NO20G02480.1, NO20G02480.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO20G02480.1
Unique NameNO20G02480.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4236
Alignment locationchr20:758484..766552 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:758484..766552 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO20G02480.1 vs.
Match: XP_021079249.1 (tetratricopeptide repeat protein 37 isoform X2 [Mesocricetus auratus])

HSP 1 Score: 118.6 bits (296), Expect = 1.200e-22
Identity = 148/517 (28.63%), Postives = 210/517 (40.62%), Query Frame = 0
Query:  234 ERGREEEAKAC--FLRAAKADPYHGPTFRELGLLFARGEEEQDRERALKCLAKAISLCPLDARAGEAFSRLCLQTARTEEAKRVWETVT--SSHVAAAWAWQWRALERLQAPTQEAGSDEMAVIYAQSALRARPMDKRAWACLGRAYARLGKTASAFRAFSRAHELKAD---VALELGRAQMEAGLIDEAVATLQSTPSSSSSSSSSSSNSSSPPSLPPSPPPSADPLLKKELASACLALAYNCLADGFHARAAEALQKGIAALGCGLEGGREGGREGEGRWACWWKLKGDLLT-LAALLPEESGVR-------EEEAAAAYGQAYILARTEEEKGKS--KVDEGMAWLALGRKQRMKAGEGSFPPPPAAAAAGDESTRAAKACFIAALKEHDPCLADA----------WNGLGV--CEAREGRVLVAQHCFVRALQLES-HPGAWANLGMLYASVGREDLAREALRGLQ-LVQDHPMMWIGLALLLEERGELGTAREAYRAALEVGAHPEAQLGLA 720
            E  R++ AKA   FL+AA+ D Y G  F  LG  +   +   DR RA  C  KA  L   DA +G A   L ++   TE A  +   VT  +S  AA WAW  R L  L+A     G    AV   Q+ALRA P D   W  LG AY   G   +A ++F+RA EL  D      ++   Q   G   EA+   Q                   P+L             K L    L +A   L D    +A + ++K +      L        + +   +C WKL GD  T L A+ P +  VR       ++E + A  +  +L       G++   +     W  LG     +A           A  G  +    +      L++   CL  A          WN LGV  C    G   +AQHCF++++Q E  +  AW NLG+LY +    + A EA +  Q L   + + WIG AL+ E  G   T  + +R   E+  H E  +G A
Sbjct:  289 EETRKDRAKALTHFLKAARLDTYMGKVFCYLGHYYR--DVAGDRNRARGCYRKAFELDDTDAESGAAAVDLSVELEDTETALAILTAVTQKASAGAAKWAWLRRGLHHLKA-----GQHSQAVADLQAALRADPKDCNCWEALGEAYLSRGGYTTALKSFTRASELNPDSTYSVFKVAAIQQILGRYTEAITQYQLI---------IKKKEDYVPAL-------------KGLGECHLMMAKAALVDFLDGKAVDYVEKALEYFTWAL--------QRQADVSCLWKLAGDACTSLHAVSPSKVHVRVLGVLLGQQEGSEALKKDELLHLGGRCYGRALKLMSTSNTWCDLGINYYHQAQH--------LAETGSSTDGLTE-----LLEKSVHCLKKAVRLDSNNHLYWNALGVVACYRGIGNYSLAQHCFIKSIQAEQINAAAWTNLGVLYLATENIEQAHEAFKMAQSLDPSYLLCWIGQALIAETVGSYDT-MDLFRHTTELSMHTEGAIGYA 754          
The following BLAST results are available for this feature:
BLAST of NO20G02480.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
XP_021079249.11.200e-2228.63tetratricopeptide repeat protein 37 isoform X2 [Me... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G02480NO20G02480Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO20G02480.1NO20G02480.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO20G02480.1.cds1NO20G02480.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds2NO20G02480.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds3NO20G02480.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds4NO20G02480.