NO21G00550, NO21G00550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO21G00550 vs. NCBI_GenBank
Match: EWM22548.1 (hypothetical protein Naga_100378g3 [Nannochloropsis gaditana]) HSP 1 Score: 166.4 bits (420), Expect = 3.800e-37 Identity = 107/219 (48.86%), Postives = 135/219 (61.64%), Query Frame = 0 Query: 597 LCKAELLSRIGRVFLQMGNLQEARRFFAHAEIXXXXXXXXXXXXXXXXXXXXXXVATTGDNIDPPSRXXXXXXXPLGWAEAQVGMGRGLMAVAEGRWEEARQSFEGVAAAERTRLAEAPFIFTSSDSSFLPSSXXXXXXXXXXWPYL--------LLPSPDETLLPPALTNLAVLALYRGDVHKAIAILESFLKDDPPRNMTESLLLNLSYLYELVGDK 808 + + E+L RIGRVFLQ+GN+QEARRF+ HAEI A PP XXXXXX LGWAE+QVGMG+GL+AVAEGRWE+A+++F+ VAAAERTRL E PF+F D + PS P+L + NLAVL+L+RG+VH AI ILE+F+++DPPRNMTE+L+LNLSY Y+LVGDK Sbjct: 1 MAQVEVLQRIGRVFLQVGNVQEARRFWNHAEILVLKAKSCALSAQQFSSQGHEEQAMPA---FPPPXXXXXXXYFLGWAESQVGMGKGLLAVAEGRWEDAQRNFQKVAAAERTRLLEDPFVF---DPALSPSPGSSGPTAP---PFLSXXXXXXXXXXXXXXXXXXXXIINLAVLSLHRGNVHAAIHILENFIREDPPRNMTENLVLNLSYFYDLVGDK 210
BLAST of NO21G00550 vs. NCBI_GenBank
Match: EWM22551.1 (hypothetical protein Naga_101173g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 94.7 bits (234), Expect = 1.400e-15 Identity = 61/150 (40.67%), Postives = 72/150 (48.00%), Query Frame = 0 Query: 300 RISELTDVFLKSSGGVLPDPEGFKSRRGLLALCKMRAWRTVLEVSEDVMMRKEGG-------GXXXXXXXXXXXXXICTFLALRKXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVGRMPLQLLFLVADAWVWLGEGEEAERAFATLRKRV 443 RIS LTD FL S GVLP PEGF+SRRGL+ALC+MRAW+TVLEV++ R GG G +FLALR G PL L L ADAWVWLGE E+A +++RV Sbjct: 273 RISHLTDHFLAESSGVLPHPEGFRSRRGLVALCRMRAWKTVLEVTD----RLTGGEGENGREGGEEEEVESMMDVVTSSFLALRGLGRRQAVKARLERMR---------------GEAPLPFLLLAADAWVWLGEEEKACDVLYRMQRRV 403
BLAST of NO21G00550 vs. NCBI_GenBank
Match: GAX28415.1 (hypothetical protein FisN_4Hh394 [Fistulifera solaris]) HSP 1 Score: 87.0 bits (214), Expect = 2.900e-13 Identity = 88/319 (27.59%), Postives = 140/319 (43.89%), Query Frame = 0 Query: 511 PAEVRWWLAKADLSLLTLHLSQKSWRNALVILERVRRSLEQDLLEAQEGQGGKEGEQTPSSSSFASPMTQSGREGGQPSASLPLLILCKAELLSRIGRVFLQMGNLQEARRFFAHAEIXXXXXXXXXXXXXXXXXXXXXXVATTGDNIDPPSRXXXXXXXPLGWAEAQVGMGRGLMAVAEGRWEEARQSFEGVAAAERTRLAEAPFIFTSSDSSFLPSSXXXXXXXXXXWPYLLLPSPDETLLPPALTNLAVLALYRGDVHKAIAILESFLKDDPPRNMTESLLLNLSYLYELVGDKACREEKMKVLETVARRFRLDDI 830 PAE + + +L L K WR AL ER+ DLL Q Q S+ +P+ + A+ L + E+LS+ GRVFLQ+G EAR+ F A AT G + + P + A + + GL+ +EG++ EA + F R R+ E SS+S + + P +P++ L A+ N+++ ALY ++H+AI ++ES +++DP + +TE + LNL LYEL + + +K KVL+ +A+RF L DI Sbjct: 283 PAENFLSQLQVEHALSNSFLRLKDWRMALSCQERM-----LDLLPNACQQ------QVQLSAETTNPLAE--------KAAAALQGAYRCEILSQQGRVFLQLGATNEARQIFDMAR----------------------DAATHGSVAEETMQVMRHSLVP--FVPAHMSLNDGLLKFSEGQYNEALECFRHCVDLIRQRI-EMKSAVASSNSFDMKALI----------PMPTGAAPEDALYSEAINNMSLCALYTCNLHEAILLMESLIREDPIKFLTERVCLNLCILYELSNETSMAAKKKKVLQLIAKRFMLHDI 547
