NO21G00370, NO21G00370 (gene) Nannochloropsis oceanica

Overview
NameNO21G00370
Unique NameNO21G00370
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1604
Alignment locationchr21:113508..115111 +

Link to JBrowse

Properties
Property NameValue
DescriptionShort-chain dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:113508..115111 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Homology
BLAST of NO21G00370 vs. NCBI_GenBank
Match: EWM20681.1 (short-chain dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 690.6 bits (1781), Expect = 3.500e-195
Identity = 363/495 (73.33%), Postives = 415/495 (83.84%), Query Frame = 0
Query:    8 RRVLDLLPLTLLSLCIVLVQAGAFSIRSGGCRMGAAATSGG--IGLPIRSALRCLGMTPPNISLLLGRKGGAASSSDESSREIASSWMRTREV-RNGYTSDGRRRLLSMAELFASKDSSNEKKSLTDGTFAASGNKNLFSRDGVFKLAGYAAVAYIGKQFFNGGRYDDEPDLSGKVAVITGGNSGIGKETAIRLATLGARVLIACRNSEKGEAAVRDIVNAVSPSSTVEG--ASRKKNAAPPQVESLVMDLSDLKSIDRFATELNKHVDKVDILVNNAGVMAVSNLERTQDGFERQLGVNHLGHFHLTNRLFDLLLKGAATRDGARIVNVASEAHRFGGLDLQDPNYLTREYKKWEAYGQSKLANILFTRELHRRLAEKGMDKKVLALCCHPGVVRTELGRYLIDDIPSVGKVALAPVALAGWYFTKSPKQGSQTQVYLAASPTLKDEAERGAAVGGTYFSDCRPKKTTKEAEDLDAAGKLWKLSEKLTGSSFSV 498
            +R ++ + L +LSL  VLVQA AFS   GG  +G+ AT  G    +P   +  C+ M  P   LL   +GGA + + E  R++ASS +R REV RNGYT+DGRRRLLSM ELF  ++ S E    + G F+A+G++ LFSRDG  +L GYAAVAYIGKQ FNGGRYD+ PDL+G+VAVITGGN+GIGKETAIRLA++GARVLIACRN EKGE AVRDI++AVSP S  +   + RK   +PPQVESLV+DL+DLKSIDRFATEL K VD+VD+L+NNAGVMAVS LERT+DGFER LGVNHLGHFHLTNRLFDLLLKG +TR+G RIVNVASEAHRFGGLD QDPNYL REYKKWEAYGQSKLANILFTRELHRRLAEKG+DK++LA+CCHPGVVRTELGRYLIDDIPSVGKVALAP+ALAGWYFTKSPKQGSQTQVYLAASPTLK+EAE+GAAVGGTYFSDCRPKKTTKEAEDL  AG+LWKLSEKLTGSSFSV
Sbjct:   13 QRGIERMLLAVLSLGTVLVQAKAFSFHGGG-GVGSCATKVGSRFVVPTLFSPGCMSMARPVTPLLASLRGGATNGA-EGGRDVASSRVRVREVRRNGYTADGRRRLLSMRELFGHQEGSPEGNDSSGGLFSAAGSQKLFSRDGALRLVGYAAVAYIGKQVFNGGRYDENPDLAGRVAVITGGNTGIGKETAIRLASMGARVLIACRNPEKGETAVRDILDAVSPPSATDAPVSGRKAINSPPQVESLVLDLADLKSIDRFATELGKRVDRVDMLINNAGVMAVSRLERTKDGFERHLGVNHLGHFHLTNRLFDLLLKGGSTREGVRIVNVASEAHRFGGLDPQDPNYLRREYKKWEAYGQSKLANILFTRELHRRLAEKGLDKRILAVCCHPGVVRTELGRYLIDDIPSVGKVALAPLALAGWYFTKSPKQGSQTQVYLAASPTLKEEAEQGAAVGGTYFSDCRPKKTTKEAEDLALAGELWKLSEKLTGSSFSV 505          
BLAST of NO21G00370 vs. NCBI_GenBank
Match: XP_005832631.1 (hypothetical protein GUITHDRAFT_152655 [Guillardia theta CCMP2712] >EKX45651.1 hypothetical protein GUITHDRAFT_152655 [Guillardia theta CCMP2712])