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds5NO20G02480.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds6NO20G02480.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds7NO20G02480.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds8NO20G02480.1.cds8Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds9NO20G02480.1.cds9Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds10NO20G02480.1.cds10Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds11NO20G02480.1.cds11Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds12NO20G02480.1.cds12Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds13NO20G02480.1.cds13Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds14NO20G02480.1.cds14Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds15NO20G02480.1.cds15Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds16NO20G02480.1.cds16Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds17NO20G02480.1.cds17Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds18NO20G02480.1.cds18Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds19NO20G02480.1.cds19Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds20NO20G02480.1.cds20Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds21NO20G02480.1.cds21Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G02480.1.cds22NO20G02480.1.cds22Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO20G02480.1 ID=NO20G02480.1|Name=NO20G02480.1|organism=Nannochloropsis oceanica|type=mRNA|length=4236bp
CCTTCCTTCCCTCCCTTCCTCCCTTCCTCCCTCACCAGAGTCTCTCCCTC
TTGCGCCCCCGCCGCGGACGCCCGTATTCTCGCGTGGTGGTACTTTCCCG
GGGAGGAGGGGAAGGAGGGACGGAAGGGGGAAGGGAAGGAGGAAGGGAAG
GAGGAAGAGCAAGAAGAGGAGGAGGTCCTCCTTCTCGCCCGAGACTCCCT
GCGCCTTCGCCCCTCCTCCCCCCTCCCCCTCCTTCACCTCGCCTGGCGGC
TCATGTGTAACGGTCACGTCATCCCTCAAGCTCTGCAGCTCCTCACCCAT
GCCACTGAATCAGGGCCGCCCCTCTCCCTCGCCCTCTCCCTCCTCCTGGA
GCTCCACGCCATCCACACCCGCTTCTCCTTCACAGATCCCTCCTCCTTCC
TAGCACTGCTCGACCAGACCGACGCCACTATCAGGCGAGAAACACCCAAT
TGGGGCGTCCCGCAACGACGAGACCTCCTCGTCATCTCCCTCCGGGCCCG
CGCCGCCTTTGCCGAGTGGATGGGGAAGAAAAACGAGGCCACGGCATGTT
ATAAACAGCTGCTGGGAAAGGCAGAGGGAGCCTGCGGACTGGCGTCCCTC
CTCCTCCTGGAGCCCCAGCTGGACGAGGAAGACGGAGAAGGAGGAGTTGA
GGGAGGAGGAGGGGAGGGAGCAACAGCAGCAACGGCGGCAGCAGCAGAAG
AAGCGTTAACCCTCCTCTCCCCTTTCGTCCACCCTCCCTCTCCGTCCTCC
TCCTCTTCTTCTTCCTTCTCTCCGGAAGCTCAGGCTCTCTACGCCTTTGC
CCTGCTCAAGACCGGACGGGACACCGAACAGGCCGCTTCCCTCCTTTCAA
CGGCTGCGGCCGTTAAACCAGGCCTCGCGTATCTCCAAGGCATTAGCCTA
CTGGAGGAAGGAGGAGGAAGGGGAGGAGGAGGAGGACGGGAGGGAGGGAA
GGAGAGAGGGCGAGAGGAAGAGGCGAAGGCGTGCTTCCTCCGTGCTGCCA
AGGCTGACCCTTACCACGGACCGACCTTCCGAGAGCTCGGCCTCCTCTTC
GCAAGGGGCGAGGAAGAACAAGACAGGGAGCGCGCCCTCAAATGTTTGGC
CAAAGCGATCTCTCTCTGTCCCCTCGATGCCCGGGCAGGCGAAGCCTTCT
CCCGCCTTTGCCTCCAGACAGCACGTACCGAGGAAGCCAAGCGCGTCTGG
GAAACAGTCACAAGTTCCCACGTTGCTGCCGCCTGGGCATGGCAATGGAG
GGCGCTTGAGCGCCTACAAGCCCCCACCCAAGAGGCAGGGAGCGATGAGA
