NO21G00510, NO21G00510 (gene) Nannochloropsis oceanica

Overview
NameNO21G00510
Unique NameNO21G00510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1993
Alignment locationchr21:177995..179987 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:177995..179987 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G00510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR052ncniR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G00510.1NO21G00510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G00510.1NO21G00510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G00510 ID=NO21G00510|Name=NO21G00510|organism=Nannochloropsis oceanica|type=gene|length=1993bp
CTGGGGTGTGGTGCATGGTTTTGCCGCGACGTCGCCGAGTCTCGCGGGCA
ATACTTCAAATATGATGCGTGTTAATCCGCTTGGCCACTGGCATCGCAGT
CTCACTCCTTGCTTCTCCTCGTCAATTTTTTTTATCTTGCCAGTATCGTC
CATCTTCAGCCACGGACTGGCTTTGGCTTGCTCCGCCGCCACCTTACCCT
CTCAACCTTCTTCGCTCCCCCGCACAGGTCGCCTCCAGCCTCAAGCGAAG
ATGGAGATGGAGTCTGTCTCGTCCGCCATGATAATAGATGTTGTAGCGTC
TCGTCCTCCTTCGACTTCTGTACATGAGCCTATTATGCTACCGGCCGCTG
CCGAGGACCCCTCCGGCTCCTCCTCCTCCTTTTGCTCCCCGCCTTCCTCC
CGCTCCTCGTCCTGCTCGGGCACGTTCTCTGTGTCGTCCTTCCCTTCTTC
CATCACTTACCCGTCTGATCTGGCCGCGATAAGTACAAAGACAATGACAA
GCAGTAACACCATCGGCATCGACAAGACAACCACCAGCATCAACAGCAAT
GGCATTGCTTTGGCAAAGCTCTACACTGCCCAAGACACATGGAGCACGGA
GTCTTACAGCGTGGAAGTTTCTCAGGAAGACGGTTTGTTGGTTCTCAGGC
AAGCCGCTGTCGATAGGAGAGAAGGGAAGGACGAGGACGGGATGGAGGAC
GAGGATGAGAAGGAAGGAGGGGAGGTAGTGGCAGTGATCGACCTGAAGGC
CACACATGCTTCGGGCTTGGCTCTTACTCTTTCTCCGCCCCCCGAAACAC
AAAGCAAGATGGCTGCCTCCATCCATTCCTCCCTCTCCTCTTCTCCCTCT
TCCTCTCCCCCCTCCTCGCCCCTCTTTCTCCAGCAGCAGCAGCACCACCA
CCACGAGCAGGGAAGAGAAGGGATCGGCACCAGCATCAGCGACAGTGGTA
ACAGTAACAGTAGCAAGAGTAGCGACAATAACGATAGGGAAAGCAGCAAG
AGCATCAGCAGTGAAAGTACGCTTACCCTCCCCGCTGGAACCTCGGCACT
AGGGAGAGAACTTAGAGAAGCTGCGAAGAGAGAGGGAGGGAAAGAGGGTG
GGAGGCGCAGGGAGGCGGCGGGTTACGATGATAATGCGAGAACATGTTTA
CACATAGCGGTGGGGGAGACGACCATGATATTGATGCTTGGGGATGAGAG
GAAGGCGGAAGAATTGGTAAGAGAGTCGTACAGGGCAGGAAATGGAGGGA
ACGTAGGAAGAAGAGGAGGAGGAGGAGCAGGAGCAGGAGGAGCAGGAGGA
CGAGGAGCAGGAGGAGGAGCAGAAGGACGAGGAGTAAGAGGAGGAGCAGG
AGCAGCAGGAGGGGCAAAAGAGGCGGGAAGAGGAGAAAGAAAGGAACGAA
CAGAAGGGGAAGACATAGGGTGGAGGAATGACAAAATTGCGAGGACACCC
GTGAAGAAGAGGGAGATCAAAGGAGCAGCGGGAGGAAAAAGAGGAGGAGG
AGAAGTAGGAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAAGAAAGGGTG
AAGCGAGCTCGCATCGAAATGAAAGCACGAAATGCAGCAGCTCTATCTTC
ATCACTGGTGGCAACAACAGCAGCAGCAGCAACAACAGCAACAGCAGGAG
CAACAGCAGCAGTGATGGAGCAGCAGCAGCGGCTGTAATAGAAGGAGAAG
AAGGACGAAAGCGGGAACGAAGAATAGGAAGGGGGGGAGGAAGCGAGGTA
GGGCACTACATGATCGGGTCTTATGGAGGGAGTGCTCTGGGCTTGAGGGA
GAAAGCGGCCTTTCGTGCTGCCGCTAGTGCTGCTGCTGTGGCTAGACGAA
GGAGGGAGGGAGGGAGGGAGGAAAGGGGGCCAGGGTCGCCGGCAGCGCAA
TTTGTGGCGGAGATGCGAAGGAGGAGGAAGGAGGTGAGAGAGGTGGTGGG
AGGGGGGAGGGAGGGGGGAAGGGAGGAAGGGAGGGAGAGGTAG
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protein sequence of NO21G00510.1

>NO21G00510.1-protein ID=NO21G00510.1-protein|Name=NO21G00510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=644bp
MMRVNPLGHWHRSLTPCFSSSIFFILPVSSIFSHGLALACSAATLPSQPS
SLPRTGRLQPQAKMEMESVSSAMIIDVVASRPPSTSVHEPIMLPAAAEDP
SGSSSSFCSPPSSRSSSCSGTFSVSSFPSSITYPSDLAAISTKTMTSSNT
IGIDKTTTSINSNGIALAKLYTAQDTWSTESYSVEVSQEDGLLVLRQAAV
DRREGKDEDGMEDEDEKEGGEVVAVIDLKATHASGLALTLSPPPETQSKM
AASIHSSLSSSPSSSPPSSPLFLQQQQHHHHEQGREGIGTSISDSGNSNS
SKSSDNNDRESSKSISSESTLTLPAGTSALGRELREAAKREGGKEGGRRR
EAAGYDDNARTCLHIAVGETTMILMLGDERKAEELVRESYRAGNGGNVGR
RGGGGAGAGGAGGRGAGGGAEGRGVRGGAGAAGGAKEAGRGERKERTEGE
DIGWRNDKIARTPVKKREIKGAAGGKRGGGEVGEEEEEEKEEERKGEASS
HRNESTKCSSSIFITGGNNSSSSNNSNSRSNSSSDGAAAAAVIEGEEGRK
RERRIGRGGGSEVGHYMIGSYGGSALGLREKAAFRAAASAAAVARRRREG
GREERGPGSPAAQFVAEMRRRRKEVREVVGGGREGGREEGRER*
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Synonyms
Publications