NO21G00510.1, NO21G00510.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO21G00510.1
Unique NameNO21G00510.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1993
Alignment locationchr21:177995..179987 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:177995..179987 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G00510.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G00510NO21G00510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO21G00510.1NO21G00510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO21G00510.1.cds1NO21G00510.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO21G00510.1 ID=NO21G00510.1|Name=NO21G00510.1|organism=Nannochloropsis oceanica|type=mRNA|length=1993bp
CTGGGGTGTGGTGCATGGTTTTGCCGCGACGTCGCCGAGTCTCGCGGGCA
ATACTTCAAATATGATGCGTGTTAATCCGCTTGGCCACTGGCATCGCAGT
CTCACTCCTTGCTTCTCCTCGTCAATTTTTTTTATCTTGCCAGTATCGTC
CATCTTCAGCCACGGACTGGCTTTGGCTTGCTCCGCCGCCACCTTACCCT
CTCAACCTTCTTCGCTCCCCCGCACAGGTCGCCTCCAGCCTCAAGCGAAG
ATGGAGATGGAGTCTGTCTCGTCCGCCATGATAATAGATGTTGTAGCGTC
TCGTCCTCCTTCGACTTCTGTACATGAGCCTATTATGCTACCGGCCGCTG
CCGAGGACCCCTCCGGCTCCTCCTCCTCCTTTTGCTCCCCGCCTTCCTCC
CGCTCCTCGTCCTGCTCGGGCACGTTCTCTGTGTCGTCCTTCCCTTCTTC
CATCACTTACCCGTCTGATCTGGCCGCGATAAGTACAAAGACAATGACAA
GCAGTAACACCATCGGCATCGACAAGACAACCACCAGCATCAACAGCAAT
GGCATTGCTTTGGCAAAGCTCTACACTGCCCAAGACACATGGAGCACGGA
GTCTTACAGCGTGGAAGTTTCTCAGGAAGACGGTTTGTTGGTTCTCAGGC
AAGCCGCTGTCGATAGGAGAGAAGGGAAGGACGAGGACGGGATGGAGGAC
GAGGATGAGAAGGAAGGAGGGGAGGTAGTGGCAGTGATCGACCTGAAGGC
CACACATGCTTCGGGCTTGGCTCTTACTCTTTCTCCGCCCCCCGAAACAC
AAAGCAAGATGGCTGCCTCCATCCATTCCTCCCTCTCCTCTTCTCCCTCT
TCCTCTCCCCCCTCCTCGCCCCTCTTTCTCCAGCAGCAGCAGCACCACCA
CCACGAGCAGGGAAGAGAAGGGATCGGCACCAGCATCAGCGACAGTGGTA
ACAGTAACAGTAGCAAGAGTAGCGACAATAACGATAGGGAAAGCAGCAAG
AGCATCAGCAGTGAAAGTACGCTTACCCTCCCCGCTGGAACCTCGGCACT
AGGGAGAGAACTTAGAGAAGCTGCGAAGAGAGAGGGAGGGAAAGAGGGTG
GGAGGCGCAGGGAGGCGGCGGGTTACGATGATAATGCGAGAACATGTTTA
CACATAGCGGTGGGGGAGACGACCATGATATTGATGCTTGGGGATGAGAG
GAAGGCGGAAGAATTGGTAAGAGAGTCGTACAGGGCAGGAAATGGAGGGA
ACGTAGGAAGAAGAGGAGGAGGAGGAGCAGGAGCAGGAGGAGCAGGAGGA
CGAGGAGCAGGAGGAGGAGCAGAAGGACGAGGAGTAAGAGGAGGAGCAGG
