NO20G02400, NO20G02400 (gene) Nannochloropsis oceanica

Overview
NameNO20G02400
Unique NameNO20G02400
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2652
Alignment locationchr20:726407..729058 +

Link to JBrowse

Properties
Property NameValue
DescriptionGlycosyl group 2 family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:726407..729058 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR029044Nucleotide-diphossugar_trans
IPR001173Glyco_trans_2-like
Homology
BLAST of NO20G02400 vs. NCBI_GenBank
Match: XP_005854062.1 (glycosyl group 2 family protein, partial [Nannochloropsis gaditana CCMP526] >EKU22298.1 glycosyl group 2 family protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 627.9 bits (1618), Expect = 3.400e-176
Identity = 293/426 (68.78%), Postives = 353/426 (82.86%), Query Frame = 0
Query:   11 ILGILACLLLGLSDAAGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLRAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYDVPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNPRTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVERDYAVYMLSRCYLALDDVANARKYGELSASISNRAEPLYDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFEQATLSRHIYPTQPTLVLEAGLSFLNNVHAPQYLRNYFYKREWGSHTVQYLETTMSYHHYDATHAKTFWQFILHPTSSTASDNTTDVDNSCPLS 437
            + G + CL    +     NTS CLAMI+KNEGPILPRLFDS+RGFVSEYCVMDTGSTDDTVDVLR+ID+PG++LHGPFINFAQARN MI++CR++M SCDYF+LLDADM+L+V P W+W+ +D +DVYNLIQ S VEYENVR+IRRTAD+IKV+GATHEYYDVPD+Y+R LI KDL+YI+DVGDGKAKGDK +RDE LLRQ+L  DP+NPRT+FYLANTL+DM RYA+AIP YEQRS MDNGWWVERDYAVYML +CYL L+D++NARKYGEL+A IS RAEPLYDL+YYLHH E Y LAWYYYTLAS IPKP V + LFIV DIYAFWLDFE+ATLSRHI+P QP L L AG+SFLNN++APQYLR YFY+  W    ++ L +T++YHHY A+    FW  +L+ ++ T    +T  ++   +S
Sbjct:    7 VWGTIFCLQESNAIKRDTNTSVCLAMIIKNEGPILPRLFDSVRGFVSEYCVMDTGSTDDTVDVLRSIDVPGQVLHGPFINFAQARNLMIDECRKLMKSCDYFLLLDADMILKVHPEWSWNIIDDRDVYNLIQESKVEYENVRLIRRTADKIKVIGATHEYYDVPDEYSRELISKDLIYIEDVGDGKAKGDKFERDEYLLRQDLERDPSNPRTVFYLANTLKDMKRYAEAIPLYEQRSFMDNGWWVERDYAVYMLCKCYLGLEDLSNARKYGELAARISKRAEPLYDLVYYLHHNELYTLAWYYYTLASQIPKPAVKETLFIVGDIYAFWLDFEKATLSRHIFPDQPILALTAGVSFLNNMYAPQYLREYFYREAWIESIIKCLRSTVTYHHYHASQPDIFWHSVLNNSAETECRYSTSGESDRRIS 432          
BLAST of NO20G02400 vs. NCBI_GenBank
Match: EWM20048.1 (glycosyl transferase [Nannochloropsis gaditana])

