NO20G02350, NO20G02350 (gene) Nannochloropsis oceanica

Overview
NameNO20G02350
Unique NameNO20G02350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3400
Alignment locationchr20:707259..710658 +

Link to JBrowse

Properties
Property NameValue
Descriptionnon-photochemical quenching 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:707259..710658 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0046422violaxanthin de-epoxidase activity
GO:0046422violaxanthin de-epoxidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0009507chloroplast
GO:0009507chloroplast
Vocabulary: INTERPRO
TermDefinition
IPR012674Calycin
IPR010788VDE
Homology
[Close]
BLAST of NO20G02350 vs. NCBI_GenBank
Match: AFP57681.1 (violaxanthin de-epoxidase [Nicotiana tabacum])

HSP 1 Score: 145.2 bits (365), Expect = 6.300e-31
Identity = 80/259 (30.89%), Postives = 128/259 (49.42%), Query Frame = 0 
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAA----DPERYMFVWYEGCNKAWCGFTGGVVFSRT 539
            CL+  C  EL   + +      + CL TC   P +  CQ++CGD+++  V+  F+ CA+S+ +CVP++ +  +  +PDPS+LV    +   +G+WFIT G+NP  D F CQ H+   E                                                +V ++S+++   +  +G F   FTR+  Q F QD  YPG+L+     YL  +DDWYIL++     PE Y+FV+Y+G N AW G+ G V+++R+
Sbjct:  143 CLLKECRLELAKCISNPACAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPRKSDVGDFPVPDPSVLVQKFDMKDFSGKWFITRGLNPTFDAFDCQLHEFHTE---------------------------------------------ENKLVGNLSWRI---RTPDGGF---FTRSAVQKFVQDPKYPGILYNHDNEYLHYQDDWYILSSKVENSPEDYIFVYYKGRNDAWDGYGGSVLYTRS 350
[Close]
BLAST of NO20G02350 vs. NCBI_GenBank
Match: XP_009607573.1 (PREDICTED: violaxanthin de-epoxidase, chloroplastic [Nicotiana tomentosiformis] >XP_009607574.1 PREDICTED: violaxanthin de-epoxidase, chloroplastic [Nicotiana tomentosiformis])

HSP 1 Score: 145.2 bits (365), Expect = 6.300e-31
Identity = 80/259 (30.89%), Postives = 128/259 (49.42%), Query Frame = 0 
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAA----DPERYMFVWYEGCNKAWCGFTGGVVFSRT 539
            CL+  C  EL   + +      + CL TC   P +  CQ++CGD+++  V+  F+ CA+S+ +CVP++ +  +  +PDPS+LV    +   +G+WFIT G+NP  D F CQ H+   E                                                +V ++S+++   +  +G F   FTR+  Q F QD  YPG+L+     YL  +DDWYIL++     PE Y+FV+Y+G N AW G+ G V+++R+
Sbjct:  143 CLLKECRLELAKCISNPACAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPRKSDVGDFPVPDPSVLVQKFDMKDFSGKWFITRGLNPTFDAFDCQLHEFHTE---------------------------------------------ENKLVGNLSWRI---RTPDGGF---FTRSAVQKFVQDPKYPGILYNHDNEYLHYQDDWYILSSKVENSPEDYIFVYYKGRNDAWDGYGGSVLYTRS 350
[Close]
BLAST of NO20G02350 vs. NCBI_GenBank
Match: GAY66035.1 (hypothetical protein CUMW_245520 [Citrus unshiu])

