NO21G00940, NO21G00940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G00940 vs. NCBI_GenBank
Match: EWM22608.1 (aminotransferase class i and ii [Nannochloropsis gaditana]) HSP 1 Score: 270.4 bits (690), Expect = 4.900e-69 Identity = 122/142 (85.92%), Postives = 133/142 (93.66%), Query Frame = 0 Query: 62 YDPLFDDVPDRRNTSSLKWSKYGDEILPLWVADMDFRAPQCVIDAMHARAEHGVYGYSVPKEEVTMEVIKYLKRTAHYQIEPDWIVWSHGLVPALTVAARMAGGPGDSVMTNTPIYPPFLWTPKTADMTTLQVPLKFEGEGG 204 Y+PLFDD PDRR TSSLKW+KYG +ILPLWVADMDFRAPQCVIDAMHARAEHGVYGYSVP+EEVT VIKYL+RTAHY++EP+WIVWSHGLVPALTVAARMAGG GDSVMTNTPIYPPFLWTPKTADM TLQVPL+F+ + G Sbjct: 39 YNPLFDDAPDRRATSSLKWTKYGPDILPLWVADMDFRAPQCVIDAMHARAEHGVYGYSVPREEVTQAVIKYLERTAHYKVEPEWIVWSHGLVPALTVAARMAGGAGDSVMTNTPIYPPFLWTPKTADMQTLQVPLRFDEDLG 180
BLAST of NO21G00940 vs. NCBI_GenBank
Match: OIP98302.1 (aspartate aminotransferase [Syntrophobacteraceae bacterium CG2_30_61_12]) HSP 1 Score: 153.3 bits (386), Expect = 8.700e-34 Identity = 69/137 (50.36%), Postives = 91/137 (66.42%), Query Frame = 0 Query: 66 FDDVPDRRNTSSLKWSKYGD-EILPLWVADMDFRAPQCVIDAMHARAEHGVYGYSVPKEEVTMEVIKYLKRTAHYQIEPDWIVWSHGLVPALTVAARMAGGPGDSVMTNTPIYPPFLWTPKTADMTTLQVPLKFEGE 202 FD + DRR T+S KW KY D +++PLWVADMDF +P+ V+DA+ R +HGVYGY++P E+ V+ YL ++ I PDW+VW GLV L V +RM G PGD VMT TPIYP F+ P ++VPL +GE Sbjct: 16 FDAIVDRRGTASQKWEKYKDRDVIPLWVADMDFVSPRAVVDALRDRVDHGVYGYTLPPLELAEAVLAYLASRYNWTISPDWLVWLPGLVTGLNVCSRMIGRPGDQVMTATPIYPAFMTAPVNQQRELVKVPLVLDGE 152
BLAST of NO21G00940 vs. NCBI_GenBank
Match: WP_028455998.1 (putative C-S lyase [Chitinilyticum litopenaei]) HSP 1 Score: 152.5 bits (384), Expect = 1.500e-33 Identity = 75/141 (53.19%), Postives = 89/141 (63.12%), Query Frame = 0 Query: 70 PDRRNTSSLKWSKYGD-EILPLWVADMDFRAPQCVIDAMHARAEHGVYGYSVPKEEVTMEVIKYLKRTAHYQIEPDWIVWSHGLVPALTVAARMAGGPGDSVMTNTPIYPPFLWTPKTADMTTLQVPLKFEGEGGGGNGGW 210 PDRR T+SLKW KY D +ILPLWVADMDF AP V+ A+H R HGV GY P E + I Y R +QI+PDW+VW GLV L +A R G PGD+V+T TP+YPPFL P A T + VPL + GG GW Sbjct: 6 PDRRLTASLKWDKYRDRDILPLWVADMDFAAPPAVLAALHERIAHGVLGYGNPPESLPAAFIDYAARHYGWQIDPDWLVWLPGLVQGLNLACRAVGEPGDAVLTATPVYPPFLRAPGLAGRTLITVPLAEQ----GGRWGW 142
BLAST of NO21G00940 vs. NCBI_GenBank
Match: KPJ78609.1 (aspartate aminotransferase [Deltaproteobacteria bacterium SG8_13]) HSP 1 Score: 152.1 bits (383), Expect = 1.900e-33 Identity = 72/136 (52.94%), Postives = 91/136 (66.91%), Query Frame = 0 Query: 66 FDDVPDRRNTSSLKWSKY-GDEILPLWVADMDFRAPQCVIDAMHARAEHGVYGYSVPKEEVTMEVIKYLKRTAHYQIEPDWIVWSHGLVPALTVAARMAGGPGDSVMTNTPIYPPFLWTPKTADMTTLQVPLKFEG 201 FD+V DRR+TSS KW KY G +ILPLWVADMDFR+P V+DA+ RA+HGV+GYS P E+T EV + L +++++ WIVW GLV L V+ R G GD VMT TP+YPPFL P ++ VPL G Sbjct: 7 FDEVIDRRSTSSAKWDKYAGKDILPLWVADMDFRSPPAVVDALKQRADHGVFGYSQPPMELTREVARMLASRYNWRVDERWIVWIPGLVTGLNVSCRAVGESGDGVMTATPVYPPFLTAPGFSNRKLATVPLAKNG 142
