NO20G02390, NO20G02390 (gene) Nannochloropsis oceanica

Overview
NameNO20G02390
Unique NameNO20G02390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3980
Alignment locationchr20:721078..725057 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:721078..725057 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO20G02390 vs. NCBI_GenBank
Match: XP_002179040.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49738.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 164.1 bits (414), Expect = 1.400e-36
Identity = 132/390 (33.85%), Postives = 172/390 (44.10%), Query Frame = 0
Query:  163 PPAATLIAWCKNVVAHDMGLKDEDLLDD-DFYFIGP-FDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPLSTFSVQPPLRALLETVKSKTSSLLPXXXXXXXXXXXXXXXXXXXXXXXMPVLPSETTLTEAELLSLASSFLSSSPSSPLPPSLLPSSIPSLYWLDCDWHGAFSDITILTYNLRLDRHQPATVWADVRRRGTHTGSKSFGGKEGSLFAIPPASGLPYVSAPEAVSLTFNDKKQLVRMTAAAVLDREEGNTGGLXXXXXXXYALNRPSLPLLTRPLRFHSLREWKTSILKSFAG 551
            P  + L+   K V+A D+GL+D  LLDD +F  I P  D P+GK  +I     FDLRG FPD D+RAHDFR+DE  P  V  T R  GT RG+L +    + PT  V+  PPEA S TF  +GK  KL  GF MD   GN+ G  G    A   G P S + + P L  +      K     P                         VL S   L +  LLS   ++     S+P    +   S  S Y  +      F++I     + R+D + P  VW DV+                     P A G  Y  AP++ S TF+D+    R+TA  VLD   GN GGL       YALN     LLTRPL   ++  ++  IL    G
Sbjct:   81 PSPSGLVRRTKLVLATDLGLQDPSLLDDQEFKCISPGLDQPLGKTDYIAAGRFFDLRGTFPDLDYRAHDFRIDETDPKTVRLTCRVTGTMRGELRLRTANLPPTNIVMFCPPEAVSMTFNDQGKVTKLCMGFCMDRQVGNTQGTTGVQAAATIAGQPPSNWELYPGLSVV------KRFFGRPVTPIVENNAILAPFPETVMVQLAKGVLGSNMGLEDPTLLSNDFAY-----STPFIAPVSKFSFLSNYAAE-----EFANIDPSLSHFRIDPYNPTRVWVDVK---------------------PSAPG--YEGAPQSYSFTFDDEGFCTRVTARYVLDPSIGNGGGLGGPDGYKYALNDAPSDLLTRPLP-EAVGRFRKKILSPITG 430          
BLAST of NO20G02390 vs. NCBI_GenBank
Match: GAX23391.1 (hypothetical protein FisN_15Lh109 [Fistulifera solaris])

HSP 1 Score: 149.4 bits (376), Expect = 3.500e-32
Identity = 122/378 (32.28%), Postives = 166/378 (43.92%), Query Frame = 0
Query:  168 LIAWCKNVVAHDMGLKDEDLLDDD-FYFIGP-FDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPE-GKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPLSTFSVQPPLRALLETVKSKTSSLLPXXXXXXXXXXXXXXXXXXXXXXXMPVLPSETTLTEAELLSLASSFLSSSPSSPLPPSLLPSSI----PSL------YWLDCDWHGAFSDITILTYNLRLDRHQPATVWADVRRRGTHTGSKSFGGKEGSLFAIPPASGLPYVSAPEAVSLTFNDKKQLVRMTAAAVLDREEGNTGGLXXXXXXXYALNRPSLPLLTRPL 533