HSP 1 Score: 312.0 bits (798), Expect = 4.100e-81
Identity = 144/221 (65.16%), Postives = 175/221 (79.19%), Query Frame = 0
Query:  216 DPNNPRTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVERDYAVYMLSRCYLALDDVANARKYGELSASISNRAEPLYDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFEQATLSRHIYPTQPTLVLEAGLSFLNNVHAPQYLRNYFYKREWGSHTVQYLETTMSYHHYDATHAKTFWQFILHPTSSTASDNTTDVDNSCPLS 437
            DP+NPRT+FYLANTL+DM RYA+AIP YEQRS MDNGWWVERDYAVYML +CYL L+D++NARKYGEL+A IS RAEPLYDL+YYLHH E Y LAWYYYTLAS IPKP V + LFIV DIYAFWLDFE+ATLSRHI+P QP L L AG+SFLNN++APQYLR YFY+  W    ++ L +T++YHHY A+    FW  +L+ ++ T    +T  ++   +S
Sbjct:   11 DPSNPRTVFYLANTLKDMKRYAEAIPLYEQRSLMDNGWWVERDYAVYMLCKCYLGLEDLSNARKYGELAARISKRAEPLYDLVYYLHHNELYTLAWYYYTLASQIPKPAVKETLFIVGDIYAFWLDFEKATLSRHIFPDQPILALTAGVSFLNNMYAPQYLREYFYREAWVESIIKCLRSTVTYHHYHASQPDIFWHSVLNNSAETECRYSTSGESDRRIS 231          
BLAST of NO20G02400 vs. NCBI_GenBank
Match: EWM20169.1 (glycosyl group 2, partial [Nannochloropsis gaditana])

HSP 1 Score: 180.6 bits (457), Expect = 1.400e-41
Identity = 83/115 (72.17%), Postives = 99/115 (86.09%), Query Frame = 0
Query:   11 ILGILACLLLGLSDAAGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLRAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDP 126
            + G + CL    +     NTS CLAMI+KNEGPILPRLFDS+RGFVSEYCVMDTGSTDDTVDVLR+ID+PG++LHGPFINFAQARN MI++CR++M SCDYF+LLDADM+L+V P
Sbjct:   14 VWGSIFCLQESNAIKRDTNTSVCLAMIIKNEGPILPRLFDSVRGFVSEYCVMDTGSTDDTVDVLRSIDVPGQVLHGPFINFAQARNLMIDECRKLMKSCDYFLLLDADMILKVHP 128          
BLAST of NO20G02400 vs. NCBI_GenBank
Match: EWM20245.1 (glycosyl group 2, partial [Nannochloropsis gaditana])

HSP 1 Score: 179.5 bits (454), Expect = 3.200e-41
Identity = 82/115 (71.30%), Postives = 99/115 (86.09%), Query Frame = 0
Query:   11 ILGILACLLLGLSDAAGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLRAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDP 126
            + G + CL    +     NTS CLAMI+KNEGPILPRLFDS+RGFVSEYCVMDTGSTDDTVDVL++ID+PG++LHGPFINFAQARN MI++CR++M SCDYF+LLDADM+L+V P
Sbjct:   14 VWGSIFCLQESNAIKRDTNTSVCLAMIIKNEGPILPRLFDSVRGFVSEYCVMDTGSTDDTVDVLKSIDVPGQVLHGPFINFAQARNLMIDECRKLMKSCDYFLLLDADMILKVHP 128          
BLAST of NO20G02400 vs. NCBI_GenBank
Match: YP_009174077.1 (putative glycosyl transferase [Yellowstone lake mimivirus] >BAT21964.1 putative glycosyl transferase [Yellowstone lake mimivirus])

