NO20G02350, NO20G02350 (gene) Nannochloropsis oceanica

Overview
NameNO20G02350
Unique NameNO20G02350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3400
Alignment locationchr20:707259..710658 +

Link to JBrowse

Properties
Property NameValue
Descriptionnon-photochemical quenching 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:707259..710658 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0046422violaxanthin de-epoxidase activity
GO:0046422violaxanthin de-epoxidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0009507chloroplast
GO:0009507chloroplast
Vocabulary: INTERPRO
TermDefinition
IPR012674Calycin
IPR010788VDE
Homology
BLAST of NO20G02350 vs. NCBI_GenBank
Match: CEM35152.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 211.1 bits (536), Expect = 9.300e-51
Identity = 114/290 (39.31%), Postives = 152/290 (52.41%), Query Frame = 0
Query:  283 IDYGCLVGRCGKELGMALVDFRGMHELTCLVTCGPSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVEEE-----------------NKLPDPS------LLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLR---------PSIVFDVSYQVSHDQ-GKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAADPERYMFVWYEGCNKAWCGFTGGVVFSRTP 540
            +DY  L+ +CG  L  A+ D RG+HE  CL+ CG  D+ACQMRCGD+Y+ DVL+ FH CAIS+HQ +PQR++                    +LP  S       +V +L   +L GEW++ +G+NP+ DCFPCQHH A V                                  V     +P P +R           + FD+SY+V     G + PF   FTR+++Q F      PG+L +    YL Q DDWYIL+ADPERY  V+Y GCN AWCG+ GGVV+SRTP
Sbjct:   31 VDYYGLLTKCGGPLLRAMSDRRGLHEFVCLMKCGMDDIACQMRCGDLYEEDVLKEFHICAISEHQVIPQRIDRHAAEGRVRDDQGKSEQVARQLPGASEVDRRIPVVAALEPAALQGEWWVVYGLNPVFDCFPCQHHTASV-----------------------VKSAPGKTSEAVRSDDGAPHPIMRWKNGAWTAANGVRFDISYRVPVPHGGDKQPF---FTRHVEQVFFPHRSSPGVLRSHDPTYLHQSDDWYILSADPERYFIVYYMGCNDAWCGYDGGVVYSRTP 294          
BLAST of NO20G02350 vs. NCBI_GenBank
Match: XP_019198311.1 (PREDICTED: violaxanthin de-epoxidase, chloroplastic [Ipomoea nil])

HSP 1 Score: 152.1 bits (383), Expect = 5.100e-33
Identity = 84/259 (32.43%), Postives = 129/259 (49.81%), Query Frame = 0
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAA----DPERYMFVWYEGCNKAWCGFTGGVVFSRT 539
            CL+  C  EL   + +      + CL TC   P +  CQ++CGD+++  V+  F+ CA+S+ +CVP++ +  E  +PDPS+LV S  +   NG+WFIT G+NP  D F CQ H+  VE                                                +V ++S+++   +  +G F   FTR+  Q F QD  YPG+L+     YL  EDDWYIL++     P+ Y+FV+Y G N AW G+ G V+++R+
Sbjct:  145 CLLKECRLELAKCIANPSCAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPRKSDVGEFPVPDPSVLVKSFDMKDFNGKWFITRGLNPTFDTFDCQLHEFHVE---------------------------------------------DNKLVGNISWRI---RTPDGAF---FTRSALQKFVQDPQYPGILYNHGNEYLHYEDDWYILSSKVENTPDDYIFVYYRGKNDAWDGYGGAVLYTRS 352          
BLAST of NO20G02350 vs. NCBI_GenBank
Match: KZV37303.1 (hypothetical protein F511_16452 [Dorcoceras hygrometricum])

