NO21G00070, NO21G00070 (gene) Nannochloropsis oceanica

Overview
NameNO21G00070
Unique NameNO21G00070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3193
Alignment locationchr21:19043..22235 +

Link to JBrowse

Properties
Property NameValue
DescriptionCyclic nucleotide-binding domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:19043..22235 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR018490cNMP-bd-like
IPR000595cNMP-bd_dom
IPR006916Popeye_prot
Homology
BLAST of NO21G00070 vs. NCBI_GenBank
Match: XP_005855612.1 (cyclic nucleotide-binding domain protein, partial [Nannochloropsis gaditana CCMP526] >EKU20743.1 cyclic nucleotide-binding domain protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 480.3 bits (1235), Expect = 6.300e-132
Identity = 246/348 (70.69%), Postives = 278/348 (79.89%), Query Frame = 0
Query:   85 KFGPPKGGHALLHFGNACALLSFSMTDVFLLRSLAMVATTCGVIYNITHSPPLRVPAIWGLVFLTVNGTMILSLLMEDKEIAFSKEELVLFEEHFLPYSLTPTQFRKLIAIAQWKEVPAGTTLAEEGERLTHLILISKGKVAAFVNQV------------------PIQSFSTFPGAKDMETNKGIDSGAWIGEINFLDEEKKAKGAIATFVTESPTRFVCWEHARLKGLLLDDAKLSRSVTHAINGALIGKLLSFTNQTKDASTEAYSEIMTTVLVDHRVEPSEKAFIREYRKKHGITEAVHSETLAKLGWTTEEFEDGSKHDKAFNQETVGALRRINEGLIRRQTI 415
            KFGPPKGGHALLHFGN CALLSFSMTDVFLLRSLA+VATTCGV+YN+THSPPLR+PA+WG+VFL VNGTMILSLL ED+EIAFSKEEL LFEEHFLPY+LTPTQFR+L++ A+WK+VPAGT LA EGE L  L+LI++GKVAAFVN V                  PIQSFSTFPGA++ E N+G+DSGAWIGEINFLD+EKK                              D  LSRSVTHAINGALIGKLLSFT+ TK+A++EAY EIM TVLVD+RVEPSEKAFIREYR+KHGI++AVH ETLAKLGW  EEF+DGSKHDKAF+ ETVGAL+RINEGLIRRQTI
Sbjct:   27 KFGPPKGGHALLHFGNTCALLSFSMTDVFLLRSLALVATTCGVVYNLTHSPPLRIPALWGMVFLAVNGTMILSLLFEDEEIAFSKEELELFEEHFLPYTLTPTQFRRLLSTAEWKDVPAGTALAVEGEPLDRLVLIARGKVAAFVNGVGGKEGQRRREGKQGVGGIPIQSFSTFPGARETEINQGMDSGAWIGEINFLDQEKK------------------------------DTNLSRSVTHAINGALIGKLLSFTSHTKEANSEAYEEIMATVLVDNRVEPSEKAFIREYRQKHGISDAVHRETLAKLGWKVEEFQDGSKHDKAFSHETVGALQRINEGLIRRQTI 344          
BLAST of NO21G00070 vs. NCBI_GenBank
Match: EWM20664.1 (Cyclic nucleotide-binding domain protein [Nannochloropsis gaditana])

HSP 1 Score: 382.1 bits (980), Expect = 2.300e-102
Identity = 189/256 (73.83%), Postives = 214/256 (83.59%), Query Frame = 0
Query:   86 FGPPKGGHALLHFGNACALLSFSMTDVFLLRSLAMVATTCGVIYNITHSPPLRVPAIWGLVFLTVNGTMILSLLMEDKEIAFSKEELVLFEEHFLPYSLTPTQFRKLIAIAQWKEVPAGTTLAEEGERLTHLILISKGKVAAFVNQVPIQSFSTFPGAKDMETNKGIDSGAWIGEINFLDEEKKAKGAIATFVTESPTRFVCWEHARLKGLLLDDAKLSRSVTHAINGALIGKLLSFTNQTKDASTEAYSEIMTTV 342
