NO21G00240.1, NO21G00240.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO21G00240.1
Unique NameNO21G00240.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2024
Alignment locationchr21:79010..81215 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:79010..81215 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G00240.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G00240NO21G00240Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO21G00240.1NO21G00240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO21G00240.1.cds1NO21G00240.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO21G00240.1.cds2NO21G00240.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO21G00240.1.cds3NO21G00240.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO21G00240.1 ID=NO21G00240.1|Name=NO21G00240.1|organism=Nannochloropsis oceanica|type=mRNA|length=2024bp
ATGCCCTTGTGTGTTTCCTCCCCATCTTCCACCAGCAGTCGCTATCTTCA
TCTCAACAGAGACGGCAGCGACGACGACGACGACTTATTCGTACAATTGC
GGAATAGTCATCATGACCACCGAAATTACAATCAATGTCGCCTCCACTTT
CAGCGCCATATTTTCCATCAAGGCCAGCATCTACCTAATCTTGAACTCAA
AATGCCGCTGCTGACCTTGGGGGCTCTTAACCCACGCTTGCAATCGCTCT
ACACCCACCTCTCGTCGTCTTGCTGTCTTTCCTGCCCGCCATCAACACGG
CCTCCACCTCCACTTCTAGAATCTTGTAGTTTGAAGGGTATGCTATGTCT
CTGCCGCGATAATAATCAGAAGCACCGTTCGTCAAAGCACTGTCGTTGTC
GTCACCACCAGCACAATAAGGAGCAGTGTAGCAAGGAGAAGGAGAAAGAA
AATGAGAAGGGCATCACGACCTTACATGCAGCCTGCCAAGCAAGGGAACG
GCAGTGCCAGCAAAAGAATGATTCGGTGGAGCAATCTCAGCGGCACTCTT
CGGCGGCATCATGTCGTTGTCGTCACCACCAGCACAATAAGGAGCAGTGT
AGCAAGGAGAAGGAGAAAGAAAATGAGAAGGGCATCACGACCTTACATGC
AGCCTGCCAAGCAAGGGAACGGCAGTGCCAGCAAAAGAATGATACGGTGG
AGCAATCTCAGCGGCACTCTTCGGCGGCGTCATGGAAGTGGCAGAAAAGG
GATAAGTTAGAAGAGAGGAAAGAGGAAGAGAGGAAGGAGGAAGTGAAAGA
TGGCAAACAAAGTAGAGACCCGAAAAATCATTTTTTCGACTACCCTAGAG
ACTTTAACTTGTGTGCATTTCATTGTTCCGCACCATCTCCCATTCCCCCC
TCTGTGCTTCCAACCTCCCCACCACCAGCATACTGGCGTCCTGACGAAGA
AAAGAGTGAAGATGGTCAGGCCCTGGTACGAGGTCTCGAGGAAGAGCATC
AAGTGCTCCGGAAGCTGTCGACGTTGGCATCTCCAACCACGTCGCCCATG
CGGCAGCAGGAGAAGAGGATGCGACGAAAAGTCGACGGATATGAAGGACC
GCCTTGGGTGCCACCGTAAATGCGTGATGAAGGGGGGAGGTGGAAAGGAT
ACAATGAAGGCAAGCAAGAGGAAATAACCCATGATGCTACCCGAATATTT
TTGGCGCGTTCTAGTAAGGGCTAACCGTAACCCTATTGTTGTTGCACTTA
AAGGCACAAAATTCTGTTTCTGTTTTCAATCATTTCTATGACACTTCCAA
GGATTGCAAGCACGCGAGAGAAGGGGAGGAAAGAAGATAGAAAGAGGACA
AGTGTGGCTACTTAAAAGTCGAAAGGAGCCTCTTGTCGCACTCAATCAAA
CACAAGTGCGATTGAGACATAGGACGAGTCACAGTATAGGACTCCTCATT
TTGGCCCTCCCTCCGCGCGGTGCCTTACCTTGTGTTCGCTTCTTGGACGT
CTCGTTTACGCAATCACACTTTTGCAGCAGGTAATCCGTGTCCTAATCGA
CGCATTGAAAGGTGGGACACCTTGTGCCAAGACTTTGCACTGCACCGTGT
AGATTCACACGGAATGTCGGAGATGAATGCGGCGGAGGCAGAGATGTCCG