AGCAGCAGGAGGGGCAAAAGAGGCGGGAAGAGGAGAAAGAAAGGAACGAA
CAGAAGGGGAAGACATAGGGTGGAGGAATGACAAAATTGCGAGGACACCC
GTGAAGAAGAGGGAGATCAAAGGAGCAGCGGGAGGAAAAAGAGGAGGAGG
AGAAGTAGGAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAAGAAAGGGTG
AAGCGAGCTCGCATCGAAATGAAAGCACGAAATGCAGCAGCTCTATCTTC
ATCACTGGTGGCAACAACAGCAGCAGCAGCAACAACAGCAACAGCAGGAG
CAACAGCAGCAGTGATGGAGCAGCAGCAGCGGCTGTAATAGAAGGAGAAG
AAGGACGAAAGCGGGAACGAAGAATAGGAAGGGGGGGAGGAAGCGAGGTA
GGGCACTACATGATCGGGTCTTATGGAGGGAGTGCTCTGGGCTTGAGGGA
GAAAGCGGCCTTTCGTGCTGCCGCTAGTGCTGCTGCTGTGGCTAGACGAA
GGAGGGAGGGAGGGAGGGAGGAAAGGGGGCCAGGGTCGCCGGCAGCGCAA
TTTGTGGCGGAGATGCGAAGGAGGAGGAAGGAGGTGAGAGAGGTGGTGGG
AGGGGGGAGGGAGGGGGGAAGGGAGGAAGGGAGGGAGAGGTAG
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protein sequence of NO21G00510.1

>NO21G00510.1-protein ID=NO21G00510.1-protein|Name=NO21G00510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=644bp
MMRVNPLGHWHRSLTPCFSSSIFFILPVSSIFSHGLALACSAATLPSQPS
SLPRTGRLQPQAKMEMESVSSAMIIDVVASRPPSTSVHEPIMLPAAAEDP
SGSSSSFCSPPSSRSSSCSGTFSVSSFPSSITYPSDLAAISTKTMTSSNT
IGIDKTTTSINSNGIALAKLYTAQDTWSTESYSVEVSQEDGLLVLRQAAV
DRREGKDEDGMEDEDEKEGGEVVAVIDLKATHASGLALTLSPPPETQSKM
AASIHSSLSSSPSSSPPSSPLFLQQQQHHHHEQGREGIGTSISDSGNSNS
SKSSDNNDRESSKSISSESTLTLPAGTSALGRELREAAKREGGKEGGRRR
EAAGYDDNARTCLHIAVGETTMILMLGDERKAEELVRESYRAGNGGNVGR
RGGGGAGAGGAGGRGAGGGAEGRGVRGGAGAAGGAKEAGRGERKERTEGE
DIGWRNDKIARTPVKKREIKGAAGGKRGGGEVGEEEEEEKEEERKGEASS
HRNESTKCSSSIFITGGNNSSSSNNSNSRSNSSSDGAAAAAVIEGEEGRK
RERRIGRGGGSEVGHYMIGSYGGSALGLREKAAFRAAASAAAVARRRREG
GREERGPGSPAAQFVAEMRRRRKEVREVVGGGREGGREEGRER*
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mRNA from alignment at chr21:177995..179987-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO21G00510.1 ID=NO21G00510.1|Name=NO21G00510.1|organism=Nannochloropsis oceanica|type=mRNA|length=1993bp|location=Sequence derived from alignment at chr21:177995..179987- (Nannochloropsis oceanica)
CTGGGGTGTGGTGCATGGTTTTGCCGCGACGTCGCCGAGTCTCGCGGGCA
ATACTTCAAATATGATGCGTGTTAATCCGCTTGGCCACTGGCATCGCAGT
CTCACTCCTTGCTTCTCCTCGTCAATTTTTTTTATCTTGCCAGTATCGTC
CATCTTCAGCCACGGACTGGCTTTGGCTTGCTCCGCCGCCACCTTACCCT