            FGPPKGGHALLHFGN CALLSFSMTDVFLLRSLA+VATTCGV+YN+THSPPLR+PA+WG+VFL VNGTMILSLL ED+EIAFSKEEL LFEEHFLPY+LTPTQFR+L++ A+WK+VPAGT LA EGE L  L+LI++GKVAAFVN V                      GAWIGEINFLD+EKKAKGAIATFV ESP R++CWEH RL+GLL +D  LSRSVTHAINGALIGKLLSFT+ TK+A++EAY EIM TV
Sbjct:  103 FGPPKGGHALLHFGNTCALLSFSMTDVFLLRSLALVATTCGVVYNLTHSPPLRIPALWGMVFLAVNGTMILSLLFEDEEIAFSKEELELFEEHFLPYTLTPTQFRRLLSTAEWKDVPAGTALAVEGEPLDRLVLIARGKVAAFVNGV----------------------GAWIGEINFLDQEKKAKGAIATFVAESPVRYLCWEHKRLRGLLSEDTNLSRSVTHAINGALIGKLLSFTSHTKEANSEAYEEIMATV 336          
BLAST of NO21G00070 vs. NCBI_GenBank
Match: GAQ87613.1 (hypothetical protein KFL_003650040 [Klebsormidium nitens])

HSP 1 Score: 168.7 bits (426), Expect = 4.000e-38
Identity = 103/320 (32.19%), Postives = 165/320 (51.56%), Query Frame = 0
Query:  109 MTDVFLLRSLAMVATTCGVIYNITHSPPLRVPAIWGLVFLTVNGTMILSLLMEDKEIAFSKEELVLFEEHFLPYSLTPTQFRKLI--AIAQWKEVPAGTTLAEEGERLTHLILISKGKVAAFVNQVPIQSFSTFPGAKDMETNKGIDSGAWIGEINFLDEEKKAKG--AIATFVTESPTRFVCWEHARLKGLLLDDAKLSRSVTHAINGALIGKLLSFTNQTKDASTEAYSEIMTTVLVDHRVEPSEKAFIREYRKKHGITEAVHSETLAKLGWTTEEFEDGSKHDKAFNQETVGALRRINEGLIRRQTIMAQDEDEEQA 425
            M D+  LRS  +    CG+ +N+    P+ +P++WG VFL +N T I  LL+E +E+ FS +EL +FE  F  + +T  QF+KL+  A A+W+E+P    + ++G+++  + LI  G     VN   +                 +  G+ +GE   L     AKG  A AT  T  PT+ V W+  +L+ +L +D  L  SV+  IN  L  KL    N +KD S E Y +++  +    RV P EK  +RE+R++HGI  + H   + ++GWT +E++DG+KH         G L R+     RR+ +   ++    A
Sbjct:    1 MKDMLFLRSFMVCGGICGITFNMLQPTPMYIPSMWGCVFLLINLTQIGILLLERREVEFSSDELDVFELEFQRHGVTACQFKKLMRYAEAEWRELPTDHVILKQGDQVDDIYLIISGCAEVTVNGGAVGQ---------------VQRGSLVGETALL-----AKGHLAGATVTTLVPTKVVVWDKHKLRQVLANDPSLILSVSATINSDLATKLAK-RNLSKDRSLETYKDVLGGICSAGRVSPEEKKALREFRQRHGIRPSEHEAAVREIGWTLDEYDDGAKHHSG---RLAGLLSRVPRWTGRRKALQTMEQSPHPA 296          
BLAST of NO21G00070 vs. NCBI_GenBank
Match: GBG30116.1 (Blood vessel epicardial substance [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 120.9 bits (302), Expect = 9.700e-24
Identity = 83/302 (27.48%), Postives = 135/302 (44.70%), Query Frame = 0
Query:   95 LLHFGNACALLSFSMTDVFLLRSLAMVATTCGVIYNITHSPPLRVPAIWGLVFLTVNGTMILSLLMEDKEIAFSKEELVLFEEHFLPYSLTPTQFRKLI--AIAQWKEVPAGTTLAEEGERLTHLILISKGKVAAFVNQVPIQSFSTFPGAKDMETNKGIDSGAWIGEINFLDEEKKAKGAIATFVTESPTRFVCWEHARLKGLLLDDAKL----SRSVTHAINGALIGKLLSFTNQTKDASTEAYSEIMTTVLVDHRVEPSEKAF-------IREYRKKHGITEAVHSETLAKLGWTTEEF 384
            +LH GN  A+ + S  D+  LRS    A+ C + +N+  + PL  PA WGL FL ++   I  +L+E + +A S++E  L+ + F+ Y  TP  F+KL+  + A W+ +  G  + +EG        +  G V  +   V +      PG    ET+ G  +  W  +I    EE+  +    T V  S  R V ++  +    +  D +L     R     + G L G     T Q  D   +  +++  + L   R+  S+           REYR +HGIT+  H   L  +GW   +F
