NO20G02390, NO20G02390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO20G02390 vs. NCBI_GenBank
Match: XP_002179040.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49738.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 164.1 bits (414), Expect = 1.400e-36 Identity = 132/390 (33.85%), Postives = 172/390 (44.10%), Query Frame = 0 Query: 163 PPAATLIAWCKNVVAHDMGLKDEDLLDD-DFYFIGP-FDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPLSTFSVQPPLRALLETVKSKTSSLLPXXXXXXXXXXXXXXXXXXXXXXXMPVLPSETTLTEAELLSLASSFLSSSPSSPLPPSLLPSSIPSLYWLDCDWHGAFSDITILTYNLRLDRHQPATVWADVRRRGTHTGSKSFGGKEGSLFAIPPASGLPYVSAPEAVSLTFNDKKQLVRMTAAAVLDREEGNTGGLXXXXXXXYALNRPSLPLLTRPLRFHSLREWKTSILKSFAG 551 P + L+ K V+A D+GL+D LLDD +F I P D P+GK +I FDLRG FPD D+RAHDFR+DE P V T R GT RG+L + + PT V+ PPEA S TF +GK KL GF MD GN+ G G A G P S + + P L + K P VL S L + LLS ++ S+P + S S Y + F++I + R+D + P VW DV+ P A G Y AP++ S TF+D+ R+TA VLD GN GGL YALN LLTRPL ++ ++ IL G Sbjct: 81 PSPSGLVRRTKLVLATDLGLQDPSLLDDQEFKCISPGLDQPLGKTDYIAAGRFFDLRGTFPDLDYRAHDFRIDETDPKTVRLTCRVTGTMRGELRLRTANLPPTNIVMFCPPEAVSMTFNDQGKVTKLCMGFCMDRQVGNTQGTTGVQAAATIAGQPPSNWELYPGLSVV------KRFFGRPVTPIVENNAILAPFPETVMVQLAKGVLGSNMGLEDPTLLSNDFAY-----STPFIAPVSKFSFLSNYAAE-----EFANIDPSLSHFRIDPYNPTRVWVDVK---------------------PSAPG--YEGAPQSYSFTFDDEGFCTRVTARYVLDPSIGNGGGLGGPDGYKYALNDAPSDLLTRPLP-EAVGRFRKKILSPITG 430
BLAST of NO20G02390 vs. NCBI_GenBank
Match: GAX23391.1 (hypothetical protein FisN_15Lh109 [Fistulifera solaris]) HSP 1 Score: 149.4 bits (376), Expect = 3.500e-32 Identity = 122/378 (32.28%), Postives = 166/378 (43.92%), Query Frame = 0 Query: 168 LIAWCKNVVAHDMGLKDEDLLDDD-FYFIGP-FDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPE-GKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPLSTFSVQPPLRALLETVKSKTSSLLPXXXXXXXXXXXXXXXXXXXXXXXMPVLPSETTLTEAELLSLASSFLSSSPSSPLPPSLLPSSI----PSL------YWLDCDWHGAFSDITILTYNLRLDRHQPATVWADVRRRGTHTGSKSFGGKEGSLFAIPPASGLPYVSAPEAVSLTFNDKKQLVRMTAAAVLDREEGNTGGLXXXXXXXYALNRPSLPLLTRPL 533 L+ K V+ D+GL D LLDD+ F ++ P D P+ K ++ FDLR AFPD ++RAHDFR+D V T R GT RG L + + PT + + PPE +S TF E GK +KL GF MD GN+ G G + A G P+S + + PP +L+ + LP V E ++ LA + S+ +S + PSLL S PSL +L+ F D+ N R+D + P VW D++ GT Y P+A+S TF+ R+TA AVLD GN GGL YA + S PL TRPL Sbjct: 77 LVLQAKRVLNSDLGLLDPSLLDDEKFQWVSPTVDKPLDKTDYLAAGRFFDLRAAFPDLNYRAHDFRIDIDDDATVRCTCRITGTMRGALRLRDVILSPTGKTMICPPEGFSMTFDLESGKLVKLCTGFAMDRLVGNTQGTTGVVAAAITGGQPISDWDIYPP-ATVLKRFFGRPVKPLP------------------------EVSNFLAPFPETVMIQLAKGIIGSNMAS-VDPSLLAQSFTYMTPSLGPIGKEEFLENFAKEEFQDVDPRISNYRVDPYDPERVWVDLKPVGT-----------------------GYQGTPQAMSFTFDGDGFCTRITAGAVLDPTIGNGGGLGGPEGLKYARGQASNPLTTRPL 405
BLAST of NO20G02390 vs. NCBI_GenBank
