NO21G00520, NO21G00520 (gene) Nannochloropsis oceanica

Overview
NameNO21G00520
Unique NameNO21G00520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2931
Alignment locationchr21:180056..182986 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:180056..182986 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036427Bromodomain-like_sf
IPR001487Bromodomain
Homology
[Close]
BLAST of NO21G00520 vs. NCBI_GenBank
Match: CBN76069.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 94.0 bits (232), Expect = 2.300e-15
Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 0 
Query:  412 ICMRVWNKANQHRVAGTFRHPVNEDDAPGYHKVIKEPLDLYLIKRRIDDGTIGSVSALGRALGVMCGNAMVFNNNDTPEYENAEILSKFCQEKIEEAK 510
            I + VW++  +H+ A  FR  VN  DAPGY ++IKEP+DL LI+ RI  G + S+  + R L VMC NAMVFN  D P ++ ++ L  +  E IEEA+
Sbjct:  300 IALEVWDRVYRHKFAIIFRKAVNPKDAPGYEEIIKEPMDLSLIRERIMSGALLSLDDMSRDLCVMCNNAMVFNGKDDPYFDYSKELRTYANEVIEEAR 397
[Close]
BLAST of NO21G00520 vs. NCBI_GenBank
Match: XP_015775708.1 (PREDICTED: bromodomain-containing protein 8-like isoform X1 [Acropora digitifera])

HSP 1 Score: 81.3 bits (199), Expect = 1.600e-11
Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 0 
Query:  414 MRVWNKANQHRVAGTFRHPVNEDDAPGYHKVIKEPLDLYLIKRRIDDGTIGSVSALGRALGVMCGNAMVFNNNDTPEYENAEILSKFCQEKIE 507
            M VW  A  H+ A  F HPV +D+APGYH V+  P+DL  IK+ I++GTI + S   R + +M  NA+++N+ D   Y  AE +     E+I+
Sbjct:  776 MLVWRAAANHKYANVFLHPVTDDEAPGYHSVVFRPMDLSTIKKNIENGTIRTTSEFQRDMMLMFQNALMYNSADHDVYRMAEEMRDDVMEQIQ 868
[Close]
BLAST of NO21G00520 vs. NCBI_GenBank
Match: XP_015775709.1 (PREDICTED: bromodomain-containing protein 8-like isoform X2 [Acropora digitifera])

HSP 1 Score: 81.3 bits (199), Expect = 1.600e-11
Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 0 
Query:  414 MRVWNKANQHRVAGTFRHPVNEDDAPGYHKVIKEPLDLYLIKRRIDDGTIGSVSALGRALGVMCGNAMVFNNNDTPEYENAEILSKFCQEKIE 507
            M VW  A  H+ A  F HPV +D+APGYH V+  P+DL  IK+ I++GTI + S   R + +M  NA+++N+ D   Y  AE +     E+I+
Sbjct:  775 MLVWRAAANHKYANVFLHPVTDDEAPGYHSVVFRPMDLSTIKKNIENGTIRTTSEFQRDMMLMFQNALMYNSADHDVYRMAEEMRDDVMEQIQ 867
[Close]
BLAST of NO21G00520 vs. NCBI_GenBank
Match: XP_015775710.1 (PREDICTED: bromodomain-containing protein 8-like isoform X3 [Acropora digitifera])

HSP 1 Score: 81.3 bits (199), Expect = 1.600e-11
Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 0 
Query:  414 MRVWNKANQHRVAGTFRHPVNEDDAPGYHKVIKEPLDLYLIKRRIDDGTIGSVSALGRALGVMCGNAMVFNNNDTPEYENAEILSKFCQEKIE 507
            M VW  A  H+ A  F HPV +D+APGYH V+  P+DL  IK+ I++GTI + S   R + +M  NA+++N+ D   Y  AE +     E+I+
Sbjct:  774 MLVWRAAANHKYANVFLHPVTDDEAPGYHSVVFRPMDLSTIKKNIENGTIRTTSEFQRDMMLMFQNALMYNSADHDVYRMAEEMRDDVMEQIQ 866
[Close]
BLAST of NO21G00520 vs. NCBI_GenBank
Match: XP_015775711.1 (PREDICTED: bromodomain-containing protein 8-like isoform X4 [Acropora digitifera])