            L+   K V+  D+GL D  LLDD+ F ++ P  D P+ K  ++     FDLR AFPD ++RAHDFR+D      V  T R  GT RG L +    + PT + +  PPE +S TF  E GK +KL  GF MD   GN+ G  G +  A   G P+S + + PP   +L+    +    LP                         V        E  ++ LA   + S+ +S + PSLL  S     PSL       +L+      F D+     N R+D + P  VW D++  GT                        Y   P+A+S TF+      R+TA AVLD   GN GGL       YA  + S PL TRPL
Sbjct:   77 LVLQAKRVLNSDLGLLDPSLLDDEKFQWVSPTVDKPLDKTDYLAAGRFFDLRAAFPDLNYRAHDFRIDIDDDATVRCTCRITGTMRGALRLRDVILSPTGKTMICPPEGFSMTFDLESGKLVKLCTGFAMDRLVGNTQGTTGVVAAAITGGQPISDWDIYPP-ATVLKRFFGRPVKPLP------------------------EVSNFLAPFPETVMIQLAKGIIGSNMAS-VDPSLLAQSFTYMTPSLGPIGKEEFLENFAKEEFQDVDPRISNYRVDPYDPERVWVDLKPVGT-----------------------GYQGTPQAMSFTFDGDGFCTRITAGAVLDPTIGNGGGLGGPEGLKYARGQASNPLTTRPL 405          
BLAST of NO20G02390 vs. NCBI_GenBank
Match: XP_002507412.1 (predicted protein [Micromonas commoda] >ACO68670.1 predicted protein [Micromonas commoda])

HSP 1 Score: 128.3 bits (321), Expect = 8.400e-26
Identity = 67/164 (40.85%), Postives = 93/164 (56.71%), Query Frame = 0
Query:  162 PPPAATLIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPLSTFSVQP 326
            P P A LIA CK ++A + G +D  LL  DF F+ P  GP+ K  F+    +F +   FPD  F  + FRVD  +P RVW+  R  GT+ G  P+ G T+  T + ++ PP++ S  F   G+C +LT G+VMD   GN+ GLGG  GI  A+G+ L     QP
Sbjct:   88 PIPPADLIAKCKLILAKNNGGEDPSLLASDFKFVAPVVGPLEKERFLAAFQSFKIDEGFPDAKFNYYHFRVDPFEPSRVWYDARFVGTNTG--PLIGGTLPATNKKVESPPQSCSMRFNERGECTQLTVGYVMDKQLGNTGGLGGVYGILYAIGYGLPFPEAQP 249          
BLAST of NO20G02390 vs. NCBI_GenBank
Match: GAQ79407.1 (hypothetical protein KFL_000300050 [Klebsormidium nitens])

HSP 1 Score: 128.3 bits (321), Expect = 8.400e-26
Identity = 71/158 (44.94%), Postives = 90/158 (56.96%), Query Frame = 0
Query:  168 LIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPLSTFSVQP 326
            LI   KNV+A + G+ D  LL DDF F  P    +GK+ F+    +F L+ AFPD +   ++F VD  +P RVWF TR   TH G L    +TIKPT + ++  PE  S TF  EGK  KLT G+V D   GN+ GLG   GI  AVGHPL     +P
Sbjct:   23 LIELTKNVLAKNQGVDDPLLLADDFKFAAPII-YLGKKEFLKAFASFQLKVAFPDVEANFYNFFVDPYEPNRVWFFTRTRATHTGPLKFGARTIKPTYKRVEAAPEVSSMTFNEEGKVTKLTVGYVADRRVGNTGGLGALFGILYAVGHPLPFPEARP 179          
BLAST of NO20G02390 vs. NCBI_GenBank
Match: XP_005643580.1 (amidase signature enzyme [Coccomyxa subellipsoidea C-169] >EIE19036.1 amidase signature enzyme [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 126.7 bits (317), Expect = 2.500e-25
Identity = 66/157 (42.04%), Postives = 93/157 (59.24%), Query Frame = 0
Query:  162 PPPAATLIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPL 319
            P PA  LIA  + V A + G++D DLL D+F F  P    + K+ F+     F+L+ AFP+ +   +D+RVD+ +P RVW+T R   TH G L  +G T KPT +V+   PE  S TF  EGK    TGG++MD   GN++ LG   GI +A+G P+