Match: XP_002507412.1 (predicted protein [Micromonas commoda] >ACO68670.1 predicted protein [Micromonas commoda]) HSP 1 Score: 128.3 bits (321), Expect = 8.400e-26 Identity = 67/164 (40.85%), Postives = 93/164 (56.71%), Query Frame = 0 Query: 162 PPPAATLIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPLSTFSVQP 326 P P A LIA CK ++A + G +D LL DF F+ P GP+ K F+ +F + FPD F + FRVD +P RVW+ R GT+ G P+ G T+ T + ++ PP++ S F G+C +LT G+VMD GN+ GLGG GI A+G+ L QP Sbjct: 88 PIPPADLIAKCKLILAKNNGGEDPSLLASDFKFVAPVVGPLEKERFLAAFQSFKIDEGFPDAKFNYYHFRVDPFEPSRVWYDARFVGTNTG--PLIGGTLPATNKKVESPPQSCSMRFNERGECTQLTVGYVMDKQLGNTGGLGGVYGILYAIGYGLPFPEAQP 249
BLAST of NO20G02390 vs. NCBI_GenBank
Match: GAQ79407.1 (hypothetical protein KFL_000300050 [Klebsormidium nitens]) HSP 1 Score: 128.3 bits (321), Expect = 8.400e-26 Identity = 71/158 (44.94%), Postives = 90/158 (56.96%), Query Frame = 0 Query: 168 LIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPLSTFSVQP 326 LI KNV+A + G+ D LL DDF F P +GK+ F+ +F L+ AFPD + ++F VD +P RVWF TR TH G L +TIKPT + ++ PE S TF EGK KLT G+V D GN+ GLG GI AVGHPL +P Sbjct: 23 LIELTKNVLAKNQGVDDPLLLADDFKFAAPII-YLGKKEFLKAFASFQLKVAFPDVEANFYNFFVDPYEPNRVWFFTRTRATHTGPLKFGARTIKPTYKRVEAAPEVSSMTFNEEGKVTKLTVGYVADRRVGNTGGLGALFGILYAVGHPLPFPEARP 179
BLAST of NO20G02390 vs. NCBI_GenBank
Match: XP_005643580.1 (amidase signature enzyme [Coccomyxa subellipsoidea C-169] >EIE19036.1 amidase signature enzyme [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 126.7 bits (317), Expect = 2.500e-25 Identity = 66/157 (42.04%), Postives = 93/157 (59.24%), Query Frame = 0 Query: 162 PPPAATLIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPL 319 P PA LIA + V A + G++D DLL D+F F P + K+ F+ F+L+ AFP+ + +D+RVD+ +P RVW+T R TH G L +G T KPT +V+ PE S TF EGK TGG++MD GN++ LG GI +A+G P+ Sbjct: 19 PIPAEKLIALAQKVFATNSGVEDPDLLADNFRFEFPVVS-LAKKDFVKAVSGFNLKDAFPNMESHPYDWRVDKYEPNRVWWTVRNTATHTGPLRFFGATYKPTGKVVLGAPECLSYTFNEEGKVTSFTGGYIMDRRVGNTNKLGAMFGILSAIGAPV 174
BLAST of NO20G02390 vs. NCBI_GenBank
Match: CEM20118.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 122.9 bits (307), Expect = 3.500e-24 Identity = 66/162 (40.74%), Postives = 87/162 (53.70%), Query Frame = 0 Query: 164 PAATLIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPLSTFSVQP 326 P +I K+ V + GL + DLL DDF F+ P GP+ K ++ F+L A PDF F VD ++P RVW+ R GTH G + +P +V+D P+A S TF +GK K TGG+ D T GN+ GLGG G+ AVGHPL QP Sbjct: 35 PPDKMIEKAKDFVRANNGLSNPDLLADDFQFVFPVVGPLTKEQYLSAVGNFNLLDAIPDFQQNTFGFVVDPLEPNRVWWMARARGTHTG---LLAGVYEPEGKVIDSVPQAISATFNEDGKVTKWTGGYPADRTAGNTGGLGGIFGVFYAVGHPLPFREAQP 193
BLAST of NO20G02390 vs. NCBI_GenBank
Match: XP_023328693.1 (uncharacterized protein LOC111701581 [Eurytemora affinis]) HSP 1 Score: 120.6 bits (301), Expect = 1.800e-23 Identity = 66/167 (39.52%), Postives = 93/167 (55.69%), Query Frame = 0 Query: 162 PPPAATLIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDGPVGKRLFIDGSLAFDLRGAF---PDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPLSTFSVQP 326 P + LI CK+V+ G +DLL DDF F+ P GP+ K+ F++ +F + + P++ +F VD ++P RVWF +R H GDL + IKPT + + PP+ S +F EG+C K TGG+ +D T GN+ GLGG GI AVG PL QP Sbjct: 83 PIKESDLINKCKDVIKAQFGCDKQDLLADDFLFVFPVVGPLSKKDFVEIFSSFKMSSSLTGSPNY----FNFSVDPMEPNRVWFFSRSVLKHTGDLIFGHQVIKPTGKTIVSPPQVLSMSFNEEGQCYKFTGGYSVDRTVGNTGGLGGLFGILQAVGSPLPFPEGQP 245
