NO21G00240, NO21G00240 (gene) Nannochloropsis oceanica

Overview
NameNO21G00240
Unique NameNO21G00240
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2206
Alignment locationchr21:79010..81215 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:79010..81215 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G00240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL030nonsL030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR052ncniR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR061ngnoR061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G00240.1NO21G00240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606236gene_9511Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G00240.1NO21G00240.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G00240 ID=NO21G00240|Name=NO21G00240|organism=Nannochloropsis oceanica|type=gene|length=2206bp
ATGCCCTTGTGTGTTTCCTCCCCATCTTCCACCAGCAGTCGCTATCTTCA
TCTCAACAGAGACGGCAGCGACGACGACGACGACTTATTCGTACAATTGC
Ggtaagctcatctgtgcctccccaaattagccttcctcatgtggctcatc
ctccccccaaaaatcccttttcccttccatgtcacagGAATAGTCATCAT
GACCACCGAAATTACAATCAATGTCGCCTCCACTTTCAGCGCCATATTTT
CCATCAAGGCCAGCATCTACCTAATCTTGAACTCAAAATGCCGCTGCTGA
CCTTGGGGGCTCTTAACCCACGCTTGCAATCGCTCTACACCCACCTCTCG
TCGTCTTGCTGTCTTTCCTGCCCGCCATCAACACGGCCTCCACCTCCACT
TCTAGAATCTTGTAGTTTGAAGGGTATGCTATGTCTCTGCCGCGATAATA
ATCAGAAGCACCGTTCGTCAAAGCACTGTCGTTGTCGTCACCACCAGCAC
AATAAGGAGCAGTGTAGCAAGGAGAAGGAGAAAGAAAATGAGAAGGGCAT
CACGACCTTACATGCAGCCTGCCAAGCAAGGGAACGGCAGTGCCAGCAAA
AGAATGATTCGGTGGAGCAATCTCAGCGGCACTCTTCGGCGGCATCATGT
CGTTGTCGTCACCACCAGCACAATAAGGAGCAGTGTAGCAAGGAGAAGGA
GAAAGAAAATGAGAAGGGCATCACGACCTTACATGCAGCCTGCCAAGCAA
GGGAACGGCAGTGCCAGCAAAAGAATGATACGGTGGAGCAATCTCAGCGG
CACTCTTCGGCGGCGTCATGGAAGTGGCAGAAAAGGGATAAGTTAGAAGA
GAGGAAAGAGGAAGAGAGGAAGGAGGAAGTGAAAGATGGCAAACAAAGTA
GAGACCCGAAAAATCATTTTTTCGACTACCCTAGAGACTTTAACTTGTGT
GCATTTCATTGTTCCGCACCATCTCCCATTCCCCCCTCTGTGCTTCCAAC
CTCCCCACCACCAGCATACTGGCGTCCTGACGAAGAAAAGAGTGAAGATG
GTCAGGCCCTGGTACGAGGTCTCGAGGAAGAGgtaagcaagcttttctcg
caaagacacaatcattgtcgacgccagcccccaacagtctctttttctcc
atctccttctgctctgattcaccgaaagCATCAAGTGCTCCGGAAGCTGT
CGACGTTGGCATCTCCAACCACGTCGCCCATGCGGCAGCAGGAGAAGAGG
ATGCGACGAAAAGTCGACGGATATGAAGGACCGCCTTGGGTGCCACCGTA
AATGCGTGATGAAGGGGGGAGGTGGAAAGGATACAATGAAGGCAAGCAAG
AGGAAATAACCCATGATGCTACCCGAATATTTTTGGCGCGTTCTAGTAAG
GGCTAACCGTAACCCTATTGTTGTTGCACTTAAAGGCACAAAATTCTGTT
TCTGTTTTCAATCATTTCTATGACACTTCCAAGGATTGCAAGCACGCGAG
AGAAGGGGAGGAAAGAAGATAGAAAGAGGACAAGTGTGGCTACTTAAAAG
TCGAAAGGAGCCTCTTGTCGCACTCAATCAAACACAAGTGCGATTGAGAC
ATAGGACGAGTCACAGTATAGGACTCCTCATTTTGGCCCTCCCTCCGCGC
GGTGCCTTACCTTGTGTTCGCTTCTTGGACGTCTCGTTTACGCAATCACA
CTTTTGCAGCAGGTAATCCGTGTCCTAATCGACGCATTGAAAGGTGGGAC
ACCTTGTGCCAAGACTTTGCACTGCACCGTGTAGATTCACACGGAATGTC
GGAGATGAATGCGGCGGAGGCAGAGATGTCCGATGGAACAATTGTCTCCC
AAAAGCGTGCAGATTTGGGATAAAGGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAATGAGAGAGAGAGAGAATGAGAGAGAACAAGAGAGAGAGAG
AATGAGAGAGAGAGAGAGGGAGAGGGAGTGAGGGAGGGAGGGAGAGAGAG
GAGAGAGAAACTGGCAAAGCGTAAAGTAATTGGAGATTTATCATGATTAG
TGGTGGAAGGAGCATCAGCTGGAAGGAATACGATAAGTAATATCAGGAGT
CCAAAACTAGGGTATTTTTTAAAGTATATCGCACCGAAGTGAGCATCAGG
CTCAAGAGTTGGGTGCGAGAAAGATAGCTATGAAGAAAGAAGGTGATGGA
GCAACG
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protein sequence of NO21G00240.1

>NO21G00240.1-protein ID=NO21G00240.1-protein|Name=NO21G00240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=373bp
MPLCVSSPSSTSSRYLHLNRDGSDDDDDLFVQLRNSHHDHRNYNQCRLHF
QRHIFHQGQHLPNLELKMPLLTLGALNPRLQSLYTHLSSSCCLSCPPSTR
PPPPLLESCSLKGMLCLCRDNNQKHRSSKHCRCRHHQHNKEQCSKEKEKE
NEKGITTLHAACQARERQCQQKNDSVEQSQRHSSAASCRCRHHQHNKEQC
SKEKEKENEKGITTLHAACQARERQCQQKNDTVEQSQRHSSAASWKWQKR
DKLEERKEEERKEEVKDGKQSRDPKNHFFDYPRDFNLCAFHCSAPSPIPP
SVLPTSPPPAYWRPDEEKSEDGQALVRGLEEEHQVLRKLSTLASPTTSPM
RQQEKRMRRKVDGYEGPPWVPP*
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Synonyms
Publications