HSP 1 Score: 147.1 bits (370), Expect = 1.600e-31
Identity = 79/260 (30.38%), Postives = 128/260 (49.23%), Query Frame = 0
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAA----DPERYMFVWYEGCNKAWCGFTGGVVFSRTP 540
            CL+  C  EL   + +      + CL TC   P +  CQ++CGD+++  V+  F+ CA+S+ +CVP++ +  E   PDP++LV + ++   NG+WFIT G+NP  D F CQ H+   E                                                +V ++S+++      + P    FTR+  Q F QD  YPG+L+     +L  +DDWYIL++    +P+ Y+FV+Y G N AW G+ G V+++R+P
Sbjct:  127 CLLKECKLELAKCIANPSCAANIACLQTCNNRPDETECQIKCGDLFENSVVDEFNDCAVSRKKCVPRKSDVGEFPAPDPAVLVQNFNINDFNGKWFITSGLNPTFDTFDCQLHEFHTE---------------------------------------------SNKLVGNLSWRI------KTPDTGFFTRSAVQEFVQDPKYPGILYNHDNEFLHYQDDWYILSSKVLNEPDDYIFVYYRGRNDAWDGYGGAVLYTRSP 335          
BLAST of NO20G02350 vs. NCBI_GenBank
Match: ANT70525.1 (violaxanthin de-epoxidase [Nannochloropsis oceanica])

HSP 1 Score: 146.4 bits (368), Expect = 2.800e-31
Identity = 79/258 (30.62%), Postives = 127/258 (49.22%), Query Frame = 0
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVEEENKLPDP--SLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAADPERYMFVWYEGCNKAWCGFTGGVVFSRTPS 541
            CL+  C  EL   ++D + +  + CL TC     ++ CQ+ CGD+++ +V+  F+ CA+S+ QCVP R E++   P P  S LVPS  + S  G+W+I+ G+NP+ D F CQ H   V+                                                +   ++++++   G      + FTR+  Q F QD  +PG L+     YL  +DDWYIL  +P++++ ++Y G N AW G+ GGVV++R PS
Sbjct:  115 CLLQNCQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVP-RKEDDGSYPVPADSALVPSFDINSFKGKWYISAGLNPLFDIFDCQVHFFTVQ---------------------------------------------GDKLYGKLNWRITEPDG------EFFTRDTVQRFVQDPKFPGKLYNHDNEYLHYQDDWYILDHEPDQFIAIFYRGQNDAWTGYGGGVVYTRGPS 320          
BLAST of NO20G02350 vs. NCBI_GenBank
Match: XP_009767570.1 (PREDICTED: violaxanthin de-epoxidase, chloroplastic [Nicotiana sylvestris] >XP_009767571.1 PREDICTED: violaxanthin de-epoxidase, chloroplastic [Nicotiana sylvestris] >XP_016456547.1 PREDICTED: violaxanthin de-epoxidase, chloroplastic-like [Nicotiana tabacum] >XP_016456554.1 PREDICTED: violaxanthin de-epoxidase, chloroplastic-like [Nicotiana tabacum])

HSP 1 Score: 146.0 bits (367), Expect = 3.700e-31
Identity = 80/259 (30.89%), Postives = 128/259 (49.42%), Query Frame = 0
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAA----DPERYMFVWYEGCNKAWCGFTGGVVFSRT 539
            CL+  C  EL   + +      + CL TC   P +  CQ++CGD+++  V+  F+ CA+S+ +CVP++ +  +  +PDPS+LV    +   +G+WFIT G+NP  D F CQ H+   E                                                +V ++S+++   +  +G F   FTR+  Q F QD  YPG+L+     YL  +DDWYIL++     PE Y+FV+Y+G N AW G+ G V+++R+
Sbjct:  143 CLLKECRLELAKCIANPACAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPRKSDVGDFPVPDPSVLVQKFDMKDFSGKWFITRGLNPTFDAFDCQLHEFHTE---------------------------------------------ENKLVGNLSWRI---RTPDGGF---FTRSAVQKFVQDPKYPGILYNHDNEYLHYQDDWYILSSKVENSPEDYIFVYYKGRNDAWDGYGGSVLYTRS 350          
BLAST of NO20G02350 vs. NCBI_GenBank
Match: XP_010247237.1 (PREDICTED: violaxanthin de-epoxidase, chloroplastic isoform X1 [Nelumbo nucifera])