BLAST of NO20G02390 vs. NCBI_GenBank
Match: XP_003055318.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH60570.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 119.0 bits (297), Expect = 5.100e-23 Identity = 63/158 (39.87%), Postives = 88/158 (55.70%), Query Frame = 0 Query: 168 LIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPLSTFSVQP 326 LIA K ++A + G ++ LL DF F+ P GP+ K F++ F + FPD F + FRVD +P RVW+ TR G + GDL G +K T + ++ PP+A S F G+C +LT G+VMD GN+ GLGG GI +G+ L QP Sbjct: 112 LIAKTKAILAANNGAENPALLASDFQFVAPVVGPLPKERFLEAFAGFKIEEGFPDAKFNYYAFRVDPFEPSRVWYDTRFVGVNSGDL--VGGNLKATGKRVEAPPQACSMRFNARGECEQLTVGYVMDKQIGNTGGLGGVFGILYTIGYGLPFPEAQP 267
BLAST of NO20G02390 vs. NCBI_GenBank
Match: GAX79515.1 (hypothetical protein CEUSTIGMA_g6956.t1 [Chlamydomonas eustigma]) HSP 1 Score: 117.5 bits (293), Expect = 1.500e-22 Identity = 71/178 (39.89%), Postives = 97/178 (54.49%), Query Frame = 0 Query: 168 LIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPLSTFSVQP--PLRALLETVKSKTSSLLP 344 LI KNV GL+ D L DDF F P + K+ ++ +F L+ AFPD + A+DFRVD +P RVWFT+R TH+G L + PT +++ PE S TF EGK TGG++MD GN+ GLG GI AA+G P+ +QP P+ L+ + T+ L P Sbjct: 60 LIEKAKNVFKVGTGLESPDDLADDFKFEFPIIS-LPKKEYLAAVSSFRLKEAFPDINPHAYDFRVDPFEPNRVWFTSRVTATHKGALKVGDMKFDPTNKLVFGAPECQSYTFNAEGKVTSFTGGYIMDRRVGNTKGLGAVFGIIAAIGGPV----LQPGSPILTFLQLQGAVTAFLKP 232
BLAST of NO20G02390 vs. NCBI_GenBank
Match: CEL98299.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 117.1 bits (292), Expect = 1.900e-22 Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 0 Query: 162 PPPAATLIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPT--LRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPL 319 P P A L+ + + GL D +L DDF FI PF GP+ K F+ F+L AFPD VD +P RVW+ + GT+ G L + P+ ++VL+ PP+ +S TF EGK +K TGG+ +D T GN+ GLGG G A+G PL Sbjct: 35 PIPPAELLELARRFILTKSGLDDPSILADDFQFIFPFVGPLSKTEFLAAVSTFNLEEAFPDLKQNTRMMSVDAFEPNRVWYFVQPEGTNLGPLNVLNVPTIPSTGIKVLN-PPQVHSITFNEEGKIVKFTGGYPVDRTIGNTGGLGGIFGYLKAIGRPL 192 The following BLAST results are available for this feature:
BLAST of NO20G02390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G02390 ID=NO20G02390|Name=NO20G02390|organism=Nannochloropsis oceanica|type=gene|length=3980bpback to top protein sequence of NO20G02390.1 >NO20G02390.1-protein ID=NO20G02390.1-protein|Name=NO20G02390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=614bpback to top Synonyms
Publications
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