NO20G02540, NO20G02540 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G02540 vs. NCBI_GenBank
Match: XP_009035509.1 (hypothetical protein AURANDRAFT_58891 [Aureococcus anophagefferens] >EGB09441.1 hypothetical protein AURANDRAFT_58891 [Aureococcus anophagefferens]) HSP 1 Score: 384.0 bits (985), Expect = 5.400e-103 Identity = 203/389 (52.19%), Postives = 252/389 (64.78%), Query Frame = 0 Query: 2 IDFTDSPQFIPHTQKALNYTPHDVKWVPSSARLVSMGATAGAKGILEIYALSGGELKKTAEAEHKHSFKCSTFGASTLEERNLATGDWSGGLSVWDLDHLSSGPSLSLSTAHAGIINTIDGVGGLEGRGHGAPELVTGSKDGCVRVWDLRVSNPVLSLQPSPGDAKRDCWAVAFGDSHNDAERTLAAGYDNGDVKLFDLRTSTMRHEENVGNGVTSLEFDRRDTPMNKLVITTLESTFHVWDLRSSLGEGXXXXXXXXXXXXXXXXGTERGFVSIKQKMHQNATVWLARHLPQNRDIFATTGAEGGLALWQYHYPVKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNSRVLSSQPLVALDWHRNKAGLCAIASLDQCLRVHIITKL 391 ++ T++PQ I H ++LN+TP++ KWVP SAR V G + AKG+L+IY L GG+++ AE H KC TFGAS+L ER+LATGD+ GGL V+DL+ L + P+ S+ AH IIN IDGVGGL G G GAPELVTGS+DGCVRVWD RV PV+SL+P G RDCW AFG+S D ER +AAGYDNGDVKLFDLRT+ MR E N NGVT +EFDR+D MNKLV+TTLES F V+DLR+ + GF +K H+ ATVWLARHLPQNRD+F T G GG L+ YHYP KR++ LLNSRV+S+QP+V+ DW +K GL ++ LDQ LRV+I TKL Sbjct: 1 METTEAPQVIEHQHQSLNFTPYETKWVPCSARFVCCGISPKAKGVLQIYELKGGKMEVVAEKTHDCGLKCGTFGASSLGERSLATGDYKGGLHVFDLERLDA-PTFSVPGAHKAIINGIDGVGGL-GIGGGAPELVTGSRDGCVRVWDPRVREPVVSLEPVEGQPVRDCWCAAFGNSVGD-ERVVAAGYDNGDVKLFDLRTNAMRWETNASNGVTCVEFDRKDIEMNKLVVTTLESRFRVFDLRTQ--------------------HADDGFAHCTEKAHK-ATVWLARHLPQNRDVFMTGGGNGGFNLYAYHYPKKRTA------------THKDNAPVGVPGTVELLNSRVISTQPIVSFDWSPDKEGLAVLSCLDQTLRVYICTKL 353
BLAST of NO20G02540 vs. NCBI_GenBank
Match: XP_012199301.1 (WD repeat-containing protein 92 [Saprolegnia parasitica CBS 223.65] >KDO30122.1 WD repeat-containing protein 92 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 378.6 bits (971), Expect = 2.300e-101 Identity = 195/388 (50.26%), Postives = 253/388 (65.21%), Query Frame = 0 Query: 2 IDFTDSPQFIPHTQKALNYTPHDVKWVPSSARLVSMGATAGAKGILEIYALSGGELKKTAEAEHKHSFKCSTFGASTLEERNLATGDWSGGLSVWDLDHLSSGPSLSLSTAHAGIINTIDGVGGLEGRGHGAPELVTGSKDGCVRVWDLRVSNPVLSLQPSPGDAKRDCWAVAFGDSHNDAERTLAAGYDNGDVKLFDLRTSTMRHEENVGNGVTSLEFDRRDTPMNKLVITTLESTFHVWDLRSSLGEGXXXXXXXXXXXXXXXXGTERGFVSIKQKMHQNATVWLARHLPQNRDIFATTGAEGGLALWQYHYPVKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNSRVLSSQPLVALDWHRNKAGLCAIASLDQCLRVHIITK 