NO20G02360, NO20G02360 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G02360 vs. NCBI_GenBank
Match: XP_005854062.1 (glycosyl group 2 family protein, partial [Nannochloropsis gaditana CCMP526] >EKU22298.1 glycosyl group 2 family protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 624.8 bits (1610), Expect = 2.900e-175 Identity = 291/426 (68.31%), Postives = 352/426 (82.63%), Query Frame = 0 Query: 26 ILGILACLLLGFSDAAGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLRAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYDVPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNPRTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVERDYAVYMLSRCYLALDDVANARKYGELSASISNRAEPLYDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFEQATLSRHIYPTQPTLVLEAGLSFLNNVHAPQHLRNYFYKREWGSHTVQYLETNMSYHHYDATHAKTFWQFILHPTSSTASDNTTDVDNSCPLS 452 + G + CL + NTS CLAMI+KNEGPILPRLFDS+RGFVSEYCVMDTGSTDDTVDVLR+ID+PG++LHGPFINFAQARN MI++CR++M SCDYF+LLDADM+L+V P W+W+ +D +DVYNLIQ S VEYENVR+IRRTAD+IKV+GATHEYYDVPD+Y+R LI KDL+YI+DVGDGKAKGDK +RDE LLRQ+L DP+NPRT+FYLANTL+DM RYA+AIP YEQRS MDNGWWVERDYAVYML +CYL L+D++NARKYGEL+A IS RAEPLYDL+YYLHH E Y LAWYYYTLAS IPKP V + LFIV DIYAFWLDFE+ATLSRHI+P QP L L AG+SFLNN++APQ+LR YFY+ W ++ L + ++YHHY A+ FW +L+ ++ T +T ++ +S Sbjct: 7 VWGTIFCLQESNAIKRDTNTSVCLAMIIKNEGPILPRLFDSVRGFVSEYCVMDTGSTDDTVDVLRSIDVPGQVLHGPFINFAQARNLMIDECRKLMKSCDYFLLLDADMILKVHPEWSWNIIDDRDVYNLIQESKVEYENVRLIRRTADKIKVIGATHEYYDVPDEYSRELISKDLIYIEDVGDGKAKGDKFERDEYLLRQDLERDPSNPRTVFYLANTLKDMKRYAEAIPLYEQRSFMDNGWWVERDYAVYMLCKCYLGLEDLSNARKYGELAARISKRAEPLYDLVYYLHHNELYTLAWYYYTLASQIPKPAVKETLFIVGDIYAFWLDFEKATLSRHIFPDQPILALTAGVSFLNNMYAPQYLREYFYREAWIESIIKCLRSTVTYHHYHASQPDIFWHSVLNNSAETECRYSTSGESDRRIS 432
BLAST of NO20G02360 vs. NCBI_GenBank
Match: EWM20048.1 (glycosyl transferase [Nannochloropsis gaditana]) HSP 1 Score: 308.1 bits (788), Expect = 6.000e-80 Identity = 142/221 (64.25%), Postives = 174/221 (78.73%), Query Frame = 0 Query: 231 DPNNPRTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVERDYAVYMLSRCYLALDDVANARKYGELSASISNRAEPLYDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFEQATLSRHIYPTQPTLVLEAGLSFLNNVHAPQHLRNYFYKREWGSHTVQYLETNMSYHHYDATHAKTFWQFILHPTSSTASDNTTDVDNSCPLS 452 DP+NPRT+FYLANTL+DM RYA+AIP YEQRS MDNGWWVERDYAVYML +CYL L+D++NARKYGEL+A IS RAEPLYDL+YYLHH E Y LAWYYYTLAS IPKP V + LFIV DIYAFWLDFE+ATLSRHI+P QP L L AG+SFLNN++APQ+LR YFY+ W ++ L + ++YHHY A+ FW +L+ ++ T +T ++ +S Sbjct: 11 DPSNPRTVFYLANTLKDMKRYAEAIPLYEQRSLMDNGWWVERDYAVYMLCKCYLGLEDLSNARKYGELAARISKRAEPLYDLVYYLHHNELYTLAWYYYTLASQIPKPAVKETLFIVGDIYAFWLDFEKATLSRHIFPDQPILALTAGVSFLNNMYAPQYLREYFYREAWVESIIKCLRSTVTYHHYHASQPDIFWHSVLNNSAETECRYSTSGESDRRIS 231
BLAST of NO20G02360 vs. NCBI_GenBank
Match: EWM20169.1 (glycosyl group 2, partial [Nannochloropsis gaditana]) HSP 1 Score: 181.8 bits (460), Expect = 6.500e-42 Identity = 83/117 (70.94%), Postives = 100/117 (85.47%), Query Frame = 0 Query: 24 LAILGILACLLLGFSDAAGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLRAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDP 141 + + G + CL + NTS CLAMI+KNEGPILPRLFDS+RGFVSEYCVMDTGSTDDTVDVLR+ID+PG++LHGPFINFAQARN MI++CR++M SCDYF+LLDADM+L+V P Sbjct: 12 VCVWGSIFCLQESNAIKRDTNTSVCLAMIIKNEGPILPRLFDSVRGFVSEYCVMDTGSTDDTVDVLRSIDVPGQVLHGPFINFAQARNLMIDECRKLMKSCDYFLLLDADMILKVHP 128