HSP 1 Score: 81.3 bits (199), Expect = 1.600e-11
Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 0 
Query:  414 MRVWNKANQHRVAGTFRHPVNEDDAPGYHKVIKEPLDLYLIKRRIDDGTIGSVSALGRALGVMCGNAMVFNNNDTPEYENAEILSKFCQEKIE 507
            M VW  A  H+ A  F HPV +D+APGYH V+  P+DL  IK+ I++GTI + S   R + +M  NA+++N+ D   Y  AE +     E+I+
Sbjct:  776 MLVWRAAANHKYANVFLHPVTDDEAPGYHSVVFRPMDLSTIKKNIENGTIRTTSEFQRDMMLMFQNALMYNSADHDVYRMAEEMRDDVMEQIQ 868
[Close]
BLAST of NO21G00520 vs. NCBI_GenBank
Match: XP_015775712.1 (PREDICTED: bromodomain-containing protein 8-like isoform X5 [Acropora digitifera])

HSP 1 Score: 81.3 bits (199), Expect = 1.600e-11
Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 0 
Query:  414 MRVWNKANQHRVAGTFRHPVNEDDAPGYHKVIKEPLDLYLIKRRIDDGTIGSVSALGRALGVMCGNAMVFNNNDTPEYENAEILSKFCQEKIE 507
            M VW  A  H+ A  F HPV +D+APGYH V+  P+DL  IK+ I++GTI + S   R + +M  NA+++N+ D   Y  AE +     E+I+
Sbjct:  619 MLVWRAAANHKYANVFLHPVTDDEAPGYHSVVFRPMDLSTIKKNIENGTIRTTSEFQRDMMLMFQNALMYNSADHDVYRMAEEMRDDVMEQIQ 711
[Close]
BLAST of NO21G00520 vs. NCBI_GenBank
Match: XP_020629187.1 (bromodomain-containing protein 8-like isoform X3 [Orbicella faveolata])

HSP 1 Score: 81.3 bits (199), Expect = 1.600e-11
Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = 0 
Query:  414 MRVWNKANQHRVAGTFRHPVNEDDAPGYHKVIKEPLDLYLIKRRIDDGTIGSVSALGRALGVMCGNAMVFNNNDTPEYENAEILSKFCQEKIE 507
            M VW  A  H+ A  F HPV +D+APGYH ++  P+DL  IK+ I++GTI + S   R + +M  NA+++N+ D   Y  AE +     E+I+
Sbjct:  786 MLVWRAAANHKYANVFLHPVTDDEAPGYHSIVFRPMDLLTIKKNIENGTIRTTSEFQRDMMLMFQNALMYNSADHDVYRMAEEMRDDVMEQIQ 878
[Close]
BLAST of NO21G00520 vs. NCBI_GenBank
Match: PFX21468.1 (Tetratricopeptide repeat protein 28 [Stylophora pistillata])

HSP 1 Score: 81.3 bits (199), Expect = 1.600e-11
Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = 0 
Query:  414 MRVWNKANQHRVAGTFRHPVNEDDAPGYHKVIKEPLDLYLIKRRIDDGTIGSVSALGRALGVMCGNAMVFNNNDTPEYENAEILSKFCQEKIE 507
            M VW  A  H+ A  F HPV +D+APGYH ++  P+DL  IK+ I++GTI + S   R + +M  NA+++N+ D   Y  AE +     E+I+
Sbjct:  876 MLVWRAAANHKYANVFLHPVTDDEAPGYHSIVFRPMDLSTIKKNIENGTIRTTSEFQRDMMLMFQNALMYNSADHDVYRMAEEMGDDVMEQIQ 968
[Close]
BLAST of NO21G00520 vs. NCBI_GenBank
Match: XP_022797208.1 (bromodomain-containing protein 8-like [Stylophora pistillata])