HSP 1 Score: 287.3 bits (734), Expect = 8.800e-74
Identity = 170/372 (45.70%), Postives = 225/372 (60.48%), Query Frame = 0
Query:  143 FSRDGVFKLAGYAAVAYIGKQFFNGGRYDDEPDLSGKVAVITGGNSGIGKETAIRLATLGARVLIACRNSEKGEAAVRDIVNAVSPSSTVEGASRKKNAAPPQVESLVMDLSDLKSIDRFATELNKHVDKVDILVNNAGVMAVSNLERTQDGFERQLGVNHLGHFHLTNRLFDLLLKGAATRDGARIVNVASEAH--RFGGLDLQDPNYLTREYKKWEAYGQSKLANILFTRELHRRLAEKGMDKKVLALCCHPGVVRTELGR------YLIDDIPSVG-KVALAPVALAGW--------YFTKSPKQGSQTQVYLAASPTLKDEAERGAAVGGTYFSDCRPKKTTKEAEDLDAAGKLWKLSEKLTGSSFSV 498
            F R    K+AG AA   +GK+  +GG Y   PDL+G+VAV+TG N+G+GKET IRLA LGA V++A R+ E+GE A ++I  A++ S               ++ ++ +DL+ LKSI+ FA+EL    DK+D+LVNNAGVMA+   E T+DG ERQ+G+NH GHFHLTN L   + K +     ARI+N++S+AH   F G++  D    +  Y  W+AYGQSKLANILFT+EL RRL   G D  V A   HPGVVRTELGR       L   + SV  K  L P AL           Y ++ P QG+QTQV  +  P LK +      +GG YF DC     +  A+D  AA KLW++SE+LTGS F+V
Sbjct:   10 FDRRTFGKVAGGAAALVLGKKVLDGGDYTGTPDLTGQVAVVTGANTGLGKETCIRLAKLGAEVVLASRSKERGEKAEKEI-RALTGSD--------------KLSTMELDLASLKSIELFASELRSRHDKIDLLVNNAGVMAIPTREETKDGLERQIGINHFGHFHLTNLLLPQIKKASEKSGDARIINLSSDAHLIAFNGMNFDDLQSKS-SYDPWKAYGQSKLANILFTKELQRRL---GADSPVSAAAVHPGVVRTELGRNFFLPPELCSSLGSVDCKGQLPPAALVAGAVLLPLAVYTSRDPAQGAQTQVRCSVDPELKGK------LGGRYFRDCHEAAPSPAAQDASAALKLWEISEELTGSKFNV 356          
BLAST of NO21G00370 vs. NCBI_GenBank
Match: CEM38194.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 253.8 bits (647), Expect = 1.100e-63
Identity = 148/340 (43.53%), Postives = 205/340 (60.29%), Query Frame = 0
Query:  161 GKQFFNGGRYDDEPDLSGKVAVITGGNSGIGKETAIRLATLGARVLIACRNSEKGEAAVRDIVNAVSPSSTVEGASRKKNAAPPQVESLVMDLSDLKSIDRFATELNKHVDKVDILVNNAGVMAVSNLERTQDGFERQLGVNHLGHFHLTNRLFDLLLKGAATRDGARIVNVASEAHRFGGLDLQDPNYLTREYKKWEAYG-QSKLANILFTRELHRRLAEKGMDKKVLALCCHPGVVRTELGRYLI--DDIPSVG-KVALAPVALAGWYFTKSPKQGSQTQVYLAASPTLKDEAERGAAVGGTYFSDCRPKKTTKEAEDLDAAGKLWKLSEKLTGSSFS 497
            GK+  +G  Y +  DLSG+  VITGGN+G+GK  A+RLA LGA V IACR+  K EAAV+DI  A   S+               V+++ +DL+D  SI   A EL+  + K+D+L+NNAGVMA+ N E T DG+E+Q+G+NHLGHF LT+ +  LL    A     R+VNV+S+AH    LD  D  +LT++Y  W AYG +  L N              G  +++ A+ CHPG+VRTELGRY    D+IP       L P+ + G Y ++SP++G+QTQ+Y AA PTL+  A      GG YF DC     +K+A D   A +LW++SEKLTG+S++