Sbjct:   25 ILHAGNVLAVGAASSEDMLQLRSFMACASGCSIGFNLLQARPLLAPAAWGLFFLGLHSYHIRRILLEREPLALSQDEHELYSQAFMTYGFTPRSFKKLLKGSTATWETIKPGEPIVKEGHNQPRAAYVLSGSVLVYAGNVLMNRVDVTPG----ETHGGWTTHPWRSDI----EERGIRKWKTTVVAASNVRLVSFDIRKFSTFIKQDPQLMAAADRLQIDDLRGKLRGSHAEKTRQIDDLKAQLDAQVEASYLAMVRLAVSDGVLTRHEIERCREYRVQHGITDEQHKRVLRSVGWCHADF 318          
BLAST of NO21G00070 vs. NCBI_GenBank
Match: CEP01676.1 (hypothetical protein PBRA_008618 [Plasmodiophora brassicae])

HSP 1 Score: 109.0 bits (271), Expect = 3.800e-20
Identity = 89/315 (28.25%), Postives = 139/315 (44.13%), Query Frame = 0
Query:   97 HFGNACALLSFSMTDVFLLRSLAMVATTCGVIYNI--THSPPLRVPAIWGLVFLTVNGTMILSLLMEDKEI-AFSKEELVLFEEHFLPYSLTPTQFRKLIAIAQWKEVPAGTTLAEEGERLTHLILISKGKVAAFVNQVPIQSFSTFPGAKDMETNKGIDSGAWIGE--INFLDEEKKAKGAIATFVTESPTRFVCWEHARLKGLLLDDAKLSRSVTHAINGALIGKLLSFTNQTKDAS------------TEAYSEIMTTVLVDHRVEPSEKAFIREYRKKHGITEAVHSETLAKLGWTTEEFEDGSKHDKAFN 395
            H        S+  TD+  LR +A+ A  C + +N    H  PL +P  W L+F+  NG  I+ LL E +   + S ++L +FE+ F P  L+   F KL+++A   +V  G  L  EG    +++L+  GK    +            G K  E    + +G +IGE  I+       A  A AT    + T  + W    L  LL  +  ++R+V  AI+  ++ KL S     KD S             + Y+ ++  VL    +   E+  +  YR  H I +  H + L +LGWT E + DGS   K  N
Sbjct:   62 HLSFVLLAASYGFTDILDLRLMAVAAGVCTLAFNYWHPHGIPLWMPFRWNLLFIITNGIQIVHLLTEARRARSMSSQQLAVFEQVFQPAGLSLVDFWKLVSVANVIQVSEGAHLCYEGAFNPNVLLVVDGKAEVVIR-----------GTKVYE----LHAGQFIGEMGIHVGLRLSNAMKASATVTALTETTCMSWPRGVLIDLLESNDAIARAVQSAISADIVRKLTS-----KDDSEILVGKSLHWKCEKQYAMLLERVLEKQFITAHERNMLNRYRILHDIDQGTHVDVLKRLGWTAEGYADGSGDRKPDN 356          
BLAST of NO21G00070 vs. NCBI_GenBank
Match: XP_002292640.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED89836.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 107.8 bits (268), Expect = 8.500e-20
Identity = 84/317 (26.50%), Postives = 154/317 (48.58%), Query Frame = 0
Query:   92 GHALLHFGNACALLSFSMTDVFLLRSLAMVATTCGVIYNITHSP-PLRVPAIWGLVFLTVNGTMILSLLMEDKE-IAFSKEELVLFEEHFLPYSLTPTQFRKLIAI--AQWKEVPAGTTLAEEGERLTHLILISKGKVAAFVNQVPIQSFSTFPGAKDMETNKGIDSGAWIGEINFLDEEKKAKGAIATFVTESPTRFVC-WEHARLKGLLLDDAKLSRSVTHAINGALIGKLLSFTNQTKDASTEAYS-------EIMTTVLVDHRVE--------PSEKAFIREYRKKHGITEAVHSETLAKLGWTTEEFEDGSK 389
            G+ +++ G   +L  F M+DV  LR L++  + CG+ YN+T  P P     +WGLVF++VN   +  L ME  E + F+ +E+ L+  HF  + + P QF+KL+ +   ++ +   G  + ++G+ L  ++++ KG+V A   + P  S   +    D       ++G  IG    +D   + +      V       VC W   +L  ++  D  +  ++ HA+   LI + L    +TK  S + +S       +++T  + + RV+        P  K  IRE+  ++ IT       L +LGW+ ++++DG K