HSP 1 Score: 146.0 bits (367), Expect = 3.700e-31
Identity = 81/260 (31.15%), Postives = 131/260 (50.38%), Query Frame = 0
Query:  286 GCLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAA----DPERYMFVWYEGCNKAWCGFTGGVVFSRT 539
            GCL+  C  EL   + +      + CL TC   P +  CQ++CGD+++ +V+  F+ CA+S+ +CVP++ +  E  +PDP+ LV S ++   +G+W+IT G+NP  D F CQ H+  +E                                                +V ++S+++   +  +G F   FTR+  Q F QDS  PG+L+     YL  +DDWYIL++     P+ Y+FV+Y G N AW G+ G VV++R+
Sbjct:  149 GCLLKECRVELAKCIANPSCAANIACLQTCNNRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPRKSDVGEFPIPDPAALVKSFNIADFSGKWYITSGLNPTFDTFDCQLHEFHME---------------------------------------------SNKLVGNLSWRI---RTPDGGF---FTRSTVQRFVQDSNQPGVLYNHDNEYLHYQDDWYILSSRVENRPDDYIFVYYRGRNDAWDGYGGAVVYTRS 357          
BLAST of NO20G02350 vs. NCBI_GenBank
Match: XP_010247238.1 (PREDICTED: violaxanthin de-epoxidase, chloroplastic isoform X2 [Nelumbo nucifera])

HSP 1 Score: 146.0 bits (367), Expect = 3.700e-31
Identity = 81/260 (31.15%), Postives = 131/260 (50.38%), Query Frame = 0
Query:  286 GCLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAA----DPERYMFVWYEGCNKAWCGFTGGVVFSRT 539
            GCL+  C  EL   + +      + CL TC   P +  CQ++CGD+++ +V+  F+ CA+S+ +CVP++ +  E  +PDP+ LV S ++   +G+W+IT G+NP  D F CQ H+  +E                                                +V ++S+++   +  +G F   FTR+  Q F QDS  PG+L+     YL  +DDWYIL++     P+ Y+FV+Y G N AW G+ G VV++R+
Sbjct:   70 GCLLKECRVELAKCIANPSCAANIACLQTCNNRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPRKSDVGEFPIPDPAALVKSFNIADFSGKWYITSGLNPTFDTFDCQLHEFHME---------------------------------------------SNKLVGNLSWRI---RTPDGGF---FTRSTVQRFVQDSNQPGVLYNHDNEYLHYQDDWYILSSRVENRPDDYIFVYYRGRNDAWDGYGGAVVYTRS 278          
BLAST of NO20G02350 vs. NCBI_GenBank
Match: XP_019231506.1 (PREDICTED: violaxanthin de-epoxidase, chloroplastic [Nicotiana attenuata] >XP_019231507.1 PREDICTED: violaxanthin de-epoxidase, chloroplastic [Nicotiana attenuata] >OIT28698.1 violaxanthin de-epoxidase, chloroplastic [Nicotiana attenuata])

HSP 1 Score: 146.0 bits (367), Expect = 3.700e-31
Identity = 80/259 (30.89%), Postives = 128/259 (49.42%), Query Frame = 0
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAA----DPERYMFVWYEGCNKAWCGFTGGVVFSRT 539
            CL+  C  EL   + +      + CL TC   P +  CQ++CGD+++  V+  F+ CA+S+ +CVP++ +  +  +PDPS+LV    +   +G+WFIT G+NP  D F CQ H+   E                                                +V ++S+++   +  +G F   FTR+  Q F QD  YPG+L+     YL  +DDWYIL++     PE Y+FV+Y+G N AW G+ G V+++R+
Sbjct:  143 CLLKECRLELAKCIANPACAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPRKSDVGDFPVPDPSVLVQKFDMKDFSGKWFITRGLNPTFDAFDCQLHEFHTE---------------------------------------------ENKLVGNLSWRI---RTPDGGF---FTRSAVQKFVQDPKYPGILYNHDNEYLHYQDDWYILSSKVENSPEDYIFVYYKGRNDAWDGYGGAVLYTRS 350          
BLAST of NO20G02350 vs. NCBI_GenBank
Match: XP_021623226.1 (violaxanthin de-epoxidase, chloroplastic isoform X1 [Manihot esculenta] >OAY41983.1 hypothetical protein MANES_09G144600 [Manihot esculenta])