HSP 1 Score: 145.2 bits (365), Expect = 6.300e-31
Identity = 78/259 (30.12%), Postives = 130/259 (50.19%), Query Frame = 0 
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAA----DPERYMFVWYEGCNKAWCGFTGGVVFSRT 539
            CL+  C  EL   + +      + CL TC   P +  CQ++CGD+++  V+  F+ CA+S+ +CVPQ+ +  E  +PDP++LV S +L   NG+W+I+ G+NP  D F CQ H+   E                                                ++ ++S+++   +  +G F   FTR+  Q F QD ++PG+L+     YL  +DDWYIL++    +P+ Y+FV+Y G N AW G+ G  +++R+
Sbjct:  148 CLLRECRLELAECISNPACAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPQKSDLGEFPVPDPAILVKSFNLKDFNGKWYISSGLNPSFDTFDCQLHEFHTE---------------------------------------------SNKLIGNLSWRI---RTPDGGF---FTRSAMQRFVQDPIHPGILYNHDNEYLHYKDDWYILSSKIQNEPDDYVFVYYRGSNDAWDGYGGAFLYTRS 355
[Close]
BLAST of NO20G02350 vs. NCBI_GenBank
Match: XP_011077080.1 (violaxanthin de-epoxidase, chloroplastic [Sesamum indicum])

HSP 1 Score: 144.8 bits (364), Expect = 8.200e-31
Identity = 78/259 (30.12%), Postives = 126/259 (48.65%), Query Frame = 0 
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAA----DPERYMFVWYEGCNKAWCGFTGGVVFSRT 539
            CL+  C  EL   + +      + CL TC   P +  CQ++CGD+++  V+  F+ CA+S+ +CVP++ +  E   PDP++LV +  + + NG+W+IT G+NP  D F CQ H+   E                                                +V ++S+++      + P    FTR+  Q F QD  YPG+L+     +L  +DDWYIL++     P+ Y+FV+Y G N AW G+ G VV++R+
Sbjct:  144 CLLKECRLELAKCIANPSCAANIACLQTCNNRPDETECQIKCGDLFENSVVDEFNDCAVSRKKCVPRKSDLGEFPAPDPTVLVQNFDINNFNGKWYITRGLNPTFDTFDCQLHEFHTE---------------------------------------------SNKLVGNISWRI------KTPDTGFFTRSTVQRFVQDPKYPGILYNHDNEFLHYQDDWYILSSKVENQPDDYIFVYYRGRNDAWDGYGGAVVYTRS 351
[Close]
BLAST of NO20G02350 vs. NCBI_GenBank
Match: XP_021650543.1 (violaxanthin de-epoxidase, chloroplastic-like isoform X2 [Hevea brasiliensis])

HSP 1 Score: 144.8 bits (364), Expect = 8.200e-31
Identity = 80/259 (30.89%), Postives = 126/259 (48.65%), Query Frame = 0 
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAADPER----YMFVWYEGCNKAWCGFTGGVVFSRT 539
            CL+  C  EL   + +      + CL TC   P +  CQ++CGD+++  V+  F+ CA+S+  CVPQ+ +  +  +PDP++LV S ++   NG+W+IT G+NP  D F CQ H+  VE                                                +V ++S+++        P    FTR+  Q F QD++ PG+L+     YL  +DDWYIL++  E     Y+FV+Y G N AW G+ G VV++R+
Sbjct:  125 CLLKECRLELAKCIANPACAANIACLQTCNNRPDETECQIKCGDLFENSVVDEFNGCAVSRKNCVPQKSDVGQFPVPDPAVLVKSFNMADFNGKWYITSGLNPTFDTFDCQLHEFHVE---------------------------------------------SNKLVGNLSWRI------RTPDSGFFTRSTVQRFVQDAMQPGILYNHDNEYLHYQDDWYILSSKVENNSDDYIFVYYRGRNDAWEGYGGAVVYTRS 332
[Close]
BLAST of NO20G02350 vs. NCBI_GenBank
Match: XP_021650541.1 (violaxanthin de-epoxidase, chloroplastic-like isoform X1 [Hevea brasiliensis] >XP_021650542.1 violaxanthin de-epoxidase, chloroplastic-like isoform X1 [Hevea brasiliensis])

