTGTGGGAGGAGCGGAGGGAGAG
GGAGAAGGAGTAGGGAACAAATAGCTACACACCCGAAAGGGGGGGGGGGG
AAGGAGGTGGGGAAAGCGCAATGCACGTGCCCCCCTCTTCAGCATTCTAG
GTGGTGTGGGTCGGTGGACAAATGGGATAGGACAGATGGGGATAAGGAGG
AGGAAAGAAGCAAAGGAGGGAAGGTACGACTGGGAGCACAAATAAAAAAT
CAGTAGGAACGCTGGGGGAAAAGGGTGGAAAGCTCACTGTAAGTAGATAC
TCAATAGTTTGTGACGATGAACGACGGAGGAGAAACGAAGGAGAAGGGGA
GGGAGTGGAGAAGAAGGTTTGAAAGGAGTACACACCAACACATTTTGA
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protein sequence of NO21G01080.1

>NO21G01080.1-protein ID=NO21G01080.1-protein|Name=NO21G01080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=514bp
MKTAAAATAFMLLRLAAAVRHSSSSYPYSASFGSRIRFPTTFLATVPSHS
NAAFTTANKNHQQPRRVAVIRGGAAAGVPVPASERGDGNKGSATSTATFN
LIKNVLGAGVLSLPSGIGAFSKNPLAIIPAAALTMGLGSLSAYCFTLIAR
VCALNKVQTYGEAWKESVGEKTAWMVPAACTFKTFCACTAYSIIIGDSFS
SLFGATPGFPAMLAKRTNVIAWMSAFVLLPLCMLKSFAPLAPFSLLGILG
TMFTAGVLALRLFDGSYAPGGQFHEAIAANLRPALASGAGSPLFGPMMFV
LVSMLSTSFIAHYNAPKFYTELEDRSIPKLNKVVQNSFNFCTAAFIFMMG
CGFLTFGGASQGLILNNYAEKDVLAKLCRLAIGVSIVFGYPLTFVGIRDG
VLDLMGKKNPSGRAQTITTLILLSITSTLAVFLRDVGFVVSFGGALLGSC
IIYIFPALIFIRTMAAKIKSGEIVETQAVKREVLLNKGITVLGVVMAIIG
ASVSVLKTFVLNK*
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Synonyms
Publications