NO20G02480, NO20G02480 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G02480 vs. NCBI_GenBank
Match: XP_004651671.1 (PREDICTED: tetratricopeptide repeat protein 37 [Jaculus jaculus]) HSP 1 Score: 89.0 bits (219), Expect = 1.300e-13 Identity = 70/186 (37.63%), Postives = 88/186 (47.31%), Query Frame = 0
Query: 570 AKACFLRAAKADPYHGPTFRELGLLFARGEEEQDRERALKCLAKAISLCPLDARAGEAFSRLCLQTARTEEAKRVWETVT--SSHVAAAWAWQWRALERLQAPTQEAGSDEMAVIYAQSALRARPMDKRAWACLGRAYARLGKTASAFRAFSRAHELKAD---VALELGRAQMEAGLIDEAVATLQ 751
A A FL+AA+ DPY G FR LG + + D+ RA C KA L DA +G A L ++ TE A + VT +S A WAW R L L +AG AV Q+ALRA P D W LG AY G +A ++FS+A EL D ++ Q G EAVA Q
Sbjct: 478 ALAHFLKAARLDPYMGKVFRYLGHYYR--DVVGDKNRARGCYRKAFELDDTDAESGAAAVDLSVELEDTETALAILTVVTQKASAGTAKWAWLRRGLHYL-----KAGQHSQAVADLQAALRADPKDCNCWESLGEAYLSRGSYTTALKSFSKASELNPDSIYSVFKVAAIQQTLGKYKEAVAQFQ 656
BLAST of NO20G02480 vs. NCBI_GenBank
Match: KXS10859.1 (TPR-like protein [Gonapodya prolifera JEL478]) HSP 1 Score: 85.9 bits (211), Expect = 1.100e-12 Identity = 127/449 (28.29%), Postives = 180/449 (40.09%), Query Frame = 0
Query: 570 AKACFLRAAKADPYHGPTFRELGLLFARGEEEQDRERALKCLAKAISLCPLDARAGEAFSRLCLQTARTEEAKRVWETVTSSHVAAAWAWQWRALERLQAPTQEAGSDEMAVIYAQSALRARPMDKRAWACLGRAYARLGKTASAFRAFSRAHELKAD---VALELGRAQMEAGLIDEAVATLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKELASACLALAYNCLADGFHARAAEALQKGIAALGCGLEXXXXXXXXXXGRWACWWKLKGD----LLTLAALLPEESGVREEEAAAAYGQAY------------ILARTEEEKG------KSKVDEGMAWLAL--------------GRKQRMKAG------EGSFPXXXXXXXXXXXXXXXXKACFIAALKEHDPCLADAWNGLGVCEAREGRVLVAQHCFVRALQLES 974
A+A F+RA K DP P + LG + E E D RA + KA+SL PLD AG CLQ +A V + T ++ AAWAW+ +A + E S ++ Q+A+R D W+ LG AY GK +A +AF+RA EL+ D +LG + +EAV L XXXXXXXXXXXXX + + LA+ L + +A G + RAAE + G + CW K+ GD L A + SG E A + A+ +LA E+K + ++ +A +L RK+ + AG F C A K H P WN LGV A + L +QH F+ A++L++
Sbjct: 532 ARAHFMRAVKLDPGFAPAYTALGQYLS--EHEGDASRAHRFYVKALSLDPLDEYAGSRVVEYCLQQGDAPQAVEVCKVATEANPRAAWAWKKKAFAEM-----ETKSYTSSIASFQAAIRLSVRDPPLWSGLGDAYLHEGKYTAATKAFTRASELEPDNVYPRYKLGLVKQRTRYYEEAVVELS-------AVAAELGAXXXXXXXXXXXXXALRVGMLQALAACQTELGRDLVAKGVYGRAAETFATALTTALQGHQAAEAL--------QCWAKVVGDSCLAFRGLPAYVQYVSGETLAEIARVFQDAHQATNGHSSAVGDLLAGLPEKKTDTDGPLRPSLEGIIACASLAYRHCVRLCVPPVGARKKHLLAGCLHDLAMSFFARWKAEPSIGVEYYEACVKCLTLATKYH-PTEVTVWNSLGVVTALKEPGL-SQHAFITAVELDN 956
BLAST of NO20G02480 vs. NCBI_GenBank
Match: GAN05044.1 (antiviral protein [Mucor ambiguus]) HSP 1 Score: 84.7 bits (208), Expect = 2.500e-12 Identity = 61/180 (33.89%), Postives = 86/180 (47.78%), Query Frame = 0
Query: 574 FLRAAKADPYHGPTFRELGLLFARGEEEQDRERALKCLAKAISLCPLDARAGEAFSRLCLQTARTEEAKRVWETVTSSHVAAAWAWQWRALERLQAPTQEAGSDEMAVIYAQSALRARPMDKRAWACLGRAYARLGKTASAFRAFSRAHEL---KADVALELGRAQMEAGLIDEAVATLQ 751