HSP 1 Score: 176.8 bits (447), Expect = 2.000e-40
Identity = 110/323 (34.06%), Postives = 174/323 (53.87%), Query Frame = 0
Query:   29 NTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLRAI----DMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQIS-SVEYENVRIIRRTADRIKVVGATHEYYDVPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNPRTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVERDYAVYMLSRCYLALDDVANARKYG-ELSASISNRAEPLYDLIYYLHHREQYALAWYYYTLASGI--PKPPVDQALFIVLDIYAFWLDFE 344
            N + CL MI+KNE  I+ RL  S+   +  +C+ DTGSTD+T +++       ++ GKI+  PF NF   RN  +  C   +   DY +LLDADM+L +   +N + L   D + ++Q S    Y+N+RI++      K VG THEY + P +     I K  ++I+D GDG  K DK +RD  LL   +A++P N R  FYLAN+  D+G+  DAI  Y++R  +  GW  E  Y+ Y +  CY  +  +++A  Y  E    +  R E L+++++Y   +    LA   Y +   I   K  +D  LF+   +Y++ + +E
Sbjct:    3 NPTLCLNMIVKNESKIIHRLLTSVLPIIDAFCICDTGSTDNTCEIITEFFEKHNIKGKIIKEPFKNFEYNRNFSLLNC---IGLTDYVLLLDADMILDI-RNFNKNMLSMSDSFYILQGSDQFYYQNMRIVKNNG-LYKYVGVTHEYINTPSNNRTIGIDKTQLFINDYGDGGCKSDKFERDILLLTNGIAEEPTNVRYHFYLANSYHDLGKNEDAIEMYKKRIAL-GGWNQEVWYSYYRIGLCYNKMKKISDAIYYWLEAYNYLPERLEALHEILHYYRVKGNQKLAIDIYNICKTIFDKKLKIDDYLFLQASVYSYKIYYE 319          
BLAST of NO20G02400 vs. NCBI_GenBank
Match: PPD38108.1 (hypothetical protein CTY16_20695 [Methylobacter sp.])

HSP 1 Score: 170.2 bits (430), Expect = 1.900e-38
Identity = 106/326 (32.52%), Postives = 169/326 (51.84%), Query Frame = 0
Query:   28 HNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLR--AIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYDVPDDYTRGLIP-KDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNPRTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVERDYAVYMLSR----CYLALDDVANARKYGELSASISNRAEPLYDLIYYLHHREQYALAWYYYTL-ASGIPKPPVDQALFIVLDIYAFWLDFEQA 346
            +N + CL M+++NE  ++ R  +S +  +  + ++DTGSTD+T ++++   +D+PG++ H  +++F   R  ++   R       Y ++LDADM + V   +        D Y  I+    E     ++         VG THEY D P   T+  I   D + +    DG  + DK +RD RLL ++L  DP N R++FYLA + +D+G+Y DA+ +YEQR+ M+N W  ER +A     R    C    D+   A    +  A   +RAEP+Y ++ YL  +  Y LAW      A+G+P PP D  LFI   +Y + L  E A
Sbjct:    3 NNKTICLCMMVRNESHVIKRALESAKPHIDYWVIVDTGSTDNTEEIIQQTLLDIPGELHHSKWVDFGHNRTEVVRLAR---NKAAYLLILDADMAVNVYAPFKHKLT--ADAYE-IRYEGDESYTQHMLVAAHHNWHYVGVTHEYIDAP---TKQYIDWMDELTLTHFADGGMRSDKFERDIRLLTEDLQKDPGNARSLFYLAQSYKDLGKYKDALYWYEQRAAMENSWDEERWFAQMQAGRMKLLCNYPWDEAVQALL--KAYAMRPSRAEPIYTVVRYLREQGSYQLAWQLCAFAANGMPLPPRD-ILFIDTPVYRYLLQLEYA 316          
BLAST of NO20G02400 vs. NCBI_GenBank
Match: WP_000526207.1 (glycosyl transferase [Bacillus thuringiensis] >ADY21567.1 glycosyl transferase, group 2 family protein [Bacillus thuringiensis serovar finitimus YBT-020] >OTX63306.1 glycosyl transferase [Bacillus thuringiensis serovar finitimus])