BLAST of NO21G00550 vs. NCBI_GenBank
Match: GAX19413.1 (hypothetical protein FisN_4Lh394 [Fistulifera solaris]) HSP 1 Score: 85.9 bits (211), Expect = 6.500e-13 Identity = 84/321 (26.17%), Postives = 139/321 (43.30%), Query Frame = 0 Query: 511 PAEVRWWLAKADLSLLTLHLSQKSWRNALVILERVRRSLEQDLLEAQEGQGGKEGEQTPSSSSFASPMTQSGREGGQPSASLPLLILCKAELLSRIGRVFLQMGNLQEARRFFAHAEIXXXXXXXXXXXXXXXXXXXXXXVATTGDNIDPPSRXXXXXXXPLGWAEAQVGMGRGLMAVAEGRWEEARQSFEGVA--AAERTRLAEAPFIFTSSDSSFLPSSXXXXXXXXXXWPYLLLPSPDETLLPPALTNLAVLALYRGDVHKAIAILESFLKDDPPRNMTESLLLNLSYLYELVGDKACREEKMKVLETVARRFRLDDI 830 PAE + + +L + K WR AL ER+ DLL Q Q S+ +P+T+ Q + + E+LS+ GR+FLQ+G EAR+ F A V+ T + + + + A + + GL+ +EG++ EA + F ++R + A SS+ L P +P+E L A+ N+++ ALY ++H+AI ++ES +++DP + +TE + LNL LYEL + + +K KVL+ +A+RF L DI Sbjct: 283 PAEDFLSQLQVEHALSNSFIRLKDWRMALSCQERM-----LDLLPNACQQ------QAQLSAETTNPLTEKTAAAFQGA--------YRCEILSQQGRIFLQLGATHEARQIFDMAR------------------DAATHVSVTEETVQ------LMRHSIVPFIPAHISLNNGLLKFSEGQYNEALECFRHCVDLISQRIEMKSAVASLNSSEVKVL-------------IPMPTGAAPEEALYSEAINNMSLCALYTCNLHEAILLMESLIREDPTKFLTERVCLNLCILYELSNETSMAAKKKKVLQVIAKRFMLHDI 547
BLAST of NO21G00550 vs. NCBI_GenBank
Match: XP_005853431.1 (hypothetical protein NGA_0455800 [Nannochloropsis gaditana CCMP526] >EKU22928.1 hypothetical protein NGA_0455800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 82.8 bits (203), Expect = 5.500e-12 Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 0 Query: 789 MTESLLLNLSYLYELVGDKACREEKMKVLETVARRFRLDDIEARFFS 836 MTE+L+LNLSY Y+LVGDKA R+EKMKVLE VARRFRLDDIEARFFS Sbjct: 1 MTENLVLNLSYFYDLVGDKASRDEKMKVLEAVARRFRLDDIEARFFS 47
BLAST of NO21G00550 vs. NCBI_GenBank
Match: CBN77140.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 78.2 bits (191), Expect = 1.400e-10 Identity = 72/254 (28.35%), Postives = 107/254 (42.13%), Query Frame = 0 Query: 581 SGREGGQPSASLPLLILCKAELLSRIGRVFLQMGNLQEARRFFAHAEIXXXXXXXXXXXXXXXXXXXXXXVATTGDNIDPPSRXXXXXXXPLGWAEAQVGMGRGLMAVAEGRWEEARQSFEGVAAAERTRLAEAPFIFTSSDSSFLPSSXXXXXXXXXXWPYLLLPSPDETLLPPALTNLAVLALYRGDVHKAIAILESFLKDDPPRNMTESLLLNLSYLYELVGDKACREEKMKVLETVARRFRLDDIEARFF 835 +G EG + S + ELLSRIGRVFLQ G+L++A +F AE A G N ++ + RGL+ + + A+++F AA E LA SD ++L W L LL AL NL++ +Y DV + + LE ++ DP M + ++ NL LY+L D +K + L+ VA+RFRL+DI+A F Sbjct: 138 AGEEGARASVD-----NVRVELLSRIGRVFLQFGSLEDAEVYFRRAE---------------------AAAAVAGSN-------------------PRILVNRGLLDFSRNEFVAAQENFRN-AATEAAMLAAKEEPPDGSDDNWL-------------WATL---DQGAGLLDAALNNLSLAMVYSCDVLRGVRTLEGLIRKDPRLYMLDVVIFNLCTLYDLSFDAVASAKKKRTLQAVAQRFRLEDIDASSF 329