HSP 1 Score: 81.3 bits (199), Expect = 1.600e-11
Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = 0 
Query:  414 MRVWNKANQHRVAGTFRHPVNEDDAPGYHKVIKEPLDLYLIKRRIDDGTIGSVSALGRALGVMCGNAMVFNNNDTPEYENAEILSKFCQEKIE 507
            M VW  A  H+ A  F HPV +D+APGYH ++  P+DL  IK+ I++GTI + S   R + +M  NA+++N+ D   Y  AE +     E+I+
Sbjct:  779 MLVWRAAANHKYANVFLHPVTDDEAPGYHSIVFRPMDLSTIKKNIENGTIRTTSEFQRDMMLMFQNALMYNSADHDVYRMAEEMGDDVMEQIQ 871
[Close]
BLAST of NO21G00520 vs. NCBI_GenBank
Match: XP_020629186.1 (bromodomain-containing protein 8-like isoform X2 [Orbicella faveolata])

HSP 1 Score: 80.5 bits (197), Expect = 2.700e-11
Identity = 38/96 (39.58%), Postives = 57/96 (59.38%), Query Frame = 0 
Query:  414 MRVWNKANQHRVAGTFRHPVNEDDAPGYHKVIKEPLDLYLIKRRIDDGTIGSVSALGRALGVMCGNAMVFNNNDTPEYENAEILSKFCQEKIEEAK 510
            M VW  A  H+ A  F HPV +D+APGYH ++  P+DL  IK+ I++GTI + S   R + +M  NA+++N+ D   Y  AE +     E+I+  K
Sbjct:  738 MLVWRAAANHKYANVFLHPVTDDEAPGYHSIVFRPMDLLTIKKNIENGTIRTTSEFQRDMMLMFQNALMYNSADHDVYRMAEEMRDDVMEQIQVDK 833
The following BLAST results are available for this feature:
BLAST of NO21G00520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN76069.12.300e-1545.92conserved unknown protein [Ectocarpus siliculosus][more]
XP_015775708.11.600e-1140.86PREDICTED: bromodomain-containing protein 8-like i... [more]
XP_015775709.11.600e-1140.86PREDICTED: bromodomain-containing protein 8-like i... [more]
XP_015775710.11.600e-1140.86PREDICTED: bromodomain-containing protein 8-like i... [more]
XP_015775711.11.600e-1140.86PREDICTED: bromodomain-containing protein 8-like i... [more]
XP_015775712.11.600e-1140.86PREDICTED: bromodomain-containing protein 8-like i... [more]
XP_020629187.11.600e-1139.78bromodomain-containing protein 8-like isoform X3 [... [more]
PFX21468.11.600e-1139.78Tetratricopeptide repeat protein 28 [Stylophora pi... [more]
XP_022797208.11.600e-1139.78bromodomain-containing protein 8-like [Stylophora ... [more]
XP_020629186.12.700e-1139.58bromodomain-containing protein 8-like isoform X2 [... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR052ncniR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G00520.1NO21G00520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|267821gene_9483Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G00520.1NO21G00520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G00520 ID=NO21G00520|Name=NO21G00520|organism=Nannochloropsis oceanica|type=gene|length=2931bp
ATGGCTCCTGCCCCGACGGCCAACAGCACCGACCACCCCACCACCAGCAT
CACGGCAAGCACCATGGATGTGAAGGAGCTTCAGGCAGAGCTCTCCGAGA
TGGACGACTGTGTCAAATTCATGCAAGAAGAGATTGATATGCTTAAAAGC
GGGGCCTTAGACAGAAGGTTGAAGGAGGTAGGGGCGTATTCAGTCCCTGC
TACTTATAAGCGAGTCTTGGCTTTGGTAGAATTCCCTCCTCCCCCTGAGG
GACGAGAAAGTGGGAGTGAGGAAGGGGAAGAGGAGGAGGAAGGGAGCGCG