Sbjct:   63 GKRVIDGPVYSNVVDLSGENIVITGGNTGLGKAAAVRLAALGAAVTIACRSPSKAEAAVKDIQQASGSSA---------------VDAVPLDLTDSSSIASCARELSGRLGKIDVLMNNAGVMAIPNRETTADGYEKQMGINHLGHFRLTSLVLPLL----AAASTPRVVNVSSKAHTLAKLDFSD-FFLTKDYDPWVAYGNKGSLGN------------AAGNLRQLTAVSCHPGLVRTELGRYFFNTDNIPLFPFGWLLTPLLIPGIYASRSPERGAQTQIYCAAEPTLQGTA------GGEYFEDCHISTPSKDARDRQMAARLWEVSEKLTGASWN 364          
BLAST of NO21G00370 vs. NCBI_GenBank
Match: CBJ25484.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 252.3 bits (643), Expect = 3.100e-63
Identity = 177/407 (43.49%), Postives = 222/407 (54.55%), Query Frame = 0
Query:  100 NGYTSDGRRRLLSMAELFASKDSSNEKKSLTDGTFAASGNKNLFSRDGVFKLAG-YAAVAYIGKQFFNGGRYDDEPDLSGKVAVITGGNSGIGKETAIRLATLGARVLIACRNSEKGEAAVRDIVNAVSPSSTVEGASRKKNAAPPQVESLVMDLSDLKSIDRFATELNKHVDKVDILVNNAGVMAVSNLERTQDGFERQLGVNHLGHFHLTNRLFDLLLKGAATRDGARIVNVASEAHRFGG------LDLQDPNYLTREYKKWEAYGQSKLANILFTRELHRRLAEKGMDKKVLALCCHPGVVRTELGRYLIDDIPSVGKVALAPVALAG-WYFTKSPKQGSQTQVYLAASPTLKDEAERGAAVGGTYFSDCRPKKTTKE-AEDLDAAGKLWKLSEKLTGSSFSV 498
            NG  +   R  + MA    +    +E+ +   G F     K+L   +GV K AG   A  ++ K F  G  Y   PDLSGK AVITGGN+G+GKETA+RLA LGA V IACRN +K  AA+ DI               K  A   +V ++ +DL+ L S+  FA       D++DILVNNAGVMA+   + T+DGFE Q G NHLGHF LT+ L   LLK       AR+VNVAS AH F        L+ Q P      Y  W+AYG SKL+NI FT+ L RR+  KG    + A   HPG  RTELGRYL D  PS     L   ALA     TKS K+G+QTQ+  AA P L     +G++ GGTYF   +  +   E A D +AA ++W  SEKL G  FSV
Sbjct:   42 NGMPAAAARTSIRMASSSPADGGGDEQST---GPFT---RKSLL--EGVTKAAGVLGAGTFVQKGFVAGVPYHGSPDLSGKTAVITGGNTGLGKETAVRLAQLGADVTIACRNPDKAFAALDDI---------------KAQAPGAKVGAMPLDLASLDSVGSFAKRYASSSDRLDILVNNAGVMAIPERQATKDGFEMQFGTNHLGHFRLTSLLMPALLKS----PDARVVNVASSAHLFASSVEWDDLNAQAPG----AYAPWKAYGLSKLSNIYFTKALQRRVDSKG--GSITATTLHPGACRTELGRYLFD--PSQPANPLVYPALAALTLVTKSSKEGAQTQIACAADPAL----GKGSSAGGTYFVGPKISELPSELARDPEAAERMWAASEKLVG-KFSV 408          
BLAST of NO21G00370 vs. NCBI_GenBank
Match: XP_014340281.1 (PREDICTED: retinol dehydrogenase 12-like [Latimeria chalumnae])

HSP 1 Score: 239.6 bits (610), Expect = 2.100e-59
Identity = 153/356 (42.98%), Postives = 205/356 (57.58%), Query Frame = 0
Query:  138 GNKNLFSRDGVFKLAGYAAVA-YIGKQFFNGGRYDDEPDLSGKVAVITGGNSGIGKETAIRLATLGARVLIACRNSEKGEAAVRDIVNAVSPSSTVEGASRKKNAAPPQVESLVMDLSDLKSIDRFATELNKHVDKVDILVNNAGVMAVSNLERTQDGFERQLGVNHLGHFHLTNRLFDLLLKGAATRDGARIVNVASEAHRFGGLDLQDPNYLTREYKKWEAYGQSKLANILFTRELHRRLAEKGMDKKVLALCCHPGVVRTELGRYLIDDIPSVGKVALAPVALAGWYFTKSPKQGSQTQVYLAASPTLKDEAERGAAVGGTYFSDCRPKKTTKEAEDLDAAGKLWKLSEKLTG 493