TGGCCGTAATTTATGCCCAATCCGCCCTCCGTGCCAGACCTATGGACAAG
AGGGCTTGGGCCTGCCTTGGCCGCGCCTACGCCCGCCTGGGGAAAACGGC
TTCGGCGTTCCGAGCCTTCAGTCGGGCGCATGAGCTCAAGGCTGATGTTG
CCCTCGAGCTGGGAAGAGCGCAGATGGAAGCCGGCCTCATTGACGAGGCA
GTTGCTACCCTCCAATCAACTCCATCCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAACAGCAGTAGCCCTCCCTCTCTCCCTCCATCCCCCCCTCCCT
CTGCCGATCCCCTCCTGAAGAAGGAGCTGGCCTCGGCCTGTCTGGCCCTG
GCGTACAATTGCCTCGCAGACGGCTTCCACGCTCGAGCCGCCGAGGCCCT
GCAAAAGGGGATCGCGGCCTTGGGGTGTGGGCTGGAGGGAGGGAGGGAGG
GCGGGAGGGAGGGCGAGGGGAGATGGGCCTGCTGGTGGAAGCTGAAGGGG
GATTTACTGACGCTCGCGGCCCTGCTGCCGGAGGAGAGTGGTGTGAGGGA
AGAGGAGGCGGCGGCGGCGTATGGTCAGGCGTACATTTTGGCCCGCACAG
AGGAGGAGAAGGGCAAGAGCAAGGTTGATGAGGGCATGGCCTGGCTGGCC
CTCGGGAGGAAACAGCGGATGAAGGCAGGAGAAGGTTCCTTCCCTCCTCC
TCCTGCTGCTGCTGCTGCTGGGGACGAATCTACTCGGGCAGCAAAGGCAT
GTTTTATCGCCGCCCTTAAAGAGCATGATCCTTGCCTGGCCGATGCCTGG
AATGGGCTGGGAGTGTGTGAGGCGAGGGAAGGGAGGGTTCTGGTGGCTCA
GCACTGCTTCGTCCGTGCCCTTCAGCTGGAGTCTCACCCGGGCGCATGGG
CCAACCTCGGCATGCTCTACGCGTCCGTTGGGAGGGAGGATTTGGCGCGA
GAGGCTTTAAGGGGCTTGCAGCTCGTGCAGGACCATCCAATGATGTGGAT
TGGTCTGGCTTTGCTGCTGGAGGAGCGCGGAGAGCTAGGCACCGCCCGAG
AAGCCTATCGGGCGGCGTTAGAGGTCGGTGCACATCCCGAGGCTCAGCTA
GGGCTCGCCTCCGTCTCTGGAAGGGATGGCGAGGGGGAGGGCGGGGGGGA
GGAAGGGCTGACGCAGGCCCTGATGGCCCATAACCAGCGGCCGGCGCATG
TGTATGGAGGCGTATTGCTCGCGCAAAAACTGCTGTGGGTGGCGAGGCAA
CCGGCGGCAGCGCTGCGTGTTCTCGACGCGCTGGAGGAGGTGGCTCTGGC
TAAGCATAAAAAGGCCGAGGCTGTGGTGCAGGCGACAAGGGCAAGAGCGA
GAGCAGCCCTGGGTCTCTCCCCTCTACTGCCTTCCTCCTCCTCCTCCTCC
CTCCTGCTGACCGCCCGCGCCGCGGCTGCCCGAGGGGAGTGGGGCGAGAT
GGCTGTGGCCTTACTGGCACTGGAAGGAGGAGGAGGAGGAAGAGGAGACG
GAGAGGAGGAGAAGGAGGTGGTATCTCGGTGTGTGGTGAAAACCCTCGGT
CTCCTGGCTCAGGGCGATGCAACGGGCGCCAAAGCCACCCTCTCCACCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCGCTGCAAGCAGCAGCTTC
AGGCCTTGAGAGCCATTTTGGGGGAAACAGAGAAGGAACAGGAGAAGGGC
GAGGAGGGAAAGAGAGAGAAAGGGATGAAGGAAAAGGAGGCATGCCTCCA
AGCCATCTGCAAGGAGGCGGAGTCCATGCAGGATCCAGAGGCCCCTCCCT
CCCTCGCAAGCTACCCGGAGGTTCTCCAGCTCTTCCCCTCTTCTCTCTCC
GTCCTCGCCCTCTGCGCATCACGGACTCACTCCTCCCTCCCTCCCTCCTC
CTCTGCCTTCTCCCTTCCCGCCTTGTTGGATGCCCTGTCTTCTGGTGGTA
GTATCTCGTCCTCCCCCCCTTCCACTTCCTCCCCCCCTCCCTCCTTCTCC
ACGGTGGAAGACCTGGCAGTGGCTGCGACTGTGCTCTGGCTTCGAGAAAC
CACAGGGCAGGTGGAGGGAGGGAGGGAGGGAGGGCGGGGTCGAAAGATGT
TGTTGAAGTTAATTCACCTCTATCCCCTGCTGGAACGACCGAGAGAATTT
CTGGAAGTGGGCCAGGCGGCATGGGGAGGGGGGGGGTAGGGCAGACACTG
TGGGGAAGGACGACGAGCAAAGGCTTGCCGTTGGGGTGGGAGGACGCGAT
AGGCCGTTGTCGACGAGCAGCAGCAGCAGGAGAGTGGGAAAAGGCCTCCG
GGGAGTATTGCGCAGTTTTGGGGAGGGTGAAGGAGGGGTGGGTGGACGGG
TGGAGAGAGTGGGCGGAGGTGGTGCTGAAGTGGAAGGGGGGAGTAGCAGC
GAAAAAAATCTGGCGTTTTGTTCTGAGGGAAATGGGATCCGTGCTGTCGC
CGGTGGGGAAGGCCGCGATCCACATCCGTCTAGCTTCTCTCTTGTACGAG
GAAGGCGGGGCGGAGGAAGGGATGGAGGAACTGGGCGAAGCAGCAAAAGC
AAACCCGGGCAAAGGCGACGCCGCTGCCTTTTGGTTGAGGGGCATGTTGT
GGAAGAGGGAGGGAGGGAGGGTGGGAGGGAGGGAGAAGCAGGTGGTGCAG
AGTTGGGGAAAAGCGCGCGAAGCGAGACCGACGTGTGGGCTCTTGAGAAG
