NO21G00210, NO21G00210 (gene) Nannochloropsis oceanica

Overview
NameNO21G00210
Unique NameNO21G00210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2786
Alignment locationchr21:63311..66096 -

Link to JBrowse

Properties
Property NameValue
DescriptionTranscription initiation factor TFIIH subunit H1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:63311..66096 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006289nucleotide-excision repair
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0000439transcription factor TFIIH core complex
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR027079Tfb1/p62
IPR005607BSD
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
Homology
[Close]
BLAST of NO21G00210 vs. NCBI_GenBank
Match: EWM22539.1 (transcription initiation factor TFIIH subunit H1 [Nannochloropsis gaditana])

HSP 1 Score: 175.3 bits (443), Expect = 6.900e-40
Identity = 126/153 (82.35%), Postives = 135/153 (88.24%), Query Frame = 0 
Query:  195 MDEMERETRRKLLAENPDLREQHTQMVGDGLIDEEDFWNARRKLLLDEEGRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTTICLKARDVQFLFELYPALKELYQKKVPEEMEERVFWSQVLRSIQFHKQRFEAHIEDE 348
            MD MERETRR+LL  NP+LREQHTQMVG+GLIDEEDFWNARR+LL++E+G+ R         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +ICLKARDVQFLF LYPALK LYQKKVPEEMEER FWSQVLRSIQFHKQRFEAHIEDE
Sbjct:    1 MDTMERETRRRLLMANPELREQHTQMVGEGLIDEEDFWNARRRLLVEEQGKTR---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSICLKARDVQFLFALYPALKTLYQKKVPEEMEERTFWSQVLRSIQFHKQRFEAHIEDE 144
[Close]
BLAST of NO21G00210 vs. NCBI_GenBank
Match: XP_024579923.1 (general transcription factor iih [Plasmopara halstedii] >CEG43554.1 general transcription factor iih [Plasmopara halstedii])

HSP 1 Score: 74.7 bits (182), Expect = 1.300e-9
Identity = 54/167 (32.34%), Postives = 72/167 (43.11%), Query Frame = 0 
Query:  189 SQLRARMDEMERETRRKLLAENPDLREQHTQMVGDGLIDEEDFWNARRKLLLDEEGRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTTICLKARDVQFLFELYPALKELYQKKVPEEMEERVFWSQVLRSIQFHKQRFEAHIEDEFSRARELG 356
            S   A  +  E + R  LLA NP L+ QHT+MV DGLI EEDFW +RR L+  E  +R+                                             L A  +  +F  YPA+   YQ++VP++M E  FW    +S  FH+ R   H ED FS+  E G
Sbjct:  114 SNSAALCNPTEIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKRQKTAKTSAILTDLAANNDSGGNVVKYN-------------------LNAEVIHQIFTQYPAVYMAYQEQVPDKMTETEFWGAFFKSKYFHRDRKAGH-EDMFSKYEEKG 260
[Close]
BLAST of NO21G00210 vs. NCBI_GenBank
Match: XP_002906590.1 (general transcription factor IIH subunit, putative [Phytophthora infestans T30-4] >EEY65991.1 general transcription factor IIH subunit, putative [Phytophthora infestans T30-4])

HSP 1 Score: 73.9 bits (180), Expect = 2.200e-9
Identity = 54/170 (31.76%), Postives = 73/170 (42.94%), Query Frame = 0 
Query:  184 AKTTASQLRARMDEMERETRRKLLAENPDLREQHTQMVGDGLIDEEDFWNARRKLLLDEEGRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTTICLKARDVQFLFELYPALKELYQKKVPEEMEERVFWSQVLRSIQFHKQRFEAHIEDEFSRARE 354
            A  T S   A  +  E + R  LLA NP L+ QHT+MV DGLI EEDFW +RR L+  E  +R+                                             L A  +  +F  YPA+   YQ +VP++M E  FW    +S  FH++R   H ED F++  E
Sbjct:  108 ASGTRSNAAALCNPTEIKQRAALLAANPTLKRQHTEMVNDGLISEEDFWASRRHLIAGEASKRQKTGKTSAILTDLAADNDAGGNVVKYN-------------------LNAEVIHQIFIQYPAVYRAYQGQVPDKMTETEFWGAFFKSKYFHRERKAGH-EDMFTKYEE 257
[Close]
BLAST of NO21G00210 vs. NCBI_GenBank
Match: CCA17600.1 (general transcription factor IIH subunit putative [Albugo laibachii Nc14])