Sbjct:   19 PIPAEKLIALAQKVFATNSGVEDPDLLADNFRFEFPVVS-LAKKDFVKAVSGFNLKDAFPNMESHPYDWRVDKYEPNRVWWTVRNTATHTGPLRFFGATYKPTGKVVLGAPECLSYTFNEEGKVTSFTGGYIMDRRVGNTNKLGAMFGILSAIGAPV 174          
BLAST of NO20G02390 vs. NCBI_GenBank
Match: CEM20118.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 122.9 bits (307), Expect = 3.500e-24
Identity = 66/162 (40.74%), Postives = 87/162 (53.70%), Query Frame = 0
Query:  164 PAATLIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPLSTFSVQP 326
            P   +I   K+ V  + GL + DLL DDF F+ P  GP+ K  ++     F+L  A PDF      F VD ++P RVW+  R  GTH G   +     +P  +V+D  P+A S TF  +GK  K TGG+  D T GN+ GLGG  G+  AVGHPL     QP
Sbjct:   35 PPDKMIEKAKDFVRANNGLSNPDLLADDFQFVFPVVGPLTKEQYLSAVGNFNLLDAIPDFQQNTFGFVVDPLEPNRVWWMARARGTHTG---LLAGVYEPEGKVIDSVPQAISATFNEDGKVTKWTGGYPADRTAGNTGGLGGIFGVFYAVGHPLPFREAQP 193          
BLAST of NO20G02390 vs. NCBI_GenBank
Match: XP_023328693.1 (uncharacterized protein LOC111701581 [Eurytemora affinis])

HSP 1 Score: 120.6 bits (301), Expect = 1.800e-23
Identity = 66/167 (39.52%), Postives = 93/167 (55.69%), Query Frame = 0
Query:  162 PPPAATLIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDGPVGKRLFIDGSLAFDLRGAF---PDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPLSTFSVQP 326
            P   + LI  CK+V+    G   +DLL DDF F+ P  GP+ K+ F++   +F +  +    P++     +F VD ++P RVWF +R    H GDL    + IKPT + +  PP+  S +F  EG+C K TGG+ +D T GN+ GLGG  GI  AVG PL     QP
Sbjct:   83 PIKESDLINKCKDVIKAQFGCDKQDLLADDFLFVFPVVGPLSKKDFVEIFSSFKMSSSLTGSPNY----FNFSVDPMEPNRVWFFSRSVLKHTGDLIFGHQVIKPTGKTIVSPPQVLSMSFNEEGQCYKFTGGYSVDRTVGNTGGLGGLFGILQAVGSPLPFPEGQP 245          
BLAST of NO20G02390 vs. NCBI_GenBank
Match: XP_003055318.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH60570.1 predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 119.0 bits (297), Expect = 5.100e-23
Identity = 63/158 (39.87%), Postives = 88/158 (55.70%), Query Frame = 0
Query:  168 LIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPLSTFSVQP 326
            LIA  K ++A + G ++  LL  DF F+ P  GP+ K  F++    F +   FPD  F  + FRVD  +P RVW+ TR  G + GDL   G  +K T + ++ PP+A S  F   G+C +LT G+VMD   GN+ GLGG  GI   +G+ L     QP
Sbjct:  112 LIAKTKAILAANNGAENPALLASDFQFVAPVVGPLPKERFLEAFAGFKIEEGFPDAKFNYYAFRVDPFEPSRVWYDTRFVGVNSGDL--VGGNLKATGKRVEAPPQACSMRFNARGECEQLTVGYVMDKQIGNTGGLGGVFGILYTIGYGLPFPEAQP 267          
BLAST of NO20G02390 vs. NCBI_GenBank
Match: GAX79515.1 (hypothetical protein CEUSTIGMA_g6956.t1 [Chlamydomonas eustigma])

HSP 1 Score: 117.5 bits (293), Expect = 1.500e-22
