NO20G02360, NO20G02360 (gene) Nannochloropsis oceanica

Overview
NameNO20G02360
Unique NameNO20G02360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2944
Alignment locationchr20:710659..713602 +

Link to JBrowse

Properties
Property NameValue
DescriptionGlycosyl group 2 family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:710659..713602 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR011990TPR-like_helical_dom
IPR001173Glyco_trans_2-like
Homology
BLAST of NO20G02360 vs. NCBI_GenBank
Match: XP_005854062.1 (glycosyl group 2 family protein, partial [Nannochloropsis gaditana CCMP526] >EKU22298.1 glycosyl group 2 family protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 624.8 bits (1610), Expect = 2.900e-175
Identity = 291/426 (68.31%), Postives = 352/426 (82.63%), Query Frame = 0
Query:   26 ILGILACLLLGFSDAAGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLRAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYDVPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNPRTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVERDYAVYMLSRCYLALDDVANARKYGELSASISNRAEPLYDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFEQATLSRHIYPTQPTLVLEAGLSFLNNVHAPQHLRNYFYKREWGSHTVQYLETNMSYHHYDATHAKTFWQFILHPTSSTASDNTTDVDNSCPLS 452
            + G + CL    +     NTS CLAMI+KNEGPILPRLFDS+RGFVSEYCVMDTGSTDDTVDVLR+ID+PG++LHGPFINFAQARN MI++CR++M SCDYF+LLDADM+L+V P W+W+ +D +DVYNLIQ S VEYENVR+IRRTAD+IKV+GATHEYYDVPD+Y+R LI KDL+YI+DVGDGKAKGDK +RDE LLRQ+L  DP+NPRT+FYLANTL+DM RYA+AIP YEQRS MDNGWWVERDYAVYML +CYL L+D++NARKYGEL+A IS RAEPLYDL+YYLHH E Y LAWYYYTLAS IPKP V + LFIV DIYAFWLDFE+ATLSRHI+P QP L L AG+SFLNN++APQ+LR YFY+  W    ++ L + ++YHHY A+    FW  +L+ ++ T    +T  ++   +S
Sbjct:    7 VWGTIFCLQESNAIKRDTNTSVCLAMIIKNEGPILPRLFDSVRGFVSEYCVMDTGSTDDTVDVLRSIDVPGQVLHGPFINFAQARNLMIDECRKLMKSCDYFLLLDADMILKVHPEWSWNIIDDRDVYNLIQESKVEYENVRLIRRTADKIKVIGATHEYYDVPDEYSRELISKDLIYIEDVGDGKAKGDKFERDEYLLRQDLERDPSNPRTVFYLANTLKDMKRYAEAIPLYEQRSFMDNGWWVERDYAVYMLCKCYLGLEDLSNARKYGELAARISKRAEPLYDLVYYLHHNELYTLAWYYYTLASQIPKPAVKETLFIVGDIYAFWLDFEKATLSRHIFPDQPILALTAGVSFLNNMYAPQYLREYFYREAWIESIIKCLRSTVTYHHYHASQPDIFWHSVLNNSAETECRYSTSGESDRRIS 432          
BLAST of NO20G02360 vs. NCBI_GenBank
Match: EWM20048.1 (glycosyl transferase [Nannochloropsis gaditana])