HSP 1 Score: 145.6 bits (366), Expect = 4.800e-31
Identity = 80/259 (30.89%), Postives = 126/259 (48.65%), Query Frame = 0
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAADPER----YMFVWYEGCNKAWCGFTGGVVFSRT 539
            CL+  C  EL   + +      + CL TC   P +  CQ++CGD+++  V+  F+ CA+S+ +CVP++ +  E  +PDP++LV S ++   NG+W+IT G+NP  D F CQ H+  VE                                                +V ++S+++        P    FTR+  Q F QD + PG+L+     YL  +DDWYIL++  E     Y+FV+Y G N AW G+ G VV++R+
Sbjct:  148 CLLKECRLELAKCIANPACAANIACLQTCNNRPDETECQIKCGDLFENTVVDEFNECAVSRKKCVPKKSDVGEFPVPDPAVLVKSFNIADFNGKWYITRGLNPTFDTFDCQLHEFHVE---------------------------------------------SNKLVGNISWRI------RTPDSGFFTRSTVQRFVQDPMQPGILYNHDNEYLHYQDDWYILSSKVENKSDDYIFVYYRGRNDAWDGYGGAVVYTRS 355          
BLAST of NO20G02350 vs. NCBI_GenBank
Match: XP_021623227.1 (violaxanthin de-epoxidase, chloroplastic isoform X2 [Manihot esculenta])