BLAST of NO21G00940 vs. NCBI_GenBank
Match: WP_078790076.1 (putative C-S lyase [Geobacter thiogenes] >SJZ84007.1 cystathione beta-lyase [Geobacter thiogenes]) HSP 1 Score: 151.4 bits (381), Expect = 3.300e-33 Identity = 66/132 (50.00%), Postives = 91/132 (68.94%), Query Frame = 0 Query: 66 FDDVPDRRNTSSLKWSKY-GDEILPLWVADMDFRAPQCVIDAMHARAEHGVYGYSVPKEEVTMEVIKYLKRTAHYQIEPDWIVWSHGLVPALTVAARMAGGPGDSVMTNTPIYPPFLWTPKTADMTTLQVPL 197 FD + DRR+T+S KW +Y G +++PLWVADMDFR+P V++A+ R EHGV+GYS P +E+ V+ L++ +Q++PDW+VW GLV L V R G PGD+V T TP+YPPFL P A+ + VPL Sbjct: 4 FDTLIDRRHTASEKWDRYAGQDVIPLWVADMDFRSPPAVLEALQQRVEHGVFGYSSPPKELIAVVLAMLQQEYRWQVQPDWLVWLPGLVCGLNVTCRAVGAPGDAVATFTPVYPPFLTAPGLAERDLISVPL 135
BLAST of NO21G00940 vs. NCBI_GenBank
Match: OIP07768.1 (aspartate aminotransferase [Betaproteobacteria bacterium CG2_30_68_42] >PIV73408.1 aspartate aminotransferase [Rhodocyclales bacterium CG17_big_fil_post_rev_8_21_14_2_50_68_7]) HSP 1 Score: 151.0 bits (380), Expect = 4.300e-33 Identity = 68/135 (50.37%), Postives = 90/135 (66.67%), Query Frame = 0 Query: 64 PLFDDVPDRRNTSSLKWSKYGD-EILPLWVADMDFRAPQCVIDAMHARAEHGVYGYSVPKEEVTMEVIKYLKRTAHYQIEPDWIVWSHGLVPALTVAARMAGGPGDSVMTNTPIYPPFLWTPKTADMTTLQVPLK 198 P FD +R SLKW++YG ++LP+WVADMDFRAP+ V+DA+H R EHGV+GY+ P + V++ L R ++IEPDW++W GLV L VA R G PGD+V+T TPIYPPFL P+ A PL+ Sbjct: 5 PDFDAPAERHGGDSLKWNRYGGRDVLPMWVADMDFRAPEAVLDALHRRVEHGVFGYARPWASLVEAVVEALARDHRWRIEPDWLIWLPGLVTGLNVACRAVGEPGDAVLTCTPIYPPFLSAPRHAARVLATAPLE 139
BLAST of NO21G00940 vs. NCBI_GenBank
Match: WP_012528497.1 (putative C-S lyase [Geobacter bemidjiensis] >ACH37087.1 pyridoxal-5'-phosphate-dependent enzyme [Geobacter bemidjiensis Bem]) HSP 1 Score: 150.2 bits (378), Expect = 7.400e-33 Identity = 70/141 (49.65%), Postives = 93/141 (65.96%), Query Frame = 0 Query: 66 FDDVPDRRNTSSLKWSKYGD-EILPLWVADMDFRAPQCVIDAMHARAEHGVYGYSVPKEEVTMEVIKYLKRTAHYQIEPDWIVWSHGLVPALTVAARMAGGPGDSVMTNTPIYPPFLWTPKTADMTTLQVPLKFEGEGGGG 206 FD++ DRR TSS KW KY D +I+PLWVADMDFR+P VIDA+H R HGV+GY+ P E + V++ L+ +Q+ +WIVW GLV L V+ R G GD V+T TP+YPPF+ P + ++VPL+ E EG G Sbjct: 7 FDEIIDRRGTSSEKWDKYRDRDIIPLWVADMDFRSPPAVIDALHERVSHGVFGYTAPSESLVEAVLQSLRDEFGWQVAKEWIVWLPGLVTGLNVSCRAVGAAGDDVITLTPVYPPFMSAPPLSGRNAIKVPLRCE-EGRWG 146
BLAST of NO21G00940 vs. NCBI_GenBank
