NO21G00750, NO21G00750 (gene) Nannochloropsis oceanica

Overview
NameNO21G00750
Unique NameNO21G00750
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2484
Alignment locationchr21:254324..256807 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:254324..256807 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
Homology
The following BLAST results are available for this feature:
BLAST of NO21G00750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL026nonsL026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR052ncniR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004717NSK004717Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G00750.1NO21G00750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G00750.1NO21G00750.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G00750 ID=NO21G00750|Name=NO21G00750|organism=Nannochloropsis oceanica|type=gene|length=2484bp
ATTCGATTCGCCGTTGAGGAAAACCATTTTTCCTCCACACGCACGCGCCA
CACTACGACACACGCACCGTGGTCGTGCACCTTTTAAGAACTTGATAGCG
GAATGTCAAGAATTTGTAGTCCGGTGTATTATTTCGTCCTGGCCTCCAAA
ATTATTTGGGACGCGCCGCACAATGCAATGGGCCGGTGTCTACTACTACG
TTGCCAACGCTTGTTCTCCTGCCATCCCTTCTCACCAGCCCTTACAAGAT
CGCACCCTCGAGACACAGTCCACAGCCAATAAAGAACAATTAAAACGCAA
TGAGCAGCGGGGCCGGCGCAGGTGGCGGTCGGGTGGACAAGCGTTCGTCG
TCATCTTCGTCCATGCTGGCGCGGGGCAAGGCGTTCTTGCGTAGCTTCTC
AGGTGGGGACCAGCCTATCGTTGCAGATGCCGCTGGCGGCAGCAGTGGCG
GCCAACCATCCCGTCAGCAGCTCTACCGCCAGCAGCCGCGTCTATCCGTC
CCTCCCGCACCGACGATGGTGAATGGAGCAGCAGCTGCAGGAGGAAGAGC
AAGGAAGAAAGGCATACTAGCTACCGTTGACTTCCCATGCACAGCAGCCG
AATCAGCATCAGCAGGAAATACGTCTTCTTGCCATTCGTCTTCTGCATCT
TCAGCGACTTGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
TTACAACCACGAGGGAGACCACCACCCCAACGACCAAGAGGAAGACGATG
ATCCGTTTGCCGGGCCAATCAGAGTTAAGATCACCACACCTTCCCGTGGC
GGCGAAGGGGAAGGAAGACTAGCTGCTTGGTTGGCCTCACCAAGGTTGCT
GCTGTCTAGAGGAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGG
AGGAGGAGGAATGGGAGGAAGGAGAGTGGGAGGGGGAGATAGATGTAGGA
GAAATAGATTATGGAGAGGAAGAAGATGAGGAAGATGAGGATGAGGCGCC
ATTTGACCCCCGCAAGGCTCACGAAACCTTTATCTGGCGAGCGCTGCAAG
GCTCGCCGGTGGTCGGAACTGGCAGCAACTCTGAATGTAGCAGCAGCAGC
AGCACCAGTGCAACCACGTCCACCCAATTTAGAAAGTCCCTGAAATGGGC
CGATGAGGACGGGGGCGAGCTGAATTGTGTGCAGTACTTCGACAAGAACG
CCGAGCCATCTCAGGTCCTCCGCATGATGCTTGCTGCCGATGCCCGTGCG