GCTGACAGTGAAGACGAGGAGGGGGGAGGGAGCGAGGAAGAAAGTGAAGA
GGGCAGTGAGGATGATGAGAGGGAAGAGGAAGACAAGAAGGTGGTGCCTC
GTTCCCGGAGGGGAAGTAGGGCGACAGAGCTGGACGAAAGCGATGCCGAA
GAGGAGGAAGGGGAGGGCGGAGAGGCGGGAGAGGAGGACGAAGGAGAAGG
GGGAGAAGATGGAGAAGAGAGGAGTGTGACCAGCAAGGGTGGGAGGGTAA
GGCGAGAGAGGGGGCCCAAAGCGGGGAGGAATGGAGTGAGGGAGGGTCGA
GGTGGTGGGGGAGGAGAGGGAGGTAAAAGCATGAGTGGTGCCAGTAGCGT
GGGCAGCACGGGAAGTAAGTCTGCAGCGAGGACAAAAAGAGGCATCTCTT
CGAGAACTGGGGGAGGAGGAGGGAGGAGGAGGAGGAGGAGAGGGGACGAA
GGAGGGAGTGACGAGGAGGCGGCGGAGGAGGGAGGGGAGCAGGAGGGGTT
GGAGGAGAGTGATGCCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGGAGCGGGACAAGAAGAGGAGGAG
GAGGAGGTCGAAGAGGAGGGCAGTCGTCGTGGGCGTCGGAAACGGGCGGG
GGGCAAGCCAACTGCTGCTGCTGCTGCTGCTGGCAAGAAGGGTGTAAAGA
AAGAAAAGCAAGGTGAGGAGGAGGAGGAAGAAGATGAAGAGGAAGAGGAG
GAGGAGGAGAAGGAGGAGGAAGAGGGAAATGAAGCCGAATCGGTCGCAAG
AGGGAAAAAACGCGTTTTAGCCCACAATAGAAAAGCAGCAGCTGCTGCTT
CTGATCCTCCTACCGCTACCAACTCCTCCTCCTCGGGAGGTGGTCGTCCC
TCCCTCCCTCCATTGGCTGCGGCCAAACGCCGCATATGCATGCGTGTGTG
GAACAAGGCTAACCAACACCGTGTCGCTGGGACGTTTCGACACCCAGTCA
ACGAGGACGACGCCCCGGGCTATCACAAGgtaagtcttccttccctccct
ccctccctgtctcctgcatgtatgcatgaatctgtgtatgtgtgcttgga
agcattcagactgatcacctgtctcatgcatgtatgtagatcatctgact
tagtggtagtaataaatcagaagataaatcacttgatgaattgaaagtaa
gatttatatcgacgagtgggtaaatggtaacataaatgattaaatgaata
agacaaaaggtgcaaatgatcccacccaacaaacgatctaattaacaaca
tccacacacaaataaataaatgaaaataaacaaatgataagataagtaat
cgaataaattcacacacaaatgaatgaaaaatacacagGTGATCAAAGAA
CCCTTGGATCTCTACCTTATCAAGCGAAGGATCGACGACGGCACGATTGG
CTCCGTTTCCGCCCTCGGGCGCGCCTTGGGTGTCATGTGCGGCAACGCCA
TGGTATTTAACAACAACGACACACCCGAGTATGAAAACGCGGAAATCCTG
AGTAAATTTTGTCAGGAAAAGATAGAAGAGGCGAAAGAGGAAGAGGAAGG
CATTGGAGAGGAGGAGGCGGAACTTAAGGAGGCCAAGGGAGGGGGGAGGA
AGGGTGGGAGGAGCAGGGAGGCAGAGGCGCTGAAAACTGATTTGAATAAT
AATATGTCGCCCTTGCCCGACGCAGGGACGGGGAGGGCGAGGAGGCTGAG
GGCAGGAGTTGCAGCAATCTCGGCAGGAGTACCAGCTGTACAGGTCAAAA
AAGAGGAGAGACAGGAAGAGGGAGGAGGAGGAGGGAGGGGGAGGAGGGGG
GGGGGCGGGAGAGGGAGGAGAGGGGCTGAGGAGGAGGAGGATGGAGGGGA
GGAAGAGGGGGAGGAATTGGAGGAGGAGGATTCAGTTGTGGCGAAAGGAG
GGGGAGGGCGAGGAAGGAAAAGAGGAAGAAGAGGACGAGGTGGAGGACGG
CCGAGAAAGGTGATGGAGGTGGAGGATTCTGAGGAGGAGGGTGAGGAAGA
GGAGGATGGTGAGGAGGAGGAAGGTGGGGAGGAAGAAGAGGAGGAAGAAG
AGGAGGAGGAGGAGGATGGGGGGCGGGTGAGCAAGGGTGGGAGGAGGAGA
AATCGCGTAGCTGGGAGAGCAGCAACGGGCAAAGACGGTCGAGGCGGACG
CGGCGGAGGGAATAAGCGACGTAAGCGCACCGGGTCTGAGGATGTGGGTG
TAGTGAATGAGGAGGAGAAAGAAGAAGAGGAGGAGAAGGAGGAGAAGGAA
AAAGATGAGGAGGAGGAGGAAGAAGAGGAAGCGGAGGAAGAGGAAGCAAT
CTTGGGGAAGCGGGCGACACGCGGGGGTGGGGACACGACGCCTGTGAAGA
AGGGAGGAGGTGGAAGAGGAGGAGAACGAGGGAGTGAACGAAAGGCGAAG
AAGGAGGATGATAAGGGGGCGGCGGTCGCCATCAAGAAGGAAAGGGTTGG
GCGCCGACGGTGAGATTGTGACAAAAGTGCTTCATTTGTCATTGCTCATG
GAGGGAGGGTTGAACGGAGGGAAGGAGTAAGGATCAGTGAATCCAGAAAA
AGAATTGACGAGATTGAGTTTGGCAGTGGAA
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protein sequence of NO21G00520.1