390 +D TD+PQ I H K LNYTP+D +W+P SAR VSMG A G + IY L+ GELK AE E H KC TFGAS+LEER+LA GD++G +SV DL+ S P S + AH IIN I+G GGL G+GAPE+VTG +DGCVRVWD+RV+NPV+SL+P G+A RDCW VAFG+S+ND ER + AGYDNGDVK+FDLRT++MR E NV NGV ++FDR+D MNKL++TTLES F ++DLR+ +GF + +K H+ +TVW R LPQNRD+F T G GG L++YHYP R++ LLNSRVLS+QP+V++DW ++ GLC + LDQ +RV+I++K Sbjct: 1 MDTTDAPQVIEHVNKGLNYTPYDARWIPCSARFVSMGIHPRATGAITIYGLNQGELKTIAEIEKPHGIKCGTFGASSLEERHLACGDFAGVMSVLDLER-PSVPVYS-AQAHKSIINCIEGCGGL-NIGYGAPEIVTGGRDGCVRVWDIRVANPVVSLEPDQGEAVRDCWTVAFGNSYNDDERCIVAGYDNGDVKMFDLRTNSMRWETNVQNGVVGVQFDRKDIEMNKLLVTTLESKFRIYDLRT--------------------FHPTKGFSYMSEKAHK-STVWQGRFLPQNRDLFMTGGGNGGFNLYKYHYPSSRTT------------TDPDGILMGVGGTVELLNSRVLSTQPIVSMDWSPDREGLCVLTCLDQTVRVYIVSK 352
BLAST of NO20G02540 vs. NCBI_GenBank
Match: XP_008610610.1 (WD repeat-containing protein 92 [Saprolegnia diclina VS20] >EQC35848.1 WD repeat-containing protein 92 [Saprolegnia diclina VS20]) HSP 1 Score: 378.3 bits (970), Expect = 3.000e-101 Identity = 195/388 (50.26%), Postives = 252/388 (64.95%), Query Frame = 0 Query: 2 IDFTDSPQFIPHTQKALNYTPHDVKWVPSSARLVSMGATAGAKGILEIYALSGGELKKTAEAEHKHSFKCSTFGASTLEERNLATGDWSGGLSVWDLDHLSSGPSLSLSTAHAGIINTIDGVGGLEGRGHGAPELVTGSKDGCVRVWDLRVSNPVLSLQPSPGDAKRDCWAVAFGDSHNDAERTLAAGYDNGDVKLFDLRTSTMRHEENVGNGVTSLEFDRRDTPMNKLVITTLESTFHVWDLRSSLGEGXXXXXXXXXXXXXXXXGTERGFVSIKQKMHQNATVWLARHLPQNRDIFATTGAEGGLALWQYHYPVKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNSRVLSSQPLVALDWHRNKAGLCAIASLDQCLRVHIITK 390 +D TD+PQ I H K LNYTP+D +W+P SAR VSMG A G + IY L GELK AE E H KC TFGAS+LEER+LA GD++G +SV DL+ S P S + AH IIN I+G GGL G+GAPE+VTG +DGCVRVWD+RV+NPV+SL+P G+A RDCW VAFG+S+ND ER + AGYDNGDVK+FDLRT++MR E NV NGV ++FDR+D MNKL++TTLES F ++DLR+ +GF + +K H+ +TVW R LPQNRD+F T G GG L++YHYP R++ LLNSRVLS+QP+V++DW ++ GLC + LDQ +RV+I++K Sbjct: 1 MDTTDAPQVIEHVNKGLNYTPYDARWIPCSARFVSMGIHPRATGAITIYGLHQGELKTIAEIEKPHGIKCGTFGASSLEERHLACGDFAGVMSVLDLER-PSEPVYS-AQAHKSIINCIEGCGGL-NIGYGAPEIVTGGRDGCVRVWDIRVANPVVSLEPDEGEAVRDCWTVAFGNSYNDDERCIVAGYDNGDVKMFDLRTNSMRWETNVQNGVVGVQFDRKDIEMNKLLVTTLESKFRIYDLRT--------------------FHPTKGFSYMSEKAHK-STVWQGRFLPQNRDLFMTGGGNGGFNLYKYHYPSSRTT------------TDPDGILMGVGGTVELLNSRVLSTQPIVSMDWSPDREGLCVLTCLDQTVRVYIVSK 352