HSP 1 Score: 308.1 bits (788), Expect = 6.000e-80
Identity = 142/221 (64.25%), Postives = 174/221 (78.73%), Query Frame = 0
Query:  231 DPNNPRTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVERDYAVYMLSRCYLALDDVANARKYGELSASISNRAEPLYDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFEQATLSRHIYPTQPTLVLEAGLSFLNNVHAPQHLRNYFYKREWGSHTVQYLETNMSYHHYDATHAKTFWQFILHPTSSTASDNTTDVDNSCPLS 452
            DP+NPRT+FYLANTL+DM RYA+AIP YEQRS MDNGWWVERDYAVYML +CYL L+D++NARKYGEL+A IS RAEPLYDL+YYLHH E Y LAWYYYTLAS IPKP V + LFIV DIYAFWLDFE+ATLSRHI+P QP L L AG+SFLNN++APQ+LR YFY+  W    ++ L + ++YHHY A+    FW  +L+ ++ T    +T  ++   +S
Sbjct:   11 DPSNPRTVFYLANTLKDMKRYAEAIPLYEQRSLMDNGWWVERDYAVYMLCKCYLGLEDLSNARKYGELAARISKRAEPLYDLVYYLHHNELYTLAWYYYTLASQIPKPAVKETLFIVGDIYAFWLDFEKATLSRHIFPDQPILALTAGVSFLNNMYAPQYLREYFYREAWVESIIKCLRSTVTYHHYHASQPDIFWHSVLNNSAETECRYSTSGESDRRIS 231          
BLAST of NO20G02360 vs. NCBI_GenBank
Match: EWM20169.1 (glycosyl group 2, partial [Nannochloropsis gaditana])

HSP 1 Score: 181.8 bits (460), Expect = 6.500e-42
Identity = 83/117 (70.94%), Postives = 100/117 (85.47%), Query Frame = 0
Query:   24 LAILGILACLLLGFSDAAGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLRAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDP 141
            + + G + CL    +     NTS CLAMI+KNEGPILPRLFDS+RGFVSEYCVMDTGSTDDTVDVLR+ID+PG++LHGPFINFAQARN MI++CR++M SCDYF+LLDADM+L+V P
Sbjct:   12 VCVWGSIFCLQESNAIKRDTNTSVCLAMIIKNEGPILPRLFDSVRGFVSEYCVMDTGSTDDTVDVLRSIDVPGQVLHGPFINFAQARNLMIDECRKLMKSCDYFLLLDADMILKVHP 128          
BLAST of NO20G02360 vs. NCBI_GenBank
Match: EWM20245.1 (glycosyl group 2, partial [Nannochloropsis gaditana])

HSP 1 Score: 180.3 bits (456), Expect = 1.900e-41
Identity = 82/115 (71.30%), Postives = 99/115 (86.09%), Query Frame = 0
Query:   26 ILGILACLLLGFSDAAGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLRAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDP 141
            + G + CL    +     NTS CLAMI+KNEGPILPRLFDS+RGFVSEYCVMDTGSTDDTVDVL++ID+PG++LHGPFINFAQARN MI++CR++M SCDYF+LLDADM+L+V P
Sbjct:   14 VWGSIFCLQESNAIKRDTNTSVCLAMIIKNEGPILPRLFDSVRGFVSEYCVMDTGSTDDTVDVLKSIDVPGQVLHGPFINFAQARNLMIDECRKLMKSCDYFLLLDADMILKVHP 128          
BLAST of NO20G02360 vs. NCBI_GenBank
Match: YP_009174077.1 (putative glycosyl transferase [Yellowstone lake mimivirus] >BAT21964.1 putative glycosyl transferase [Yellowstone lake mimivirus])

HSP 1 Score: 176.8 bits (447), Expect = 2.100e-40
Identity = 110/323 (34.06%), Postives = 174/323 (53.87%), Query Frame = 0
Query:   44 NTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLRAI----DMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQIS-SVEYENVRIIRRTADRIKVVGATHEYYDVPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNPRTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVERDYAVYMLSRCYLALDDVANARKYG-ELSASISNRAEPLYDLIYYLHHREQYALAWYYYTLASGI--PKPPVDQALFIVLDIYAFWLDFE 359
            N + CL MI+KNE  I+ RL  S+   +  +C+ DTGSTD+T +++       ++ GKI+  PF NF   RN  +  C   +   DY +LLDADM+L +   +N + L   D + ++Q S    Y+N+RI++      K VG THEY + P +     I K  ++I+D GDG  K DK +RD  LL   +A++P N R  FYLAN+  D+G+  DAI  Y++R  +  GW  E  Y+ Y +  CY  +  +++A  Y  E    +  R E L+++++Y   +    LA   Y +   I   K  +D  LF+   +Y++ + +E
Sbjct:    3 NPTLCLNMIVKNESKIIHRLLTSVLPIIDAFCICDTGSTDNTCEIITEFFEKHNIKGKIIKEPFKNFEYNRNFSLLNC---IGLTDYVLLLDADMILDI-RNFNKNMLSMSDSFYILQGSDQFYYQNMRIVKNNG-LYKYVGVTHEYINTPSNNRTIGIDKTQLFINDYGDGGCKSDKFERDILLLTNGIAEEPTNVRYHFYLANSYHDLGKNEDAIEMYKKRIAL-GGWNQEVWYSYYRIGLCYNKMKKISDAIYYWLEAYNYLPERLEALHEILHYYRVKGNQKLAIDIYNICKTIFDKKLKIDDYLFLQASVYSYKIYYE 319          
BLAST of NO20G02360 vs. NCBI_GenBank
Match: PPD38108.1 (hypothetical protein CTY16_20695 [Methylobacter sp.])