HSP 1 Score: 145.6 bits (366), Expect = 4.800e-31
Identity = 80/259 (30.89%), Postives = 126/259 (48.65%), Query Frame = 0
Query:  287 CLVGRCGKELGMALVDFRGMHELTCLVTCG--PSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVPQRVE-EENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALVELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPGSVSSPPPSLRPSIVFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQEDDWYILAADPER----YMFVWYEGCNKAWCGFTGGVVFSRT 539
            CL+  C  EL   + +      + CL TC   P +  CQ++CGD+++  V+  F+ CA+S+ +CVP++ +  E  +PDP++LV S ++   NG+W+IT G+NP  D F CQ H+  VE                                                +V ++S+++        P    FTR+  Q F QD + PG+L+     YL  +DDWYIL++  E     Y+FV+Y G N AW G+ G VV++R+
Sbjct:  142 CLLKECRLELAKCIANPACAANIACLQTCNNRPDETECQIKCGDLFENTVVDEFNECAVSRKKCVPKKSDVGEFPVPDPAVLVKSFNIADFNGKWYITRGLNPTFDTFDCQLHEFHVE---------------------------------------------SNKLVGNISWRI------RTPDSGFFTRSTVQRFVQDPMQPGILYNHDNEYLHYQDDWYILSSKVENKSDDYIFVYYRGRNDAWDGYGGAVVYTRS 349          
The following BLAST results are available for this feature:
BLAST of NO20G02350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CEM35152.19.300e-5139.31unnamed protein product [Vitrella brassicaformis C... [more]
XP_019198311.15.100e-3332.43PREDICTED: violaxanthin de-epoxidase, chloroplasti... [more]
KZV37303.11.600e-3130.38hypothetical protein F511_16452 [Dorcoceras hygrom... [more]
ANT70525.12.800e-3130.62violaxanthin de-epoxidase [Nannochloropsis oceanic... [more]
XP_009767570.13.700e-3130.89PREDICTED: violaxanthin de-epoxidase, chloroplasti... [more]
XP_010247237.13.700e-3131.15PREDICTED: violaxanthin de-epoxidase, chloroplasti... [more]
XP_010247238.13.700e-3131.15PREDICTED: violaxanthin de-epoxidase, chloroplasti... [more]
XP_019231506.13.700e-3130.89PREDICTED: violaxanthin de-epoxidase, chloroplasti... [more]
XP_021623226.14.800e-3130.89violaxanthin de-epoxidase, chloroplastic isoform X... [more]
XP_021623227.14.800e-3130.89violaxanthin de-epoxidase, chloroplastic isoform X... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G02350.1NO20G02350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595121gene_6462Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G02350.1NO20G02350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G02350 ID=NO20G02350|Name=NO20G02350|organism=Nannochloropsis oceanica|type=gene|length=3400bp
CACAGGCACACAAGCGTGCAGGCAACATGTGTGCAGGGACAAGGGTAAAG
GTGGCGAGCGTCTTTTCCCTTCCTCCCTCTTTAGCAGTATCAGCACCACC
ACCATCCTCCTTCTCCTCCTCAACGGGATTGGACACCACGGCCAGCAGCT
TTTCGCCCTCTTCCACAAGGCAAATTAAACCACGGAGGGCGCGCAAGCAG
CACAAAAATCACACACTTGTCCTAGCAACGGTGGCAGCACTCGTTGGAGG
GAGAGATAGAGGCGTCGATGGCGCCTTTATTGGAGTAGGAAGTGGCGTGG
TGTGTGGGGGGAGGAGACGAGGAGGGGAGGAGCTAGGTCCATGGCAGTCA
GCCACGCCTACCTCTCTCAATGACGATGGTGGGTCTGCCGAAATATGCCT
AAGCACGACGACAAGCAAGTGGCGGAGACGAGGAAGGATGGCCACGGCAG
TGGCATCATCATCACCACCACCACGATCTTCTTGTTCCTCCTCCATTCGG
CCAGATTCGGCTACCGCCACCCCGTCTTTTTCATCGTCATCATCCTCCTC
CTCCCGTCCCTCCTCATCTCCCTTTCCTTCCTCCTCCACGTCCTCCTGTT
GGGCCTGGCCACTAATCCTTCCCCCTCTCTCCCTCCCCTCCCTCCCTCGC
CGGCTTCTCCCCCTCCTTGCCGCCTATCTCCCCTCCTTCCTCGCTCCCTC
CTTCCCTTTCTCCTTCTCATTATCCTCCTCCTCCTTTTCCTCCTCCATTG
TTGCTGCTGCTGCCGGTGGAGGTGGAGGTGGTGGTGGAGGACAGGAGCGA
GAGGCCGTGAGTCTAGAATATCTCCATCGTCGAAGCGGGAGGGAGGGAGG
GAGGGCGGGAGGGAAGACGGGCATCGATTACGGCTGCCTGGTAGGTCGTT
GTGGGAAGGAGCTTGGGATGGCATTGGTGGATTTCCGgtaaggaggggag
gaagggagggagggagggagggagggtcttttttcaattccgacgtaagt
catgtggcacatgtaatcatttttcctccctcctcttccttcctttcctt
ttctttccttcctcccttctctttttcttcctctttccttcaacctcacg
tgaacgcacgcacgcatgtatctcacacccacccccacgcccacagGGGG
ATGCATGAATTGACTTGCCTCGTAACATGCGGTCCTTCCGACTTGGCCTG
TCAGgtacataggccctccctccctccctccctccctccctccctccctc
cctctctatcaatcttgccgctttccctctttctctccctccctctcaaa
tctccctccgtatgtcctcagtctccgtccggaccttccccccattcctc
cttccacatcacccaaccctccctcctccctccctccctcctccctccct
ccctccctccccccctcgctagATGCGGTGCGGCGACATGTACAAGATGG
ACGTCCTTCAAAACTTCCACACGTGTGCCATCAGCCAGCACCAATGCGTG
CCGCAACGAGTGGAAGAAGAAAATAAGgcaagccctccctccctccctcc
ctccttccctccctcccttcctccctccctccccttcttccgccgtgtta
gatcacctgctttcctgcttgtattctaaagaacattcagattttgaata
ccatctcacatccctccctccctccctctcgcccgcccgccctctatggc
agCTCCCCGACCCCTCCCTCCTTGTTCCCTCCCTCTCCCTCCCCTCCCTC
AACGGCGAGTGGTTCATCACCCACGGCATTAACCCCATCATGGACTGTTT
TCCCTGTCAGCACCATCAGgtgggtgggtaggtcgggaggtagggaggta
ggaaggtatagagagactgagaggcgcacgccctgcctgcattcttttcc
ctcctttcttccctccgtcactccctccctccctccctccctctctccct
ctctccatttgccatgacgagggtacttttcgcaaaagctgatcttctaa
gccttgcctccctccctccctccctccctcccgcccgcccgcccgcccgc
ccgccctcccaccttcctcccctccttcagGCGCTGGTCGAGCTCCCTCC
CTCTTCTCCTATCCTCCTCCACTCCTCCAGCACCACCAAGCAGCAGCAAT
CACATCAACCTCTATCATCGCAACAAGAAGGAGGCAAAGGGGTTCCAGGC
AGTGTCTCTTCCCCCCCTCCCTCCCTCCGTCCCTCCATCGTTTTTGACGT
TTCCTATCAGGTGTCTCATGACCAGGGGAAGGAAGGTCCTTTTCTTCAAA
CGTTCACACGGAATCTCCAGCAGCATTTCACGCAGgtacgccctccctcc
ctccttccttcccttccttccatctcttccttccgtcctcctcacccctc
tatccccctcctctttcctccttccttccctccctccctttcctcttccc
ccccccttgctcacccccctcctcttccctccctccctccctccctccct
ccccttcttcttttctattcctcccacccccttcctctttcttcctttcc
tccctctcttcttccctcctctccatccctctcactcccctcctctttct
tccctcccctcctccctcccttcctccctcccccagGATTCTCTTTACCC
CGGCCTCCTCCACGCTCGAGCTCAAGGCTATCTCCAACAAGAAGACGATT
GGTACATTCTGGCTGCTGATCCCGAACGgtaagtctccctcccttcctcc
ctccctccttccctctatgcctgcctgcctgtcgtgcattgattctttcc
aaattctcacgttcctccctctctccttcccccccttccctccctccctc
tctcagCTACATGTTTGTCTGGTATGAGGGTTGCAACAAGGCCTGGTGTG
GTTTTACCGGTGGCGTCGTTTTTTCCCGCACCCCCTCCCTTCCTCCTTCC
CTCTACCCTTCCCTCGAGGAGACGGCGCGCAAGGTGGGGGTGAAGGGAGG
GATCGAGGGCATGTGCAAAGTGGACAACACTCAGTGTAATTTGAAGTAAA
GGGTGCAAACTCTCCCTCTCTCCCTTCCTCCCTCCTCTTCTTCCTTGCGT
GAGCGGGGAGGAGGATGGAGAAGAGGGCGAGGAGAAGTAGGAGAAGGAGG
AGAGGAACGAGGAATAGGAAGACGGTGACGACGTTGATGGTGGTCCTTCT
GTGAAGAGGATTAATAGAAAAGTAGATGAAAGAAGTGGAGAAAAGTGATT
TGGCGGGGAGAAGAGAATGAGGAGGGGGGGGGTAAAGGGTGTACAAGGAA
AAGAAAGGAAGCAAGACATTGCCAGTAGCATAGAAGCATGCAAATATAGG
TTAGAAAAATGAATCAACGACCCCTTACTTTGGACACCTGCGTGTAAATC
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protein sequence of NO20G02350.1