BLAST of NO20G02540 vs. NCBI_GenBank
Match: OQS04204.1 (WD domain-containing protein [Thraustotheca clavata]) HSP 1 Score: 378.3 bits (970), Expect = 3.000e-101 Identity = 193/388 (49.74%), Postives = 252/388 (64.95%), Query Frame = 0 Query: 2 IDFTDSPQFIPHTQKALNYTPHDVKWVPSSARLVSMGATAGAKGILEIYALSGGELKKTAEAEHKHSFKCSTFGASTLEERNLATGDWSGGLSVWDLDHLSSGPSLSLSTAHAGIINTIDGVGGLEGRGHGAPELVTGSKDGCVRVWDLRVSNPVLSLQPSPGDAKRDCWAVAFGDSHNDAERTLAAGYDNGDVKLFDLRTSTMRHEENVGNGVTSLEFDRRDTPMNKLVITTLESTFHVWDLRSSLGEGXXXXXXXXXXXXXXXXGTERGFVSIKQKMHQNATVWLARHLPQNRDIFATTGAEGGLALWQYHYPVKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNSRVLSSQPLVALDWHRNKAGLCAIASLDQCLRVHIITK 390 +D TD+PQ I H K LNYTP+D +W+P SAR VSMG A G + IY L+ GELK + E H KC TFGAS+LEER+LA GD++G ++V DL+ S P S + AH IIN IDG GGL G+GAPE+VTG +DGCVRVWD+RV+NPV+SL+P G+A RDCW VAFG+S+ND ER + AGYDNGDVK+FDLRT++MR E NV NGV ++FDR+D MNKL++TTLES F ++DLR+ +GF + +K H+ +TVW R LPQNRD+F T G GG L++YHYP R++ LLNSRVLS+QP+V++DW ++ GLC + LDQ +RV+I++K Sbjct: 1 MDTTDAPQVIEHVNKGLNYTPYDARWIPCSARFVSMGIHPRATGAITIYGLNSGELKTIVDIEKPHGIKCGTFGASSLEERHLACGDFAGVMNVLDLER-PSVPVYS-AQAHKSIINCIDGCGGL-NIGYGAPEIVTGGRDGCVRVWDIRVANPVVSLEPDQGEAVRDCWTVAFGNSYNDEERCIVAGYDNGDVKMFDLRTNSMRWETNVQNGVVGVQFDRKDIEMNKLLVTTLESKFRMYDLRT--------------------FHPTKGFAYMSEKAHK-STVWQGRFLPQNRDLFMTGGGNGGFNLYKYHYPTSRTA------------QDPDGILMGVGGTVELLNSRVLSTQPIVSMDWSPDREGLCVLTCLDQTVRVYIVSK 352
BLAST of NO20G02540 vs. NCBI_GenBank
Match: XP_009821171.1 (hypothetical protein H257_00273 [Aphanomyces astaci] >ETV88771.1 hypothetical protein H257_00273 [Aphanomyces astaci]) HSP 1 Score: 372.1 bits (954), Expect = 2.100e-99 Identity = 189/390 (48.46%), Postives = 252/390 (64.62%), Query Frame = 0 Query: 2 IDFTDSPQFIPHTQKALNYTPHDVKWVPSSARLVSMGATAGAKGILEIYALSGGELKKTAEAEHKHSFKCSTFGASTLEERNLATGDWSGGLSVWDLDHLSSGPSLSL--STAHAGIINTIDGVGGLEGRGHGAPELVTGSKDGCVRVWDLRVSNPVLSLQPSPGDAKRDCWAVAFGDSHNDAERTLAAGYDNGDVKLFDLRTSTMRHEENVGNGVTSLEFDRRDTPMNKLVITTLESTFHVWDLRSSLGEGXXXXXXXXXXXXXXXXGTERGFVSIKQKMHQNATVWLARHLPQNRDIFATTGAEGGLALWQYHYPVKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNSRVLSSQPLVALDWHRNKAGLCAIASLDQCLRVHIITK 390 +D TD+PQ I H K++NYTP+D +W+P SAR VSMG A G + ++AL GELK E E +H KC TFGAS+L+ R+LA GD++G +S++D + P + + + AH IIN IDG GGL G+GAPEL TG +DGCVRVWD RV+NPV+SL+P G+A RDCW VAFG+S ND ER LAAGYDNGDVKLFDLRT+TMR E NV NGV ++FDR+D MNKL++TTLES F ++D+R+ +G+ + +K H+ +TVW R LPQNRD+F T G GG L++YHYP R++ LLNSRVLS+QP+V++DW ++ GLC ++ LDQ +RV+I++K Sbjct: 1 MDTTDAPQVIEHITKSVNYTPYDARWIPCSARFVSMGIHPRATGAINVFALQQGELKVVHELEKQHGVKCGTFGASSLDARHLAVGDYAGIMSIYDFEK----PEIPVYSAQAHKSIINCIDGCGGL-NIGYGAPELATGGRDGCVRVWDTRVANPVVSLEPDQGEAVRDCWTVAFGNSFNDDERCLAAGYDNGDVKLFDLRTNTMRWETNVQNGVVGVQFDRKDIEMNKLLVTTLESKFRMYDMRT--------------------FHPAKGYAFMSEKAHK-STVWQGRFLPQNRDLFMTGGGNGGFNLYKYHYPSSRTT------------PDADGIHMGVGGTVELLNSRVLSTQPIVSMDWSPDREGLCVLSCLDQTVRVYIVSK 352
BLAST of NO20G02540 vs. NCBI_GenBank
Match: XP_008904819.1 (hypothetical protein PPTG_11287 [Phytophthora parasitica INRA-310] >ETI47796.1 hypothetical protein F443_08074 [Phytophthora parasitica P1569] >ETL41134.1 hypothetical protein L916_07824 [Phytophthora parasitica] >ETM47522.1 hypothetical protein L914_07787 [Phytophthora parasitica] >ETN09673.1 hypothetical protein PPTG_11287 [Phytophthora parasitica INRA-310] >ETO76491.1 hypothetical protein F444_08115 [Phytophthora parasitica P1976] >ETP17570.1 hypothetical protein F441_08043 [Phytophthora parasitica CJ01A1] >ETP45601.1 hypothetical protein F442_08008 [Phytophthora parasitica P10297] >KUF74009.1 WD repeat-containing protein 92 [Phytophthora nicotianae]) HSP 1 Score: 370.5 bits (950), Expect = 6.200e-99 Identity = 184/388 (47.42%), Postives = 247/388 (63.66%), Query Frame = 0 Query: 2 IDFTDSPQFIPHTQKALNYTPHDVKWVPSSARLVSMGATAGAKGILEIYALSGGELKKTAEAEHKHSFKCSTFGASTLEERNLATGDWSGGLSVWDLDHLSSGPSLSLSTAHAGIINTIDGVGGLEGRGHGAPELVTGSKDGCVRVWDLRVSNPVLSLQPSPGDAKRDCWAVAFGDSHNDAERTLAAGYDNGDVKLFDLRTSTMRHEENVGNGVTSLEFDRRDTPMNKLVITTLESTFHVWDLRSSLGEGXXXXXXXXXXXXXXXXGTERGFVSIKQKMHQNATVWLARHLPQNRDIFATTGAEGGLALWQYHYPVKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNSRVLSSQPLVALDWHRNKAGLCAIASLDQCLRVHIITK 390 +D TD+PQ I H ++N+TP+D KW+P SAR V+MG A G L I+ L+ GELK A E H KC TFGAS LE+R+LATGD+ G +SVWDL+ + + + AH I+N IDG GG + G GAPE+VTG +DGC+RVWD+RVS PV++L P D RDCW V FG+S+ND ER + GYDNGD+K+FDLRT+T+R E N NGV +++FDR+D MNKL++TTLES F V+DLR+ E+GF + +K H+ +T+W R LPQNRD+F T G GG L++YHYP+ R++ LLNSRVLS+QP+V++DW ++ GLC +A LDQ +RV+I+TK Sbjct: 1 MDTTDAPQLIEHVNHSVNFTPNDTKWIPGSARFVAMGIYPKATGALTIFGLNQGELKTHAVLEKTHGIKCGTFGASALEDRHLATGDYGGVMSVWDLE--KADVPVYSAQAHKSIVNAIDGCGG-QNIGSGAPEIVTGGRDGCIRVWDVRVSEPVVTLAPKEQDTARDCWTVCFGNSYNDVERCVVGGYDNGDIKMFDLRTNTLRWETNCQNGVVNVQFDRKDIEMNKLLVTTLESKFRVYDLRT--------------------FHPEQGFACMTEKAHK-STIWQGRFLPQNRDLFMTGGGNGGFNLYKYHYPLSRTA------------KDSDGRLYGVCGTVELLNSRVLSTQPIVSMDWSPDREGLCTLACLDQTVRVYIVTK 352
BLAST of NO20G02540 vs. NCBI_GenBank
Match: ETK87712.1 (hypothetical protein L915_07898 [Phytophthora parasitica] >ETL94291.1 hypothetical protein L917_07715 [Phytophthora parasitica]) HSP 1 Score: 370.5 bits (950), Expect = 6.200e-99 Identity = 184/388 (47.42%), Postives = 247/388 (63.66%), Query Frame = 0 Query: 2 IDFTDSPQFIPHTQKALNYTPHDVKWVPSSARLVSMGATAGAKGILEIYALSGGELKKTAEAEHKHSFKCSTFGASTLEERNLATGDWSGGLSVWDLDHLSSGPSLSLSTAHAGIINTIDGVGGLEGRGHGAPELVTGSKDGCVRVWDLRVSNPVLSLQPSPGDAKRDCWAVAFGDSHNDAERTLAAGYDNGDVKLFDLRTSTMRHEENVGNGVTSLEFDRRDTPMNKLVITTLESTFHVWDLRSSLGEGXXXXXXXXXXXXXXXXGTERGFVSIKQKMHQNATVWLARHLPQNRDIFATTGAEGGLALWQYHYPVKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNSRVLSSQPLVALDWHRNKAGLCAIASLDQCLRVHIITK 390 +D TD+PQ I H ++N+TP+D KW+P SAR V+MG A G L I+ L+ GELK A E H KC TFGAS LE+R+LATGD+ G +SVWDL+ + + + AH I+N IDG GG + G GAPE+VTG +DGC+RVWD+RVS PV++L P D RDCW V FG+S+ND ER + GYDNGD+K+FDLRT+T+R E N NGV +++FDR+D MNKL++TTLES F V+DLR+ E+GF + +K H+ +T+W R LPQNRD+F T G GG L++YHYP+ R++ LLNSRVLS+QP+V++DW ++ GLC +A LDQ +RV+I+TK Sbjct: 1 MDTTDAPQLIEHVNHSVNFTPNDTKWIPGSARFVAMGIYPKATGALTIFGLNQGELKTHAVLEKTHGIKCGTFGASALEDRHLATGDYGGVMSVWDLE--KADVPVYSAQAHKSIVNAIDGCGG-QNIGSGAPEIVTGGRDGCIRVWDVRVSEPVVTLAPKEQDTARDCWTVCFGNSYNDVERCVVGGYDNGDIKMFDLRTNTLRWETNCQNGVVNVQFDRKDIEMNKLLVTTLESKFRVYDLRT--------------------FHPEQGFTCMTEKAHK-STIWQGRFLPQNRDLFMTGGGNGGFNLYKYHYPLSRTA------------KDSDGRLYGVCGTVELLNSRVLSTQPIVSMDWSPDREGLCTLACLDQTVRVYIVTK 352
BLAST of NO20G02540 vs. NCBI_GenBank