HSP 1 Score: 144.8 bits (364), Expect = 8.200e-31
Identity = 80/259 (30.89%), Postives = 126/259 (48.65%), Query Frame = 0 
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAADPER----YMFVWYEGCNKAWCGFTGGVVFSRT 539
            CL+  C  EL   + +      + CL TC   P +  CQ++CGD+++  V+  F+ CA+S+  CVPQ+ +  +  +PDP++LV S ++   NG+W+IT G+NP  D F CQ H+  VE                                                +V ++S+++        P    FTR+  Q F QD++ PG+L+     YL  +DDWYIL++  E     Y+FV+Y G N AW G+ G VV++R+
Sbjct:  148 CLLKECRLELAKCIANPACAANIACLQTCNNRPDETECQIKCGDLFENSVVDEFNGCAVSRKNCVPQKSDVGQFPVPDPAVLVKSFNMADFNGKWYITSGLNPTFDTFDCQLHEFHVE---------------------------------------------SNKLVGNLSWRI------RTPDSGFFTRSTVQRFVQDAMQPGILYNHDNEYLHYQDDWYILSSKVENNSDDYIFVYYRGRNDAWEGYGGAVVYTRS 355
[Close]
BLAST of NO20G02350 vs. NCBI_GenBank
Match: NP_001275810.1 (violaxanthin de-epoxidase [Citrus sinensis] >ADH82116.1 violaxanthin de-epoxidase [Citrus sinensis])

HSP 1 Score: 144.4 bits (363), Expect = 1.100e-30
Identity = 78/259 (30.12%), Postives = 130/259 (50.19%), Query Frame = 0 
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAA----DPERYMFVWYEGCNKAWCGFTGGVVFSRT 539
            CL+  C  EL   + +      + CL TC   P +  CQ++CGD+++  V+  F+ CA+S+ +CVPQ+ +  E  +PDP++LV S +L   NG+W+I+ G+NP  D F CQ H+   E                                                ++ ++S+++   +  +G F   FTR+  Q F QD ++PG+L+     YL  +DDWYIL++    +P+ Y+FV+Y G N AW G+ G  +++R+
Sbjct:  148 CLLRECRLELAECISNPACAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPQKSDLGEFPVPDPAILVKSFNLKDFNGKWYISSGLNPSFDTFDCQLHEFHTE---------------------------------------------SNKLIGNLSWRI---RTPDGGF---FTRSAMQRFFQDPIHPGILYNHDNEYLHYKDDWYILSSKIQNEPDDYVFVYYRGSNDAWDGYGGAFLYTRS 355
[Close]
BLAST of NO20G02350 vs. NCBI_GenBank
Match: AFP28802.1 (violaxanthin de-epoxidase 1 [Vitis vinifera])

HSP 1 Score: 144.4 bits (363), Expect = 1.100e-30
Identity = 79/259 (30.50%), Postives = 130/259 (50.19%), Query Frame = 0 
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAA----DPERYMFVWYEGCNKAWCGFTGGVVFSRT 539
            CL+  C  EL   + +      + CL TC   P +  CQ++CGD+++ +V+  F+ CA+S+ +CVP++ +  E  +PDP++LV S ++   +G+WFIT G+NP  D F CQ H+   E                                                +V ++S+++   +  +G F   FTR+  Q F QD   PG+L+     YL  +DDWY+L++     P+ Y+FV+Y+G N AW G+ G VV++R+
Sbjct:  147 CLLKECRLELAKCIANPSCAANVACLQTCNNRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPRKSDIGEFPVPDPAVLVKSFNIADFSGKWFITSGLNPTFDTFDCQLHEFHTE---------------------------------------------SNKLVRNLSWRI---RTPDGGF---FTRSTMQRFVQDPNQPGILYNHDNEYLHYQDDWYVLSSKIENKPDDYVFVYYQGRNDAWDGYGGAVVYTRS 354
[Close]
BLAST of NO20G02350 vs. NCBI_GenBank
Match: XP_007207430.1 (violaxanthin de-epoxidase, chloroplastic [Prunus persica] >XP_020422931.1 violaxanthin de-epoxidase, chloroplastic [Prunus persica] >ONI05098.1 hypothetical protein PRUPE_6G356100 [Prunus persica] >ONI05099.1 hypothetical protein PRUPE_6G356100 [Prunus persica] >ONI05100.1 hypothetical protein PRUPE_6G356100 [Prunus persica])