BLAST of NO21G00550 vs. NCBI_GenBank
Match: XP_002179682.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48668.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 78.2 bits (191), Expect = 1.400e-10 Identity = 85/319 (26.65%), Postives = 128/319 (40.13%), Query Frame = 0 Query: 518 LAKADLSLLTLHLSQKSWRNALVILERVRRSLEQDLLEAQEGQGGKEGEQTPSSSSFASPMTQSGREGGQPSASLPLLILCKAELLSRIGRVFLQMGNLQEARRFFAHAEIXXXXXXXXXXXXXXXXXXXXXXVATTGDNIDPPSRXXXXXXXPLGWAEAQVGMGRGLMAVAEGRWEEARQSFEGVAAAERTRLAEAPFIFTSSDSSFLPSSXXXXXXXXXXWPYLLLPSPD--ETLLPPALTNLAVLALYRGDVHKAIAILESFLKDDPPRNMTESLLLNLSYLYELVGDKACREEKMKVLETVARRFRLDDIEARFF 835 L + + L + + ++ WR A+ LER ++EA +G E E +G + A+L L ++E+LSR GR+ LQ G + EA + F A V D D Q+ GL+ A G+++EA + F A ER R + S D W +L S + E L L NLA+ ALY + KAI ++ES +++DP R +TE + +NL LYEL D A + + L+ +A+RF L DI F Sbjct: 314 LLQVEHVLSNIFVQRQEWRMAVACLER--------MMEALDGLVANEVETLV-------------EKGQRSVAALVLKYAYQSEILSRQGRILLQAGAVSEAAQIFQQAS----------------------DVWNALD--DTAKEGVLSKHVATRHVPCQLLSNEGLVCFAYGKYDEALEFFR--QATERMRANQCTVPEYSRDD----------------WVGFVLVSNETYEGLYSQVLNNLALCALYTSRLQKAIQVMESLIREDPTRYLTERVAMNLCTLYELGADTAVAARQKRTLQIIAKRFLLQDIGPECF 569
BLAST of NO21G00550 vs. NCBI_GenBank
Match: OQS05633.1 (hypothetical protein THRCLA_02269 [Thraustotheca clavata]) HSP 1 Score: 66.6 bits (161), Expect = 4.100e-7 Identity = 58/232 (25.00%), Postives = 99/232 (42.67%), Query Frame = 0 Query: 603 LSRIGRVFLQMGNLQEARRFFAHAEIXXXXXXXXXXXXXXXXXXXXXXVATTGDNIDPPSRXXXXXXXPLGWAEAQVGMGRGLMAVAEGRWEEARQSFEGVAAAERTRLAEAPFIFTSSDSSFLPSSXXXXXXXXXXWPYLLLPSPDETLLPPALTNLAVLALYRGDVHKAIAILESFLKDDPPRNMTESLLLNLSYLYELVGDKACREEKMKVLETVARRFRLDDIEARFF 835 LSR+GR+ LQMGNL A + F A W A++ + +GL+ A+ +++EA +F + T P ++ S P+L + D ++ A NLA+ ALY +VH A+ +LES L+ DP R++ +++ NLS LY+LV D A + ++++ VA + ++ I++ F Sbjct: 384 LSRVGRIHLQMGNLVGAEQVFMRAS-------------------------------------SIPFDAEYDWT-ARLHLNQGLLYFAQNKFKEALDTFNTILQLYCT---PEPVMYASD-------------------PFLSIDDGD--VVSCAANNLAICALYSCEVHTAVTVLESVLQGDPVRHLHSAIVFNLSTLYDLVCDNANATNRKEMIKRVAEAYAIEHIDSSSF 553 The following BLAST results are available for this feature:
BLAST of NO21G00550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO21G00550 ID=NO21G00550|Name=NO21G00550|organism=Nannochloropsis oceanica|type=gene|length=3148bpback to top protein sequence of NO21G00550.1 >NO21G00550.1-protein ID=NO21G00550.1-protein|Name=NO21G00550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=836bpback to top Synonyms
Publications
|