F++A K DPY F LG + E ++D RA KC KA L PLD A S + + EEA+ ++ ++ S WAW+ RL + S A+I Q ALR+ D R W L AY+R G+ +A +AF RA +L E Q + GL+D+A+A Q
Sbjct: 510 FMQAVKLDPYFASGFTYLGHYYR--EIKRDGIRAKKCYQKAYILNPLDTDAALCLSDFMIAENQQEEAETIFRQISESSPKTGWAWR-----RLGYVNMNSQSYNEAIICFQKALRSDTSDVRCWEGLAEAYSRAGRFVAALKAFGRATQLDPQSVHAHNEQSYVQQKVGLLDDAIAGFQ 682
BLAST of NO20G02480 vs. NCBI_GenBank
Match: XP_015215712.1 (PREDICTED: tetratricopeptide repeat protein 37 [Lepisosteus oculatus]) HSP 1 Score: 84.7 bits (208), Expect = 2.500e-12 Identity = 62/158 (39.24%), Postives = 77/158 (48.73%), Query Frame = 0
Query: 570 AKACFLRAAKADPYHGPTFRELGLLFARGEEEQDRERALKCLAKAISLCPLDARAGEAFSRLCLQTARTEEAKRVWETVTSSHVA--AAWAWQWRALERLQAPTQEAGSDEMAVIYAQSALRARPMDKRAWACLGRAYARLGKTASAFRAFSRAHELK 726
A C L+AAK D GP FR LG + + QDR RA C KA L DA AG A L ++ E A + ++VT A A WAW R L L + A+ Q+ALRA P+D W CLG AY +A RAFS+A EL+
Sbjct: 472 AHTCLLKAAKLDARLGPAFRCLGHFYR--DVAQDRARARGCYRKAFDLDGGDAEAGAAAVDLLMELGDMESALAILKSVTERAGAGVAKWAWLRRGLYSL-----KMNQHAQAIADLQAALRAEPLDAVCWECLGDAYLNRRSFTAALRAFSKAQELR 622
BLAST of NO20G02480 vs. NCBI_GenBank
Match: OAD05755.1 (hypothetical protein MUCCIDRAFT_106312 [Mucor circinelloides f. lusitanicus CBS 277.49]) HSP 1 Score: 84.7 bits (208), Expect = 2.500e-12 Identity = 61/180 (33.89%), Postives = 86/180 (47.78%), Query Frame = 0
Query: 574 FLRAAKADPYHGPTFRELGLLFARGEEEQDRERALKCLAKAISLCPLDARAGEAFSRLCLQTARTEEAKRVWETVTSSHVAAAWAWQWRALERLQAPTQEAGSDEMAVIYAQSALRARPMDKRAWACLGRAYARLGKTASAFRAFSRAHEL---KADVALELGRAQMEAGLIDEAVATLQ 751
F++A K DPY F LG + E ++D RA KC KA L PLD A S + + EEA+ ++ ++ S WAW+ RL + S A+I Q ALR+ D R W L AY+R G+ +A +AF RA +L E Q + GL+D+A+A Q
Sbjct: 510 FMQAVKLDPYFASGFTYLGHYYR--EIKKDGIRAKKCYQKAYILNPLDTDAALCLSDFMVAENQQEEAEAIFRQISESSPKTGWAWR-----RLGYANMNSESYNEAIICFQKALRSDTSDVRCWEGLAEAYSRAGRFVAALKAFGRATQLDPQSVHAHNEQSYVQQKVGLLDDAIAGFQ 682
BLAST of NO20G02480 vs. NCBI_GenBank
Match: OQR87349.1 (hypothetical protein ACHHYP_09083 [Achlya hypogyna]) HSP 1 Score: 84.7 bits (208), Expect = 2.500e-12 Identity = 110/414 (26.57%), Postives = 157/414 (37.92%), Query Frame = 0
Query: 572 ACFLRAAKADPYHGPTFRELGLLFARGEEEQDRERALKCLAKAISLCPLDARAGEAFSRLCLQTARTEEAKRVWETVTSSHVAAA---WAWQWRALERLQAPTQEAGSDEMAVIYAQSALRARPMDKRAWACLGRAYARLGKTASAFRAFSRAHELKAD----VALELGRAQMEAGLIDEAVATLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKELASACLALAYNCLADGFHARAAEALQKGIAALGCGLEXXXXXXXXXXGRWACWWKLKGDLLTLAALLPEESGVREEEAAAAYGQAY-ILARTEEEKGKSKVDEGMA-W---LALGRKQRMKAGEGSFPXXXXXXXXXXXXXXXXKACFIAALKEHDPCLADAWNGLGVCEAREGRVLVAQHCFVRALQLES 974
A L AAK +P+ F LG + E +D RA KC KA+SL P A AG+ S + E R+W VT+ A W AL RL + G DE A+ LR P + +WA LG YA G+ +A +++++A L D V EL R ++ GL DEA+ L+ ++K LA A G + RAA L + L WKL GD+ A L + + QAY +A+ E E ++ D G+ W +A G + + G+ + + F L DP A AWN G A +G V++ FVRA+QL +