Match: GAX98293.1 (WD domain-containing protein, putative [Pythium insidiosum]) HSP 1 Score: 370.5 bits (950), Expect = 6.200e-99 Identity = 184/389 (47.30%), Postives = 255/389 (65.55%), Query Frame = 0 Query: 2 IDFTDSPQFIPHTQKALNYTPHDVKWVPSSARLVSMGATAGAKGILEIYALSGGELKKTAEAEHKHSFKCSTFGASTLEERNLATGDWSGGLSVWDLDHLSSGPSLSLSTAHAGIINTIDGVGGLEGRGHGAPELVTGSKDGCVRVWDLRVSNPVLSLQPSPGD-AKRDCWAVAFGDSHNDAERTLAAGYDNGDVKLFDLRTSTMRHEENVGNGVTSLEFDRRDTPMNKLVITTLESTFHVWDLRSSLGEGXXXXXXXXXXXXXXXXGTERGFVSIKQKMHQNATVWLARHLPQNRDIFATTGAEGGLALWQYHYPVKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNSRVLSSQPLVALDWHRNKAGLCAIASLDQCLRVHIITK 390 +D T++PQ I H K++++TP+D KW+P SAR V+MG A G L ++AL GEL+ E E KH KC TFGAS LE+R+LATGD++G LSVWDL+ + ++ + AHA I+N IDG GG + GHGAPE+VTG +DGC+RVWD+RV +PV++L P GD + RDCW VAFG+++ND ER + G+DNGDVKLFDLRT+++R E N NGV ++FDR+D MNKL++TTLES F ++DLR+ E+GF + +K H+ +T+W R LPQNRD+ T G GG L++YHYP+ R++ LLNSRVLS+QP+V++DW ++ GLC +ASLDQ +RV+I++K Sbjct: 1 MDTTEAPQLIEHINKSVSFTPNDTKWIPCSARFVAMGIYPKATGALSVFALRQGELQTVVELEKKHGIKCGTFGASALEDRHLATGDFAGVLSVWDLERPDA--AVFEAQAHASIVNAIDGCGG-QQIGHGAPEIVTGGRDGCIRVWDVRVPDPVVTLAPPEGDGSARDCWTVAFGNAYNDDERCVVGGFDNGDVKLFDLRTNSLRWETNCQNGVVHVQFDRKDIEMNKLLVTTLESKFRIYDLRT--------------------FHAEKGFACLTEKAHK-STIWQGRFLPQNRDLXMTGGGNGGFXLYKYHYPLSRTT------------TDAEGRLMGVCGSVELLNSRVLSTQPIVSVDWSPDREGLCVLASLDQTVRVYIVSK 353
BLAST of NO20G02540 vs. NCBI_GenBank
Match: CBJ32445.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 369.8 bits (948), Expect = 1.100e-98 Identity = 188/389 (48.33%), Postives = 247/389 (63.50%), Query Frame = 0 Query: 2 IDFTDSPQFIPHTQKALNYTPHDVKWVPSSARLVSMGATAGAKGILEIYALSGGELKKTAEAEHKHSFKCSTFGASTLEERNLATGDWSGGLSVWDLDHLSSGPSLSLSTAHAGIINTIDGVGGLEGRGHGAPELVTGSKDGCVRVWDLRVSNPVLSLQPSPGDAKRDCWAVAFGDSHNDAERTLAAGYDNGDVKLFDLRTSTMRHEENVGNGVTSLEFDRRDTPMNKLVITTLESTFHVWDLRSSLGEGXXXXXXXXXXXXXXXXGTERGFVSIKQKMHQNATVWLARHLPQNRDIFATTGAEGGLALWQYHYPVKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNSRVLSSQPLVALDWHRNKAGLCAIASLDQCLRVHIITKL 391 +D TD+PQ + H K++ +TP+D +WVP SAR V G AKG L +Y L+ G+LK E E KC TFGAS+LE+R+LA GD++G L+++DL+ + + ++AH IIN +DG+GG E +GAPELVTG +DGCVRVWD R+S PV+ L+P G+ RDCW VAFG+++ D +R L AGYDNGDVKLFDLRT TMR E NV NGVT L+FDR D MNKLV+TTLES F +D+R+ E GF + +K H+ +TVWLARHLPQNRD+F T G GG L++YHYP R+ LLNSRV+SSQP+V+ DW ++ GLC ++ LDQ +RV+I+TKL Sbjct: 1 MDTTDAPQMMEHIHKSITFTPNDTRWVPCSARFVVTGIHPRAKGALVVYELNKGKLKLVHERETDAGIKCCTFGASSLEDRHLACGDYNGKLAIYDLER--NDVAAWSASAHKSIINAVDGLGGPEST-YGAPELVTGGRDGCVRVWDPRISEPVVKLEPREGETARDCWTVAFGNAYTDEDRCLTAGYDNGDVKLFDLRTQTMRWETNVKNGVTGLDFDRNDIEMNKLVVTTLESKFRTYDMRTQ--------------------HPEAGFAHLSEKAHK-STVWLARHLPQNRDLFMTGGGNGGFNLYKYHYPSSRTK------------NDKENIPMGVVGKVELLNSRVISSQPIVSFDWSPDREGLCCLSCLDQTVRVYIVTKL 353