BLAST of NO20G02360 vs. NCBI_GenBank
Match: EWM20245.1 (glycosyl group 2, partial [Nannochloropsis gaditana]) HSP 1 Score: 180.3 bits (456), Expect = 1.900e-41 Identity = 82/115 (71.30%), Postives = 99/115 (86.09%), Query Frame = 0 Query: 26 ILGILACLLLGFSDAAGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLRAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDP 141 + G + CL + NTS CLAMI+KNEGPILPRLFDS+RGFVSEYCVMDTGSTDDTVDVL++ID+PG++LHGPFINFAQARN MI++CR++M SCDYF+LLDADM+L+V P Sbjct: 14 VWGSIFCLQESNAIKRDTNTSVCLAMIIKNEGPILPRLFDSVRGFVSEYCVMDTGSTDDTVDVLKSIDVPGQVLHGPFINFAQARNLMIDECRKLMKSCDYFLLLDADMILKVHP 128
BLAST of NO20G02360 vs. NCBI_GenBank
Match: YP_009174077.1 (putative glycosyl transferase [Yellowstone lake mimivirus] >BAT21964.1 putative glycosyl transferase [Yellowstone lake mimivirus]) HSP 1 Score: 176.8 bits (447), Expect = 2.100e-40 Identity = 110/323 (34.06%), Postives = 174/323 (53.87%), Query Frame = 0 Query: 44 NTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLRAI----DMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQIS-SVEYENVRIIRRTADRIKVVGATHEYYDVPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNPRTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVERDYAVYMLSRCYLALDDVANARKYG-ELSASISNRAEPLYDLIYYLHHREQYALAWYYYTLASGI--PKPPVDQALFIVLDIYAFWLDFE 359 N + CL MI+KNE I+ RL S+ + +C+ DTGSTD+T +++ ++ GKI+ PF NF RN + C + DY +LLDADM+L + +N + L D + ++Q S Y+N+RI++ K VG THEY + P + I K ++I+D GDG K DK +RD LL +A++P N R FYLAN+ D+G+ DAI Y++R + GW E Y+ Y + CY + +++A Y E + R E L+++++Y + LA Y + I K +D LF+ +Y++ + +E Sbjct: 3 NPTLCLNMIVKNESKIIHRLLTSVLPIIDAFCICDTGSTDNTCEIITEFFEKHNIKGKIIKEPFKNFEYNRNFSLLNC---IGLTDYVLLLDADMILDI-RNFNKNMLSMSDSFYILQGSDQFYYQNMRIVKNNG-LYKYVGVTHEYINTPSNNRTIGIDKTQLFINDYGDGGCKSDKFERDILLLTNGIAEEPTNVRYHFYLANSYHDLGKNEDAIEMYKKRIAL-GGWNQEVWYSYYRIGLCYNKMKKISDAIYYWLEAYNYLPERLEALHEILHYYRVKGNQKLAIDIYNICKTIFDKKLKIDDYLFLQASVYSYKIYYE 319
BLAST of NO20G02360 vs. NCBI_GenBank
Match: PPD38108.1 (hypothetical protein CTY16_20695 [Methylobacter sp.]) HSP 1 Score: 170.2 bits (430), Expect = 2.000e-38 Identity = 106/326 (32.52%), Postives = 169/326 (51.84%), Query Frame = 0 Query: 43 HNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLR--AIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYDVPDDYTRGLIP-KDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNPRTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVERDYAVYMLSR----CYLALDDVANARKYGELSASISNRAEPLYDLIYYLHHREQYALAWYYYTL-ASGIPKPPVDQALFIVLDIYAFWLDFEQA 361 +N + CL M+++NE ++ R +S + + + ++DTGSTD+T ++++ +D+PG++ H +++F R ++ R Y ++LDADM + V + D Y I+ E ++ VG THEY D P T+ I D + + DG + DK +RD RLL ++L DP N R++FYLA + +D+G+Y DA+ +YEQR+ M+N W ER +A R C D+ A + A +RAEP+Y ++ YL + Y LAW A+G+P PP D LFI +Y + L E A Sbjct: 3 NNKTICLCMMVRNESHVIKRALESAKPHIDYWVIVDTGSTDNTEEIIQQTLLDIPGELHHSKWVDFGHNRTEVVRLAR---NKAAYLLILDADMAVNVYAPFKHKLT--ADAYE-IRYEGDESYTQHMLVAAHHNWHYVGVTHEYIDAP---TKQYIDWMDELTLTHFADGGMRSDKFERDIRLLTEDLQKDPGNARSLFYLAQSYKDLGKYKDALYWYEQRAAMENSWDEERWFAQMQAGRMKLLCNYPWDEAVQALL--KAYAMRPSRAEPIYTVVRYLREQGSYQLAWQLCAFAANGMPLPPRD-ILFIDTPVYRYLLQLEYA 316
