NO21G01040, NO21G01040 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G01040 vs. NCBI_GenBank
Match: EWM22607.1 (Lipid-binding START [Nannochloropsis gaditana]) HSP 1 Score: 315.8 bits (808), Expect = 1.400e-82 Identity = 174/307 (56.68%), Postives = 199/307 (64.82%), Query Frame = 0 Query: 4 PLSHVLRRATAVLALSAFASLFFLTHDDGARQGARFPLISILGLAGASSTELIFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEGQWVESTSADGRITTAYLKQAGSKGTIGLRGQALVDHHISEVLTVFLNTSLSTEWVSYLDHAEELPTSQENTHIIYQFFDMPLPLSDREFLFERRVESDRKRKTVVAKYRSVEHASKPQRKNVVRGETHNTFWKFRVLNKRQTQIEVQSTLNPKLPINGWVVQMMQNTYQRASLLSMLDLVKKADPHPVFMQW 311 PL VLRRAT VLA +A ASL LTH D ++ + PLI++LGLAGAS TE EG+WVE SADGR+TTA+ ++ G GTI LRGQA VDHHI+EVLTVFLNTSLSTEWVSYLDHAEELPT QEN HIIYQFFDMPLPLSDREFL R V SDR++ TV A Y SVEHASKP+R++VVRGET T W F K QT I+V+S+LNPKLP+NGW+VQMMQNTYQRASLL+MLDL+K+A PHP F W Sbjct: 47 PLGQVLRRATLVLAAAACASLLVLTHGD-VQEVGKLPLITLLGLAGASFTE----------EPASVGASRADSLSAVVGRTSVGVQIPPSSTQTQAKSLGRGSRQVTEGEDGGEGEWVEHRSADGRVTTAFRREPGKSGTIRLRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPTGQENAHIIYQFFDMPLPLSDREFLMRRTVASDRRKGTVWAHYASVEHASKPRRRSVVRGETCKTLWTFLAKGKDQTVIQVESSLNPKLPVNGWLVQMMQNTYQRASLLAMLDLIKRAKPHPSFAHW 342
BLAST of NO21G01040 vs. NCBI_GenBank
Match: CBJ33104.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 107.8 bits (268), Expect = 6.000e-20 Identity = 60/202 (29.70%), Postives = 99/202 (49.01%), Query Frame = 0 Query: 116 EEGQWVESTSADGRITTAYLKQAGSKGTIGLRGQALVDHHISEVLTVFLNTSLSTEWVSYLDHAEELPTSQENTH-------IIYQFFDMPLPLSDREFLFERRVESDRKRKTVVAKYRSVEHASKPQRKNVVRGETHNTFWKFRVLNKRQTQIEVQSTLNPKLPINGWVVQMMQNTYQRASLLSMLDLVKKADPHPVFMQW 311 EE E G T + GS ++ LRG+ VD HI + T FLNT+ + +WV +L EELPT + +++Q +DMP P+ DRE + R V D++ K ++A Y+S +H ++P VR + T W L +T IE ++ +PK + +V +Q + R ++ + + + HP +W Sbjct: 61 EESIAWELVEDSGGFRTFSSRVQGS-SSLALRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQASSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVYRTSWILTSLGSSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETVAGFVSSARNVELHPAMTKW 261
BLAST of NO21G01040 vs. NCBI_GenBank
Match: SMF29914.1 (START domain-containing protein [Pseudobacteriovorax antillogorgiicola]) HSP 1 Score: 80.5 bits (197), Expect = 1.000e-11 Identity = 54/187 (28.88%), Postives = 90/187 (48.13%), Query Frame = 0 Query: 119 QWVESTSADGRITTAYLKQAGSKGTIGLRGQALVDHHISEVLTVFLNTSLSTEWVSYLDHAEELPTSQENTHIIYQFFDMPLPLSDREFLFERRVESDRKRKTVVAKYRSVEHASKPQRKNV-VRGETHNTFWKFRVL---NKRQTQIEVQSTLNPKLPINGWVVQMMQNTYQRASLLSMLDLVKKA 302 QW + DG + Y K G+ G AL+D S+++ V ++ +WV A + T T I Y F MP P+SDR+F++ + R + +SVEH S P+ +V VRGE K+R+ N +QT +EV+ +PK + W+V ++Q + ++ + V+K+ Sbjct: 27 QWEQVKVEDG--ISVYRKSFEDSNVKGVAGAALIDAPASKIVWVLMDHEHKDDWVDKFRDARTIETPSRLTSIQYAAFSMPFPVSDRDFVYAYEFQYHSNRNMIEVDVKSVEHKSAPEDDSVGVRGEI--IMGKYRLYPSKNGKQTYVEVEYLADPKGLLPSWIVNIVQKNWPYKTIKGLRKQVQKS 209
BLAST of NO21G01040 vs. NCBI_GenBank
Match: OUR96712.1 (hypothetical protein A9Q84_10240 [Halobacteriovorax marinus]) HSP 1 Score: 71.6 bits (174), Expect = 4.700e-9 Identity = 50/183 (27.32%), Postives = 91/183 (49.73%), Query Frame = 0 Query: 120 WVESTSADGRITTAYLKQAGSKGTIGLRGQALVDHHISEVLTVFLNTSLSTEWVSYLDHAEELPTSQENTHIIYQFFDMPLPLSDREFLFERRVESDRKRKTVVAKYR--SVEHASKPQRKNVVRGETHNTFWKFRVLNKRQTQIEVQSTLNPKLPINGWVVQMMQNTYQRASLLSMLDLVKK 301 W E +G T Y + + +G+ +++ ++L V + +WV LD +EL + +IYQ F MPL +S+R+ ++ R R ++T V K+ SVEHA P+ VR E N+ + + L+ +T++ V+ +PK + W+V ++Q ++ +L + VKK Sbjct: 23 WDEINQEEG--ITVYSAEVPDNPLVAFKGKVIIEAPAKKILWVLADRKHRRDWVDRLDINDELEIISKVERVIYQSFKMPLFISNRDMVY--RSVLSRNKETGVYKFHLFSVEHAKAPETIG-VRAELVNSSYLVKPLSANKTEVTVEILSDPKGLLPAWLVNLIQKSWPLKTLRGLRTQVKK 200