HSP 1 Score: 73.2 bits (178), Expect = 3.700e-9
Identity = 50/158 (31.65%), Postives = 70/158 (44.30%), Query Frame = 0 
Query:  196 DEMERETRRKLLAENPDLREQHTQMVGDGLIDEEDFWNARRKLLLDEEGRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTTICLKARDVQFLFELYPALKELYQKKVPEEMEERVFWSQVLRSIQFHKQRFEAHIEDEFSRARE 354
            + +E + R  LLA N +L+ QHT+MV  GLI EEDFW ARR LL +E  +R+                                             L A  +  +F  YPA+   YQ +VP+++ E  FWS   +S  FH+ R   H ED F++  E
Sbjct:  128 NSLEIKQRAALLASNSNLKRQHTEMVNQGLISEEDFWQARRHLLANEASKRQKTGKTSALLTDLAGQNEDGGNVVKYN-------------------LNAEVIHQIFVQYPAIHLAYQDQVPDKLSETEFWSAFFKSKYFHRDRKAGH-EDLFTKYEE 265
[Close]
BLAST of NO21G00210 vs. NCBI_GenBank
Match: XP_008903680.1 (hypothetical protein PPTG_10151 [Phytophthora parasitica INRA-310] >ETI48962.1 hypothetical protein F443_07065 [Phytophthora parasitica P1569] >ETL95393.1 hypothetical protein L917_06785 [Phytophthora parasitica] >ETM48596.1 hypothetical protein L914_06882 [Phytophthora parasitica] >ETN11201.1 hypothetical protein PPTG_10151 [Phytophthora parasitica INRA-310])

HSP 1 Score: 72.8 bits (177), Expect = 4.800e-9
Identity = 54/170 (31.76%), Postives = 72/170 (42.35%), Query Frame = 0 
Query:  184 AKTTASQLRARMDEMERETRRKLLAENPDLREQHTQMVGDGLIDEEDFWNARRKLLLDEEGRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTTICLKARDVQFLFELYPALKELYQKKVPEEMEERVFWSQVLRSIQFHKQRFEAHIEDEFSRARE 354
            A  T S   A  +  E + R  LLA NP L+ QHT+MV DGLI EEDFW +RR L+  E  +R+                                             L A  +  +F  YPA+   YQ +VP++M E  FW    +S  FH+ R   H ED F++  E
Sbjct:  109 ASGTRSNAAALCNPTEIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKRQKTGKTSAILTDLAADNDSGGNVVKYN-------------------LNAEVIHQIFIQYPAVYRAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAGH-EDMFTKYEE 258
[Close]
BLAST of NO21G00210 vs. NCBI_GenBank
Match: ETK88825.1 (hypothetical protein L915_06964 [Phytophthora parasitica] >ETL42220.1 hypothetical protein L916_06916 [Phytophthora parasitica])

HSP 1 Score: 72.8 bits (177), Expect = 4.800e-9
Identity = 54/170 (31.76%), Postives = 72/170 (42.35%), Query Frame = 0 
Query:  184 AKTTASQLRARMDEMERETRRKLLAENPDLREQHTQMVGDGLIDEEDFWNARRKLLLDEEGRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTTICLKARDVQFLFELYPALKELYQKKVPEEMEERVFWSQVLRSIQFHKQRFEAHIEDEFSRARE 354
            A  T S   A  +  E + R  LLA NP L+ QHT+MV DGLI EEDFW +RR L+  E  +R+                                             L A  +  +F  YPA+   YQ +VP++M E  FW    +S  FH+ R   H ED F++  E
Sbjct:  109 ASGTRSNAAALCNPTEIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKRQKTGKTSAILTDLAADNDSGGNVVKYN-------------------LNAEVIHQIFIQYPAVYRAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAGH-EDMFTKYEE 258
[Close]
BLAST of NO21G00210 vs. NCBI_GenBank
Match: ETO77690.1 (hypothetical protein F444_07134 [Phytophthora parasitica P1976] >ETP46638.1 hypothetical protein F442_07132 [Phytophthora parasitica P10297])