GCTGGCCGGGGGGGAGGGAGGGAGGGAGGGAGGGGAGTAAGAAGGAAGGA
GGAGAGATCGAGGCAATGCACAGGCAGAGAGAGGAGGGAGGGGAGGGCAG
GAAAGGGAATGCGGTGCATGGATACACATGGCTGTATGTGGTCGTTGCAG
TGGAGATCGGACCATCAAATTAATCATCCTCTTACGCGTGTCCGGGCTGG
CGGGGAAAGATAGAAAAAACACATTATGGAAATCTA
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protein sequence of NO20G02480.1

>NO20G02480.1-protein ID=NO20G02480.1-protein|Name=NO20G02480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1079bp
MCNGHVIPQALQLLTHATESGPPLSLALSLLLELHAIHTRFSFTDPSSFL
ALLDQTDATIRRETPNWGVPQRRDLLVISLRARAAFAEWMGKKNEATACY
KQLLGKAEGACGLASLLLLEPQLDEEDGEGGVEGGGGEGATAATAAAAEE
ALTLLSPFVHPPSPSSSSSSSFSPEAQALYAFALLKTGRDTEQAASLLST
AAAVKPGLAYLQGISLLEEGGGRGGGGGREGGKERGREEEAKACFLRAAK
ADPYHGPTFRELGLLFARGEEEQDRERALKCLAKAISLCPLDARAGEAFS
RLCLQTARTEEAKRVWETVTSSHVAAAWAWQWRALERLQAPTQEAGSDEM
AVIYAQSALRARPMDKRAWACLGRAYARLGKTASAFRAFSRAHELKADVA
LELGRAQMEAGLIDEAVATLQSTPSSSSSSSSSSSNSSSPPSLPPSPPPS
ADPLLKKELASACLALAYNCLADGFHARAAEALQKGIAALGCGLEGGREG
GREGEGRWACWWKLKGDLLTLAALLPEESGVREEEAAAAYGQAYILARTE
EEKGKSKVDEGMAWLALGRKQRMKAGEGSFPPPPAAAAAGDESTRAAKAC
FIAALKEHDPCLADAWNGLGVCEAREGRVLVAQHCFVRALQLESHPGAWA
NLGMLYASVGREDLAREALRGLQLVQDHPMMWIGLALLLEERGELGTARE
AYRAALEVGAHPEAQLGLASVSGRDGEGEGGGEEGLTQALMAHNQRPAHV
YGGVLLAQKLLWVARQPAAALRVLDALEEVALAKHKKAEAVVQATRARAR
AALGLSPLLPSSSSSSLLLTARAAAARGEWGEMAVALLALEGGGGGRGDG
EEEKEVVSRCVVKTLGLLAQGDATGAKATLSTLPPSLPPSLPPRCKQQLQ
ALRAILGETEKEQEKGEEGKREKGMKEKEACLQAICKEAESMQDPEAPPS
LASYPEVLQLFPSSLSVLALCASRTHSSLPPSSSAFSLPALLDALSSGGS
ISSSPPSTSSPPPSFSTVEDLAVAATVLWLRETTGQVEGGREGGRGRKML
LKLIHLYPLLERPREFLEVGQAAWGGGG*
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mRNA from alignment at chr20:758484..766552-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO20G02480.1 ID=NO20G02480.1|Name=NO20G02480.1|organism=Nannochloropsis oceanica|type=mRNA|length=8069bp|location=Sequence derived from alignment at chr20:758484..766552- (Nannochloropsis oceanica)
CCTTCCTTCCCTCCCTTCCTCCCTTCCTCCCTCACCAGAGTCTCTCCCTC TTGCGCCCCCGCCGCGGACGCCCGTATTCTCGCGTGGTGGTACTTTCCCG GGGAGGAGGGGAAGGAGGGACGGAAGGGGGAAGGGAAGGAGGAAGGGAAG GAGGAAGAGCAAGAAGAGGAGGAGGTCCTCCTTCTCGCCCGAGACTCCCT GCGCCTTCGCCCCTCCTCCCCCCTCCCCCTCCTTCACCTCGCCTGGCGGC TCATGTGTAACGGTCACGTCATCCCTCAAGCTCTGCAGCTCCTCACCCAT GCCACTGAATCAGGGGTAAGCCCGGCCCTCCCTCCCTCCCTCCCTCCCTC TCTTGGCCGCGATTTATGCTTGCGCCATGCTCCCTCCCTCATCCCTCCCT CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCA GCCGCCCCTCTCCCTCGCCCTCTCCCTCCTCCTGGAGCTCCACGCCATCC ACACCCGCTTCTCCTTCACAGATCCCTCCTCCTTCCTAGCACTGCTCGAC CAGACCGACGCCACTATCAGGTACATCCTCCCTCCCACCCTCCCACCCTC CCTCCCTTCCCTCCTTCCTTCCTACACCTTTCGTTCTTCCTTTTTTCTTA CGCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC CCTCCCTCCCTCCGTCCGTCATGCCATCATTTCCCCCTATCTTTTCACTC CTCCCTCTCTCCCTCCCTCCCTCCCTCCCTCCCCAGGCGAGAAACACCCA ATTGGGGCGTCCCGCAACGACGAGACCTCCTCGTCATCTCCCTCCGGTGA ACCCCTCCCTCCCTCCCCCCTTCCCTCCCTCCCTCCCTTGATTGGAAGAA