HSP 1 Score: 144.4 bits (363), Expect = 1.100e-30
Identity = 80/259 (30.89%), Postives = 127/259 (49.03%), Query Frame = 0 
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAA----DPERYMFVWYEGCNKAWCGFTGGVVFSRT 539
            CL+  C  EL   + +      + CL TC   P +  CQ++CGD+++  V+  F+ CA+S+ +CVP++ +  E  +PDP++LV S  +   NG+WFIT G+NP  D F CQ H+   E                                                +V ++S+++   +  +G F   FTR+  Q F QD   PG+L+     YL  +DDWYIL++     P+ Y+FV+Y G N AW G+ G V+++R+
Sbjct:  145 CLLKECRVELAKCIGNPSCAANIACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPKKSDVGEFPIPDPAVLVKSFDIEKFNGKWFITSGLNPTFDAFDCQLHEFHTE---------------------------------------------SSKLVGNLSWRI---RTPDGGF---FTRSAVQKFVQDPNQPGILYNHDNDYLHYQDDWYILSSKMENKPDDYIFVYYRGRNDAWDGYGGAVIYTRS 352
[Close]
BLAST of NO20G02350 vs. NCBI_GenBank
Match: XP_004494767.1 (PREDICTED: violaxanthin de-epoxidase, chloroplastic isoform X1 [Cicer arietinum])