>NO21G00520.1-protein ID=NO21G00520.1-protein|Name=NO21G00520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=818bp
MAPAPTANSTDHPTTSITASTMDVKELQAELSEMDDCVKFMQEEIDMLKS
GALDRRLKEVGAYSVPATYKRVLALVEFPPPPEGRESGSEEGEEEEEGSA
ADSEDEEGGGSEEESEEGSEDDEREEEDKKVVPRSRRGSRATELDESDAE
EEEGEGGEAGEEDEGEGGEDGEERSVTSKGGRVRRERGPKAGRNGVREGR
GGGGGEGGKSMSGASSVGSTGSKSAARTKRGISSRTGGGGGRRRRRRGDE
GGSDEEAAEEGGEQEGLEESDAEEEEEEEEEEEEEEEEEEEEGAGQEEEE
EEVEEEGSRRGRRKRAGGKPTAAAAAAGKKGVKKEKQGEEEEEEDEEEEE
EEEKEEEEGNEAESVARGKKRVLAHNRKAAAAASDPPTATNSSSSGGGRP
SLPPLAAAKRRICMRVWNKANQHRVAGTFRHPVNEDDAPGYHKVIKEPLD
LYLIKRRIDDGTIGSVSALGRALGVMCGNAMVFNNNDTPEYENAEILSKF
CQEKIEEAKEEEEGIGEEEAELKEAKGGGRKGGRSREAEALKTDLNNNMS
PLPDAGTGRARRLRAGVAAISAGVPAVQVKKEERQEEGGGGGRGRRGGGG
RGRRGAEEEEDGGEEEGEELEEEDSVVAKGGGGRGRKRGRRGRGGGRPRK
VMEVEDSEEEGEEEEDGEEEEGGEEEEEEEEEEEEDGGRVSKGGRRRNRV
AGRAATGKDGRGGRGGGNKRRKRTGSEDVGVVNEEEKEEEEEKEEKEKDE
EEEEEEEAEEEEAILGKRATRGGGDTTPVKKGGGGRGGERGSERKAKKED
DKGAAVAIKKERVGRRR*
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Synonyms
Publications