TGATTGACTGTTGGTGAACGTTTTCCTCTTCTTACCCTCCCTCCCTCCCT CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTTCCCCAGGGCCCGCGCC GCCTTTGCCGAGTGGATGGGGAAGAAAAACGAGGCCACGGCATGTTATAA ACAGCTGCTGGGAAAGGCAGAGGGAGCCTGCGGTACGGAGGGAGAGAGGA AGGGAGGGAGGAAGGGAGGGAGGGAGGGGCGTGAAGGAAGGAAGACGAAA AGGATGGAGGGCGAGAGGGCGGGCAGGAGGGCAGGAAGAGGAGACGAACA TTATAATACACATGTCTAGTCTCTAGTTTCTGATGACGTGCTGTTTCTCG TCCCTGTCGCAGGACTGGCGTCCCTCCTCCTCCTGGAGCCCCAGCTGGAC GAGGAAGACGGAGAAGGAGGAGTTGAGGGAGGAGGAGGGGAGGGAGCAAC AGCAGCAACGGCGGCAGCAGCAGAAGAAGCGTTAACCCTCCTCTCCCCTT TCGTCCACCCTCCCTCTCCGTCCTCCTCCTCTTCTTCTTCCTTCTCTCCG GAAGCTCAGGCTCTCTACGCCTTTGCCCTGCTCAAGACCGGACGGGACAC CGAACAGTAAGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC TCCCTCCCTCCCTCCCTCCCTCCCCTCCCTCCCTCCCTCCCTCCCCCCCC CCCTCTCTTCCCCCCTCCCTCCCTCCCTCTCTCCCTCCTTCCCTCCCTCT CTCCTTTTTGCTCCCTGTTCCTTCCAACTCTCCTTCGCCTTTCCTTCATA TCCCTTCCCTCCTGTCGTTTCCTCCCTCCACATCACCTGTAGGGCCGCTT CCCTCCTTTCAACGGCTGCGGCCGTTAAACCAGGCCTCGCGTATCTCCAA GGCATTAGCCTACTGGAGGAAGGAGGAGGAAGGGGAGGAGGAGGAGGACG GGAGGGAGGGAAGGAGAGAGGGCGAGAGGAAGAGGCGAAGGCGTGCTTCC TCCGTGCTGCCAAGGTTTGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG GGAGGGAGGGAGGGAGGGAGGGGGGGAGGGAGAGGCCCATGAAAAAAAAT CTCACCGCCCCTCTTTTTATCCCTTTCCCTTTTCGCCCTATTCTCTTTTT TCTCCTCTTCTTCCTCCTCTTCCTCTTCCTCCTCCTCCTCCTCCTCCTCC TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC CTCCTCGATAGGCTGACCCTTACCACGGACCGACCTTCCGAGAGCTCGGC CTCCTCTTCGCAAGGGGCGAGGAAGAACAAGACAGGTTCACCCCTCCCTC CCTCCCTCCCTCTCTCTCCCTCCCTACCTCCCCTCCCTCTTTGATGTTTC CCGGACGTCTCCGTCGGCAATCCCTCCATTTATCCTTCTCTACACTAAAC CTTCCCTCCCTCCCTCTCTCCCTCCCTTCCCAGGGAGCGCGCCCTCAAAT GTTTGGCCAAAGCGATCTCTCTCTGTCCCCTCGATGCCCGGGCAGGCGAA GCCTTCTCCCGCCTTTGCCTCCAGGTATCTCCTCCCCTCCTTCCGTCCCT CCCTCCCTCCCTTCCTCCTTCCTTCCCTCCTTCTGATCCCTTCTCCCTCC CTCCCCTTTTTAGACAGCACGTACCGAGGAAGCCAAGCGCGTCTGGGAAA CAGTCACAAGTTCCCACGTTGCTGCCGCCTGGGCATGGCAATGGAGGGCG CTTGAGGTAGCGAGGGAGGGAGGGAGGGAGGGGGGGAGGGCGGGGCGGAA GAAAGAGCAAATGGACCTCTGGAGACACTCACCTCCCTCCCTCCCTCCCT CCCTCCCTCCCTAAGCGCCTACAAGCCCCCACCCAAGAGGCAGGGAGCGA TGAGATGGCCGTAATTTATGCCCAATCCGCCCTCCGTGCCAGACCTATGG ACAAGAGGGCTTGGGCCTGCCTTGGCCGGTGCGTGCCCTCCCTCCCTCCC TCCCTCCTTCCCTTTCTCCCTTCCTCCTTCCTTCCTTCTTTGATATGCCT TCACTCACTTTCCCTCCCTCCCTCCTTCAATTGAAATTTGACACACGCTA TTCACTGTCCTTTATCCCCCTTCCCTCCCTCCCTCTCTCCCTCACCCCCT CCCTCCCTCCCCCTCAGCGCCTACGCCCGCCTGGGGAAAACGGCTTCGGC GTTCCGAGCCTTCAGTCGGGCGCATGAGCTCAAGGCTGATGTTGCCCTCG AGCTGGGAAGAGCGCAGGTAGGGGGGGGGGAGGGAAGGAGGGAGGGAAGG AGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGAGA ATACATTTGCGCTTTTAGGATCAATATTTTTTTGCCTGGGGTGCTCTCCA CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCAGATGGAAG CCGGCCTCATTGACGAGGCAGTTGCTACCCTCCAATCAACTCCATCCAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGTAGCCCTCCCTCTCT CCCTCCATCCCCCCCTCCCTCTGCCGATCCCCTCCTGAAGAAGGAGCTGG CCTCGGCCTGTCTGGCCCTGGCGTACAATTGCCTCGCAGACGGCTTCCAG