HSP 1 Score: 144.4 bits (363), Expect = 1.100e-30
Identity = 82/259 (31.66%), Postives = 126/259 (48.65%), Query Frame = 0 
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAAD----PERYMFVWYEGCNKAWCGFTGGVVFSRT 539
            CL+  C  EL   L +      + CL TC   P +  CQ+RCGD+++  V+  F+ CA+S+ +CVP++ +  E   P+P +LV S ++   NG+WFIT G+NP  D F CQ H+   E                                                +V ++S+++      +G FL   TR+  Q F QD   PG+L+ R   YL  +DDWYIL++     P+ Y+F++Y G N AW G+ G VV++R+
Sbjct:  128 CLLKECRTELVKCLANPSCAANIACLQTCNNRPDETECQIRCGDVFENSVVDEFNECAVSRKKCVPKKSDLGEFPAPNPDVLVKSFNIADFNGKWFITSGLNPTFDAFDCQLHEFHTE---------------------------------------------SNKLVGNISWRI---PTPDGGFL---TRSTVQKFVQDPSNPGILYNRDNEYLNYQDDWYILSSQIENKPDDYIFIYYRGRNDAWDGYGGAVVYTRS 335
The following BLAST results are available for this feature:
BLAST of NO20G02350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
AFP57681.16.300e-3130.89violaxanthin de-epoxidase [Nicotiana tabacum][more]
XP_009607573.16.300e-3130.89PREDICTED: violaxanthin de-epoxidase, chloroplasti... [more]
GAY66035.16.300e-3130.12hypothetical protein CUMW_245520 [Citrus unshiu][more]
XP_011077080.18.200e-3130.12violaxanthin de-epoxidase, chloroplastic [Sesamum ... [more]
XP_021650543.18.200e-3130.89violaxanthin de-epoxidase, chloroplastic-like isof... [more]
XP_021650541.18.200e-3130.89violaxanthin de-epoxidase, chloroplastic-like isof... [more]
NP_001275810.11.100e-3030.12violaxanthin de-epoxidase [Citrus sinensis] >ADH82... [more]
AFP28802.11.100e-3030.50violaxanthin de-epoxidase 1 [Vitis vinifera][more]
XP_007207430.11.100e-3030.89violaxanthin de-epoxidase, chloroplastic [Prunus p... [more]
XP_004494767.11.100e-3031.66PREDICTED: violaxanthin de-epoxidase, chloroplasti... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G02350.1NO20G02350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595121gene_6462Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G02350.1NO20G02350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G02350 ID=NO20G02350|Name=NO20G02350|organism=Nannochloropsis oceanica|type=gene|length=3400bp
CACAGGCACACAAGCGTGCAGGCAACATGTGTGCAGGGACAAGGGTAAAG
GTGGCGAGCGTCTTTTCCCTTCCTCCCTCTTTAGCAGTATCAGCACCACC
ACCATCCTCCTTCTCCTCCTCAACGGGATTGGACACCACGGCCAGCAGCT
TTTCGCCCTCTTCCACAAGGCAAATTAAACCACGGAGGGCGCGCAAGCAG
CACAAAAATCACACACTTGTCCTAGCAACGGTGGCAGCACTCGTTGGAGG
GAGAGATAGAGGCGTCGATGGCGCCTTTATTGGAGTAGGAAGTGGCGTGG
TGTGTGGGGGGAGGAGACGAGGAGGGGAGGAGCTAGGTCCATGGCAGTCA
GCCACGCCTACCTCTCTCAATGACGATGGTGGGTCTGCCGAAATATGCCT
AAGCACGACGACAAGCAAGTGGCGGAGACGAGGAAGGATGGCCACGGCAG
TGGCATCATCATCACCACCACCACGATCTTCTTGTTCCTCCTCCATTCGG
CCAGATTCGGCTACCGCCACCCCGTCTTTTTCATCGTCATCATCCTCCTC
CTCCCGTCCCTCCTCATCTCCCTTTCCTTCCTCCTCCACGTCCTCCTGTT
GGGCCTGGCCACTAATCCTTCCCCCTCTCTCCCTCCCCTCCCTCCCTCGC
CGGCTTCTCCCCCTCCTTGCCGCCTATCTCCCCTCCTTCCTCGCTCCCTC
CTTCCCTTTCTCCTTCTCATTATCCTCCTCCTCCTTTTCCTCCTCCATTG
TTGCTGCTGCTGCCGGTGGAGGTGGAGGTGGTGGTGGAGGACAGGAGCGA
GAGGCCGTGAGTCTAGAATATCTCCATCGTCGAAGCGGGAGGGAGGGAGG
GAGGGCGGGAGGGAAGACGGGCATCGATTACGGCTGCCTGGTAGGTCGTT
GTGGGAAGGAGCTTGGGATGGCATTGGTGGATTTCCGgtaaggaggggag
gaagggagggagggagggagggagggtcttttttcaattccgacgtaagt
catgtggcacatgtaatcatttttcctccctcctcttccttcctttcctt
ttctttccttcctcccttctctttttcttcctctttccttcaacctcacg