BLAST of NO21G01040 vs. NCBI_GenBank
Match: WP_084191104.1 (hypothetical protein [Methylomarinum vadi]) HSP 1 Score: 70.5 bits (171), Expect = 1.100e-8 Identity = 36/157 (22.93%), Postives = 80/157 (50.96%), Query Frame = 0 Query: 144 IGLRGQALVDHHISEVLTVFLNTSLSTEWVSYLDHAEELPTSQENTHIIYQFFDMPLPLSDREFLFERRVESDRKRKTVVAKYRSVEHASKPQRKNVVRGETHNTFWKFRVLNKRQTQIEVQSTLNPKLPINGWVVQMMQNTYQRASLLSMLDLVKK 301 + +G ++ H ++++++V + + +W++ + A+ + T I Y +P L+DR+F+F+ R+ ++ SVEH KP R N+VRG ++ K R L +T +E+ +PK + W+V ++ + ++ + + +K+ Sbjct: 49 VAFKGVDILHHSMTDIISVLSDIEKADQWINGMVEADIVEILGPTTRIDYNRQHLPWSLNDRDFVFKITTRLSDDRQQIIFDLASVEHEQKPIRPNIVRGHLLKSYLKLRALAANKTALEIMMLADPKGALPVWLVNLVNRQWAPNTINGLRNYLKQ 205
BLAST of NO21G01040 vs. NCBI_GenBank
Match: PIP93230.1 (hypothetical protein COW78_16590 [Bdellovibrio sp. CG22_combo_CG10-13_8_21_14_all_39_27] >PIQ59294.1 hypothetical protein COW00_11235 [Bdellovibrio sp. CG12_big_fil_rev_8_21_14_0_65_39_13] >PIR32305.1 hypothetical protein COV37_20525 [Bdellovibrio sp. CG11_big_fil_rev_8_21_14_0_20_39_38] >PJB52544.1 hypothetical protein CO099_12035 [Bdellovibrio sp. CG_4_9_14_3_um_filter_39_7]) HSP 1 Score: 65.1 bits (157), Expect = 4.400e-7 Identity = 40/165 (24.24%), Postives = 77/165 (46.67%), Query Frame = 0 Query: 119 QWVESTSADGRITTAYLKQAGSKGTIGLRGQALVDHHISEVLTVFLNTSLSTEWVSYLDHAEELPTSQENTHIIYQFFDMPLPLSDREFLFERRVESDRKRKTVVAKYRSVEHASKPQRKNVVRGETHNTFWKFRVLNKRQTQIEVQSTLNPKLPINGWVVQMMQ 284 +W ++ D I Y G + ++GQ + +H ISE+L++ +T WV YL + + + Y ++ P P DR F+ + + ++++K V +S++H P+ N VRG T+ + R + +T E+ + + W+V M+Q Sbjct: 27 KWEIASQTDDII--VYKAPKHESGVVPIKGQTVFNHSISEILSLIADTPKKINWVPYLKESYLVDAVNPFRRVEYARYNSPWPFEDRVFVLDIEGDYNKEKKEVFIALKSIDHPKIPKDDNSVRGMTYYGAIRIRDMGINKTYFEIVLLSDFAGNVPHWIVNMVQ 189
BLAST of NO21G01040 vs. NCBI_GenBank
Match: WP_065675761.1 (hypothetical protein [Vibrio celticus] >SBT12297.1 START domain protein [Vibrio celticus]) HSP 1 Score: 64.3 bits (155), Expect = 7.600e-7 Identity = 38/152 (25.00%), Postives = 71/152 (46.71%), Query Frame = 0 Query: 147 RGQALVDHHISEVLTVFLNTSLSTEWVSYLDHAEELPTSQENTHIIYQFFDMPLPLSDREFLFERRVESDRKRKTVVAKYRSVEHASKPQRKNVVRGETHNTFWKFRVLNKRQTQIEVQSTLNPKLPINGWVVQMMQNTYQRASLLSMLDLV 299 R +A + +++ ++ +F +TS+ T+WV +D EE+ E + + P P+SDRE + E +E D TV+ H K +VR + W + L+ T I Q +P I W++ M+ + +LL + +++ Sbjct: 50 RAEADIQANLTSIIALFTDTSVGTQWVENIDEMEEIEHFSEVHTVTKTYTKAPWPVSDREAIVENFIEQDPDALTVMITQHGRPHYQPNNDKRIVRVAHLESRWILKPLDNNTTHISYQVLSDPGGSIPSWLINMVAVSQPYKTLLGLSEML 201 The following BLAST results are available for this feature:
BLAST of NO21G01040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G01040 ID=NO21G01040|Name=NO21G01040|organism=Nannochloropsis oceanica|type=gene|length=2246bpback to top protein sequence of NO21G01040.2 >NO21G01040.2-protein ID=NO21G01040.2-protein|Name=NO21G01040.2|organism=Nannochloropsis oceanica|type=polypeptide|length=372bpback to top protein sequence of NO21G01040.1 >NO21G01040.1-protein ID=NO21G01040.1-protein|Name=NO21G01040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bpback to top Synonyms
Publications
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