BLAST of NO20G02540 vs. NCBI_GenBank
Match: XP_008862864.1 (hypothetical protein H310_01519 [Aphanomyces invadans] >ETW09059.1 hypothetical protein H310_01519 [Aphanomyces invadans]) HSP 1 Score: 369.0 bits (946), Expect = 1.800e-98 Identity = 188/388 (48.45%), Postives = 250/388 (64.43%), Query Frame = 0 Query: 2 IDFTDSPQFIPHTQKALNYTPHDVKWVPSSARLVSMGATAGAKGILEIYALSGGELKKTAEAEHKHSFKCSTFGASTLEERNLATGDWSGGLSVWDLDHLSSGPSLSLSTAHAGIINTIDGVGGLEGRGHGAPELVTGSKDGCVRVWDLRVSNPVLSLQPSPGDAKRDCWAVAFGDSHNDAERTLAAGYDNGDVKLFDLRTSTMRHEENVGNGVTSLEFDRRDTPMNKLVITTLESTFHVWDLRSSLGEGXXXXXXXXXXXXXXXXGTERGFVSIKQKMHQNATVWLARHLPQNRDIFATTGAEGGLALWQYHYPVKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNSRVLSSQPLVALDWHRNKAGLCAIASLDQCLRVHIITK 390 +D TD+PQ I H K++NYTP+D +W+P SAR VSMG A G + ++AL GELK E E +H KC TFGAS+L+ RNLA GD++G +S++D + P S + AH IIN IDG GGL G+GAPEL TG +DGCVRVWD RV+NPV+SL+P G+A RDCW VAFG+S ND ER +AAGYDNGDVKLFDLRT++MR E NV NGV ++FDR+D MNKL++TTLES F ++D+R+ +G+ + +K H+ +TVW R +PQNRD+F T G GG L++YHYP R + LLNSRVLS+QP+V++DW ++ GLC ++ LDQ +RV+I++K Sbjct: 1 MDTTDAPQVIEHITKSVNYTPYDARWIPCSARFVSMGIHPRATGAINVFALQQGELKVVHELEKQHGVKCGTFGASSLDARNLAVGDYAGVMSIYDFEK-PEVPVYS-AQAHKSIINCIDGCGGL-NIGYGAPELATGGRDGCVRVWDTRVANPVVSLEPDQGEAVRDCWTVAFGNSFNDDERCIAAGYDNGDVKLFDLRTNSMRWETNVQNGVVGVQFDRKDIEMNKLLVTTLESKFRMYDMRT--------------------FHPSKGYAFMSEKAHK-STVWQGRFMPQNRDLFMTGGGNGGFNLYKYHYPSSRVT------------QDADGIQMGVGGTVELLNSRVLSTQPIVSMDWSPDREGLCVMSCLDQTVRVYIVSK 352 The following BLAST results are available for this feature:
BLAST of NO20G02540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G02540 ID=NO20G02540|Name=NO20G02540|organism=Nannochloropsis oceanica|type=gene|length=3341bpback to top protein sequence of NO20G02540.1 >NO20G02540.1-protein ID=NO20G02540.1-protein|Name=NO20G02540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=391bpback to top Synonyms
Publications
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