tgaacgcacgcacgcatgtatctcacacccacccccacgcccacagGGGG
ATGCATGAATTGACTTGCCTCGTAACATGCGGTCCTTCCGACTTGGCCTG
TCAGgtacataggccctccctccctccctccctccctccctccctccctc
cctctctatcaatcttgccgctttccctctttctctccctccctctcaaa
tctccctccgtatgtcctcagtctccgtccggaccttccccccattcctc
cttccacatcacccaaccctccctcctccctccctccctcctccctccct
ccctccctccccccctcgctagATGCGGTGCGGCGACATGTACAAGATGG
ACGTCCTTCAAAACTTCCACACGTGTGCCATCAGCCAGCACCAATGCGTG
CCGCAACGAGTGGAAGAAGAAAATAAGgcaagccctccctccctccctcc
ctccttccctccctcccttcctccctccctccccttcttccgccgtgtta
gatcacctgctttcctgcttgtattctaaagaacattcagattttgaata
ccatctcacatccctccctccctccctctcgcccgcccgccctctatggc
agCTCCCCGACCCCTCCCTCCTTGTTCCCTCCCTCTCCCTCCCCTCCCTC
AACGGCGAGTGGTTCATCACCCACGGCATTAACCCCATCATGGACTGTTT
TCCCTGTCAGCACCATCAGgtgggtgggtaggtcgggaggtagggaggta
ggaaggtatagagagactgagaggcgcacgccctgcctgcattcttttcc
ctcctttcttccctccgtcactccctccctccctccctccctctctccct
ctctccatttgccatgacgagggtacttttcgcaaaagctgatcttctaa
gccttgcctccctccctccctccctccctcccgcccgcccgcccgcccgc
ccgccctcccaccttcctcccctccttcagGCGCTGGTCGAGCTCCCTCC
CTCTTCTCCTATCCTCCTCCACTCCTCCAGCACCACCAAGCAGCAGCAAT
CACATCAACCTCTATCATCGCAACAAGAAGGAGGCAAAGGGGTTCCAGGC
AGTGTCTCTTCCCCCCCTCCCTCCCTCCGTCCCTCCATCGTTTTTGACGT
TTCCTATCAGGTGTCTCATGACCAGGGGAAGGAAGGTCCTTTTCTTCAAA
CGTTCACACGGAATCTCCAGCAGCATTTCACGCAGgtacgccctccctcc
ctccttccttcccttccttccatctcttccttccgtcctcctcacccctc
tatccccctcctctttcctccttccttccctccctccctttcctcttccc
ccccccttgctcacccccctcctcttccctccctccctccctccctccct
ccccttcttcttttctattcctcccacccccttcctctttcttcctttcc
tccctctcttcttccctcctctccatccctctcactcccctcctctttct
tccctcccctcctccctcccttcctccctcccccagGATTCTCTTTACCC
CGGCCTCCTCCACGCTCGAGCTCAAGGCTATCTCCAACAAGAAGACGATT
GGTACATTCTGGCTGCTGATCCCGAACGgtaagtctccctcccttcctcc
ctccctccttccctctatgcctgcctgcctgtcgtgcattgattctttcc
aaattctcacgttcctccctctctccttcccccccttccctccctccctc
tctcagCTACATGTTTGTCTGGTATGAGGGTTGCAACAAGGCCTGGTGTG
GTTTTACCGGTGGCGTCGTTTTTTCCCGCACCCCCTCCCTTCCTCCTTCC
CTCTACCCTTCCCTCGAGGAGACGGCGCGCAAGGTGGGGGTGAAGGGAGG
GATCGAGGGCATGTGCAAAGTGGACAACACTCAGTGTAATTTGAAGTAAA
GGGTGCAAACTCTCCCTCTCTCCCTTCCTCCCTCCTCTTCTTCCTTGCGT
GAGCGGGGAGGAGGATGGAGAAGAGGGCGAGGAGAAGTAGGAGAAGGAGG
AGAGGAACGAGGAATAGGAAGACGGTGACGACGTTGATGGTGGTCCTTCT
GTGAAGAGGATTAATAGAAAAGTAGATGAAAGAAGTGGAGAAAAGTGATT
TGGCGGGGAGAAGAGAATGAGGAGGGGGGGGGTAAAGGGTGTACAAGGAA
AAGAAAGGAAGCAAGACATTGCCAGTAGCATAGAAGCATGCAAATATAGG
TTAGAAAAATGAATCAACGACCCCTTACTTTGGACACCTGCGTGTAAATC
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protein sequence of NO20G02350.1

>NO20G02350.1-protein ID=NO20G02350.1-protein|Name=NO20G02350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=577bp
MCAGTRVKVASVFSLPPSLAVSAPPPSSFSSSTGLDTTASSFSPSSTRQI
KPRRARKQHKNHTLVLATVAALVGGRDRGVDGAFIGVGSGVVCGGRRRGG
EELGPWQSATPTSLNDDGGSAEICLSTTTSKWRRRGRMATAVASSSPPPR
SSCSSSIRPDSATATPSFSSSSSSSSRPSSSPFPSSSTSSCWAWPLILPP
LSLPSLPRRLLPLLAAYLPSFLAPSFPFSFSLSSSSFSSSIVAAAAGGGG
GGGGGQEREAVSLEYLHRRSGREGGRAGGKTGIDYGCLVGRCGKELGMAL
VDFRGMHELTCLVTCGPSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVP
QRVEEENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALV
ELPPSSPILLHSSSTTKQQQSHQPLSSQQEGGKGVPGSVSSPPPSLRPSI
VFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQ
EDDWYILAADPERYMFVWYEGCNKAWCGFTGGVVFSRTPSLPPSLYPSLE
ETARKVGVKGGIEGMCKVDNTQCNLK*
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Synonyms
Publications