Sbjct: 514 ASLLAAAKLNPHDAAAFAALGRWY--HEVGRDLVRAEKCFLKALSLDPACAVAGDLVSDMYATHGEHERNVRLWTDVTTPKEGVAPPLW-----ALRRLAQHQLDVG-DEAAIASLHKMLRQEPANAASWAALGHVYAAFGRVMAAQKSYAKAVSLGLDANPSVLCELARIELSVGLFDEALTHLR---------------------AAVAAVDAADVAVRKLLADTLFQHAKFLCGQGLYGRAAAHLHEASELLHACTAATSA---------PALWKLLGDVHCFAFYLAPGDFASWVDFISRGSQAYSTVAKLEPETPQAWYDVGVGLWYEAMACGSVEGVAMGQRALEHAPAFPSAVAALVQRAREAFGRCL-ALDPLDAMAWNAFG---AVQGHVVLKHFGFVRAIQLSN 885
BLAST of NO20G02480 vs. NCBI_GenBank
Match: XP_016093788.1 (PREDICTED: tetratricopeptide repeat protein 37 isoform X1 [Sinocyclocheilus grahami]) HSP 1 Score: 84.3 bits (207), Expect = 3.200e-12 Identity = 83/280 (29.64%), Postives = 112/280 (40.00%), Query Frame = 0
Query: 575 LRAAKADPYHGPTFRELGLLFARGEEEQDRERALKCLAKAISLCPLDARAGEAFSRLCLQTARTEEAKRVWETVT--SSHVAAAWAWQWRALERLQAPTQEAGSDEMAVIYAQSALRARPMDKRAWACLGRAYARLGKTASAFRAFSRAHELKADVALEL---GRAQMEAGLIDEAVATLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKELASACLALAYNCLADGFHARAAEALQKGIAALGCGLEXXXXXXXXXXGRWACWWKLKGDLLT 850
L+AAK DPY G FR LG + E +D+ RA C +A L DA AG A L ++ + A V ++VT ++ +A WAW R L L + G + A+ Q+ALRA P+D W CLG AY +A +AF +AH L+ L + G EA A + K L LALA N L D RA + +Q I L ++ +C WKL GD T
Sbjct: 497 LKAAKLDPYLGSVFRFLGHYYK--EVAKDQGRARGCYKRAFELDSSDAEAGAATVDLSMEQGDMDSALTVLQSVTERATPGSAKWAWMRRGLYHL-----KTGQHQQAIADLQAALRADPLDWVCWECLGEAYLNRRSFIAALKAFDKAHALQPTSIYSLYQTAAIKQILGRFKEAAAEYRQISEQEDYVPAL-----------------------KGLGECLLALARNALDDYLDGRAVDLIQNAIHYLFRAVKQRPDL--------SCLWKLLGDACT 738
BLAST of NO20G02480 vs. NCBI_GenBank
Match: XP_016093789.1 (PREDICTED: tetratricopeptide repeat protein 37 isoform X2 [Sinocyclocheilus grahami]) HSP 1 Score: 84.3 bits (207), Expect = 3.200e-12 Identity = 83/280 (29.64%), Postives = 112/280 (40.00%), Query Frame = 0
Query: 575 LRAAKADPYHGPTFRELGLLFARGEEEQDRERALKCLAKAISLCPLDARAGEAFSRLCLQTARTEEAKRVWETVT--SSHVAAAWAWQWRALERLQAPTQEAGSDEMAVIYAQSALRARPMDKRAWACLGRAYARLGKTASAFRAFSRAHELKADVALEL---GRAQMEAGLIDEAVATLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKELASACLALAYNCLADGFHARAAEALQKGIAALGCGLEXXXXXXXXXXGRWACWWKLKGDLLT 850
L+AAK DPY G FR LG + E +D+ RA C +A L DA AG A L ++ + A V ++VT ++ +A WAW R L L + G + A+ Q+ALRA P+D W CLG AY +A +AF +AH L+ L + G EA A + K L LALA N L D RA + +Q I L ++ +C WKL GD T
Sbjct: 497 LKAAKLDPYLGSVFRFLGHYYK--EVAKDQGRARGCYKRAFELDSSDAEAGAATVDLSMEQGDMDSALTVLQSVTERATPGSAKWAWMRRGLYHL-----KTGQHQQAIADLQAALRADPLDWVCWECLGEAYLNRRSFIAALKAFDKAHALQPTSIYSLYQTAAIKQILGRFKEAAAEYRQISEQEDYVPAL-----------------------KGLGECLLALARNALDDYLDGRAVDLIQNAIHYLFRAVKQRPDL--------SCLWKLLGDACT 738
BLAST of NO20G02480 vs. NCBI_GenBank
Match: XP_016093790.1 (PREDICTED: tetratricopeptide repeat protein 37 isoform X3 [Sinocyclocheilus grahami]) HSP 1 Score: 84.3 bits (207), Expect = 3.200e-12 Identity = 83/280 (29.64%), Postives = 112/280 (40.00%), Query Frame = 0