Sbjct:  155 GNLVMNAGAVLSLSGFMMSDVMNLRLLSICGSACGITYNLTRKPHPQYNAVLWGLVFVSVNVYHLYYLYMERTENLTFNGDEMALYTCHFQEWGVEPWQFKKLVKLDGCRFCKFSKGDLVVKDGKPLNDVLMVVKGEVGA---EDPKHSSLMYSYRGDG------NNGCVIGGTALVDPTIRGRSYPNRLVALQNDTVVCKWNTDKLSLIMQSDKDIESAMLHALYVELI-QGLRRDRETKKESIQQFSNSLLELEQMVTKAIKEARVDRDGTQVLKPDSKKRIREFSMENHITYNQKENILRRLGWSMDDWDDGGK 461          
BLAST of NO21G00070 vs. NCBI_GenBank
Match: PFH34537.1 (hypothetical protein BESB_065700 [Besnoitia besnoiti])

HSP 1 Score: 107.8 bits (268), Expect = 8.500e-20
Identity = 52/139 (37.41%), Postives = 83/139 (59.71%), Query Frame = 0
Query:   90 KGGHALLHFGNACALLSFSMTDVFLLRSLAMVATTCGVIYNITHSPPLRVPAIWGLVFLTVNGTMILSLLMEDKEIAFSKEELVLFEEHFLPYSLTPTQFRKLIAIAQWKEVPAGTTLAEEGERLTHLILISKGKVAAF 229
            + G+ L+  G+  +L    M D+ LLR   ++A  C   YN +  PP+R  A W +VF ++N  M+   L E  E+ F+ EEL +FE++FLP  L+P +FR L+ I QW+ +PAGT +   G+ +T L+ + +G+V  F
Sbjct: 1219 QNGNVLITTGSVLSLTGTVMADMRLLRGFNLLAGVCFFSYNCSRRPPVRDAATWNIVFFSLNFFMLYRYLTEHNEVGFTNEELDVFEKYFLPAGLSPRRFRTLLTIGQWETLPAGTEITRPGDPVTTLVFVVRGRVDVF 1357          
BLAST of NO21G00070 vs. NCBI_GenBank
Match: XP_002290947.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91054.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 105.5 bits (262), Expect = 4.200e-19
Identity = 74/284 (26.06%), Postives = 127/284 (44.72%), Query Frame = 0
Query:   95 LLHFGNACALLSFSMTDVFLLRSLAMVATTCGVIYNITHSPPLRVPAI-WGLVFLTVNGTMILSLLMEDK-EIAFSKEELVLFEEHFLPYSLTPTQFRKLIAIAQWKEVPAGTTLAEEGERLTHLILISKGKVAAFVNQVPIQSFSTFPGAKDMETNKGIDSGAWIGEINFL--------------------------------------DEEKKAKG----------------AIATFVTESPTRFVCWEHARLKGLLLDDAKLSRSVTHAINGALIGKLLSF 323
            +L+FG+   L+ F+  DV  LR+L+M  +T  VIY++   PP+R P+I W  +F  VNG  IL +L E K ++  S  E  ++ EHF P+ +TP QF K + +   + +  G  ++ +G  ++ + L+ +G   A V    + +  +  G  + +   G DSGAW+GE+ FL                                      DE  K+                  AI+T V       + W    ++ L+     +  S+T A+  A++GK+++F
Sbjct:  121 ILNFGSLATLVGFTRRDVLELRALSMTGSTTFVIYSLLQPPPIRWPSIVWSTLFAGVNGYKILGILNERKGKVVLSPREEEIYHEHFQPHGVTPKQFEKAMRVGTIRTIKKGELVSRQGIPISSVKLVIRGNTRASVMGRHLTAIGSARG--NRQKFAGGDSGAWVGEMAFLQSMWDKDHAPKNVASGAAGATAAGVQNKPSKPNTTTATDEGSKSNAVIRSGLSPSDGPNKYYAISTIVATEDIEVIEWSFEDMEKLMKSSVDMQGSMTRAMTAAIVGKVVNF 402          
BLAST of NO21G00070 vs. NCBI_GenBank
Match: OUT80086.1 (hypothetical protein CBB83_02765 [Rhodospirillaceae bacterium TMED23])

HSP 1 Score: 104.8 bits (260), Expect = 7.200e-19
Identity = 72/225 (32.00%), Postives = 115/225 (51.11%), Query Frame = 0