HSP 1 Score: 167.9 bits (424), Expect = 9.500e-38
Identity = 112/358 (31.28%), Postives = 175/358 (48.88%), Query Frame = 0
Query:   26 AGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVL----RAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYD-----VPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNP----RTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVER-DYAVYMLSRCYLAL--------------DDVANARKYGELSASIS------------NRAEPLYDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFE 344
            AG     CL MI+KNE  I+ R  ++ +  V    + DTGSTD T +++    +  ++PG + H PF NF   R+  ++  ++     DY ++LDADM+L VDP ++   L       L     ++Y   R+++ +    K VG THEY+D     V +DY   +   + + ++D GDG +K DK +RDERLL Q L+D    P    R +FYLA T   + ++ D+I +Y++R  ++ G WVE   Y++  +  CY  L              D+  NA+K  E   +++             RAEPLY L      + Q  +A  Y      IP P  D  LF+   +Y +  D+E
Sbjct:    9 AGEEKKLCLCMIVKNESRIMERCLNATKSIVDFVSICDTGSTDHTPEIIENWCKENEIPGTVHHEPFKNFGYNRSLAVSLAQKTYPEADYLLILDADMILEVDPNFDKTSLTEDHYLTLQYDIHIKYWLTRLLKASLP-WKSVGVTHEYWDIDRSKVGEDYNTRVARLETLVVNDPGDGGSKADKFERDERLLLQGLSDPETTPDLHIRYLFYLAQTYFHLSQFEDSIKWYKKR--VEAGGWVEEVFYSLLRIGFCYEQLATRSANKQLEVTEVDEKENAKKQEEQYTALAVLYFQKAWEYRPTRAEPLYQLARMYRLKSQNNIALMYALQGKEIPFPKND-LLFVDYHVYDYLFDYE 362          
BLAST of NO20G02400 vs. NCBI_GenBank
Match: WP_016717391.1 (glycosyl transferase [Bacillus cereus] >KYQ04691.1 Dolichol-phosphate mannosyltransferase in lipid-linked oligosaccharide synthesis cluster [Bacillus cereus])

HSP 1 Score: 167.5 bits (423), Expect = 1.200e-37
Identity = 110/358 (30.73%), Postives = 177/358 (49.44%), Query Frame = 0
Query:   26 AGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVL----RAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYD-----VPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNP----RTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVER-DYAVYMLSRCYLAL--------------DDVANARKYGELSASIS------------NRAEPLYDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFE 344
            AG     CL MI+KNE  I+ R  ++ +  V    + DTGSTD+T +++    +  ++PG + H PF NF   R+  ++  ++     DY ++LDADM+L VDP ++   L       L     ++Y   R+++ +    K VG THEY+D     V ++Y   +   + + ++D GDG +K DK +RDERLL Q L+D    P    R +FYLA T   + ++ D+I +Y++R  ++ G WVE   Y++  +  CY  L              D++ NA+   E  ++++             RAEPLY L      + Q  +A  Y      IP P  D  LF+   +Y +  D+E
Sbjct:    9 AGEEKKLCLCMIVKNESRIMERCLNATKSIVDFVSICDTGSTDNTPEIIENWCKENEIPGTVHHEPFKNFGYNRSLAVSLAQKTYPEADYLLILDADMILEVDPNFDKTSLTEDHYLTLQYDVHIKYWLTRLLKASLP-WKSVGVTHEYWDIDRSKVGENYNTRVARLETLVVNDPGDGGSKADKFERDERLLLQGLSDPETTPDLHIRYLFYLAQTYFHLSQFEDSIKWYKKR--VEAGGWVEEVFYSLLRIGFCYEQLANRAANKQHEVTEADEMENAKTQEEQYSALAIFYFQKAWEYRPTRAEPLYQLARMYRLKSQNNIALMYALQGKEIPFPK-DDLLFVDYHVYDYLFDYE 362          
BLAST of NO20G02400 vs. NCBI_GenBank
Match: WP_024760579.1 (glycosyl transferase family 2 [Streptomyces exfoliatus])