            G ++L   +G  K AG   +  ++ +++F+GG    +  L GK  +ITG N GIGKETA  LA  GARV++ACR+  K E A  D+               +K+     +    +DL+ L S+ +F  E+ +   ++DIL+NNAGVM    L+ T+DGFE Q GVNHLGHF LTN L DLL K A     +RIVNV+S AH  G +   D N L ++Y  +E Y QSKLAN++FTREL RRL   G    V A   HPGVV TELGR+++  IP   ++   P  L   +  KSP QG+QT ++ A        AE      G YFSDC PKKT  +AED +AA KLW+LS ++ G
Sbjct:    2 GIRHLDVTEGYNKNAGRPGIGLFMLRKWFSGGICRSKVRLDGKTVIITGANVGIGKETARDLARRGARVILACRDLNKAEQAASDL---------------RKDTGNGILIVKKLDLASLNSVRKFTKEMQETEQRLDILINNAGVMRCPKLQ-TEDGFELQFGVNHLGHFLLTNLLLDLLKKSAP----SRIVNVSSLAHEKGKIYFDDLN-LNKKYDPYENYRQSKLANVIFTRELARRLEGTG----VTANSLHPGVVCTELGRFILPTIPMWKRMIFTPFML---FVFKSPWQGAQTSIHCAV-------AEELEKTSGLYFSDCVPKKTAPQAEDDEAAQKLWELSLQMVG 322          
BLAST of NO21G00370 vs. NCBI_GenBank
Match: XP_020619101.1 (retinol dehydrogenase 13-like [Orbicella faveolata])

HSP 1 Score: 237.3 bits (604), Expect = 1.000e-58
Identity = 145/359 (40.39%), Postives = 207/359 (57.66%), Query Frame = 0
Query:  141 NLFSRDGVFKLAG----YAAVA---YIGKQFFNGGRYDDEPDLSGKVAVITGGNSGIGKETAIRLATLGARVLIACRNSEKGEAAVRDIVNAVSPSSTVEGASRKKNAAPPQVESLVMDLSDLKSIDRFATELNKHVDKVDILVNNAGVMAVSNLERTQDGFERQLGVNHLGHFHLTNRLFDLLLKGAATRDGARIVNVASEAHRFGGLDLQDPNYLTREYKKWEAYGQSKLANILFTRELHRRLAEKGMDKKVLALCCHPGVVRTELGRYLIDDIPSVGKVALAPVALAGWYFTKSPKQGSQTQVYLAASPTLKDEAERGAAVGGTYFSDCRPKKTTKEAEDLDAAGKLWKLSEKLTG 493
            N+   +GV+K+AG     AA A   ++ + +F+GG  + +  L GK  ++TG N+GIG+ETA+ LA  GARV++ACRN EK   A  +I               K      +V    +DL+ LKS+  FA E+++  D++DIL+NNAG+M      +T+DGFE Q GVNHLGHF LTN L D+L +       +RI+NV+S AH  G +   D      EY    AY QSKLAN+LFTREL +RL     D  +L    HPGVV+TEL R+       V  + LAP++   W F K+P+QG+QT ++ A +    D+ E      G Y+SDC+PK+   + +D +AA +LW++S  L G
Sbjct:    6 NMAVPEGVWKIAGPLSTVAACAGGIFLLRNYFSGGVCNYKTKLDGKTVIVTGANTGIGRETALDLARKGARVIMACRNLEKAHTAAEEI---------------KMTTGNKKVIVKELDLASLKSVRNFAEEVHQSEDRLDILINNAGIMRCP-YWKTEDGFEMQFGVNHLGHFLLTNLLLDMLERSKP----SRIINVSSLAHVRGKIRFDDLR-SEHEYSPGSAYAQSKLANVLFTRELSKRLE----DTDILVTAVHPGVVKTELARHTSFSKSKVASLTLAPIS---WLFFKTPRQGAQTTIHCAVA----DDVE-----SGLYYSDCKPKEPADQGKDDEAAKQLWEVSAGLVG 327          
BLAST of NO21G00370 vs. NCBI_GenBank
Match: EKC41628.1 (Retinol dehydrogenase 13 [Crassostrea gigas])