BLAST of NO20G02360 vs. NCBI_GenBank
Match: WP_000526207.1 (glycosyl transferase [Bacillus thuringiensis] >ADY21567.1 glycosyl transferase, group 2 family protein [Bacillus thuringiensis serovar finitimus YBT-020] >OTX63306.1 glycosyl transferase [Bacillus thuringiensis serovar finitimus]) HSP 1 Score: 167.9 bits (424), Expect = 9.700e-38 Identity = 112/358 (31.28%), Postives = 175/358 (48.88%), Query Frame = 0 Query: 41 AGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVL----RAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYD-----VPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNP----RTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVER-DYAVYMLSRCYLAL--------------DDVANARKYGELSASIS------------NRAEPLYDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFE 359 AG CL MI+KNE I+ R ++ + V + DTGSTD T +++ + ++PG + H PF NF R+ ++ ++ DY ++LDADM+L VDP ++ L L ++Y R+++ + K VG THEY+D V +DY + + + ++D GDG +K DK +RDERLL Q L+D P R +FYLA T + ++ D+I +Y++R ++ G WVE Y++ + CY L D+ NA+K E +++ RAEPLY L + Q +A Y IP P D LF+ +Y + D+E Sbjct: 9 AGEEKKLCLCMIVKNESRIMERCLNATKSIVDFVSICDTGSTDHTPEIIENWCKENEIPGTVHHEPFKNFGYNRSLAVSLAQKTYPEADYLLILDADMILEVDPNFDKTSLTEDHYLTLQYDIHIKYWLTRLLKASLP-WKSVGVTHEYWDIDRSKVGEDYNTRVARLETLVVNDPGDGGSKADKFERDERLLLQGLSDPETTPDLHIRYLFYLAQTYFHLSQFEDSIKWYKKR--VEAGGWVEEVFYSLLRIGFCYEQLATRSANKQLEVTEVDEKENAKKQEEQYTALAVLYFQKAWEYRPTRAEPLYQLARMYRLKSQNNIALMYALQGKEIPFPKND-LLFVDYHVYDYLFDYE 362
BLAST of NO20G02360 vs. NCBI_GenBank
Match: WP_016717391.1 (glycosyl transferase [Bacillus cereus] >KYQ04691.1 Dolichol-phosphate mannosyltransferase in lipid-linked oligosaccharide synthesis cluster [Bacillus cereus]) HSP 1 Score: 167.5 bits (423), Expect = 1.300e-37 Identity = 110/358 (30.73%), Postives = 177/358 (49.44%), Query Frame = 0 Query: 41 AGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVL----RAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYD-----VPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNP----RTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVER-DYAVYMLSRCYLAL--------------DDVANARKYGELSASIS------------NRAEPLYDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFE 359 AG CL MI+KNE I+ R ++ + V + DTGSTD+T +++ + ++PG + H PF NF R+ ++ ++ DY ++LDADM+L VDP ++ L L ++Y R+++ + K VG THEY+D V ++Y + + + ++D GDG +K DK +RDERLL Q L+D P R +FYLA T + ++ D+I +Y++R ++ G WVE Y++ + CY L D++ NA+ E ++++ RAEPLY L + Q +A Y IP P D LF+ +Y + D+E Sbjct: 9 AGEEKKLCLCMIVKNESRIMERCLNATKSIVDFVSICDTGSTDNTPEIIENWCKENEIPGTVHHEPFKNFGYNRSLAVSLAQKTYPEADYLLILDADMILEVDPNFDKTSLTEDHYLTLQYDVHIKYWLTRLLKASLP-WKSVGVTHEYWDIDRSKVGENYNTRVARLETLVVNDPGDGGSKADKFERDERLLLQGLSDPETTPDLHIRYLFYLAQTYFHLSQFEDSIKWYKKR--VEAGGWVEEVFYSLLRIGFCYEQLANRAANKQHEVTEADEMENAKTQEEQYSALAIFYFQKAWEYRPTRAEPLYQLARMYRLKSQNNIALMYALQGKEIPFPK-DDLLFVDYHVYDYLFDYE 362