TAAGGAGGGAGGGAGGGAGGGGGGGAGGAAGGGAGGGAGGGAGGGCGCCC AGTGCCGAGGGAGGGGAGGAAGAGAGGAAGGATGAGAGAGAGGGAGGGAG GGAAGACTGAATTCTGCATTGCCTTGGACATTCTGGTTACTCACCACCTC CGTTTTGAAAACCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCAGCGCTCG AGCCGCCGAGGCCCTGCAAAAGGGGATCGCGGCCTTGGGGTGTGGGCTGG AGGGAGGGAGGGAGGGCGGGAGGGAGGGCGAGGGGAGATGGGCCTGCTGG TGGAAGCTGAAGGGGGATTTACTGACGCTCGCGGCCCTGCTGCCGGAGGA GAGTGGTGTGAGGTGAGGGAAGGGGGGAGGGAGGGAGGGAGGGTGTAGTG CTGTCAATACGTGAACAGGGGTCGTGGAGGAAGGTGAGGGAGGAAGGGAA GGAGGGAGGGAAAGAGGATCCGGTTCTTTATGCGTGGCTTCCTCTTACAC TCCACAGGGAAGAGGAGGCGGCGGCGGCGTATGGTCAGGCGTACATTTTG GCCCGCACAGAGGAGGAGAAGGGCAAGAGCAAGGTAGGGAGGGAGGGAGG GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTTCTTGTATGTTT GCAACTCCCGCTCGTCTCATCCGTCCGTCCATCCTTCCCTCCCTCCCTCC CTCCCTCCTTCTCTCCATGAGAAGGTTGATGAGGGCATGGCCTGGCTGGC CCTCGGGAGGAAACAGCGGATGAAGGCAGGAGAAGGTTCCTTCCCTCCTC CTCCTGCTGCTGCTGCTGCTGGGGACGAATCTACTCGGGCAGCAAAGGCA TGTTTTATCGCCGCCCTTAAAGAGCATGATCCTTGCCTGGCCGATGCCTG GAATGGGCTGGGAGTGTGTGAGGCGAGGGAAGGGAGGGTTCTGGTGGCTC AGGTGGGGAGGGAAGGAGGGAGGGAGGGAAAGGGGGAGGGAAGGAAGTGT AAACAGCACAGTACCTCCTCTTTTGAAACCATCTTCTCCCTCCCTCCCTC CCTCCTTCCCTCCCTCCTTCCCTCCCTCCTTCCCTCCCTCCCTCCTTCAG CACTGCTTCGTCCGTGCCCTTCAGCTGGAGTCTCACCCGGGCGCATGGGC CAACCTCGGCATGCTCTACGCGTCCGTTGGGAGGGAGGATTTGGCGCGAG AGGCTTTAAGGGGCTTGCAGCTCGTGCAGGTGAGGAGGGAGGGAGGGAGG GAAAGAGGGAGGGAGGAAGTGCACATTAGAAAACCCCAAACATATCCACC GAGGAGCTCCTTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC CCTTCCTCCCTTGGTAGGACCATCCAATGATGTGGATTGGTCTGGCTTTG CTGCTGGAGGAGCGCGGAGAGCTAGGCACCGCCCGAGAAGCCTATCGGGC GGCGTTAGAGGTAGGCGTCGTCCCCTCCCTCCCTCCCTCCCTCCCTCAAT TCCTCCCTTCCCCCCGCCCTCCGTCTTTCCTTCCCTCCCTCACGCCCTCC TGCCATTCAAATTTCCCGCTTTGCTTCTCCTCTCCCTCGTTTTGGTCCTC CACATTTTCAAGTGATTCTTTCCCTCCCTCCCTTCCTCCCTCCCTCCCTC CCTCCCTCCCTCCCTCCCTCCCTCTCTACCTCCATCCAGGTCGGTGCACA TCCCGAGGCTCAGCTAGGGCTCGCCTCCGTCTCTGGAAGGGATGGCGAGG GGGAGGGCGGGGGGGAGGAAGGGCTGACGCAGGCCCTGATGGCCCATAAC CAGCGGCCGGCGCATGTGTATGGAGGCGTATTGCTCGCGCAAAAACTGCT GTGGGTGGCGAGGTGGGGAGTGGGAGAGAGAGGGAGGGAGGGAGGGAGGG AGGGAGGGAGGGAGGGAGGGAGAGAGAGAGAGGGAGGGAGGGAGAGAGAG AGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAAGAATCACCT GAAAATGTGGAGGACCAAAACGAGGGAGAATAGAGGCAGAGCAGGAAATT TGAATGGCAGGAGGGCGTGAGGGAGGGAGAAATGGCGGACAGTGATCAGC ACACAGGTCCACCTGCCACACCACTGACTTTACCTCCTTCTCACCCTCCC TCCCTCCCTCCCTCCCTCCTTTCTTGACCACAGGCAACCGGCGGCAGCGC TGCGTGTTCTCGACGCGCTGGAGGAGGTGGCTCTGGCTAAGCATAAAAAG GCCGAGGCTGTGGTGCAGGCGACAAGGGCAAGGTAGGTAGGGAGGGAGGG AAATAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTTGCAGAGTTTCGA GGGTGGCAGCGACGGTCATGTAGGAAGAGGGGGAGGGAGGGACGGAGGGC TGATAACTCACACTTCATCACAAATTCCTCTTGCTCTTTTTCAACTACTC ACCAGAGCGAGAGCAGCCCTGGGTCTCTCCCCTCTACTGCCTTCCTCCTC CTCCTCCTCCCTCCTGCTGACCGCCCGCGCCGCGGCTGCCCGAGGGGAGT GGGGCGAGATGGCTGTGGCCTTACTGGCACTGGAAGGAGGAGGAGGAGGA AGAGGAGACGGAGAGGAGGAGAAGGAGGTGGTATCTCGGTGTGTGGTGAA AACCCTCGGTCTCCTGGCTCAGGGCGATGCAACGGTACGTCCCGCCTTCC