Identity = 71/178 (39.89%), Postives = 97/178 (54.49%), Query Frame = 0
Query:  168 LIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPLSTFSVQP--PLRALLETVKSKTSSLLP 344
            LI   KNV     GL+  D L DDF F  P    + K+ ++    +F L+ AFPD +  A+DFRVD  +P RVWFT+R   TH+G L +      PT +++   PE  S TF  EGK    TGG++MD   GN+ GLG   GI AA+G P+    +QP  P+   L+   + T+ L P
Sbjct:   60 LIEKAKNVFKVGTGLESPDDLADDFKFEFPIIS-LPKKEYLAAVSSFRLKEAFPDINPHAYDFRVDPFEPNRVWFTSRVTATHKGALKVGDMKFDPTNKLVFGAPECQSYTFNAEGKVTSFTGGYIMDRRVGNTKGLGAVFGIIAAIGGPV----LQPGSPILTFLQLQGAVTAFLKP 232          
BLAST of NO20G02390 vs. NCBI_GenBank
Match: CEL98299.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 117.1 bits (292), Expect = 1.900e-22
Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 0
Query:  162 PPPAATLIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDGPVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTHRGDLPMYGKTIKPT--LRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGNSSGLGGPLGIAAAVGHPL 319
            P P A L+   +  +    GL D  +L DDF FI PF GP+ K  F+     F+L  AFPD         VD  +P RVW+  +  GT+ G L +      P+  ++VL+ PP+ +S TF  EGK +K TGG+ +D T GN+ GLGG  G   A+G PL
Sbjct:   35 PIPPAELLELARRFILTKSGLDDPSILADDFQFIFPFVGPLSKTEFLAAVSTFNLEEAFPDLKQNTRMMSVDAFEPNRVWYFVQPEGTNLGPLNVLNVPTIPSTGIKVLN-PPQVHSITFNEEGKIVKFTGGYPVDRTIGNTGGLGGIFGYLKAIGRPL 192          
The following BLAST results are available for this feature:
BLAST of NO20G02390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002179040.11.400e-3633.85predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX23391.13.500e-3232.28hypothetical protein FisN_15Lh109 [Fistulifera sol... [more]
XP_002507412.18.400e-2640.85predicted protein [Micromonas commoda] >ACO68670.1... [more]
GAQ79407.18.400e-2644.94hypothetical protein KFL_000300050 [Klebsormidium ... [more]
XP_005643580.12.500e-2542.04amidase signature enzyme [Coccomyxa subellipsoidea... [more]
CEM20118.13.500e-2440.74unnamed protein product [Vitrella brassicaformis C... [more]
XP_023328693.11.800e-2339.52uncharacterized protein LOC111701581 [Eurytemora a... [more]
XP_003055318.15.100e-2339.87predicted protein [Micromonas pusilla CCMP1545] >E... [more]
GAX79515.11.500e-2239.89hypothetical protein CEUSTIGMA_g6956.t1 [Chlamydom... [more]
CEL98299.11.900e-2239.62unnamed protein product [Vitrella brassicaformis C... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G02390.1NO20G02390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|567166gene_6467Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100670g1gene8443Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G02390.1NO20G02390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G02390 ID=NO20G02390|Name=NO20G02390|organism=Nannochloropsis oceanica|type=gene|length=3980bp