HSP 1 Score: 72.8 bits (177), Expect = 4.800e-9
Identity = 54/170 (31.76%), Postives = 72/170 (42.35%), Query Frame = 0 
Query:  184 AKTTASQLRARMDEMERETRRKLLAENPDLREQHTQMVGDGLIDEEDFWNARRKLLLDEEGRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTTICLKARDVQFLFELYPALKELYQKKVPEEMEERVFWSQVLRSIQFHKQRFEAHIEDEFSRARE 354
            A  T S   A  +  E + R  LLA NP L+ QHT+MV DGLI EEDFW +RR L+  E  +R+                                             L A  +  +F  YPA+   YQ +VP++M E  FW    +S  FH+ R   H ED F++  E
Sbjct:  127 ASGTRSNAAALCNPTEIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKRQKTGKTSAILTDLAADNDSGGNVVKYN-------------------LNAEVIHQIFIQYPAVYRAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAGH-EDMFTKYEE 276
[Close]
BLAST of NO21G00210 vs. NCBI_GenBank
Match: ETP18717.1 (hypothetical protein F441_07078 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 72.8 bits (177), Expect = 4.800e-9
Identity = 54/170 (31.76%), Postives = 72/170 (42.35%), Query Frame = 0 
Query:  184 AKTTASQLRARMDEMERETRRKLLAENPDLREQHTQMVGDGLIDEEDFWNARRKLLLDEEGRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTTICLKARDVQFLFELYPALKELYQKKVPEEMEERVFWSQVLRSIQFHKQRFEAHIEDEFSRARE 354
            A  T S   A  +  E + R  LLA NP L+ QHT+MV DGLI EEDFW +RR L+  E  +R+                                             L A  +  +F  YPA+   YQ +VP++M E  FW    +S  FH+ R   H ED F++  E
Sbjct:  109 ASGTRSNAAALCNPTEIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKRQKTGKTSAILTDLAADNDSGGNVVKYN-------------------LNAEVIHQIFIQYPAVYRAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAGH-EDMFTKYEE 258
[Close]
BLAST of NO21G00210 vs. NCBI_GenBank
Match: KUF79770.1 (General transcription factor IIH subunit 1 [Phytophthora nicotianae])

HSP 1 Score: 72.8 bits (177), Expect = 4.800e-9
Identity = 54/170 (31.76%), Postives = 72/170 (42.35%), Query Frame = 0 
Query:  184 AKTTASQLRARMDEMERETRRKLLAENPDLREQHTQMVGDGLIDEEDFWNARRKLLLDEEGRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTTICLKARDVQFLFELYPALKELYQKKVPEEMEERVFWSQVLRSIQFHKQRFEAHIEDEFSRARE 354
            A  T S   A  +  E + R  LLA NP L+ QHT+MV DGLI EEDFW +RR L+  E  +R+                                             L A  +  +F  YPA+   YQ +VP++M E  FW    +S  FH+ R   H ED F++  E
Sbjct:  109 ASGTRSNAAALCNPTEIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKRQKTGKTSAILTDLAADNDSGGNVVKYN-------------------LNAEVIHQIFIQYPAVYRAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAGH-EDMFTKYEE 258
[Close]
BLAST of NO21G00210 vs. NCBI_GenBank
Match: POM62961.1 (General transcription factor IIH subunit, partial [Phytophthora palmivora var. palmivora])