Query:   97 HFGNACALLSFSMTDVFLLRSLAMVATTCGVIYN-ITHSPPLRVPAIWGLVFLTVNGTMILSLLMEDKEIAFSKEELVLFEEHFLPYSLTPTQFRKLIAIAQWKEVPAGTTLAEEGERLTHLILISKGKVAAFVNQVPIQSFSTFPGAKDMETNKGIDSGAWIGEINFLDEEKKAKGAIATFVTESPTRFVCWEHARLKGLLLDDAKLSRSVTHAINGALIGKLL 321
            H   A A LSF + D+ LLRSLA+ +   GV +N +    P+ +P +W  +F+ +NG  I+ + +E + I+F+ EEL L+E  F   + T  +F KL+ IA+W+ V  G   AE+G+ LT L L+  G+V            S     K +   +    G+ IGE++F+    K   A AT + +   R V W   +LK LL  +  +  ++ H  +  L  KL+
Sbjct:   11 HVSFALAALSFFVRDMILLRSLAIASGVVGVFFNYLVSFGPMWIPIMWLSIFICINGYRIIGIFLERRSISFTDEELELYETIF--QNFTSLEFMKLMRIAEWRSVDIGYKFAEQGDDLTGLSLLFNGEV------------SIERDGKHLGIGR---DGSMIGEMSFI----KGGSANATVLAKCKCRCVYWPKEKLKALLNRNPSMDVAMKHVFSLDLTRKLV 214          
BLAST of NO21G00070 vs. NCBI_GenBank
Match: PHJ21195.1 (cyclic nucleotide-binding domain [Cystoisospora suis])

HSP 1 Score: 104.0 bits (258), Expect = 1.200e-18
Identity = 51/136 (37.50%), Postives = 83/136 (61.03%), Query Frame = 0
Query:   90 KGGHALLHFGNACALLSFSMTDVFLLRSLAMVATTCGVIYNITHSPPLRVPAIWGLVFLTVNGTMILSLLMEDKEIAFSKEELVLFEEHFLPYSLTPTQFRKLIAIAQWKEVPAGTTLAEEGERLTHLILISKGKV 226
            + G+ L+  G+  +L    M+D+ LLRS  ++A  C   YN T SP     A W +VFL +N  M+   L E  E+AF+ EEL +FE++FLP  L+P +FR L+A+ QW  +P G+ + + G+ +  L+ +++G+V
Sbjct: 1289 QNGNILITVGSVLSLTGTMMSDMRLLRSFNLLAGVCFFSYNYTRSPRSTDAAAWNVVFLCLNSFMLYRYLTEHNEVAFTNEELDVFEKYFLPAGLSPRRFRTLLALGQWHLLPPGSEITQAGKPVRQLVFVTRGRV 1424          

HSP 2 Score: 62.8 bits (151), Expect = 3.100e-6
Identity = 33/95 (34.74%), Postives = 55/95 (57.89%), Query Frame = 0
Query:  294 KGLLLDDAKLSRSVTHAINGALIGKLLSFTNQTKDASTEAYSEIMTTVLVDHRVEPSEKAFIREYRKKHGITEAVHSETLAKLGWTTEEFEDGSK 389
            K +L D  K+   V   +   L+ +  SF  Q++  + ++Y  ++  VL D  V+  E+ F+RE+R + GI+EA H E L +LGW+ EEF+ G +
Sbjct: 1812 KAVLNDPVKVGFPVLQGLASVLVER--SFA-QSQRLAVQSYDSVLAGVLADGTVQDEERRFLREWRARRGISEAQHIEALHRLGWSEEEFQRGER 1903          
The following BLAST results are available for this feature:
BLAST of NO21G00070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855612.16.300e-13270.69cyclic nucleotide-binding domain protein, partial ... [more]
EWM20664.12.300e-10273.83Cyclic nucleotide-binding domain protein [Nannochl... [more]
GAQ87613.14.000e-3832.19hypothetical protein KFL_003650040 [Klebsormidium ... [more]
GBG30116.19.700e-2427.48Blood vessel epicardial substance [Aurantiochytriu... [more]
CEP01676.13.800e-2028.25hypothetical protein PBRA_008618 [Plasmodiophora b... [more]
XP_002292640.18.500e-2026.50predicted protein, partial [Thalassiosira pseudona... [more]