ATGGAACAATTGTCTCCCAAAAGCGTGCAGATTTGGGATAAAGGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAATGAGAGAGAGAGAGAATGAGAG
AGAACAAGAGAGAGAGAGAATGAGAGAGAGAGAGAGGGAGAGGGAGTGAG
GGAGGGAGGGAGAGAGAGGAGAGAGAAACTGGCAAAGCGTAAAGTAATTG
GAGATTTATCATGATTAGTGGTGGAAGGAGCATCAGCTGGAAGGAATACG
ATAAGTAATATCAGGAGTCCAAAACTAGGGTATTTTTTAAAGTATATCGC
ACCGAAGTGAGCATCAGGCTCAAGAGTTGGGTGCGAGAAAGATAGCTATG
AAGAAAGAAGGTGATGGAGCAACG
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protein sequence of NO21G00240.1

>NO21G00240.1-protein ID=NO21G00240.1-protein|Name=NO21G00240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=373bp
MPLCVSSPSSTSSRYLHLNRDGSDDDDDLFVQLRNSHHDHRNYNQCRLHF
QRHIFHQGQHLPNLELKMPLLTLGALNPRLQSLYTHLSSSCCLSCPPSTR
PPPPLLESCSLKGMLCLCRDNNQKHRSSKHCRCRHHQHNKEQCSKEKEKE
NEKGITTLHAACQARERQCQQKNDSVEQSQRHSSAASCRCRHHQHNKEQC
SKEKEKENEKGITTLHAACQARERQCQQKNDTVEQSQRHSSAASWKWQKR
DKLEERKEEERKEEVKDGKQSRDPKNHFFDYPRDFNLCAFHCSAPSPIPP
SVLPTSPPPAYWRPDEEKSEDGQALVRGLEEEHQVLRKLSTLASPTTSPM
RQQEKRMRRKVDGYEGPPWVPP*
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mRNA from alignment at chr21:79010..81215-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO21G00240.1 ID=NO21G00240.1|Name=NO21G00240.1|organism=Nannochloropsis oceanica|type=mRNA|length=2206bp|location=Sequence derived from alignment at chr21:79010..81215- (Nannochloropsis oceanica)
ATGCCCTTGTGTGTTTCCTCCCCATCTTCCACCAGCAGTCGCTATCTTCA
TCTCAACAGAGACGGCAGCGACGACGACGACGACTTATTCGTACAATTGC
GGTAAGCTCATCTGTGCCTCCCCAAATTAGCCTTCCTCATGTGGCTCATC
CTCCCCCCAAAAATCCCTTTTCCCTTCCATGTCACAGGAATAGTCATCAT
GACCACCGAAATTACAATCAATGTCGCCTCCACTTTCAGCGCCATATTTT
CCATCAAGGCCAGCATCTACCTAATCTTGAACTCAAAATGCCGCTGCTGA
CCTTGGGGGCTCTTAACCCACGCTTGCAATCGCTCTACACCCACCTCTCG
TCGTCTTGCTGTCTTTCCTGCCCGCCATCAACACGGCCTCCACCTCCACT
TCTAGAATCTTGTAGTTTGAAGGGTATGCTATGTCTCTGCCGCGATAATA
ATCAGAAGCACCGTTCGTCAAAGCACTGTCGTTGTCGTCACCACCAGCAC
AATAAGGAGCAGTGTAGCAAGGAGAAGGAGAAAGAAAATGAGAAGGGCAT
CACGACCTTACATGCAGCCTGCCAAGCAAGGGAACGGCAGTGCCAGCAAA
AGAATGATTCGGTGGAGCAATCTCAGCGGCACTCTTCGGCGGCATCATGT
CGTTGTCGTCACCACCAGCACAATAAGGAGCAGTGTAGCAAGGAGAAGGA
GAAAGAAAATGAGAAGGGCATCACGACCTTACATGCAGCCTGCCAAGCAA
GGGAACGGCAGTGCCAGCAAAAGAATGATACGGTGGAGCAATCTCAGCGG
CACTCTTCGGCGGCGTCATGGAAGTGGCAGAAAAGGGATAAGTTAGAAGA
GAGGAAAGAGGAAGAGAGGAAGGAGGAAGTGAAAGATGGCAAACAAAGTA
GAGACCCGAAAAATCATTTTTTCGACTACCCTAGAGACTTTAACTTGTGT
GCATTTCATTGTTCCGCACCATCTCCCATTCCCCCCTCTGTGCTTCCAAC
CTCCCCACCACCAGCATACTGGCGTCCTGACGAAGAAAAGAGTGAAGATG
GTCAGGCCCTGGTACGAGGTCTCGAGGAAGAGGTAAGCAAGCTTTTCTCG
CAAAGACACAATCATTGTCGACGCCAGCCCCCAACAGTCTCTTTTTCTCC
ATCTCCTTCTGCTCTGATTCACCGAAAGCATCAAGTGCTCCGGAAGCTGT