HSP 1 Score: 236.1 bits (601), Expect = 2.300e-58
Identity = 147/332 (44.28%), Postives = 193/332 (58.13%), Query Frame = 0
Query:  162 KQFFNGGRYDDEPDLSGKVAVITGGNSGIGKETAIRLATLGARVLIACRNSEKGEAAVRDIVNAVSPSSTVEGASRKKNAAPPQVESLVMDLSDLKSIDRFATELNKHVDKVDILVNNAGVMAVSNLERTQDGFERQLGVNHLGHFHLTNRLFDLLLKGAATRDGARIVNVASEAH-RFGGLDLQDPNYLTREYKKWEAYGQSKLANILFTRELHRRLAEKGMDKKVLALCCHPGVVRTELGRYLIDDIPSVGKVALAPVALAGWYFTKSPKQGSQTQVYLAASPTLKDEAERGAAVGGTYFSDCRPKKTTKEAEDLDAAGKLWKLSEKLTG 493
            +++F GG    +  L GK  +ITG N+GIGKETAI LA+ GA+V++ACR+  + E A  DI+               K +    +   ++DL+ L SI +FA  +NK   K+DIL+NNAG+M +    +TQDGFE Q GVNHLGHF LTN L D +   A     ARI+NV+S AH     LD  D N   + Y     Y QSKLAN+LFTREL RRL        V A   HPGVV TEL RYL   +P   ++ LAP+    +   K+P QG+QT +Y A   +L       A+V G YFSDC  K+ +K A+D +AA KLW++SEKL G
Sbjct:   11 RRYFAGGVCRSKARLDGKTVIITGANTGIGKETAIDLASRGAKVILACRDVIRAERAATDIM---------------KKSNNRNIVVKIVDLASLDSIRKFADNINKSEPKIDILINNAGIM-MCPYWKTQDGFEMQFGVNHLGHFLLTNLLLDKIKSSAP----ARIINVSSHAHTHTDKLDFDDLNG-EKNYNSITVYRQSKLANVLFTRELSRRL----QGTNVTANSLHPGVVDTELTRYLPRSVPFYFRILLAPII---YLLGKTPLQGAQTTIYCAVEESL-------ASVTGKYFSDCAIKEESKAAQDDEAAKKLWEISEKLVG 307          
BLAST of NO21G00370 vs. NCBI_GenBank
Match: XP_006001643.1 (PREDICTED: retinol dehydrogenase 11-like [Latimeria chalumnae])

HSP 1 Score: 236.1 bits (601), Expect = 2.300e-58
Identity = 140/331 (42.30%), Postives = 195/331 (58.91%), Query Frame = 0
Query:  162 KQFFNGGRYDDEPDLSGKVAVITGGNSGIGKETAIRLATLGARVLIACRNSEKGEAAVRDIVNAVSPSSTVEGASRKKNAAPPQVESLVMDLSDLKSIDRFATELNKHVDKVDILVNNAGVMAVSNLERTQDGFERQLGVNHLGHFHLTNRLFDLLLKGAATRDGARIVNVASEAHRFGGLDLQDPNYLTREYKKWEAYGQSKLANILFTRELHRRLAEKGMDKKVLALCCHPGVVRTELGRYLIDDIPSVGKVALAPVALAGWYFTKSPKQGSQTQVYLAASPTLKDEAERGAAVGGTYFSDCRPKKTTKEAEDLDAAGKLWKLSEKLTG 493
            +++  GG    +  L GKVAVITG N+GIGKETA  LA  GAR++IACR+++KGE A  +I               +K+     V    +DL+ L S+ +FA+E+ +   ++D+L+NNAGVM      +T+DGFE QLGVNHLGHF LTN L + L   A     +RIVNVAS+ H FG +   D  +L + YK  + Y QSKLANILFT+EL R+L   G    V     HPGV+ T+LGR+++   P + K+   P+     +F K+P QG+QT +Y A +  L+D       + G Y+SDC   +   +A+D  AA +LW LS KL G
Sbjct:   26 RKWITGGVCRSKARLDGKVAVITGANTGIGKETAQDLARRGARIVIACRDTKKGEEAAAEI---------------RKSTGNGNVVVRRLDLASLASVQQFASEIQEAEPRLDVLINNAGVMMCPK-GKTEDGFEMQLGVNHLGHFFLTNLLLEKLKSSAP----SRIVNVASKGHTFGKIHFDD-IFLDKNYKSLDCYNQSKLANILFTKELARKLKGTG----VTTYSLHPGVIWTDLGRHVLTGYPLLKKLLTLPLL----FFMKTPVQGAQTTIYCAVAEELQD-------ISGLYYSDCALMEPAPQAKDDQAARRLWDLSAKLVG 320          