CTCAACCTTCTTCGCTCCCCCGCACAGGTCGCCTCCAGCCTCAAGCGAAG
ATGGAGATGGAGTCTGTCTCGTCCGCCATGATAATAGATGTTGTAGCGTC
TCGTCCTCCTTCGACTTCTGTACATGAGCCTATTATGCTACCGGCCGCTG
CCGAGGACCCCTCCGGCTCCTCCTCCTCCTTTTGCTCCCCGCCTTCCTCC
CGCTCCTCGTCCTGCTCGGGCACGTTCTCTGTGTCGTCCTTCCCTTCTTC
CATCACTTACCCGTCTGATCTGGCCGCGATAAGTACAAAGACAATGACAA
GCAGTAACACCATCGGCATCGACAAGACAACCACCAGCATCAACAGCAAT
GGCATTGCTTTGGCAAAGCTCTACACTGCCCAAGACACATGGAGCACGGA
GTCTTACAGCGTGGAAGTTTCTCAGGAAGACGGTTTGTTGGTTCTCAGGC
AAGCCGCTGTCGATAGGAGAGAAGGGAAGGACGAGGACGGGATGGAGGAC
GAGGATGAGAAGGAAGGAGGGGAGGTAGTGGCAGTGATCGACCTGAAGGC
CACACATGCTTCGGGCTTGGCTCTTACTCTTTCTCCGCCCCCCGAAACAC
AAAGCAAGATGGCTGCCTCCATCCATTCCTCCCTCTCCTCTTCTCCCTCT
TCCTCTCCCCCCTCCTCGCCCCTCTTTCTCCAGCAGCAGCAGCACCACCA
CCACGAGCAGGGAAGAGAAGGGATCGGCACCAGCATCAGCGACAGTGGTA
ACAGTAACAGTAGCAAGAGTAGCGACAATAACGATAGGGAAAGCAGCAAG
AGCATCAGCAGTGAAAGTACGCTTACCCTCCCCGCTGGAACCTCGGCACT
AGGGAGAGAACTTAGAGAAGCTGCGAAGAGAGAGGGAGGGAAAGAGGGTG
GGAGGCGCAGGGAGGCGGCGGGTTACGATGATAATGCGAGAACATGTTTA
CACATAGCGGTGGGGGAGACGACCATGATATTGATGCTTGGGGATGAGAG
GAAGGCGGAAGAATTGGTAAGAGAGTCGTACAGGGCAGGAAATGGAGGGA
ACGTAGGAAGAAGAGGAGGAGGAGGAGCAGGAGCAGGAGGAGCAGGAGGA
CGAGGAGCAGGAGGAGGAGCAGAAGGACGAGGAGTAAGAGGAGGAGCAGG
AGCAGCAGGAGGGGCAAAAGAGGCGGGAAGAGGAGAAAGAAAGGAACGAA
CAGAAGGGGAAGACATAGGGTGGAGGAATGACAAAATTGCGAGGACACCC
GTGAAGAAGAGGGAGATCAAAGGAGCAGCGGGAGGAAAAAGAGGAGGAGG
AGAAGTAGGAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAAGAAAGGGTG
AAGCGAGCTCGCATCGAAATGAAAGCACGAAATGCAGCAGCTCTATCTTC
ATCACTGGTGGCAACAACAGCAGCAGCAGCAACAACAGCAACAGCAGGAG
CAACAGCAGCAGTGATGGAGCAGCAGCAGCGGCTGTAATAGAAGGAGAAG
AAGGACGAAAGCGGGAACGAAGAATAGGAAGGGGGGGAGGAAGCGAGGTA
GGGCACTACATGATCGGGTCTTATGGAGGGAGTGCTCTGGGCTTGAGGGA
GAAAGCGGCCTTTCGTGCTGCCGCTAGTGCTGCTGCTGTGGCTAGACGAA
GGAGGGAGGGAGGGAGGGAGGAAAGGGGGCCAGGGTCGCCGGCAGCGCAA
TTTGTGGCGGAGATGCGAAGGAGGAGGAAGGAGGTGAGAGAGGTGGTGGG
AGGGGGGAGGGAGGGGGGAAGGGAGGAAGGGAGGGAGAGGTAG
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Coding sequence (CDS) from alignment at chr21:177995..179987-

>NO21G00510.1 ID=NO21G00510.1|Name=NO21G00510.1|organism=Nannochloropsis oceanica|type=CDS|length=1932bp|location=Sequence derived from alignment at chr21:177995..179987- (Nannochloropsis oceanica)