PFH34537.18.500e-2037.41hypothetical protein BESB_065700 [Besnoitia besnoi... [more]
XP_002290947.14.200e-1926.06predicted protein [Thalassiosira pseudonana CCMP13... [more]
OUT80086.17.200e-1932.00hypothetical protein CBB83_02765 [Rhodospirillacea... [more]
PHJ21195.11.200e-1837.50cyclic nucleotide-binding domain [Cystoisospora su... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL030nonsL030Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR093ncniR093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR100ngnoR100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007569NSK007569Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO21G00070.1NO21G00070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|403888gene_11036Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100172g7gene9744Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO21G00070.1NO21G00070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO21G00070 ID=NO21G00070|Name=NO21G00070|organism=Nannochloropsis oceanica|type=gene|length=3193bp
ACAGGTATAATATTTGTCCAGATGAGGAGAGGCGCGACCATCGGCTGCGG
GCTCCTGAGGGAGGGGTTAGCAGCAGGGAGAAGAGTAGCGGCCGCACCAC
CTTCATCTCGACGTGCGGCCGCCTCCCGGCCCCCCATTCCTACCAACAAC
ATGCCCCGCAGCCTTCGCAGCAGCAGCAGTAGCCACTGTGTAGGAAGAAG
ATTAAGCTCGTCGTTGTCACCCTCCCCTTCCTCGTCTTCTCCTCCGGTCA
CGCCTCCTCCTTCCCCAGCCATGAAATTTGGCCCCCCAAAAGGAGGGCAC
GCCTTGTTGCACTTTGGTAATGCTTGCGCTCTGCTGAGTTTTTCCATGAC
AGACGTATTTCTCCTTCGCTCCCTGGCCATGGTGGCCACAACCTGTGGTG
gtgagggctctttacaggggggagggagggagggagggtagaaaggaaga
agagtggactgcttggtcgagtgcgatgtttcttcctctagtgatggtcc
tggtagtcataaataggcaagatgggtgcttatgtaaaactaggataaat
gcacaattcgccatggcactgtgtcaagtttgaatcataccgtccctcat
tctctgtctctccctccctaactccctccaagTAATATACAACATCACGC
ACTCTCCGCCCCTCCGCGTCCCAGCCATCTGGGGCCTTGTATTTCTCACA
GTCAATGGGACCATGATTCTCTCGTTGTTGATGGAAGACAAGGAGATTGC
GTTCTCAAAGgtagtgggagggagggggggagagagggtaggaggatggg
tgcgtgggagcgagtgtatgtactaattcggtcttagcttcaattgtgag
ttaataaggaatgaatttgcgttgggaagctattactccatttttcgctc
caccggtcctctctcgtcccttcctccttcctctcctctctcgctgcttc
ttagGAGGAGCTCGTCCTCTTCGAAGAGCACTTTTTGCCCTACTCCCTCA
CGCCAACCCAATTCCGGAAACTTATCGCCATCGCTCAGTGGAAGGAGGTG
CCAGCAGGgtaagaagagaggaagagagggatggaggagggagggatgga
gggagagagggttgaaggaaacttatcgccatcgcttagtagaaggtgcc
agcagggtaagaagagagagggttggaggaagggaaagtgcgagaacttc
ctctagcggactcgctgatttctcacaatcgtccttccctccctccctcc
ctttctccctcccacccaccagCACGACGCTCGCCGAGGAAGGAGAGCGT
CTGACCCACCTTATCCTTATCTCCAAAGGCAAGGTCGCTGCATTCGTAAA
CCAGgtacaaaaggagggagggagagggagaacggtggctagtagtcagc
tgacaagcaaaacattcattgcaatctcatccctccctgcctccctccct