CTCCCTCCCTCTCTCCTTCCCTCCTTTATTACCTTTCCCCTTCCTTACTT CTCACCATTCTAGAGTTGCTTCTCACTCCTTCCTCCCTCCCCTCCTCCTT CCCTTCCACTCGCCCTTCCTTTCTCCCCTCATCATCATACATAGGGCGCC AAAGCCACCCTCTCCACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC TCGCTGCAAGCAGCAGCTTCAGGCCTTGAGAGCCATTTTGGGGGAAACAG AGAAGGAACAGGAGAAGGGCGAGGAGGGAAAGAGAGAGAAAGGGATGAAG GAAAAGGAGGCATGCCTCCAAGCCATCTGCAAGGAGGCGGAGTCCATGCA GGATCCAGAGGTGACGAGGGAACGAGGGAGAGAGGGAGGGAGGGAGGGAG GGAGGGAGGGAGGGAGGGAAGGAATCAGGGTACTTCAGAAAGTCAAGCGA CACAAAAAAAGCTCACTCATCCTCCTTCCCTTCTTCCCTCTCTCCTTCTC TCCCCCCTTCCGTCCCTCCCTCCTCCCCTTGCAGGCCCCTCCCTCCCTCG CAAGCTACCCGGAGGTTCTCCAGCTCTTCCCCTCTTCTCTCTCCGTCCTC GCCCTCTGCGCATCACGGACTCACTCCTCCCTCCCTCCCTCCTCCTCTGC CTTCTCCCTTCCCGCCTTGTTGGATGCCCTGTCTTCTGGTGGTAGTATCT CGTCCTCCCCCCCTTCCACTTCCTCCCCCCCTCCCTCCTTCTCCACGGTG GAAGACCTGGCAGTGGCTGCGACTGTGCTCTGGCTTCGAGAAACCACAGG GCAGGTGGAGGGAGGGAGGGAGGGAGGGCGGGGTCGAAAGATGTTGTTGA AGTTAATTCACCTCTATCCCCTGCTGGAACGACCGAGAGAATTTCTGGAA GTGGGCCAGGCGGCATGGGGAGGGGGGGGGTAGGGCAGACACTGTGGGGA AGGACGACGAGCAAAGGCTTGCCGTTGGGGTGGGAGGACGCGATAGGCCG TTGTCGACGAGCAGCAGCAGCAGGAGAGTGGGAAAAGGCCTCCGGGGAGT ATTGCGCAGTTTTGGGGAGGGTGAAGGAGGGGTGGGTGGACGGGTGGAGA GAGTGGGCGGAGGTGGTGCTGAAGTGGAAGGGGGGAGTAGCAGCGAAAAA AATCTGGCGTTTTGTTCTGAGGGAAATGGGATCCGTGCTGTCGCCGGTGG GGAAGGTAGGCGGGGAGGGAGGGAGGGAGGGTGGGAGGGTGAGGAGGGAG GGAGGCAGGCTCGACCAAACGCCACGCGATCGACCACTCACGTATGCCCT TTTTCTTCCTCCCTCCCCGCCCCTCCCTCCCTCCCTCCTTCCAGGCCGCG ATCCACATCCGTCTAGCTTCTCTCTTGTACGAGGAAGGCGGGGCGGAGGA AGGGATGGAGGAACTGGGCGAAGCAGCAAAAGCAAACCCGGGCAAAGGCG ACGCCGCTGCCTTTTGGTTGAGGGGCATGTTGTGGAAGAGGGAGGGAGGG AGGGTGGGAGGGAGGGAGAAGCAGGTGGTGCAGAGTTGGGGAAAAGCGCG CGAAGCGAGACCGACGTGTGGGCTCTTGAGAAGGCTGGCCGGGGGGGAGG GAGGGAGGGAGGGAGGGGAGTAAGAAGGAAGGAGGAGAGATCGAGGCAAT GCACAGGCAGAGAGAGGAGGGAGGGGAGGGCAGGAAAGGGAATGCGGTGC ATGGATACACATGGCTGTATGTGGTCGTTGCAGTGGAGATCGGACCATCA AATTAATCATCCTCTTACGCGTGTCCGGGCTGGCGGGGAAAGATAGAAAA AACACATTATGGAAATCTA
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Coding sequence (CDS) from alignment at chr20:758484..766552-

>NO20G02480.1 ID=NO20G02480.1|Name=NO20G02480.1|organism=Nannochloropsis oceanica|type=CDS|length=3237bp|location=Sequence derived from alignment at chr20:758484..766552- (Nannochloropsis oceanica)
ATGTGTAACGGTCACGTCATCCCTCAAGCTCTGCAGCTCCTCACCCATGC
CACTGAATCAGGGCCGCCCCTCTCCCTCGCCCTCTCCCTCCTCCTGGAGC
TCCACGCCATCCACACCCGCTTCTCCTTCACAGATCCCTCCTCCTTCCTA
GCACTGCTCGACCAGACCGACGCCACTATCAGGCGAGAAACACCCAATTG
GGGCGTCCCGCAACGACGAGACCTCCTCGTCATCTCCCTCCGGGCCCGCG
CCGCCTTTGCCGAGTGGATGGGGAAGAAAAACGAGGCCACGGCATGTTAT
AAACAGCTGCTGGGAAAGGCAGAGGGAGCCTGCGGACTGGCGTCCCTCCT
CCTCCTGGAGCCCCAGCTGGACGAGGAAGACGGAGAAGGAGGAGTTGAGG
GAGGAGGAGGGGAGGGAGCAACAGCAGCAACGGCGGCAGCAGCAGAAGAA
GCGTTAACCCTCCTCTCCCCTTTCGTCCACCCTCCCTCTCCGTCCTCCTC
CTCTTCTTCTTCCTTCTCTCCGGAAGCTCAGGCTCTCTACGCCTTTGCCC
TGCTCAAGACCGGACGGGACACCGAACAGGCCGCTTCCCTCCTTTCAACG