BLAST of NO21G00370 vs. NCBI_GenBank
Match: XP_011452611.2 (PREDICTED: retinol dehydrogenase 13 isoform X1 [Crassostrea gigas])

HSP 1 Score: 236.1 bits (601), Expect = 2.300e-58
Identity = 147/332 (44.28%), Postives = 193/332 (58.13%), Query Frame = 0
Query:  162 KQFFNGGRYDDEPDLSGKVAVITGGNSGIGKETAIRLATLGARVLIACRNSEKGEAAVRDIVNAVSPSSTVEGASRKKNAAPPQVESLVMDLSDLKSIDRFATELNKHVDKVDILVNNAGVMAVSNLERTQDGFERQLGVNHLGHFHLTNRLFDLLLKGAATRDGARIVNVASEAH-RFGGLDLQDPNYLTREYKKWEAYGQSKLANILFTRELHRRLAEKGMDKKVLALCCHPGVVRTELGRYLIDDIPSVGKVALAPVALAGWYFTKSPKQGSQTQVYLAASPTLKDEAERGAAVGGTYFSDCRPKKTTKEAEDLDAAGKLWKLSEKLTG 493
            +++F GG    +  L GK  +ITG N+GIGKETAI LA+ GA+V++ACR+  + E A  DI+               K +    +   ++DL+ L SI +FA  +NK   K+DIL+NNAG+M +    +TQDGFE Q GVNHLGHF LTN L D +   A     ARI+NV+S AH     LD  D N   + Y     Y QSKLAN+LFTREL RRL        V A   HPGVV TEL RYL   +P   ++ LAP+    +   K+P QG+QT +Y A   +L       A+V G YFSDC  K+ +K A+D +AA KLW++SEKL G
Sbjct:  112 RRYFAGGVCRSKARLDGKTVIITGANTGIGKETAIDLASRGAKVILACRDVIRAERAATDIM---------------KKSNNRNIVVKIVDLASLDSIRKFADNINKSEPKIDILINNAGIM-MCPYWKTQDGFEMQFGVNHLGHFLLTNLLLDKIKSSAP----ARIINVSSHAHTHTDKLDFDDLNG-EKNYNSITVYRQSKLANVLFTRELSRRL----QGTNVTANSLHPGVVDTELTRYLPRSVPFYFRILLAPII---YLLGKTPLQGAQTTIYCAVEESL-------ASVTGKYFSDCAIKEESKAAQDDEAAKKLWEISEKLVG 408          
BLAST of NO21G00370 vs. NCBI_GenBank
Match: XP_011452613.2 (PREDICTED: retinol dehydrogenase 13 isoform X2 [Crassostrea gigas])

HSP 1 Score: 236.1 bits (601), Expect = 2.300e-58
Identity = 147/332 (44.28%), Postives = 193/332 (58.13%), Query Frame = 0
Query:  162 KQFFNGGRYDDEPDLSGKVAVITGGNSGIGKETAIRLATLGARVLIACRNSEKGEAAVRDIVNAVSPSSTVEGASRKKNAAPPQVESLVMDLSDLKSIDRFATELNKHVDKVDILVNNAGVMAVSNLERTQDGFERQLGVNHLGHFHLTNRLFDLLLKGAATRDGARIVNVASEAH-RFGGLDLQDPNYLTREYKKWEAYGQSKLANILFTRELHRRLAEKGMDKKVLALCCHPGVVRTELGRYLIDDIPSVGKVALAPVALAGWYFTKSPKQGSQTQVYLAASPTLKDEAERGAAVGGTYFSDCRPKKTTKEAEDLDAAGKLWKLSEKLTG 493
            +++F GG    +  L GK  +ITG N+GIGKETAI LA+ GA+V++ACR+  + E A  DI+               K +    +   ++DL+ L SI +FA  +NK   K+DIL+NNAG+M +    +TQDGFE Q GVNHLGHF LTN L D +   A     ARI+NV+S AH     LD  D N   + Y     Y QSKLAN+LFTREL RRL        V A   HPGVV TEL RYL   +P   ++ LAP+    +   K+P QG+QT +Y A   +L       A+V G YFSDC  K+ +K A+D +AA KLW++SEKL G