HSP 1 Score: 170.2 bits (430), Expect = 2.000e-38
Identity = 106/326 (32.52%), Postives = 169/326 (51.84%), Query Frame = 0
Query:   43 HNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLR--AIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYDVPDDYTRGLIP-KDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNPRTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVERDYAVYMLSR----CYLALDDVANARKYGELSASISNRAEPLYDLIYYLHHREQYALAWYYYTL-ASGIPKPPVDQALFIVLDIYAFWLDFEQA 361
            +N + CL M+++NE  ++ R  +S +  +  + ++DTGSTD+T ++++   +D+PG++ H  +++F   R  ++   R       Y ++LDADM + V   +        D Y  I+    E     ++         VG THEY D P   T+  I   D + +    DG  + DK +RD RLL ++L  DP N R++FYLA + +D+G+Y DA+ +YEQR+ M+N W  ER +A     R    C    D+   A    +  A   +RAEP+Y ++ YL  +  Y LAW      A+G+P PP D  LFI   +Y + L  E A
Sbjct:    3 NNKTICLCMMVRNESHVIKRALESAKPHIDYWVIVDTGSTDNTEEIIQQTLLDIPGELHHSKWVDFGHNRTEVVRLAR---NKAAYLLILDADMAVNVYAPFKHKLT--ADAYE-IRYEGDESYTQHMLVAAHHNWHYVGVTHEYIDAP---TKQYIDWMDELTLTHFADGGMRSDKFERDIRLLTEDLQKDPGNARSLFYLAQSYKDLGKYKDALYWYEQRAAMENSWDEERWFAQMQAGRMKLLCNYPWDEAVQALL--KAYAMRPSRAEPIYTVVRYLREQGSYQLAWQLCAFAANGMPLPPRD-ILFIDTPVYRYLLQLEYA 316          
BLAST of NO20G02360 vs. NCBI_GenBank
Match: WP_000526207.1 (glycosyl transferase [Bacillus thuringiensis] >ADY21567.1 glycosyl transferase, group 2 family protein [Bacillus thuringiensis serovar finitimus YBT-020] >OTX63306.1 glycosyl transferase [Bacillus thuringiensis serovar finitimus])

HSP 1 Score: 167.9 bits (424), Expect = 9.700e-38
Identity = 112/358 (31.28%), Postives = 175/358 (48.88%), Query Frame = 0
Query:   41 AGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVL----RAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYD-----VPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNP----RTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVER-DYAVYMLSRCYLAL--------------DDVANARKYGELSASIS------------NRAEPLYDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFE 359
            AG     CL MI+KNE  I+ R  ++ +  V    + DTGSTD T +++    +  ++PG + H PF NF   R+  ++  ++     DY ++LDADM+L VDP ++   L       L     ++Y   R+++ +    K VG THEY+D     V +DY   +   + + ++D GDG +K DK +RDERLL Q L+D    P    R +FYLA T   + ++ D+I +Y++R  ++ G WVE   Y++  +  CY  L              D+  NA+K  E   +++             RAEPLY L      + Q  +A  Y      IP P  D  LF+   +Y +  D+E
Sbjct:    9 AGEEKKLCLCMIVKNESRIMERCLNATKSIVDFVSICDTGSTDHTPEIIENWCKENEIPGTVHHEPFKNFGYNRSLAVSLAQKTYPEADYLLILDADMILEVDPNFDKTSLTEDHYLTLQYDIHIKYWLTRLLKASLP-WKSVGVTHEYWDIDRSKVGEDYNTRVARLETLVVNDPGDGGSKADKFERDERLLLQGLSDPETTPDLHIRYLFYLAQTYFHLSQFEDSIKWYKKR--VEAGGWVEEVFYSLLRIGFCYEQLATRSANKQLEVTEVDEKENAKKQEEQYTALAVLYFQKAWEYRPTRAEPLYQLARMYRLKSQNNIALMYALQGKEIPFPKND-LLFVDYHVYDYLFDYE 362          
BLAST of NO20G02360 vs. NCBI_GenBank
Match: WP_016717391.1 (glycosyl transferase [Bacillus cereus] >KYQ04691.1 Dolichol-phosphate mannosyltransferase in lipid-linked oligosaccharide synthesis cluster [Bacillus cereus])

