NO21G00790.1, NO21G00790.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO21G00790.1
Unique NameNO21G00790.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length966
Alignment locationchr21:266354..268096 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:266354..268096 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G00790.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G00790NO21G00790Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO21G00790.1NO21G00790.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO21G00790.1.cds1NO21G00790.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO21G00790.1.cds2NO21G00790.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO21G00790.1.cds3NO21G00790.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO21G00790.1.cds4NO21G00790.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO21G00790.1.cds5NO21G00790.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO21G00790.1 ID=NO21G00790.1|Name=NO21G00790.1|organism=Nannochloropsis oceanica|type=mRNA|length=966bp
ATGAACACTGTCACCGATGAAAAGCCGCTTTCTCAGAAAGTAGTCAGAGA
ACTCTTTTTTGCTTATCGGTGGGAGATGAGAAACAGGGAATGCTGCATTC
CCGTAGACATCGTGGCTACGCATCTGGCCGTCCCTGTGGGGTTATTGCAG
TCCCTCATATCCGGCAACAATGGCTTCCATTGGTCCGATTACTGCAGCGG
AGGACCCAGTGAGATTCATTTAGAGTGTCCCAAGACAAAGCAGGTGCACC
TGTGCTGGAACAATGCCTCCCATCTCCTCCTCTCTTTCAAGGGCATGTTG
AAGCTGGTATCCCTTATACAGGACAACGAAGTGGCGGCAAACGTCCGTAA
CTACCTGTGCAACACTTTAGAGGACGAGTTTGCGCGGATCGAAGCCGCGC
ACGACAGCACCCTTCGCTTGTTGGCGGATGACCTTGAAGTGCGGACGGTC
CTTCGAGAGACCCGTCAAAAATACTATCCTGCTTTGACAGCCATGGCAGG
CAAAGGTTGGGTTGACCATTGGCTGGGGAAGGTGTTCAAGAATGACCTCG
TCGGAATCAAAACATTTAATGACCGTGTAACGTTTAAGGATCGCACGGGG
ATTAGCCACAGATCTTATAAAAACTGCTTGACGCCATTGGGGGCTAATAT
GAATCGGGAGATGTACTTGATGGCGAAGATGCTCCTTGACAAGGGACATC
CCATTGAGGAGGTATACCATATCACTCGAAAGTCGATGCTTGCAGTCCAG
AAGGGCTACAATTGTTGCCGACGCCTGAAGAAAAGGGACAAGATGCGGAT
GATGACCCGTCCTGGCTCCAGGAAGCGCCGACAGCTGCAGCTTGCAAACG
AGCCGACGAACGTGCGTCCTTGCACCCGCGCACTCGCCTCCATGCGGCCC
CCGGCTACCCCCATGATGCGCCCGGAAGAAAATCAGTACGAGACGGAGGA
TGAGGAGTACAACTAA
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protein sequence of NO21G00790.1

>NO21G00790.1-protein ID=NO21G00790.1-protein|Name=NO21G00790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=322bp
MNTVTDEKPLSQKVVRELFFAYRWEMRNRECCIPVDIVATHLAVPVGLLQ
SLISGNNGFHWSDYCSGGPSEIHLECPKTKQVHLCWNNASHLLLSFKGML
KLVSLIQDNEVAANVRNYLCNTLEDEFARIEAAHDSTLRLLADDLEVRTV
LRETRQKYYPALTAMAGKGWVDHWLGKVFKNDLVGIKTFNDRVTFKDRTG
ISHRSYKNCLTPLGANMNREMYLMAKMLLDKGHPIEEVYHITRKSMLAVQ
KGYNCCRRLKKRDKMRMMTRPGSRKRRQLQLANEPTNVRPCTRALASMRP
PATPMMRPEENQYETEDEEYN*
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mRNA from alignment at chr21:266354..268096-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO21G00790.1 ID=NO21G00790.1|Name=NO21G00790.1|organism=Nannochloropsis oceanica|type=mRNA|length=1743bp|location=Sequence derived from alignment at chr21:266354..268096- (Nannochloropsis oceanica)
ATGAACACTGTCACCGATGAAAAGCCGCTTTCTCAGAAAGTAGTCAGAGA
ACTCTTTTTTGCTTATCGGTGGGAGATGAGAAACAGGGAATGCTGCATTC