ATGATGCGTGTTAATCCGCTTGGCCACTGGCATCGCAGTCTCACTCCTTG
CTTCTCCTCGTCAATTTTTTTTATCTTGCCAGTATCGTCCATCTTCAGCC
ACGGACTGGCTTTGGCTTGCTCCGCCGCCACCTTACCCTCTCAACCTTCT
TCGCTCCCCCGCACAGGTCGCCTCCAGCCTCAAGCGAAGATGGAGATGGA
GTCTGTCTCGTCCGCCATGATAATAGATGTTGTAGCGTCTCGTCCTCCTT
CGACTTCTGTACATGAGCCTATTATGCTACCGGCCGCTGCCGAGGACCCC
TCCGGCTCCTCCTCCTCCTTTTGCTCCCCGCCTTCCTCCCGCTCCTCGTC
CTGCTCGGGCACGTTCTCTGTGTCGTCCTTCCCTTCTTCCATCACTTACC
CGTCTGATCTGGCCGCGATAAGTACAAAGACAATGACAAGCAGTAACACC
ATCGGCATCGACAAGACAACCACCAGCATCAACAGCAATGGCATTGCTTT
GGCAAAGCTCTACACTGCCCAAGACACATGGAGCACGGAGTCTTACAGCG
TGGAAGTTTCTCAGGAAGACGGTTTGTTGGTTCTCAGGCAAGCCGCTGTC
GATAGGAGAGAAGGGAAGGACGAGGACGGGATGGAGGACGAGGATGAGAA
GGAAGGAGGGGAGGTAGTGGCAGTGATCGACCTGAAGGCCACACATGCTT
CGGGCTTGGCTCTTACTCTTTCTCCGCCCCCCGAAACACAAAGCAAGATG
GCTGCCTCCATCCATTCCTCCCTCTCCTCTTCTCCCTCTTCCTCTCCCCC
CTCCTCGCCCCTCTTTCTCCAGCAGCAGCAGCACCACCACCACGAGCAGG
GAAGAGAAGGGATCGGCACCAGCATCAGCGACAGTGGTAACAGTAACAGT
AGCAAGAGTAGCGACAATAACGATAGGGAAAGCAGCAAGAGCATCAGCAG
TGAAAGTACGCTTACCCTCCCCGCTGGAACCTCGGCACTAGGGAGAGAAC
TTAGAGAAGCTGCGAAGAGAGAGGGAGGGAAAGAGGGTGGGAGGCGCAGG
GAGGCGGCGGGTTACGATGATAATGCGAGAACATGTTTACACATAGCGGT
GGGGGAGACGACCATGATATTGATGCTTGGGGATGAGAGGAAGGCGGAAG
AATTGGTAAGAGAGTCGTACAGGGCAGGAAATGGAGGGAACGTAGGAAGA
AGAGGAGGAGGAGGAGCAGGAGCAGGAGGAGCAGGAGGACGAGGAGCAGG
AGGAGGAGCAGAAGGACGAGGAGTAAGAGGAGGAGCAGGAGCAGCAGGAG
GGGCAAAAGAGGCGGGAAGAGGAGAAAGAAAGGAACGAACAGAAGGGGAA
GACATAGGGTGGAGGAATGACAAAATTGCGAGGACACCCGTGAAGAAGAG
GGAGATCAAAGGAGCAGCGGGAGGAAAAAGAGGAGGAGGAGAAGTAGGAG
AAGAAGAAGAAGAAGAAAAAGAAGAAGAAAGAAAGGGTGAAGCGAGCTCG
CATCGAAATGAAAGCACGAAATGCAGCAGCTCTATCTTCATCACTGGTGG
CAACAACAGCAGCAGCAGCAACAACAGCAACAGCAGGAGCAACAGCAGCA
GTGATGGAGCAGCAGCAGCGGCTGTAATAGAAGGAGAAGAAGGACGAAAG
CGGGAACGAAGAATAGGAAGGGGGGGAGGAAGCGAGGTAGGGCACTACAT
GATCGGGTCTTATGGAGGGAGTGCTCTGGGCTTGAGGGAGAAAGCGGCCT
TTCGTGCTGCCGCTAGTGCTGCTGCTGTGGCTAGACGAAGGAGGGAGGGA
GGGAGGGAGGAAAGGGGGCCAGGGTCGCCGGCAGCGCAATTTGTGGCGGA
GATGCGAAGGAGGAGGAAGGAGGTGAGAGAGGTGGTGGGAGGGGGGAGGG
AGGGGGGAAGGGAGGAAGGGAGGGAGAGGTAG
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Synonyms
Publications