BLAST of NO20G02360 vs. NCBI_GenBank
Match: WP_024760579.1 (glycosyl transferase family 2 [Streptomyces exfoliatus]) HSP 1 Score: 167.5 bits (423), Expect = 1.300e-37 Identity = 116/318 (36.48%), Postives = 169/318 (53.14%), Query Frame = 0 Query: 46 SACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLRA--IDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYDVPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNPRTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVERDYAVYMLSRCYLALDDVANARKYGELSASISNRAEPL---YDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFE 359 S CL MI+KNE ++ R S+RG V + + DTGSTD T D++R +PG++ P++NF R+ I + R DY +LLDAD VLR D DL D Y + S+EY R++R + G THEY D+ + + D++ I+D DG ++ DK +RD RLL EL DP+NPRT+FYLA T+RDMGR +A+P YE+R+ M GW E Y+ +L L + A LS + +R E L Y+L+ L +Y A + +++ + D LF+ +Y + L FE Sbjct: 4 SICLCMIVKNESKVIERCLTSVRGLVDTWVITDTGSTDGTQDLIRTALAGIPGELREEPWVNFGHNRSLNIARAR---GRADYLLLLDADHVLRQDGP--LPDLTA-DAYMIRHEGSLEYRIKRLVRGDLP-WRYEGVTHEYLTADRDHVQRNL--DVLSIEDHADGGSRHDKFERDARLLGAELDRDPDNPRTVFYLAQTMRDMGRADEAVPLYERRAAM-GGWGEEVYYS--LLQSGVLQAESGAWPSAMDALSRAWESRPERLEACYELVARLRKMRRYRAA--HAVVSAVLDGRQPDDLLFMQPWVYRYGLLFE 307
BLAST of NO20G02360 vs. NCBI_GenBank
Match: WP_074601286.1 (glycosyl transferase [Bacillus cereus]) HSP 1 Score: 167.5 bits (423), Expect = 1.300e-37 Identity = 111/358 (31.01%), Postives = 175/358 (48.88%), Query Frame = 0 Query: 41 AGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVL----RAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYD-----VPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNP----RTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVER-DYAVYMLSRCYLAL--------------DDVANARKYGELSASIS------------NRAEPLYDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFE 359 AG CL MI+KNE I+ R ++ + V + DTGSTD T +++ + ++PG + H PF NF R+ ++ ++ DY ++LDADM+L VDP ++ L L ++Y R+++ + K VG THEY+D V +DY + + + ++D GDG +K DK +RDERLL Q L+D P R +FYLA T + ++ D+I +Y++R ++ G WVE Y++ + CY L D+ NA+K E +++ RAEPLY L + Q +A Y +P P D LF+ +Y + D+E Sbjct: 9 AGEEKKLCLCMIVKNESRIMERCLNATKSIVDFVSICDTGSTDHTPEIIENWCKENEIPGTVHHEPFKNFGYNRSLAVSLAQKTYPEADYLLILDADMILEVDPNFDKTSLTEDHYLTLQYDIHIKYWLTRLLKASLP-WKSVGVTHEYWDIDRSKVGEDYNTRVARLETLVVNDPGDGGSKADKFERDERLLLQGLSDPETTPDLHIRYLFYLAQTYFHLSQFEDSIKWYKKR--VEAGGWVEEVFYSLLRIGFCYEQLATRSANKQLEVTEADEKENAKKQEEQYTALAVLYFQKAWEYRPTRAEPLYQLARMYRLKSQNNIALMYALQGKEVPFPKND-LLFVDYHVYDYLFDYE 362 The following BLAST results are available for this feature:
BLAST of NO20G02360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G02360 ID=NO20G02360|Name=NO20G02360|organism=Nannochloropsis oceanica|type=gene|length=2944bpback to top protein sequence of NO20G02360.1 >NO20G02360.1-protein ID=NO20G02360.1-protein|Name=NO20G02360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=623bpback to top Synonyms
Publications
|