CTTGGCGATTCCTTTCTTCGTTTCACCGCCCCCACAGTCTCTATGCCTTC
ACGCTACGTACACTACGCGCACTTAATGAGAGGAAAAGAAGCATTGAATA
GCGTAGATACAGTCTCAAATGTGCCGCTGGCCGAGTAGGAGCGAGATGGG
CACACGATAAGGCTGGCACTGCCAAGTCATTCCGACACGCACCAATCTTC
CCCCTTAACCACTTCATACATTCCTCGGCATCATTAGAAAACACAACACC
GGAGCCCATCAAGAGCCCTACTCATCTTACATGGAGCCGGACGCGGCCAT
GACCAAGATAGCGGCATCTCCCGTTTCGACCTCCTCTCCACCCCCGTCCT
GTTTCGCTTCCCCAGCGCCCGGCAAGGACAACGTAGCCTCCCCAATCAAG
ACTGGAGCAGGACCAGCATCGACCAGCTCCACCGCCAAGGGAAAGAAAAG
gtatgcgtcattgtagggatcgcggaggaaagaaggagcaaacacagggt
attgacacttgctaccctcctacccctcctaccgtcccaccctcctcttt
cccttcctcaagCCCGACGAAGAAGCCCCCCCCAGTCAAGATGGACATCT
CCCCTGTCCCTTCAACCCGCCCTTCCCCGTCACCCTCCTTCTCCTCCTCC
ATATCTACCACATCCGCGACCGCCGCCATCCATACCCCTCCTGTAGCTTC
CTCCCCCTCCTCCCCCTCCTCCTCGGCAGTCGCTCTCCCAATAAATCACC
GTGCTCCTTCCTCCTCGCCTTCCCCCAAGACACCCGCCCCTTCTTCCATC
GCCACCTCCATGTCCGCCACTCCGCTTTCTCCCTCCTCCTCTCCCTCCCA
CTCCCCCTCCTCCTCCATCCTCCAACCCCCTCCTGCCGCCACGCTCATCG
CTTGGTGCAAGAATGTGGTGGCTCATGATATGGGCCTCAAGGACGAAGAC
CTCTTGGATGACGACTTTTACTTCATTGGGCCGTTTGACGGgtgagagcc
cgtccttttttccctaactccctccctccctcctttccactttcacatgc
ctccgaactaaacccctctctcctccacagGCCCGTCGGAAAGCGCCTCT
TCATCGACGGGTCCCTGGCATTCGACCTGCGAGGAGCATTCCCAGATTTC
GATTTCAGGGCTCATGACTTTCGGGTGGACGAGgtaggtagccagatgcc
ccttcctccctccttcccttctctccctccttccctccctccttcccttc
cttcctccctcctttcatattaaatgtcagaaacttgattctatccctcc
ctctctccctccctcactcccttcattctccagGTGCAGCCCTTCCGGGT
ATGGTTCACGACGCGGAAGGCGGGCACCCACCGAGGAGACTTGCCGATGT
ATGGCAAGgtgaggagagggagggagggagggagggagggagggagggag
ggagggagggagggagggagggagggaggaaaggatatgagttcccaggg
ttgaacctgtaggaaggcagagagggaaagagaaagggagaaggggatca
gttcaacagacccaccattcctccctccctccctcccttcctcccttccc
agACCATCAAACCCACCCTCCGGGTACTTGATTTCCCTCCCGAAGCCTAC
TCCTGCACCTTTACACCGGAGGGGAAGTGCATTAAGCTGACAGGAGGTTT
CGTCATGGACGCTACGCGAGGAAACAGTTCTGGCCTTGGCGgtgcgtccc
tccctccctccctccctccctccctctctcccgccttccttcccacatac
caatcacccctccctccctccctccctccctccctccctccctcctccag
GCCCTCTGGGCATCGCGGCGGCCGTGGGTCATCCGCTGTCCACCTTCTCG
GTCCAACCTCCCCTCCGAGCCCTGCTGGAGACGGTGAAAAGCAAGACATC
ATCCCTCCTTCCCGCCCTCCCTCCCTCCCTTTCCGCCCTGTGGGGTGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGATGCCAGTGTTGCCGAGT
GAGACGACTTTGACAGAGgtgagggaaagagggacggagggacggaggga
gggagggagggatggaaggagggagggagggagaggtgattggtacatgg
gatgtatattgagggagggggggagggagggagggaaagcagggcagccg
ttctgttgcgtggtaaccccgtcgacctcctcctttttctctcatcctgc
tccacctccctccctccttcccttcccccccccccttcacctcgcagGCG