HSP 1 Score: 72.8 bits (177), Expect = 4.800e-9
Identity = 54/170 (31.76%), Postives = 73/170 (42.94%), Query Frame = 0 
Query:  184 AKTTASQLRARMDEMERETRRKLLAENPDLREQHTQMVGDGLIDEEDFWNARRKLLLDEEGRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTTICLKARDVQFLFELYPALKELYQKKVPEEMEERVFWSQVLRSIQFHKQRFEAHIEDEFSRARE 354
            A+ T S   A  +  E + R  LLA NP L+ QHT+MV DGLI EEDFW +RR L+  E  +R+                                             L A  +  +F  YPA+   YQ +VP++M E  FW    +S  FH+ R   H ED F++  E
Sbjct:  108 ARGTRSNAAALCNPTEIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKRQKTGKTSAILTDLAADNEGGNVVKYN--------------------LNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAGH-EDMFTKYEE 256
The following BLAST results are available for this feature:
BLAST of NO21G00210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22539.16.900e-4082.35transcription initiation factor TFIIH subunit H1 [... [more]
XP_024579923.11.300e-932.34general transcription factor iih [Plasmopara halst... [more]
XP_002906590.12.200e-931.76general transcription factor IIH subunit, putative... [more]
CCA17600.13.700e-931.65general transcription factor IIH subunit putative ... [more]
XP_008903680.14.800e-931.76hypothetical protein PPTG_10151 [Phytophthora para... [more]
ETK88825.14.800e-931.76hypothetical protein L915_06964 [Phytophthora para... [more]
ETO77690.14.800e-931.76hypothetical protein F444_07134 [Phytophthora para... [more]
ETP18717.14.800e-931.76hypothetical protein F441_07078 [Phytophthora para... [more]
KUF79770.14.800e-931.76General transcription factor IIH subunit 1 [Phytop... [more]
POM62961.14.800e-931.76General transcription factor IIH subunit, partial ... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL030nonsL030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR093ncniR093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR052ncniR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR061ngnoR061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G00210.1NO21G00210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|634322gene_11027Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101012g2gene7902Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G00210.1NO21G00210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G00210 ID=NO21G00210|Name=NO21G00210|organism=Nannochloropsis oceanica|type=gene|length=2786bp
GAAAAGCTTCTTCCATAAAGTATAGGGTCAGTGTAAGCTCCCGCCTGGCA
GCAGCAGCATCATTACGGCCCCCTGCTGTCCGCCGTCCGTATCTCAAGGC
GGAGGCAAAGGTAGCAACCGCGCGCTGAGCACTGGAAATAGAAACCACTA
ACAGGAGGAGTAGAGTCTTGGTTTATTTGGTTCTTCATCATTTGCTCCAG
CACAAGAACAGAGCGTATGAACCATGATGGCCACGCATGACCTCTGGAAG
GCCCGATGCGAGATGGGCAAGAAGAAAGGTGTCATCACCCTGGCGGATGA
CGGTCTCTACTGGCAGCAGGACGGgtacgtgtgggtatgaaaatatatct
cgctgtctcacgcatgctcattttcttctgtccctatttccctcgcttcc
ctccgtcagCTCCTCCTCCCCTAGCAAGCTCCTCGCGTGGAACGACGTGA
GCCAGCACATGATCAGCAAGCCCCCTCGTGCCATGGTACGTGTGGAGCTA
GCTCGTGGAGGGGACGTGCGTTTCGAGGTCTCTCCGCTGCCTTCTACAGC
GGAAGGAGGAGGGGGAGGGGAAGGAGGAGAGAAAGGGGGAGGGCAGCAGA
CAGCCCGGGGCTTGTGTGAGGCGGCCAAGGAAGTGATTGGTGCTGCCCGC
CGGCAGGCACGAGCAGCTGTCGCCTCGTCCTCGTCTTCCTCTGCTGCTGG
TACTCCTGCAAATGAAGGAGGGAAAGGGGGAAAGGGGGGAAAAGCAGACA
ACAGCAGCAGCAGCAGCAGCAGCGGGGGCGGCGGAGGTAGTTCTGCAGGG
TGGAGAAGCGACGAGTTGCAGCGGAAGGCAGCTGTAGCGAAAGGAAGGGC
CGAAATTGCAAAGACTACGGCCTCTCAACTGAGGGCGAGGATGGACGAGA
TGGAAAGGGAGACAAGGAGGAAGCTGCTGGCAGAGAACCCGGACTTGAGG
GAGCAGCACACGCAGgtagggagggaaggagggagggagagggagggaag
ggggaaggccacaaaccatgatagatgcccacagatcacccgcattcatt
acgacttggtgtcatattccttccttcgcgcccttccccttaccctcctt
cagATGGTTGGCGACGGTTTGATCGACGAAGAAGACTTTTGGAACGCCCG
TCGGAAGCTGCTTCTGGACGAGGAGGGCCGGCGGAGGGGAAAACAGACGG
GGCTACCCTCCAATATACTCGCGGAGATCGAGGCACGAGCCATGGAGGGA
GGGTCAGAGGGGGGGAAGGAGGGGGGGAAAGGAGGAGGAGGAGGAGGAGG
GGGAGGGAAGACAACCATTTGCTTGAAGGCGCGAGACGTTCAATTTTTGT
TCGAGCTCTATCCGGCTTTGAAAGAGCTGTACCAGAAGAAGgtaggtagg
taggtcgggagggagggagggaggaagggagggaagcagggagggaggga
atgagggagggaggaagggagggaaggagggagggagggaaggagggagg
gattgattttgagcaatgagaaatcatgctcttgcagtgggccacgaaag
caccaccctcaccctcttttctgtccctccttctctttctccctcccttc
ccatccgtagGTGCCAGAGGAGATGGAGGAGAGAGTGTTCTGGTCGCAGG
TCTTAAGGAGCATTCAGTTCCATAAGCAACGGTTCGAGGCCCATATCGAG
GACGAATTCTCCCGAGCCCGGGAATTAGGGGGAGGAGGGGGAGGAGGAGG
AGGGGGAGGAGGGAGGGAGGGATGGAAGGAGGGAGGAAAGGATGGGGGAG
AGAAGGCTCGGAATAGCCTGTGGAGAGAGGTGGATCCCGTCTTTGACTTG
ATGTCGGGGCAAGGTGCCGAGGGAGGGAGCTGGGGAGGGAGTACAAGCAG
TGGGATGCTGGGAGGGAGGGGGGCAGGAAGGGAGGAGGAGACGGGAGGCA
GCAAGGCAGGTGAGGAGGTGGTGAAGAAGTACAACCGTCAGGCGTCGCTG
TTGGTGAAGAGCAGGCACCGGACGACGGTGGATGAACACGTGGACATGCC
GGACTTGCATGCTTGGTTTGGGGAGATGGAGGGGGAGGCGGGGGAGGAAG
GGGGAGGAGAAGAGGGAGGGAGGGAGGGAGGGAGGAGAAGGAAGTTCGCA
CGGTTGGAGTTGAGGAATCGGGGTCTATATACCTCGGCCATGGGAGGGGA
GGAAGAGGGGGAGGGGGAGGAAGGGGGGGAGGAAGGGGGGCAGGGATGGA
GGGAGGCGGACATGTCGAAGTTTGATTTGCGGAGGTACACGCCAGATTTA
CCATCGGCCCTCCCTTCCTCCCTCGCGGCTGCGGCGGTTTTGGGGGAGCT
AACGGCCAAGGTGTTGAAGGAGGGGGAAGGAGGGAGGGAAGGAGGGGTGG
AGGGGGAGGAGAGGGAGAGGGAGGTGCAGAAGGACCTGCCTAGGGCGTAC
GTGGAGTTTGTGAGGGTATCGGAATTGCTCAGACATTTTCACGCGTTCTT
CTTGCGGCTGAAGAGGGAAGGAGGGAGGGAGGAGGGGAGGGAGGAGGTGA
AGCAAAAGCTGGAGAGGTTGGTGGCGAAGATCGAGAGCAAGCAGAAGGAG
CTGGCCAGGACGAGGAGGGGATTGTGGAATGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGGGGCACCTAGGCTAGCGGCGATGCTGCTGCCGT
TTCAGAGGCAGTTGGAGCATGCCATGGACCTGTACGACTCGTATTTTAGA
GATTTGGCCACCACTGCCCCTGCTATTACTTTTTAG
back to top