HSP 1 Score: 167.5 bits (423), Expect = 1.300e-37
Identity = 110/358 (30.73%), Postives = 177/358 (49.44%), Query Frame = 0
Query:   41 AGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVL----RAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYD-----VPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNP----RTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVER-DYAVYMLSRCYLAL--------------DDVANARKYGELSASIS------------NRAEPLYDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFE 359
            AG     CL MI+KNE  I+ R  ++ +  V    + DTGSTD+T +++    +  ++PG + H PF NF   R+  ++  ++     DY ++LDADM+L VDP ++   L       L     ++Y   R+++ +    K VG THEY+D     V ++Y   +   + + ++D GDG +K DK +RDERLL Q L+D    P    R +FYLA T   + ++ D+I +Y++R  ++ G WVE   Y++  +  CY  L              D++ NA+   E  ++++             RAEPLY L      + Q  +A  Y      IP P  D  LF+   +Y +  D+E
Sbjct:    9 AGEEKKLCLCMIVKNESRIMERCLNATKSIVDFVSICDTGSTDNTPEIIENWCKENEIPGTVHHEPFKNFGYNRSLAVSLAQKTYPEADYLLILDADMILEVDPNFDKTSLTEDHYLTLQYDVHIKYWLTRLLKASLP-WKSVGVTHEYWDIDRSKVGENYNTRVARLETLVVNDPGDGGSKADKFERDERLLLQGLSDPETTPDLHIRYLFYLAQTYFHLSQFEDSIKWYKKR--VEAGGWVEEVFYSLLRIGFCYEQLANRAANKQHEVTEADEMENAKTQEEQYSALAIFYFQKAWEYRPTRAEPLYQLARMYRLKSQNNIALMYALQGKEIPFPK-DDLLFVDYHVYDYLFDYE 362          
BLAST of NO20G02360 vs. NCBI_GenBank
Match: WP_024760579.1 (glycosyl transferase family 2 [Streptomyces exfoliatus])

HSP 1 Score: 167.5 bits (423), Expect = 1.300e-37
Identity = 116/318 (36.48%), Postives = 169/318 (53.14%), Query Frame = 0
Query:   46 SACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLRA--IDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYDVPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNPRTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVERDYAVYMLSRCYLALDDVANARKYGELSASISNRAEPL---YDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFE 359
            S CL MI+KNE  ++ R   S+RG V  + + DTGSTD T D++R     +PG++   P++NF   R+  I + R      DY +LLDAD VLR D      DL   D Y +    S+EY   R++R      +  G THEY     D+ +  +  D++ I+D  DG ++ DK +RD RLL  EL  DP+NPRT+FYLA T+RDMGR  +A+P YE+R+ M  GW  E  Y+  +L    L  +  A       LS +  +R E L   Y+L+  L    +Y  A  +  +++ +     D  LF+   +Y + L FE
Sbjct:    4 SICLCMIVKNESKVIERCLTSVRGLVDTWVITDTGSTDGTQDLIRTALAGIPGELREEPWVNFGHNRSLNIARAR---GRADYLLLLDADHVLRQDGP--LPDLTA-DAYMIRHEGSLEYRIKRLVRGDLP-WRYEGVTHEYLTADRDHVQRNL--DVLSIEDHADGGSRHDKFERDARLLGAELDRDPDNPRTVFYLAQTMRDMGRADEAVPLYERRAAM-GGWGEEVYYS--LLQSGVLQAESGAWPSAMDALSRAWESRPERLEACYELVARLRKMRRYRAA--HAVVSAVLDGRQPDDLLFMQPWVYRYGLLFE 307          
BLAST of NO20G02360 vs. NCBI_GenBank
Match: WP_074601286.1 (glycosyl transferase [Bacillus cereus])