GAGCTCCTCTCCCTCGCATCCTCTTTCCTCTCTTCCTCCCCTTCCTCCCC
CCTCCCTCCCTCCCTCCTTCCTTCCTCTATACCGAGCCTCTACTGGgtaa
gcggtggataggaaaggaggaatacctccagcggcagCTGGACTGTGACT
GGCACGGCGCCTTTTCCGACATCAgtacgtgccctccctccctccctccc
tccctccctccctccctccctccctccctccctccctccctttcctcgtc
tcgacgaagccaggcacatgaacataaatgcatttcaaatcgatcattct
ccgatccctctctcccttcctccatctccttcctcctccttccctccctc
cctcttacagCCATCCTCACCTATAACCTGCGTCTCGACCGTCATCAGCC
GGCCACCGTATGGGCCGACGTCCGCCGAAGGGGGACTCACACGGGCTCCA
AGAGCTTCGGAGGAAAGGAGGGGAGgtaaggaagcaaggaagggagggag
ggagggaaagaggaagggagagagagagggagggaggaaagggagggata
agacgataaaggactgcgggtggcttcgccttcctaacgcaccctccctc
cctccctccctccctccctccctccctccctccctccctcccccccagTT
TATTCGCCATCCCTCCCGCCTCTGGTCTTCCCTATGTTTCTGCACCCGAG
GCCGTTTCCCTCACCTTCAATGACAAAAAGCAGCTAGTGCGgtacgtccc
tttctcccgtcctcctcactcgcaccccttcttcctcaatccctctcttc
ctccctccctccctccctcccttccgtcctcatcactcatccctcctctc
cttccctttcttcctccttccctccctccctccctccctccctccctccc
ttcctccctctcttccctcagGATGACGGCAGCAGCAGTCCTGGATCGGG
AAGAGGGAAACACGGGCGGTCTCGGAGGGATTTATGgtaagcccttcact
ccctcccgctctccttctctctctccctcctttctaccctctctccctcc
ccccttctccacctacgggaagcccctccctccctccctccctccctccc
tccctccctccctccctccctccaacccatcccaccacgccctcaaccga
ttcatcaacgcgacgttctcatcaattcccccccccttccccccctccct
cccccccttcctccttccagGCGCCTACTACGCCCTCAATCGCCCTTCCC
TCCCTCTCTTGACGCGCCCCCTCCGCTTCCACTCCCTAAGAGAATGGAAA
ACGTCCATTCTCAAGAGTTTCGCCGGTCCTGCCCTGGCTAAGgtaagctc
cctccctccctccctccctccctccctccctccctccctcccttccttcc
ttccttccttcttgtctttcaccctcgctcccttcattctcccctccctc
cctccctccctccttccttccctccctccctccctccctccctctcaccc
cagCTTCCTATTGTGAAACGTTACGCCTCTTCCTCCTTCTTCTCTCCTTC
CAAGGTCGCCCCCTCCTCCTCCTCCTCCTCCTCCTCTACTCTCTCACATA
CGGGAGAGAAGAAGAGGAAGGCGGAGGGGGAGGGGGAGGGCTCACCCTCA
AGTCAAAAAATGGCACTATCATCCGAGTAG
back to top

protein sequence of NO20G02390.1

>NO20G02390.1-protein ID=NO20G02390.1-protein|Name=NO20G02390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=614bp
MEPDAAMTKIAASPVSTSSPPPSCFASPAPGKDNVASPIKTGAGPASTSS
TAKGKKSPTKKPPPVKMDISPVPSTRPSPSPSFSSSISTTSATAAIHTPP
VASSPSSPSSSAVALPINHRAPSSSPSPKTPAPSSIATSMSATPLSPSSS
PSHSPSSSILQPPPAATLIAWCKNVVAHDMGLKDEDLLDDDFYFIGPFDG
PVGKRLFIDGSLAFDLRGAFPDFDFRAHDFRVDEVQPFRVWFTTRKAGTH
RGDLPMYGKTIKPTLRVLDFPPEAYSCTFTPEGKCIKLTGGFVMDATRGN
SSGLGGPLGIAAAVGHPLSTFSVQPPLRALLETVKSKTSSLLPALPPSLS
ALWGEGGREGGREGGKMPVLPSETTLTEAELLSLASSFLSSSPSSPLPPS
LLPSSIPSLYWLDCDWHGAFSDITILTYNLRLDRHQPATVWADVRRRGTH
TGSKSFGGKEGSLFAIPPASGLPYVSAPEAVSLTFNDKKQLVRMTAAAVL
DREEGNTGGLGGIYGAYYALNRPSLPLLTRPLRFHSLREWKTSILKSFAG
PALAKLPIVKRYASSSFFSPSKVAPSSSSSSSSTLSHTGEKKRKAEGEGE
GSPSSQKMALSSE*
back to top
Synonyms
Publications