GAAGGCGCCCCTGGGAGTGGGCGAGCCGCCATGGGTCGGGATGACATTGT
CAAGAATCTTGAGCCGTACCTGAAGCAATTAAAAGGCAACGTCCGGGAGG
TCCAGCCGGTTAAACTCATGAGGAACGGTGAAACACGCGCGATACTGATA
GCCGGGAGGGGGCCCGTGAGGATGAGGGTGGGGGTAGGCATTGTGTGGAT
GGGCGGTCTAATCAAACACCTGAGAATGATTAAGAACCCCTCCGCCGAAT
TTTTAGAAGACGAGGCTCTCCGTTCCTCCCTCCCTCCCTCCCTGCCCCCT
CCATCTGTGGTGGCCGCCGGACGCCCTATTCCTCCTCCTCTCCCTTCCCG
CGGTGGGACAGCAGCACCATCACCTTGCCACGAGCAGCACCACCCTTCCT
CCCCTTCCTCCTCCTCGCCCCCCTTCACCACCCCCCGATCCACCGAATCC
GAGCTCCTCCTCCTCTCCCCCCCCTACCTCATTCCTCGCCCTGCGTCCTT
CCCTCCCCCCACCCTGACCGTTCAAGTCATATCAGCCCTCAATCTGAAGA
GCTCGGCCCAATTGCCACGACCGGTCAATCCTTACGTAAAATTAAGGCTG
GGAGGAAGGGAGGGAAGGACGAATGTGCTGACCAACACCAAGAACCCTGT
GTGGGCGGGTACGAGGGAGGGCCTGCTTAGAGGAGTAGGAGTAGGAGGAA
GAGGAGGAGGAGGAGGGGAGGGGGTAGGAGGAGGAGGGAATGTCTTCCGT
TTTCCGGCCGAGGACCCAAATGCCTTGTTGAAGGTGACAGTGGGGGATTG
GAAGCTAGGAAAAAACGTGTGGATTGCGCGCCTGGCCATTCCCCTGGCAT
CGATCGAAGTCTGCCCCCCCACCTCCGCCCTCCAGCCCTCCTTTAAGAGG
CCAGGACGCGGCGGAGGACAAGGGGGGGGGAGGACGTGATGGAGGGAGGG
GTGACGAAGGAATTTCAATTGCGTCTGCGTGTGTCGAGGTTCGGGACGAG
GATCGAAAAGGAGGGGGTCAGCGAGGCCAAGTTAACGCTGAAATTAAAAT
ATGAATTCTGGGAACGATCGTGGACCCTGGACGAGCTGAAAGCACGGGAC
GAAGAGAGGCTGAGGCAGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAAAG
GGGGAGGAGCGGAGGAGTGGCCGTGGCTGGAGGATGGAGGAGAGAGGGAG
GAAAAGGAGGGAGGGGAAGAGGGAGGGAGGGGGC
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protein sequence of NO21G00750.1

>NO21G00750.1-protein ID=NO21G00750.1-protein|Name=NO21G00750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=630bp
MSSGAGAGGGRVDKRSSSSSSMLARGKAFLRSFSGGDQPIVADAAGGSSG
GQPSRQQLYRQQPRLSVPPAPTMVNGAAAAGGRARKKGILATVDFPCTAA
ESASAGNTSSCHSSSASSATCQQQQQQQQQQQQHYNHEGDHHPNDQEEDD
DPFAGPIRVKITTPSRGGEGEGRLAAWLASPRLLLSRGEQQQQQQQQQQE
EEEEWEEGEWEGEIDVGEIDYGEEEDEEDEDEAPFDPRKAHETFIWRALQ
GSPVVGTGSNSECSSSSSTSATTSTQFRKSLKWADEDGGELNCVQYFDKN
AEPSQVLRMMLAADARAEGAPGSGRAAMGRDDIVKNLEPYLKQLKGNVRE
VQPVKLMRNGETRAILIAGRGPVRMRVGVGIVWMGGLIKHLRMIKNPSAE
FLEDEALRSSLPPSLPPPSVVAAGRPIPPPLPSRGGTAAPSPCHEQHHPS
SPSSSSPPFTTPRSTESELLLLSPPYLIPRPASFPPPTLTVQVISALNLK
SSAQLPRPVNPYVKLRLGGREGRTNVLTNTKNPVWAGTREGLLRGVGVGG
RGGGGGEGVGGGGNVFRFPAEDPNALLKVTVGDWKLGKNVWIARLAIPLA
SIEVCPPTSALQPSFKRPGRGGGQGGGRT*
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Synonyms
Publications