HSP 1 Score: 167.5 bits (423), Expect = 1.300e-37
Identity = 111/358 (31.01%), Postives = 175/358 (48.88%), Query Frame = 0
Query:   41 AGHNTSACLAMIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVL----RAIDMPGKILHGPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGKDVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYD-----VPDDYTRGLIPKDLVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNP----RTIFYLANTLRDMGRYADAIPYYEQRSHMDNGWWVER-DYAVYMLSRCYLAL--------------DDVANARKYGELSASIS------------NRAEPLYDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDIYAFWLDFE 359
            AG     CL MI+KNE  I+ R  ++ +  V    + DTGSTD T +++    +  ++PG + H PF NF   R+  ++  ++     DY ++LDADM+L VDP ++   L       L     ++Y   R+++ +    K VG THEY+D     V +DY   +   + + ++D GDG +K DK +RDERLL Q L+D    P    R +FYLA T   + ++ D+I +Y++R  ++ G WVE   Y++  +  CY  L              D+  NA+K  E   +++             RAEPLY L      + Q  +A  Y      +P P  D  LF+   +Y +  D+E
Sbjct:    9 AGEEKKLCLCMIVKNESRIMERCLNATKSIVDFVSICDTGSTDHTPEIIENWCKENEIPGTVHHEPFKNFGYNRSLAVSLAQKTYPEADYLLILDADMILEVDPNFDKTSLTEDHYLTLQYDIHIKYWLTRLLKASLP-WKSVGVTHEYWDIDRSKVGEDYNTRVARLETLVVNDPGDGGSKADKFERDERLLLQGLSDPETTPDLHIRYLFYLAQTYFHLSQFEDSIKWYKKR--VEAGGWVEEVFYSLLRIGFCYEQLATRSANKQLEVTEADEKENAKKQEEQYTALAVLYFQKAWEYRPTRAEPLYQLARMYRLKSQNNIALMYALQGKEVPFPKND-LLFVDYHVYDYLFDYE 362          
The following BLAST results are available for this feature:
BLAST of NO20G02360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854062.12.900e-17568.31glycosyl group 2 family protein, partial [Nannochl... [more]
EWM20048.16.000e-8064.25glycosyl transferase [Nannochloropsis gaditana][more]
EWM20169.16.500e-4270.94glycosyl group 2, partial [Nannochloropsis gaditan... [more]
EWM20245.11.900e-4171.30glycosyl group 2, partial [Nannochloropsis gaditan... [more]
YP_009174077.12.100e-4034.06putative glycosyl transferase [Yellowstone lake mi... [more]
PPD38108.12.000e-3832.52hypothetical protein CTY16_20695 [Methylobacter sp... [more]
WP_000526207.19.700e-3831.28glycosyl transferase [Bacillus thuringiensis] >ADY... [more]
WP_016717391.11.300e-3730.73glycosyl transferase [Bacillus cereus] >KYQ04691.1... [more]
WP_024760579.11.300e-3736.48glycosyl transferase family 2 [Streptomyces exfoli... [more]
WP_074601286.11.300e-3731.01glycosyl transferase [Bacillus cereus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G02360.1NO20G02360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595123gene_6463Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G02360.1NO20G02360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G02360 ID=NO20G02360|Name=NO20G02360|organism=Nannochloropsis oceanica|type=gene|length=2944bp
CTACCACTTACAGGTCCTTAATTTTCTTTTTGTCGTCAATCTTCTCCAGG
CCTTCGGCTGTCTCCTCCATTTTTCCCAAGCCTCCTCCTCCCCTTCGCAG
AATTTACTCTTTTCCCCCTATGCAAGAAAGACATCTCCTATCTAGCAATG
TCATCCACTAGACAATGAAAAAAAGACTATGCAGCTTGAGGAAATCATGA