HSP 1 Score: 167.5 bits (423), Expect = 1.200e-37
Identity = 116/318 (36.48%), Postives = 169/318 (53.14%), Query Frame = 0
Query:   31 SACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLRA--IDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYDVPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNPRTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVERDYAVYMLSRCYLALDDVANARKYGELSASISNRAEPL---YDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFE 344
            S CL MI+KNE  ++ R   S+RG V  + + DTGSTD T D++R     +PG++   P++NF   R+  I + R      DY +LLDAD VLR D      DL   D Y +    S+EY   R++R      +  G THEY     D+ +  +  D++ I+D  DG ++ DK +RD RLL  EL  DP+NPRT+FYLA T+RDMGR  +A+P YE+R+ M  GW  E  Y+  +L    L  +  A       LS +  +R E L   Y+L+  L    +Y  A  +  +++ +     D  LF+   +Y + L FE
Sbjct:    4 SICLCMIVKNESKVIERCLTSVRGLVDTWVITDTGSTDGTQDLIRTALAGIPGELREEPWVNFGHNRSLNIARAR---GRADYLLLLDADHVLRQDGP--LPDLTA-DAYMIRHEGSLEYRIKRLVRGDLP-WRYEGVTHEYLTADRDHVQRNL--DVLSIEDHADGGSRHDKFERDARLLGAELDRDPDNPRTVFYLAQTMRDMGRADEAVPLYERRAAM-GGWGEEVYYS--LLQSGVLQAESGAWPSAMDALSRAWESRPERLEACYELVARLRKMRRYRAA--HAVVSAVLDGRQPDDLLFMQPWVYRYGLLFE 307          
BLAST of NO20G02400 vs. NCBI_GenBank
Match: WP_074601286.1 (glycosyl transferase [Bacillus cereus])