Sbjct:  112 RRYFAGGVCRSKARLDGKTVIITGANTGIGKETAIDLASRGAKVILACRDVIRAERAATDIM---------------KKSNNRNIVVKIVDLASLDSIRKFADNINKSEPKIDILINNAGIM-MCPYWKTQDGFEMQFGVNHLGHFLLTNLLLDKIKSSAP----ARIINVSSHAHTHTDKLDFDDLNG-EKNYNSITVYRQSKLANVLFTRELSRRL----QGTNVTANSLHPGVVDTELTRYLPRSVPFYFRILLAPII---YLLGKTPLQGAQTTIYCAVEESL-------ASVTGKYFSDCAIKEESKAAQDDEAAKKLWEISEKLVG 408          
The following BLAST results are available for this feature:
BLAST of NO21G00370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20681.13.500e-19573.33short-chain dehydrogenase [Nannochloropsis gaditan... [more]
XP_005832631.18.800e-7445.70hypothetical protein GUITHDRAFT_152655 [Guillardia... [more]
CEM38194.11.100e-6343.53unnamed protein product [Vitrella brassicaformis C... [more]
CBJ25484.13.100e-6343.49conserved unknown protein [Ectocarpus siliculosus][more]
XP_014340281.12.100e-5942.98PREDICTED: retinol dehydrogenase 12-like [Latimeri... [more]
XP_020619101.11.000e-5840.39retinol dehydrogenase 13-like [Orbicella faveolata... [more]
EKC41628.12.300e-5844.28Retinol dehydrogenase 13 [Crassostrea gigas][more]
XP_006001643.12.300e-5842.30PREDICTED: retinol dehydrogenase 11-like [Latimeri... [more]
XP_011452611.22.300e-5844.28PREDICTED: retinol dehydrogenase 13 isoform X1 [Cr... [more]
XP_011452613.22.300e-5844.28PREDICTED: retinol dehydrogenase 13 isoform X2 [Cr... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL030nonsL030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL029nonsL029Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR052ncniR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR099ngnoR099Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR062ngnoR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007419NSK007419Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G00370.1NO21G00370.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606189gene_9498Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100704g2gene9726Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G00370.1NO21G00370.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G00370 ID=NO21G00370|Name=NO21G00370|organism=Nannochloropsis oceanica|type=gene|length=1604bp
ATGCCCCAGGTCCTTCTCCCCCGGCGTGTCCTAGACCTCCTGCCCTTAAC
CCTCCTGTCCTTATGCATTGTGTTGGTGCAGGCAGGGGCATTTTCTATCC