CCGTAGACATCGTGGCTACGCATCTGGCCGTCCCTGTGGGGTTATTGCAG
TCCCTCATATCCGGCAACAATGGCTTCCATTGGTCCGATTACTGCAGCGG
AGGACCCAGTGAGATTCATTTAGAGTGTCCCAAGACAAAGCAGGTGCACC
TGTGCTGGAACAATGCCTCCCATCTCCTCCTCTCTTTCAAGGGCATGTTG
TAAGTACCTCTCTCACATCGTTCTGAAAGAGGGCTGGGTCTTCTTCCTCC
TCTCGTAACCTTTGAATGTTACTCTGTCAGTCTCCTCGTTGCATTTACGG
TGTTATTTCATCGGCATGCCTTCATATCCTTCTCCGCTTCCTCATTTATA
TCATTTCTTGATTCATCTATGTATTAATGTCGCATTCATCTACTCGTCTA
CGTTGTCCTGTACAATACAGGAAGCTGGTATCCCTTATACAGGACAACGA
AGTGGCGGCAAACGTCCGTAACTACCTGTGCAACACTTTAGAGGACGAGT
TTGCGCGGATCGAAGCCGCGCACGACAGCACCCTTCGCTTGTTGGCGGAT
GACCTTGAAGTGCGGACGGTCCTTCGAGAGACCCGTCAAAAATACTATCC
TGCTTTGACAGCCATGGCAGGCAAAGGTTGGGTTGACCATTGGCTGGGGA
AGGTGTTCAAGTAAGTGAGGGAGGGAGGTAGGGAGGTAGGGAGGGAGGGT
CGTAAAGTGAGGGAAGAGGGAGAGAAGGGGCCTTCCACGACAATCACGCT
TGTCTGCTTGTCAATCCGCCCTACAGAGATGCGTCGGGCTTCATAATTGA
AAGCGAATCAAGGAGGGGCGAGAAGGGCTGGTATTTCTTGAATCATCTTT
TCGATGTCATGCATTTCATTCACCTCTCCTTTGTTTTCCTTATCATTCCC
CCATGGCACAGGAATGACCTCGTCGGAATCAAAACATTTAATGACCGTGT
AACGTTTAAGGATCGCACGGGGATTAGCCACAGATCTTATAAAAACTGCT
TGACGCCGTAAGGATGCCTTTTTAGTGTGGGGGTAGAGACGAAGAGGCGC
CACCATCCTTTACCCGTTCAACCCAAGTATCTCACAAAGTTTCATATGTG
GTAATATTCTTCATTTACGTACCTTTACAGATTGGGGGCTAATATGAATC
GGGAGATGTACTTGATGGCGAAGATGCTCCTTGACAAGGGACATCCCATT
GAGGAGGTATACCATATCACTCGAAAGTCGATGCTTGCAGTCCAGAAGGG
CTACAATTGTTGCCGACGCCTGAAGAAAAGGGACAAGATGCGGATGATGA
CCCGTCCTGGCTCCAGGAAGGTACGCTTTGCCTCTCACTGATATTAAAAG
TCCAGAAAAGCGGCTTTTTCTTTTTCCCCTAGCTATTGATATAGCACGTT
CAAGAAAACCATCGTTGACGCGGAGAAACTTATACCTTGAATGCAATGAT
AGTCTGAATCCCGGCTCTCTCCTTCTTCTTCCCTTCACAAAATACTCAAT
AGCGCCGACAGCTGCAGCTTGCAAACGAGCCGACGAACGTGCGTCCTTGC
ACCCGCGCACTCGCCTCCATGCGGCCCCCGGCTACCCCCATGATGCGCCC
GGAAGAAAATCAGTACGAGACGGAGGATGAGGAGTACAACTAA
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Coding sequence (CDS) from alignment at chr21:266354..268096-

>NO21G00790.1 ID=NO21G00790.1|Name=NO21G00790.1|organism=Nannochloropsis oceanica|type=CDS|length=966bp|location=Sequence derived from alignment at chr21:266354..268096- (Nannochloropsis oceanica)
ATGAACACTGTCACCGATGAAAAGCCGCTTTCTCAGAAAGTAGTCAGAGA
ACTCTTTTTTGCTTATCGGTGGGAGATGAGAAACAGGGAATGCTGCATTC
CCGTAGACATCGTGGCTACGCATCTGGCCGTCCCTGTGGGGTTATTGCAG
TCCCTCATATCCGGCAACAATGGCTTCCATTGGTCCGATTACTGCAGCGG
AGGACCCAGTGAGATTCATTTAGAGTGTCCCAAGACAAAGCAGGTGCACC
TGTGCTGGAACAATGCCTCCCATCTCCTCCTCTCTTTCAAGGGCATGTTG
AAGCTGGTATCCCTTATACAGGACAACGAAGTGGCGGCAAACGTCCGTAA
CTACCTGTGCAACACTTTAGAGGACGAGTTTGCGCGGATCGAAGCCGCGC
ACGACAGCACCCTTCGCTTGTTGGCGGATGACCTTGAAGTGCGGACGGTC
CTTCGAGAGACCCGTCAAAAATACTATCCTGCTTTGACAGCCATGGCAGG
CAAAGGTTGGGTTGACCATTGGCTGGGGAAGGTGTTCAAGAATGACCTCG
TCGGAATCAAAACATTTAATGACCGTGTAACGTTTAAGGATCGCACGGGG
ATTAGCCACAGATCTTATAAAAACTGCTTGACGCCATTGGGGGCTAATAT
GAATCGGGAGATGTACTTGATGGCGAAGATGCTCCTTGACAAGGGACATC
CCATTGAGGAGGTATACCATATCACTCGAAAGTCGATGCTTGCAGTCCAG
AAGGGCTACAATTGTTGCCGACGCCTGAAGAAAAGGGACAAGATGCGGAT
GATGACCCGTCCTGGCTCCAGGAAGCGCCGACAGCTGCAGCTTGCAAACG
AGCCGACGAACGTGCGTCCTTGCACCCGCGCACTCGCCTCCATGCGGCCC
CCGGCTACCCCCATGATGCGCCCGGAAGAAAATCAGTACGAGACGGAGGA
TGAGGAGTACAACTAA
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Synonyms
Publications