CCTTCCGGAAGAAAAACATCGGGGCGCTGAGCACAAGGAGCCAAAGTAGC
TCGTTGGTTTGGGATGAGCGTTTTCCCCATCACCTAGTCGGGGACGATGG
AGAGCTCGGCCTCTCTTGCTGATTCGCCGAGGCAGTAAAAGGCCTTTCTC
ATCTATCTCATTGATGAAATGAGGGTTTAGAAGTTCAAGGAAACGCGACC
CTTCGGAGGGAAAGCATAGGCAGCCGCGAGGACCAGGGGCCCATGTCTTA
AGAAAAACGTTACCCATCCCAAATACTGGGTCACTCCAGGGCGGCTGCTC
CTGCTGTTTCTGCATGCTCCGTCATCCCTTCCCCATCATCCATCCCCTGC
AAAACAGTAGGTATAAAGTAGCACACCTTGGAGCACATCGTGCAGCTCTC
GATCTCATGTGGGGGTGTTGGGGGCATTTATGCGGCGACGGCAATTCCAT
GGGCCTCCCTAATCGATTCGCCAAGCCCGTGATGGACCTTCTATCTACAA
CCCACTCGGCTACACACCCAAAAACACACGCACGCACACAATTGAAGAGT
TTATCATGCCTTTCACGCATCGCCCGCTCTGGGTGCGAACTTTACTCGCC
GATGGGGTGCATAGTAGGTCTCCCATGCTATTATGAGACCAAATTAACTG
ATGGGTCTGACATGCTTTCTCCTCTTTCTCAACCCCCGACATAGTATGAA
GCCGCTTCATCATCAATGCCTGGCCATTTTGGGTATTCTTGCATGTCTAC
TTTTGGGATTTAGTGATGCGGCTGGCCATAACACCAGCGCTTGTCTTGCA
ATGATCATGAAGAACGAGGGGCCAATATTGCCCCGCCTTTTTGATAGTAT
TCGCGGCTTTGTATCGGAATATTGTGTCATGGATACCGGCTCGACGGACG
ATACTGTGGATGTATTGAGAGCTATTGATATGCCGGGAAAGATTTTGCAC
GGACCCTTCATCAACTTTGCCCAGGCACGCAATGCGATGATCAATCAGTG
CCGTGAGGTGATGACCTCGTGTGATTACTTTGTGCTTCTGGATGCGGACA
TGGTGCTGCGTGTTGATCCGGCATGGAATTGGGATGATCTGGATGGGAAG
GATGTGTACAATTTGATTCAGATCTCAAGTGTGGAGTACGAGAACGTGCG
GATCATCCGTCGCACGGCAGACCGAATCAAGGTAGTGGGCGCAACCCATG
AGTACTACGATGTGCCCGATGATTACACGCGAGGGCTGATCCCTAAAGAC
TTGGTATATATTGATGACGTGGGCGATGGAAAAGCCAAAGGAGACAAATC
ACAACGCGATGAGCGGTTGCTCCGGCAGGAGCTTGCAGACGACCCAAACA
ATCCACGAACAATCTTTTACTTGGCAAATACCCTAAGGGATATGGGAAGG
TACGCCGACGCCATACCCTATTACGAGCAGCGCAGTCACATGGACAACGG
ATGGTGGGTGGAACGGGACTATGCTGTGTACATGCTTTCTCGATGCTACC
TGGCGCTAGACGACGTCGCCAATGCTAGGAAGTACGGTGAGCTATCGGCG
AGCATCTCGAACCGAGCAGAGCCTCTGTACGACTTGATCTACTACCTGCA
CCACCGCGAACAGTATGCCTTGGCATGGTATTACTATACTCTAGCGTCCG
GTATCCCTAAACCTCCAGTGGACCAAGCACTGTTCATTGTCTTGGACATA
TATGCTTTCTGGCTTGATTTCGAACAGGCGACGCTATCGCGGCATATTTA
TCCTACTCAACCCACACTTGTCCTTGAGGCAGGGTTATCGTTCTTGAACA
ATGTGCATGCGCCCCAGCACTTGCGGAACTACTTTTACAAGAGAGAATGG
GGCTCACATACAGTGCAATATCTCGAGACTAACATGTCGTACCACCATTA
TGATGCGACACACGCCAAGACGTTCTGGCAGTTCATACTTCACCCAACAT
CCTCAACAGCAAGTGATAATACCACCGATGTGGACAACTCGTGCCCTCTC
AGCTTATTGGAAGGACATAGACCCGAGGAACTCATGGACGATGAGACTCT
TCCAAACCACCTTCCATTATTTGCGACCATGCCTGAGGTGGAGGTGTCGT
GCATAAACCAGTGGTACCCTATGCAGATAGGTAAAGTGGTGGAGGGGGTA
TGTGAGGTGCACACCTCTGTTGCGACTCCTCGCAGTTTCTCGTTCCTAAG
CAAAGGCAGCAACGGTGCTCTGTATCAAGACGCCACGTGGTTTTTAGCAA
AGTCGCATACCGAAGATACGGCATCAGGCAGAGTGCTTTTCCACTTTGTT
GTCATAGATGCTAGTTCTCGCATCAAAACTTATACGTTGCCCTTTATGCT
GAGGGAGACGCCGTCTGGTACGAATGCCGAGACGGCTTTGTTCTTGCGAG
AGGACGAAATCATCATCGTTTTCATTGATGGTGAGGATGCGGGGGACGTG
ACATCTGTGGTCCATCGCCTCCCGTTGATAGCTTTGGGCCCGTTGCTAGT
GACAGGACCTAAGCATTAAAAGGGTGCTGCTCCAGTTATGATAAACGTAC
TAACCTCTGCAATATATTGCCCCCTCCAAAGACTCTGTACTTTCCCTGTG
TACTTTCAAAACCTTGCATCCCGACGCGCTGCTCTCACTCTTACAGTACA
TGTACGATGGGAGTGGCCTGTACCTAATTCCTCGTGTCAGTCTATTGAGA
AAAAGTCAACCAATGCCAACCAAAGAACCAATCACGAAGGCAAT
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protein sequence of NO20G02360.1