GCAGCGGCGGTTGCAGGATGGGTGCTGCGGCTACTTCTGGCGGAATCGGC
CTTCCCATCCGCTCTGCCTTGCGTTGCCTAGGCATGACGCCCCCAAACAT
CTCCCTGCTGCTGGGCCGCAAGGGTGGGGCGGCGAGCAGCAGTGATGAGA
GTAGCCGCGAGATAGCTTCCTCGTGGATGCGTACCCGGGAGGTGCGCAAT
GGTTATACGTCGGACGGGCGTCGTCGCCTCCTGTCGATGGCTGAGCTGTT
CGCCAGCAAGGACAGCAGCAACGAGAAGAAGAGCCTCACCGATGGGACTT
TTGCTGCATCGGGCAACAAAAATCTCTTTTCTCGGGATGGAGTCTTCAAG
TTGGCGGGCTATGCGGCCGTGGCTTACATTGGCAAACAATTTTTCAACGG
GGGCCGGTACGATGACGAACCGGATCTGAGCGGCAAGGTGGCGGTCATCA
CAGGGGGTAATTCGGGCATCGGTAAGGAGACTGCCATTCGCCTTGCCACG
CTAGGAGCCCGTGTTTTGATCGCGTGCCGCAACTCTGAGAAGGGCGAGGC
GGCGGTGCGGGACATAGTGAACGCCGTTTCCCCCTCCTCTACAGTGGAAG
GCGCGAGCCGAAAGAAGAATGCCGCCCCGCCACAGGTGGAGAGCTTGGTG
ATGGACCTGTCGGACTTGAAAAGCATCGATCGTTTTGCGACGGAGTTGAA
CAAGCACGTGGATAAGGTCGATATTTTGGTGAACAATGCGGGGGTCATGG
CTGTGAGTAACTTAGAGCGGACCCAGGATGGCTTCGAGCGCCAATTGGGT
GTGAACCACTTAGGGCATTTCCACCTGACGAACCGTCTGTTTGACTTACT
GCTTAAAGGTGCGGCGACACGGGATGGGGCGCGGATTGTGAATGTGGCGA
GTGAAGCGCATCGTTTTGGAGGTTTGGACTTGCAGGACCCAAACTATCTG
ACCAGGGAATACAAAAAGTGGGAGGCGTATGGGCAAAGCAAACTGGCCAA
CATTCTGTTCACCCGCGAGCTGCACCGGCGCCTGGCCGAGAAGGGCATGG
ACAAAAAGGTGTTGGCTTTATGTTGTCATCCTGGGGTGGTCCGCACGGAA
CTAGGCCGGTATTTGATTGATGATATTCCCAGCGTCGGAAAGGTGGCCTT
GGCCCCCGTAGCGCTGGCTGGCTGGTACTTCACCAAGAGTCCCAAGCAAG
Ggtaggttggatgtcttaattaatcccaagtgagcaacactttgtcaatt
agtgcatctctcacacatatatatctttcttcctctcccaatccctcatc
ccctacaacagCTCGCAAACACAGGTCTACCTGGCCGCGAGCCCAACGCT
GAAAGACGAGGCGGAACGAGGAGCAGCGGTGGGCGGGACGTACTTCTCCG
ACTGCCGTCCCAAGAAGACGACTAAGGAGGCCGAAGATTTGGACGCGGCG
GGCAAGCTTTGGAAACTGAGTGAAAAGCTCACAGGGTCATCGTTCTCAGT
TTAG
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protein sequence of NO21G00370.1

>NO21G00370.1-protein ID=NO21G00370.1-protein|Name=NO21G00370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=498bp
MPQVLLPRRVLDLLPLTLLSLCIVLVQAGAFSIRSGGCRMGAAATSGGIG
LPIRSALRCLGMTPPNISLLLGRKGGAASSSDESSREIASSWMRTREVRN
GYTSDGRRRLLSMAELFASKDSSNEKKSLTDGTFAASGNKNLFSRDGVFK
LAGYAAVAYIGKQFFNGGRYDDEPDLSGKVAVITGGNSGIGKETAIRLAT
LGARVLIACRNSEKGEAAVRDIVNAVSPSSTVEGASRKKNAAPPQVESLV
MDLSDLKSIDRFATELNKHVDKVDILVNNAGVMAVSNLERTQDGFERQLG
VNHLGHFHLTNRLFDLLLKGAATRDGARIVNVASEAHRFGGLDLQDPNYL
TREYKKWEAYGQSKLANILFTRELHRRLAEKGMDKKVLALCCHPGVVRTE
LGRYLIDDIPSVGKVALAPVALAGWYFTKSPKQGSQTQVYLAASPTLKDE
AERGAAVGGTYFSDCRPKKTTKEAEDLDAAGKLWKLSEKLTGSSFSV*
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Synonyms
Publications