tcctcttgcccttgcagGTGCCCATTCAGTCCTTTTCCACATTCCCTGGG
GCGAAAGACATGGAAACCAACAAGGGCATTGACAGCGgtgagaagggagg
gagggagggagggagggatgacatacacacacacatatatatatatgtat
cgtgattcgagctcatccctctacttttccttcctatcaaactcgcacca
gGCGCCTGGATCGGCGAGATCAACTTCCTGGACGAAGAGAAGAAGgtaat
ctgacgaccctccagtccctttcgacctcagtccctccttctttcaccat
caccttccatccctccctctccccttccctccttgcagGCCAAGGGCGCC
ATCGCCACCTTTGTGACAGAGAGTCCTACTCGCTTCGTTTGCTGGGAGCA
CGCCCGACTAAAAGGGCTCTTGTTAGATgtacggagggagggagggaggg
agggagggaggatgagggagagaaagaataacggagtttagggtggaaag
acaggggcagcgttcgtatcaattgaggatacaagcacacacaaaaggtt
gatccaatctcaggaaggcagattccgggaagaccattgatcctgtcatt
ctaatcccctgtccctccctccctcccttcctccctccctccctacctac
ctacctcgtctctcccttcagGACGCCAAGCTCTCACGCAGCGTGACGCA
TGCCATCAATGGGGCTTTGATTGGCAAGCTTTTGTCCTTCACGAACCAGA
CCAAGGACGCTAGTACTGAAGCGTATTCTGAAATCATGACGACGgtaggc
agggagggatgaacggacgggagtggtggtgtgacaagtggatttttgca
agacggggagacgaatcctggccatccgcacttttcctcgtggttcgcgg
attttctgacttctattgtgtcctggtccttttcctcggtatctccctct
ctttccttcctagGTGCTGGTGGACCACCGCGTGGAGCCGTCGGAGAAGG
CCTTCATCCGGGAGTACCGGAAGAAGCATGGCATCACAGAGGCGGTCCAC
AGgtagggaggtagggagggaggagagacctgagctgaaaaacaccttct
actctccgagcgctgttgctagagtgagagacttttcatgccatagtcat
ttttggagggggtcacccctcactcacccccttcctcccttccctttgcc
ctctccctcccttccttagCGAGACGCTGGCTAAGTTGGGCTGGACGACC
GAAGAGTTTGAGGACGGGAGCAAGCACGACAAGGCTTTCAATCAAGAGAC
GGTGGGTGCCCTCAGGAGAATCAATGAGGGCCTGATCCGACGGCAGACAA
TCATGGCTCAAGACGAAGACGAGGAACAGGCGCTGGGGAAGGTGGAGGAG
CTAGCGGATCGCTCAGCAGGTAAAGAATGATAAAAATGACAAAAGATCAG
AGGACGGAGAAGAAATGGGGATTTACTTGTGTGGGGAACGGCGTATGCAA
AATGCGACATCGGTAGGAGAGGTGTACATAAATGTACAAAATTTCACAGT
GAAATTAATGGCACGACAAGCAGTACGTGGTATGCTTGATTGTTACCTTT
TTGGTTCTTTGCTGGGCCGTATGTTCGATTTCTTGTTTTATCGACTGATC
AGCCGGTATGTTAAAATTGCGCACAAACAAAGGAAAATAAAGAGTATGCA
CTACAAGGAACAAAAAGCACTCAGGATTGCAAGACGTAAATTT
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protein sequence of NO21G00070.1

>NO21G00070.1-protein ID=NO21G00070.1-protein|Name=NO21G00070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=440bp
MRRGATIGCGLLREGLAAGRRVAAAPPSSRRAAASRPPIPTNNMPRSLRS
SSSSHCVGRRLSSSLSPSPSSSSPPVTPPPSPAMKFGPPKGGHALLHFGN
ACALLSFSMTDVFLLRSLAMVATTCGVIYNITHSPPLRVPAIWGLVFLTV
NGTMILSLLMEDKEIAFSKEELVLFEEHFLPYSLTPTQFRKLIAIAQWKE
VPAGTTLAEEGERLTHLILISKGKVAAFVNQVPIQSFSTFPGAKDMETNK
GIDSGAWIGEINFLDEEKKAKGAIATFVTESPTRFVCWEHARLKGLLLDD
AKLSRSVTHAINGALIGKLLSFTNQTKDASTEAYSEIMTTVLVDHRVEPS
EKAFIREYRKKHGITEAVHSETLAKLGWTTEEFEDGSKHDKAFNQETVGA
LRRINEGLIRRQTIMAQDEDEEQALGKVEELADRSAGKE*
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Synonyms
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