>NO20G02360.1-protein ID=NO20G02360.1-protein|Name=NO20G02360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=623bp
MGLTCFLLFLNPRHSMKPLHHQCLAILGILACLLLGFSDAAGHNTSACLA
MIMKNEGPILPRLFDSIRGFVSEYCVMDTGSTDDTVDVLRAIDMPGKILH
GPFINFAQARNAMINQCREVMTSCDYFVLLDADMVLRVDPAWNWDDLDGK
DVYNLIQISSVEYENVRIIRRTADRIKVVGATHEYYDVPDDYTRGLIPKD
LVYIDDVGDGKAKGDKSQRDERLLRQELADDPNNPRTIFYLANTLRDMGR
YADAIPYYEQRSHMDNGWWVERDYAVYMLSRCYLALDDVANARKYGELSA
SISNRAEPLYDLIYYLHHREQYALAWYYYTLASGIPKPPVDQALFIVLDI
YAFWLDFEQATLSRHIYPTQPTLVLEAGLSFLNNVHAPQHLRNYFYKREW
GSHTVQYLETNMSYHHYDATHAKTFWQFILHPTSSTASDNTTDVDNSCPL
SLLEGHRPEELMDDETLPNHLPLFATMPEVEVSCINQWYPMQIGKVVEGV
CEVHTSVATPRSFSFLSKGSNGALYQDATWFLAKSHTEDTASGRVLFHFV
VIDASSRIKTYTLPFMLRETPSGTNAETALFLREDEIIIVFIDGEDAGDV
TSVVHRLPLIALGPLLVTGPKH*
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Synonyms
Publications