GCTGCGGCCGTTAAACCAGGCCTCGCGTATCTCCAAGGCATTAGCCTACT
GGAGGAAGGAGGAGGAAGGGGAGGAGGAGGAGGACGGGAGGGAGGGAAGG
AGAGAGGGCGAGAGGAAGAGGCGAAGGCGTGCTTCCTCCGTGCTGCCAAG
GCTGACCCTTACCACGGACCGACCTTCCGAGAGCTCGGCCTCCTCTTCGC
AAGGGGCGAGGAAGAACAAGACAGGGAGCGCGCCCTCAAATGTTTGGCCA
AAGCGATCTCTCTCTGTCCCCTCGATGCCCGGGCAGGCGAAGCCTTCTCC
CGCCTTTGCCTCCAGACAGCACGTACCGAGGAAGCCAAGCGCGTCTGGGA
AACAGTCACAAGTTCCCACGTTGCTGCCGCCTGGGCATGGCAATGGAGGG
CGCTTGAGCGCCTACAAGCCCCCACCCAAGAGGCAGGGAGCGATGAGATG
GCCGTAATTTATGCCCAATCCGCCCTCCGTGCCAGACCTATGGACAAGAG
GGCTTGGGCCTGCCTTGGCCGCGCCTACGCCCGCCTGGGGAAAACGGCTT
CGGCGTTCCGAGCCTTCAGTCGGGCGCATGAGCTCAAGGCTGATGTTGCC
CTCGAGCTGGGAAGAGCGCAGATGGAAGCCGGCCTCATTGACGAGGCAGT
TGCTACCCTCCAATCAACTCCATCCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAACAGCAGTAGCCCTCCCTCTCTCCCTCCATCCCCCCCTCCCTCT
GCCGATCCCCTCCTGAAGAAGGAGCTGGCCTCGGCCTGTCTGGCCCTGGC
GTACAATTGCCTCGCAGACGGCTTCCACGCTCGAGCCGCCGAGGCCCTGC
AAAAGGGGATCGCGGCCTTGGGGTGTGGGCTGGAGGGAGGGAGGGAGGGC
GGGAGGGAGGGCGAGGGGAGATGGGCCTGCTGGTGGAAGCTGAAGGGGGA
TTTACTGACGCTCGCGGCCCTGCTGCCGGAGGAGAGTGGTGTGAGGGAAG
AGGAGGCGGCGGCGGCGTATGGTCAGGCGTACATTTTGGCCCGCACAGAG
GAGGAGAAGGGCAAGAGCAAGGTTGATGAGGGCATGGCCTGGCTGGCCCT
CGGGAGGAAACAGCGGATGAAGGCAGGAGAAGGTTCCTTCCCTCCTCCTC
CTGCTGCTGCTGCTGCTGGGGACGAATCTACTCGGGCAGCAAAGGCATGT
TTTATCGCCGCCCTTAAAGAGCATGATCCTTGCCTGGCCGATGCCTGGAA
TGGGCTGGGAGTGTGTGAGGCGAGGGAAGGGAGGGTTCTGGTGGCTCAGC
ACTGCTTCGTCCGTGCCCTTCAGCTGGAGTCTCACCCGGGCGCATGGGCC
AACCTCGGCATGCTCTACGCGTCCGTTGGGAGGGAGGATTTGGCGCGAGA
GGCTTTAAGGGGCTTGCAGCTCGTGCAGGACCATCCAATGATGTGGATTG
GTCTGGCTTTGCTGCTGGAGGAGCGCGGAGAGCTAGGCACCGCCCGAGAA
GCCTATCGGGCGGCGTTAGAGGTCGGTGCACATCCCGAGGCTCAGCTAGG
GCTCGCCTCCGTCTCTGGAAGGGATGGCGAGGGGGAGGGCGGGGGGGAGG
AAGGGCTGACGCAGGCCCTGATGGCCCATAACCAGCGGCCGGCGCATGTG
TATGGAGGCGTATTGCTCGCGCAAAAACTGCTGTGGGTGGCGAGGCAACC
GGCGGCAGCGCTGCGTGTTCTCGACGCGCTGGAGGAGGTGGCTCTGGCTA
AGCATAAAAAGGCCGAGGCTGTGGTGCAGGCGACAAGGGCAAGAGCGAGA
GCAGCCCTGGGTCTCTCCCCTCTACTGCCTTCCTCCTCCTCCTCCTCCCT
CCTGCTGACCGCCCGCGCCGCGGCTGCCCGAGGGGAGTGGGGCGAGATGG
CTGTGGCCTTACTGGCACTGGAAGGAGGAGGAGGAGGAAGAGGAGACGGA
GAGGAGGAGAAGGAGGTGGTATCTCGGTGTGTGGTGAAAACCCTCGGTCT
CCTGGCTCAGGGCGATGCAACGGGCGCCAAAGCCACCCTCTCCACCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCTCGCTGCAAGCAGCAGCTTCAG
GCCTTGAGAGCCATTTTGGGGGAAACAGAGAAGGAACAGGAGAAGGGCGA
GGAGGGAAAGAGAGAGAAAGGGATGAAGGAAAAGGAGGCATGCCTCCAAG
CCATCTGCAAGGAGGCGGAGTCCATGCAGGATCCAGAGGCCCCTCCCTCC
CTCGCAAGCTACCCGGAGGTTCTCCAGCTCTTCCCCTCTTCTCTCTCCGT
CCTCGCCCTCTGCGCATCACGGACTCACTCCTCCCTCCCTCCCTCCTCCT
CTGCCTTCTCCCTTCCCGCCTTGTTGGATGCCCTGTCTTCTGGTGGTAGT
ATCTCGTCCTCCCCCCCTTCCACTTCCTCCCCCCCTCCCTCCTTCTCCAC
GGTGGAAGACCTGGCAGTGGCTGCGACTGTGCTCTGGCTTCGAGAAACCA
CAGGGCAGGTGGAGGGAGGGAGGGAGGGAGGGCGGGGTCGAAAGATGTTG
TTGAAGTTAATTCACCTCTATCCCCTGCTGGAACGACCGAGAGAATTTCT
GGAAGTGGGCCAGGCGGCATGGGGAGGGGGGGGGTAG
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Synonyms
Publications