HSP 1 Score: 167.5 bits (423), Expect = 1.200e-37
Identity = 111/358 (31.01%), Postives = 175/358 (48.88%), Query Frame = 0
Query:   26 AGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVL----RAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYD-----VPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNP----RTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVER-DYAVYMLSRCYLAL--------------DDVANARKYGELSASIS------------NRAEPLYDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFE 344
            AG     CL MI+KNE  I+ R  ++ +  V    + DTGSTD T +++    +  ++PG + H PF NF   R+  ++  ++     DY ++LDADM+L VDP ++   L       L     ++Y   R+++ +    K VG THEY+D     V +DY   +   + + ++D GDG +K DK +RDERLL Q L+D    P    R +FYLA T   + ++ D+I +Y++R  ++ G WVE   Y++  +  CY  L              D+  NA+K  E   +++             RAEPLY L      + Q  +A  Y      +P P  D  LF+   +Y +  D+E
Sbjct:    9 AGEEKKLCLCMIVKNESRIMERCLNATKSIVDFVSICDTGSTDHTPEIIENWCKENEIPGTVHHEPFKNFGYNRSLAVSLAQKTYPEADYLLILDADMILEVDPNFDKTSLTEDHYLTLQYDIHIKYWLTRLLKASLP-WKSVGVTHEYWDIDRSKVGEDYNTRVARLETLVVNDPGDGGSKADKFERDERLLLQGLSDPETTPDLHIRYLFYLAQTYFHLSQFEDSIKWYKKR--VEAGGWVEEVFYSLLRIGFCYEQLATRSANKQLEVTEADEKENAKKQEEQYTALAVLYFQKAWEYRPTRAEPLYQLARMYRLKSQNNIALMYALQGKEVPFPKND-LLFVDYHVYDYLFDYE 362          
The following BLAST results are available for this feature:
BLAST of NO20G02400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854062.13.400e-17668.78glycosyl group 2 family protein, partial [Nannochl... [more]
EWM20048.14.100e-8165.16glycosyl transferase [Nannochloropsis gaditana][more]
EWM20169.11.400e-4172.17glycosyl group 2, partial [Nannochloropsis gaditan... [more]
EWM20245.13.200e-4171.30glycosyl group 2, partial [Nannochloropsis gaditan... [more]
YP_009174077.12.000e-4034.06putative glycosyl transferase [Yellowstone lake mi... [more]
PPD38108.11.900e-3832.52hypothetical protein CTY16_20695 [Methylobacter sp... [more]
WP_000526207.19.500e-3831.28glycosyl transferase [Bacillus thuringiensis] >ADY... [more]
WP_016717391.11.200e-3730.73glycosyl transferase [Bacillus cereus] >KYQ04691.1... [more]
WP_024760579.11.200e-3736.48glycosyl transferase family 2 [Streptomyces exfoli... [more]
WP_074601286.11.200e-3731.01glycosyl transferase [Bacillus cereus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G02400.1NO20G02400.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G02400.1NO20G02400.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G02400 ID=NO20G02400|Name=NO20G02400|organism=Nannochloropsis oceanica|type=gene|length=2652bp
CCTCGCTGATTTGCCAAGCCCATAATGGACCTTCCTCGTTCATCTACCTA
CAACCCAACCATACATGCAAACGTCCCCAGACATGCACCCAATTTAAGAG
TGCACCATTACCTCTCAGGTTGTCTAGGTGCGGTCAACGCTCGCGCGGTG
AGAGATGATGGTAGCCAGGCCATTTCATTTCGTGATGTCCGCCCTCTATC
TCGGCTACTTCAGGGCGGCTGCTCCTGCTGCTTCTGCAAGCGAAGCTTTG
AAATTCCCCCACCAACCATCTCCTGCAGACATCAGGAAATGCACCACGTG
GCAAATTGTTCGCCATAGTCTGCAGCTGTCGACCACATGTGGGGTGTTGG
GGGCTTTCATGCGGCGACATCTTTGCTGATTAGCAAAGCCCATGATGGAC
ATTTCACACCCATCTACCAACAGCCCACCCAGAAGTACACATCCAGACAT
GCACACGCACGATTATAAAATGTACAACACCCTCTCACGTCCATCGCCCG
TTCTAGGTGCTGACAAAGTAAAACTTATCAGTAGAACTAATTAGGAGAGT
GTCTAAAGTGTCTTCTCTTCTTTCTCAACCTCAAACATAGTATGAAGCCG
CTTCATCATCAATGCCTGGTCATTTTGGGTATTCTTGCATGTCTACTTTT
GGGACTTAGTGATGCGGCTGGCCATAACACCAGCGCTTGTCTTGCAATGA
TCATGAAGAACGAGGGGCCAATATTGCCCCGCCTTTTTGATAGTATTCGC
GGCTTTGTATCGGAATATTGTGTCATGGATACCGGCTCGACGGACGATAC
TGTGGATGTATTGAGAGCTATTGATATGCCGGGAAAGATTTTGCACGGAC
CCTTCATCAACTTTGCCCAGGCACGCAATGCGATGATCAATCAGTGCCGT
GAGGTGATGACCTCGTGTGATTACTTTGTGCTTCTGGATGCGGACATGGT
GCTGCGTGTTGATCCGGCATGGAATTGGGATGATCTGGATGGGAAGGATG
TGTACAATTTGATTCAGATCTCAAGTGTGGAGTACGAGAACGTGCGGATC
ATCCGTCGCACGGCAGACCGAATCAAGGTAGTGGGCGCAACCCATGAGTA
CTACGATGTGCCCGATGATTACACGCGAGGGCTGATCCCTAAAGACTTGG
TATATATTGATGACGTGGGCGATGGAAAAGCCAAAGGAGACAAATCACAA
CGCGATGAGCGGTTGCTCCGGCAGGAGCTTGCAGACGACCCAAACAATCC
ACGAACAATCTTTTACTTGGCAAATACCCTAAGGGATATGGGAAGGTACG
CCGACGCCATACCCTATTACGAGCAGCGCAGTCACATGGACAACGGATGG
TGGGTGGAACGGGACTATGCTGTGTACATGCTTTCTCGATGCTACCTGGC
GCTAGACGACGTCGCCAATGCTAGGAAGTACGGTGAGCTATCGGCGAGCA
TCTCGAACCGAGCAGAGCCTCTGTACGACTTGATCTACTATCTGCACCAC
CGCGAACAGTATGCCTTGGCATGGTATTACTATACTCTAGCGTCCGGTAT
CCCTAAACCTCCAGTGGACCAAGCATTGTTCATTGTCTTGGACATATATG
CTTTCTGGCTTGATTTCGAACAGGCGACGCTATCGCGGCATATTTATCCT
ACTCAACCCACACTTGTCCTTGAGGCAGGGTTATCGTTCTTGAACAATGT
GCATGCGCCCCAGTACTTGCGGAACTACTTTTACAAGAGAGAATGGGGCT
CACATACAGTGCAATATCTCGAGACTACCATGTCGTACCACCATTATGAT
GCGACACACGCCAAGACGTTCTGGCAGTTCATACTTCACCCAACATCCTC
AACAGCAAGTGATAATACCACCGATGTGGACAACTCGTGCCCTCTCAGCT
TATTGGAAGGACATAGACCCGAGGAACTCATGGACGATGAGACTCTTCCA
AACCACCTTCCATTATTTGCGACCATGCCTGAGGTGGAGGTGTCGTGCAT
AAACCAGTGGTACCCTATGCAGATAGGTAAAGTGGTGGAGGGGGTATGTG
AGGTGCACACCTCTGTTGCGACTCCTCGCAGTTTCTCGTTCCTAAGCAAA
GGCAGCAACGGTGCTCTATATCAAGACGCCACGTGGTTTTTAGCAAAGTC
GCATACCGAAGATACGGCATCAGGCAGAGTGCTTTTCCACTTTGTTGTCA
TAGATGCTAGTTCTCGCATCAAAACTTATACGTTGCCCTTTATGCTGAGG
GAGACGCCGTCTGGTACGAATGCCGAGACGGCTTTGTTCTTGCGAGAGGA
CGAAATCATCATCGTTTTCATTGATGGTGAGGATGCGGGGGACGTGACAT
CTGTGGTCCATCGCCTCCCGTTGATAGCTTTGGGCCCGTTGCTAGTGACA
GGACCTAAGCATTAAAAGGGTGCTGCTCCAGTTATGATAAACGTACTAAC
CTCTGCCATATATTATCCTCTTGAAGACTCTGTGCCTTTTATTTCGATTC
CGACGTGCTGTTCTCATTTCCCGGTACATGTACGATGGAACTAGCCTGTA
CCTAATTCCTCGTGTCAGTCTATTGAGAAAAAGTCAATCAATGCCAACCA
AAGAACCAATCACGAAGGCATTTAGACTAGCATTGACGTACCCATTTATC
TC
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protein sequence of NO20G02400.1