CGACGTTGGCATCTCCAACCACGTCGCCCATGCGGCAGCAGGAGAAGAGG
ATGCGACGAAAAGTCGACGGATATGAAGGACCGCCTTGGGTGCCACCGTA
AATGCGTGATGAAGGGGGGAGGTGGAAAGGATACAATGAAGGCAAGCAAG
AGGAAATAACCCATGATGCTACCCGAATATTTTTGGCGCGTTCTAGTAAG
GGCTAACCGTAACCCTATTGTTGTTGCACTTAAAGGCACAAAATTCTGTT
TCTGTTTTCAATCATTTCTATGACACTTCCAAGGATTGCAAGCACGCGAG
AGAAGGGGAGGAAAGAAGATAGAAAGAGGACAAGTGTGGCTACTTAAAAG
TCGAAAGGAGCCTCTTGTCGCACTCAATCAAACACAAGTGCGATTGAGAC
ATAGGACGAGTCACAGTATAGGACTCCTCATTTTGGCCCTCCCTCCGCGC
GGTGCCTTACCTTGTGTTCGCTTCTTGGACGTCTCGTTTACGCAATCACA
CTTTTGCAGCAGGTAATCCGTGTCCTAATCGACGCATTGAAAGGTGGGAC
ACCTTGTGCCAAGACTTTGCACTGCACCGTGTAGATTCACACGGAATGTC
GGAGATGAATGCGGCGGAGGCAGAGATGTCCGATGGAACAATTGTCTCCC
AAAAGCGTGCAGATTTGGGATAAAGGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAATGAGAGAGAGAGAGAATGAGAGAGAACAAGAGAGAGAGAG
AATGAGAGAGAGAGAGAGGGAGAGGGAGTGAGGGAGGGAGGGAGAGAGAG
GAGAGAGAAACTGGCAAAGCGTAAAGTAATTGGAGATTTATCATGATTAG
TGGTGGAAGGAGCATCAGCTGGAAGGAATACGATAAGTAATATCAGGAGT
CCAAAACTAGGGTATTTTTTAAAGTATATCGCACCGAAGTGAGCATCAGG
CTCAAGAGTTGGGTGCGAGAAAGATAGCTATGAAGAAAGAAGGTGATGGA
GCAACG
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Coding sequence (CDS) from alignment at chr21:79010..81215-

>NO21G00240.1 ID=NO21G00240.1|Name=NO21G00240.1|organism=Nannochloropsis oceanica|type=CDS|length=1119bp|location=Sequence derived from alignment at chr21:79010..81215- (Nannochloropsis oceanica)
ATGCCCTTGTGTGTTTCCTCCCCATCTTCCACCAGCAGTCGCTATCTTCA
TCTCAACAGAGACGGCAGCGACGACGACGACGACTTATTCGTACAATTGC
GGAATAGTCATCATGACCACCGAAATTACAATCAATGTCGCCTCCACTTT
CAGCGCCATATTTTCCATCAAGGCCAGCATCTACCTAATCTTGAACTCAA
AATGCCGCTGCTGACCTTGGGGGCTCTTAACCCACGCTTGCAATCGCTCT
ACACCCACCTCTCGTCGTCTTGCTGTCTTTCCTGCCCGCCATCAACACGG
CCTCCACCTCCACTTCTAGAATCTTGTAGTTTGAAGGGTATGCTATGTCT
CTGCCGCGATAATAATCAGAAGCACCGTTCGTCAAAGCACTGTCGTTGTC
GTCACCACCAGCACAATAAGGAGCAGTGTAGCAAGGAGAAGGAGAAAGAA
AATGAGAAGGGCATCACGACCTTACATGCAGCCTGCCAAGCAAGGGAACG
GCAGTGCCAGCAAAAGAATGATTCGGTGGAGCAATCTCAGCGGCACTCTT
CGGCGGCATCATGTCGTTGTCGTCACCACCAGCACAATAAGGAGCAGTGT
AGCAAGGAGAAGGAGAAAGAAAATGAGAAGGGCATCACGACCTTACATGC
AGCCTGCCAAGCAAGGGAACGGCAGTGCCAGCAAAAGAATGATACGGTGG
AGCAATCTCAGCGGCACTCTTCGGCGGCGTCATGGAAGTGGCAGAAAAGG
GATAAGTTAGAAGAGAGGAAAGAGGAAGAGAGGAAGGAGGAAGTGAAAGA
TGGCAAACAAAGTAGAGACCCGAAAAATCATTTTTTCGACTACCCTAGAG
ACTTTAACTTGTGTGCATTTCATTGTTCCGCACCATCTCCCATTCCCCCC
TCTGTGCTTCCAACCTCCCCACCACCAGCATACTGGCGTCCTGACGAAGA
AAAGAGTGAAGATGGTCAGGCCCTGGTACGAGGTCTCGAGGAAGAGCATC
AAGTGCTCCGGAAGCTGTCGACGTTGGCATCTCCAACCACGTCGCCCATG
CGGCAGCAGGAGAAGAGGATGCGACGAAAAGTCGACGGATATGAAGGACC
GCCTTGGGTGCCACCGTAA
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Synonyms
Publications