protein sequence of NO21G00210.1

>NO21G00210.1-protein ID=NO21G00210.1-protein|Name=NO21G00210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=707bp
MMATHDLWKARCEMGKKKGVITLADDGLYWQQDGSSSPSKLLAWNDVSQH
MISKPPRAMVRVELARGGDVRFEVSPLPSTAEGGGGGEGGEKGGGQQTAR
GLCEAAKEVIGAARRQARAAVASSSSSSAAGTPANEGGKGGKGGKADNSS
SSSSSGGGGGSSAGWRSDELQRKAAVAKGRAEIAKTTASQLRARMDEMER
ETRRKLLAENPDLREQHTQMVGDGLIDEEDFWNARRKLLLDEEGRRRGKQ
TGLPSNILAEIEARAMEGGSEGGKEGGKGGGGGGGGGKTTICLKARDVQF
LFELYPALKELYQKKVPEEMEERVFWSQVLRSIQFHKQRFEAHIEDEFSR
ARELGGGGGGGGGGGGREGWKEGGKDGGEKARNSLWREVDPVFDLMSGQG
AEGGSWGGSTSSGMLGGRGAGREEETGGSKAGEEVVKKYNRQASLLVKSR
HRTTVDEHVDMPDLHAWFGEMEGEAGEEGGGEEGGREGGRRRKFARLELR
NRGLYTSAMGGEEEGEGEEGGEEGGQGWREADMSKFDLRRYTPDLPSALP
SSLAAAAVLGELTAKVLKEGEGGREGGVEGEEREREVQKDLPRAYVEFVR
VSELLRHFHAFFLRLKREGGREEGREEVKQKLERLVAKIESKQKELARTR
RGLWNEGGREGGREGGRGAPRLAAMLLPFQRQLEHAMDLYDSYFRDLATT
APAITF*
back to top
Synonyms
Publications