>NO20G02350.1-protein ID=NO20G02350.1-protein|Name=NO20G02350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=577bp
MCAGTRVKVASVFSLPPSLAVSAPPPSSFSSSTGLDTTASSFSPSSTRQI
KPRRARKQHKNHTLVLATVAALVGGRDRGVDGAFIGVGSGVVCGGRRRGG
EELGPWQSATPTSLNDDGGSAEICLSTTTSKWRRRGRMATAVASSSPPPR
SSCSSSIRPDSATATPSFSSSSSSSSRPSSSPFPSSSTSSCWAWPLILPP
LSLPSLPRRLLPLLAAYLPSFLAPSFPFSFSLSSSSFSSSIVAAAAGGGG
GGGGGQEREAVSLEYLHRRSGREGGRAGGKTGIDYGCLVGRCGKELGMAL
VDFRGMHELTCLVTCGPSDLACQMRCGDMYKMDVLQNFHTCAISQHQCVP
QRVEEENKLPDPSLLVPSLSLPSLNGEWFITHGINPIMDCFPCQHHQALV
ELPPSSPILLHSSSTTKQQQSHQPLSSQQEGGKGVPGSVSSPPPSLRPSI
VFDVSYQVSHDQGKEGPFLQTFTRNLQQHFTQDSLYPGLLHARAQGYLQQ
EDDWYILAADPERYMFVWYEGCNKAWCGFTGGVVFSRTPSLPPSLYPSLE
ETARKVGVKGGIEGMCKVDNTQCNLK*
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Synonyms
Publications