NO21G00790, NO21G00790 (gene) Nannochloropsis oceanica

Overview
NameNO21G00790
Unique NameNO21G00790
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1743
Alignment locationchr21:266354..268096 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:266354..268096 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G00790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL026nonsL026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR052ncniR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G00790.1NO21G00790.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G00790.1NO21G00790.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G00790 ID=NO21G00790|Name=NO21G00790|organism=Nannochloropsis oceanica|type=gene|length=1743bp
ATGAACACTGTCACCGATGAAAAGCCGCTTTCTCAGAAAGTAGTCAGAGA
ACTCTTTTTTGCTTATCGGTGGGAGATGAGAAACAGGGAATGCTGCATTC
CCGTAGACATCGTGGCTACGCATCTGGCCGTCCCTGTGGGGTTATTGCAG
TCCCTCATATCCGGCAACAATGGCTTCCATTGGTCCGATTACTGCAGCGG
AGGACCCAGTGAGATTCATTTAGAGTGTCCCAAGACAAAGCAGGTGCACC
TGTGCTGGAACAATGCCTCCCATCTCCTCCTCTCTTTCAAGGGCATGTTg
taagtacctctctcacatcgttctgaaagagggctgggtcttcttcctcc
tctcgtaacctttgaatgttactctgtcagtctcctcgttgcatttacgg
tgttatttcatcggcatgccttcatatccttctccgcttcctcatttata
tcatttcttgattcatctatgtattaatgtcgcattcatctactcgtcta
cgttgtcctgtacaatacagGAAGCTGGTATCCCTTATACAGGACAACGA
AGTGGCGGCAAACGTCCGTAACTACCTGTGCAACACTTTAGAGGACGAGT
TTGCGCGGATCGAAGCCGCGCACGACAGCACCCTTCGCTTGTTGGCGGAT
GACCTTGAAGTGCGGACGGTCCTTCGAGAGACCCGTCAAAAATACTATCC
TGCTTTGACAGCCATGGCAGGCAAAGGTTGGGTTGACCATTGGCTGGGGA
AGGTGTTCAAgtaagtgagggagggaggtagggaggtagggagggagggt
cgtaaagtgagggaagagggagagaaggggccttccacgacaatcacgct
tgtctgcttgtcaatccgccctacagagatgcgtcgggcttcataattga
aagcgaatcaaggaggggcgagaagggctggtatttcttgaatcatcttt
tcgatgtcatgcatttcattcacctctcctttgttttccttatcattccc
ccatggcacagGAATGACCTCGTCGGAATCAAAACATTTAATGACCGTGT
AACGTTTAAGGATCGCACGGGGATTAGCCACAGATCTTATAAAAACTGCT
TGACGCCgtaaggatgcctttttagtgtgggggtagagacgaagaggcgc
caccatcctttacccgttcaacccaagtatctcacaaagtttcatatgtg
gtaatattcttcatttacgtacctttacagATTGGGGGCTAATATGAATC
GGGAGATGTACTTGATGGCGAAGATGCTCCTTGACAAGGGACATCCCATT
GAGGAGGTATACCATATCACTCGAAAGTCGATGCTTGCAGTCCAGAAGGG
CTACAATTGTTGCCGACGCCTGAAGAAAAGGGACAAGATGCGGATGATGA
CCCGTCCTGGCTCCAGGAAGgtacgctttgcctctcactgatattaaaag
tccagaaaagcggctttttctttttcccctagctattgatatagcacgtt
caagaaaaccatcgttgacgcggagaaacttataccttgaatgcaatgat
agtctgaatcccggctctctccttcttcttcccttcacaaaatactcaat
agCGCCGACAGCTGCAGCTTGCAAACGAGCCGACGAACGTGCGTCCTTGC
ACCCGCGCACTCGCCTCCATGCGGCCCCCGGCTACCCCCATGATGCGCCC
GGAAGAAAATCAGTACGAGACGGAGGATGAGGAGTACAACTAA
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protein sequence of NO21G00790.1

>NO21G00790.1-protein ID=NO21G00790.1-protein|Name=NO21G00790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=322bp
MNTVTDEKPLSQKVVRELFFAYRWEMRNRECCIPVDIVATHLAVPVGLLQ
SLISGNNGFHWSDYCSGGPSEIHLECPKTKQVHLCWNNASHLLLSFKGML
KLVSLIQDNEVAANVRNYLCNTLEDEFARIEAAHDSTLRLLADDLEVRTV
LRETRQKYYPALTAMAGKGWVDHWLGKVFKNDLVGIKTFNDRVTFKDRTG
ISHRSYKNCLTPLGANMNREMYLMAKMLLDKGHPIEEVYHITRKSMLAVQ
KGYNCCRRLKKRDKMRMMTRPGSRKRRQLQLANEPTNVRPCTRALASMRP
PATPMMRPEENQYETEDEEYN*
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Synonyms
Publications