Properties
Property Name Value
Description Unknown protein
Alignments
The following features are aligned
Aligned Feature Feature Type Alignment Location
chr21 genome chr21:334906..339411 -
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO21G01070 vs. NCBI_GenBank
Match:
EWM22602.1 (hypothetical protein Naga_100126g22 [Nannochloropsis gaditana])
HSP 1 Score: 149.4 bits (376), Expect = 3.400e-32
Identity = 144/385 (37.40%), Postives = 185/385 (48.05%), Query Frame = 0
Query: 122 LAGGIHSPYMRHLRRESTGXXXXXXXXXXXXXXXXXXXXXXXXXXXTRVTRAECENCGFKFLCAWSKGGSAYCSLDCRTTHNLHGVEDAFNHLPTGGSIEAAEHCYSLTPQKQ----------QYLQQQQTVEVSPVVHVE----VPDQPQLQGHVGPEAVVPVPA-----PATGGAEVIAAATMA-----------------NVNTDPAITVVDTASGIISSCSSSITTTDATFLPREPGV-IPSSASPLPL-QAQXXXXXXXXXXXXXXXXXXILSLLDP---NAVVALGPRPHACPTPSMMVMPCVSSFSTSNNSSHSDSGGIEGQAARPPSLLPSLTQPLPESSSATCGRGSGP-----SPSLFDSAQIASLERRRHAALH 461
L GG SPYMR R++S G RVTRAECENCG+ FLCA+SKGGS YCSLDCRTTHNL+GVEDAFNH+ TG S++AA H +S+TPQ+Q Q L Q +P ++ V Q + + + V + A P+ G T A + P + G S+ +++ LP E + P+ AS L + Q XXXXXXXXXXX P + V PRP AC TP M+MPC+SSFSTS + +G +GQ++ PS + +PLP ++A R G SP FD+A IASLERRRHAALH
Sbjct: 91 LVGGQASPYMRQARKDSLG--------------SSISSMGGSEGGSPRVTRAECENCGYVFLCAYSKGGSTYCSLDCRTTHNLYGVEDAFNHMVTGTSLDAAAHSFSVTPQRQAVYAHRPPPRQPLPGPQGSSEAPRARMDAARSVVRQSENKQNAAAHEDVNMGAGTGVCPSGVGGXXXRTQTEAVHGRARRPVRWPLRPKRRKHPPPLEPRAEGREGAHSAMTTAGLRRPHEGLPSEEEMATPALASDLKCSRGQGLTDPPAXXXXXXXXXXXXXXXSSPLFLHPVAVPRPRPAACATPLEMIMPCLSSFSTSGGEESAAAGDGQGQSSH-PSYPQAFPRPLPPPTAAIRSRAPGSKSDEGSPLPFDTAHIASLERRRHAALH 460
BLAST of NO21G01070 vs. NCBI_GenBank
Match:
XP_005852628.1 (hypothetical protein NGA_0686700, partial [Nannochloropsis gaditana CCMP526] >EKU23206.1 hypothetical protein NGA_0686700, partial [Nannochloropsis gaditana CCMP526])
HSP 1 Score: 125.9 bits (315), Expect = 4.100e-25
Identity = 62/113 (54.87%), Postives = 73/113 (64.60%), Query Frame = 0
Query: 122 LAGGIHSPYMRHLRRESTGXXXXXXXXXXXXXXXXXXXXXXXXXXXTRVTRAECENCGFKFLCAWSKGGSAYCSLDCRTTHNLHGVEDAFNHLPTGGSIEAAEHCYSLTPQKQ 235
L GG SPYMR R++S G RVTRAECENCG+ FLCA+SKGGS YCSLDCRTTHNL+GVEDAFNH+ TG S++AA H +S+TPQ+Q
Sbjct: 91 LVGGQASPYMRQARKDSLG--------------SSISSMGGSEGGSPRVTRAECENCGYVFLCAYSKGGSTYCSLDCRTTHNLYGVEDAFNHMVTGTSLDAAAHSFSVTPQRQ 189
The following BLAST results are available for this feature:
BLAST of NO21G01070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (
BLASTP analysis of N. oceanica IMET1 genes )
Total hits: 2
500 1000 1500 2000 2500 3000 3500 4000 4500 Expect = 3.40e-32 / Id = 37.40 Expect = 4.10e-25 / Id = 54.87 Sequence EWM22602.1 XP_005852628.1
Match Name E-value Identity Description
EWM22602.1 3.400e-32 37.40 hypothetical protein Naga_100126g22 [Nannochlorops... [more] XP_005852628.1 4.100e-25 54.87 hypothetical protein NGA_0686700, partial [Nannoch... [more]
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Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence
>NO21G01070 ID=NO21G01070|Name=NO21G01070|organism=Nannochloropsis oceanica|type=gene|length=4506bp back to top protein sequence of NO21G01070.1
>NO21G01070.1-protein ID=NO21G01070.1-protein|Name=NO21G01070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=598bp back to top