>NO20G02400.1-protein ID=NO20G02400.1-protein|Name=NO20G02400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=608bp
MKPLHHQCLVILGILACLLLGLSDAAGHNTSACLAMIMKNEGPILPRLFD
SIRGFVSEYCVMDTGSTDDTVDVLRAIDMPGKILHGPFINFAQARNAMIN
QCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYEN
VRIIRRTADRIKVVGATHEYYDVPDDYTRGLIPKDLVYIDDVGDGKAKGD
KSQRDERLLRQELADDPNNPRTIFYLANTLRDMGRYADAIPYYEQRSHMD
NGWWVERDYAVYMLSRCYLALDDVANARKYGELSASISNRAEPLYDLIYY
LHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFEQATLSRH
IYPTQPTLVLEAGLSFLNNVHAPQYLRNYFYKREWGSHTVQYLETTMSYH
HYDATHAKTFWQFILHPTSSTASDNTTDVDNSCPLSLLEGHRPEELMDDE
TLPNHLPLFATMPEVEVSCINQWYPMQIGKVVEGVCEVHTSVATPRSFSF
LSKGSNGALYQDATWFLAKSHTEDTASGRVLFHFVVIDASSRIKTYTLPF
MLRETPSGTNAETALFLREDEIIIVFIDGEDAGDVTSVVHRLPLIALGPL
LVTGPKH*
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Synonyms
Publications