Match: AQT68929.1 (Cystathionine beta-lyase PatB [Phycisphaerae bacterium ST-NAGAB-D1]) HSP 1 Score: 150.2 bits (378), Expect = 7.400e-33 Identity = 68/135 (50.37%), Postives = 91/135 (67.41%), Query Frame = 0 Query: 63 DPLFDDVPDRRNTSSLKWSKY-GDEILPLWVADMDFRAPQCVIDAMHARAEHGVYGYSVPKEEVTMEVIKYLKRTAHYQIEPDWIVWSHGLVPALTVAARMAGGPGDSVMTNTPIYPPFLWTPKTADMTTLQVPL 197 D +FD V DR +SSLKW +Y G +I+P+WVADMDF AP VI A+H R +HGV+GY++P E+T +++YL +QIEP WIVW GLV + VA+R G G+ ++T TP YPPFL P +D + VPL Sbjct: 2 DSVFDKVVDRSCSSSLKWDRYKGRDIIPMWVADMDFEAPPAVIQALHTRVDHGVFGYTLPPAELTNTILEYLADEFSWQIEPGWIVWLPGLVTGINVASRSTGESGNEIITFTPAYPPFLDAPGLSDRKNVTVPL 136
BLAST of NO21G00940 vs. NCBI_GenBank
Match: WP_012471008.1 (pyridoxal phosphate-dependent aminotransferase [Geobacter lovleyi] >ACD96683.1 aminotransferase class I and II [Geobacter lovleyi SZ]) HSP 1 Score: 149.1 bits (375), Expect = 1.600e-32 Identity = 68/132 (51.52%), Postives = 88/132 (66.67%), Query Frame = 0 Query: 66 FDDVPDRRNTSSLKWSKY-GDEILPLWVADMDFRAPQCVIDAMHARAEHGVYGYSVPKEEVTMEVIKYLKRTAHYQIEPDWIVWSHGLVPALTVAARMAGGPGDSVMTNTPIYPPFLWTPKTADMTTLQVPL 197 FD V DRRNT S KW +Y G +I+PLWVADMDFR+P V++A+ R EHGV+GYS P EE+ V+ L++ +Q++ W+VW GLV L V+ R G PGD+V T TP+YPPFL P A + VPL Sbjct: 4 FDTVIDRRNTGSEKWDRYAGQDIIPLWVADMDFRSPPAVLEALQQRVEHGVFGYSRPPEELVAVVLAMLRQEYGWQVQSKWLVWLPGLVCGLNVSCRAVGAPGDAVATFTPVYPPFLTAPGLAGRELISVPL 135
BLAST of NO21G00940 vs. NCBI_GenBank
Match: WP_091196771.1 (putative C-S lyase [Formivibrio citricus] >SFN85122.1 cystathione beta-lyase [Formivibrio citricus]) HSP 1 Score: 149.1 bits (375), Expect = 1.600e-32 Identity = 66/132 (50.00%), Postives = 89/132 (67.42%), Query Frame = 0 Query: 66 FDDVPDRRNTSSLKWSKY-GDEILPLWVADMDFRAPQCVIDAMHARAEHGVYGYSVPKEEVTMEVIKYLKRTAHYQIEPDWIVWSHGLVPALTVAARMAGGPGDSVMTNTPIYPPFLWTPKTADMTTLQVPL 197 FD V R+ TSSLKW KY G ++LPLWVADMDF AP VI+A+HAR +HG++GY+ V++YL+ + I+P+WIVW GLVP + +A R G PGD+ +T TP+YPPFL+ P + + VPL Sbjct: 5 FDAVIPRQGTSSLKWEKYAGRDVLPLWVADMDFAAPPAVIEALHARIDHGIFGYTRSPASANAAVVEYLQARYGWAIQPEWIVWLPGLVPGINLACRAVGEPGDAALTCTPVYPPFLFAPGLNQLELVAVPL 136 The following BLAST results are available for this feature:
BLAST of NO21G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G00940 ID=NO21G00940|Name=NO21G00940|organism=Nannochloropsis oceanica|type=gene|length=995bpback to top protein sequence of NO21G00940.1 >NO21G00940.1-protein ID=NO21G00940.1-protein|Name=NO21G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=218bpback to top Synonyms
Publications
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