Query: 575 LRAAKADPYHGPTFRELGLLFARGEEEQDRERALKCLAKAISLCPLDARAGEAFSRLCLQTARTEEAKRVWETVT--SSHVAAAWAWQWRALERLQAPTQEAGSDEMAVIYAQSALRARPMDKRAWACLGRAYARLGKTASAFRAFSRAHELKADVALEL---GRAQMEAGLIDEAVATLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKELASACLALAYNCLADGFHARAAEALQKGIAALGCGLEXXXXXXXXXXGRWACWWKLKGDLLT 850
L+AAK DPY G FR LG + E +D+ RA C +A L DA AG A L ++ + A V ++VT ++ +A WAW R L L + G + A+ Q+ALRA P+D W CLG AY +A +AF +AH L+ L + G EA A + K L LALA N L D RA + +Q I L ++ +C WKL GD T
Sbjct: 491 LKAAKLDPYLGSVFRFLGHYYK--EVAKDQGRARGCYKRAFELDSSDAEAGAATVDLSMEQGDMDSALTVLQSVTERATPGSAKWAWMRRGLYHL-----KTGQHQQAIADLQAALRADPLDWVCWECLGEAYLNRRSFIAALKAFDKAHALQPTSIYSLYQTAAIKQILGRFKEAAAEYRQISEQEDYVPAL-----------------------KGLGECLLALARNALDDYLDGRAVDLIQNAIHYLFRAVKQRPDL--------SCLWKLLGDACT 732
BLAST of NO20G02480 vs. NCBI_GenBank
Match: XP_016093791.1 (PREDICTED: tetratricopeptide repeat protein 37 isoform X4 [Sinocyclocheilus grahami]) HSP 1 Score: 84.3 bits (207), Expect = 3.200e-12 Identity = 83/280 (29.64%), Postives = 112/280 (40.00%), Query Frame = 0
Query: 575 LRAAKADPYHGPTFRELGLLFARGEEEQDRERALKCLAKAISLCPLDARAGEAFSRLCLQTARTEEAKRVWETVT--SSHVAAAWAWQWRALERLQAPTQEAGSDEMAVIYAQSALRARPMDKRAWACLGRAYARLGKTASAFRAFSRAHELKADVALEL---GRAQMEAGLIDEAVATLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKELASACLALAYNCLADGFHARAAEALQKGIAALGCGLEXXXXXXXXXXGRWACWWKLKGDLLT 850
L+AAK DPY G FR LG + E +D+ RA C +A L DA AG A L ++ + A V ++VT ++ +A WAW R L L + G + A+ Q+ALRA P+D W CLG AY +A +AF +AH L+ L + G EA A + K L LALA N L D RA + +Q I L ++ +C WKL GD T
Sbjct: 497 LKAAKLDPYLGSVFRFLGHYYK--EVAKDQGRARGCYKRAFELDSSDAEAGAATVDLSMEQGDMDSALTVLQSVTERATPGSAKWAWMRRGLYHL-----KTGQHQQAIADLQAALRADPLDWVCWECLGEAYLNRRSFIAALKAFDKAHALQPTSIYSLYQTAAIKQILGRFKEAAAEYRQISEQEDYVPAL-----------------------KGLGECLLALARNALDDYLDGRAVDLIQNAIHYLFRAVKQRPDL--------SCLWKLLGDACT 738 The following BLAST results are available for this feature:
BLAST of NO20G02480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G02480 ID=NO20G02480|Name=NO20G02480|organism=Nannochloropsis oceanica|type=gene|length=9890bpback to top protein sequence of NO20G02480.3 >NO20G02480.3-protein ID=NO20G02480.3-protein|Name=NO20G02480.3|organism=Nannochloropsis oceanica|type=polypeptide|length=1270bpback to top protein sequence of NO20G02480.2 >NO20G02480.2-protein ID=NO20G02480.2-protein|Name=NO20G02480.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1408bpback to top protein sequence of NO20G02480.1 >NO20G02480.1-protein ID=NO20G02480.1-protein|Name=NO20G02480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1079bpback to top Synonyms
Publications
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