NO20G02320, NO20G02320 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G02320 vs. NCBI_GenBank
Match: CBN79940.1 (peptidyl prolyl cis/trans isomerase like [Ectocarpus siliculosus]) HSP 1 Score: 200.3 bits (508), Expect = 1.500e-47 Identity = 99/213 (46.48%), Postives = 141/213 (66.20%), Query Frame = 0 Query: 332 RASHILVKTEEEADALLAVLENGADFGELAMLESDCPSRKQGGDLGWFGAGQMVPAFEEACFTNDPGAFVKVQTEFGYHIIQVTGKATGPGDWHPSQLGDLLKEGKEATKDV----QLIDVREPDELLRADITGAGFLNLPLSQFPSWREKILSGE--LLDKSKKTIVLCHHGGRSMQVASFLTGQAGFESVFNLSGGINMYSQLVDDSIPMY 539 RA+H+L E+ A+A L +++G FG++A S CPS+ +GGDLGWF GQMV FE ACF NDPG VKVQT+FG+H++ + +A P +LG++L+ K DV Q +DVRE +EL +A + GF+NLPLS+F W +K LSGE +LD K T+++CHHG RS Q+A L +AGF+ V+N+ GG++ Y+ VD S+ +Y Sbjct: 99 RAAHVLCADEDAAEAALTRIKSGEQFGDVATDMSSCPSKDKGGDLGWFKKGQMVAEFEAACFENDPGTIVKVQTQFGWHVVALLSRAILPRQMAVEELGEILELAKSGAGDVDSKYQFVDVREEEELGKAKLD--GFVNLPLSKFEEWSDK-LSGEGAILDAEKDTVIMCHHGMRSNQMAQHLATKAGFKRVWNVEGGLHAYASHVDSSVGVY 308
BLAST of NO20G02320 vs. NCBI_GenBank
Match: XP_005707513.1 (peptidyl-prolyl cis-trans isomerase C [Galdieria sulphuraria] >EME30993.1 peptidyl-prolyl cis-trans isomerase C [Galdieria sulphuraria]) HSP 1 Score: 199.5 bits (506), Expect = 2.600e-47 Identity = 105/208 (50.48%), Postives = 135/208 (64.90%), Query Frame = 0 Query: 331 VRASHILVKTEEEADALLAVLENGADFGELAMLESDCPSRKQGGDLGWFGAGQMVPAFEEACFTNDPGAFVKVQTEFGYHIIQVTGKATGPGDWHPSQLGDLLKEGKEATKDVQLIDVREPDELLRADITGAGFLNLPLSQFPSWREKILSGELLDKSKKTIVLCHHGGRSMQVASFLTGQAGFESVFNLSGGINMYSQLVDDSIPMY 539 VRA HILV+TE AD LL L+NG F ELA S CPS+++GG+LGWF G MV +FE+ACF P +K+QTE+G+H+IQV G+A PG + D K VQL+DVRE +EL A + F +LPL ++ W E++ SGELLDK K+TIV+CHHG RS Q+ S+L Q GF V NL GGI+ Y+ VD SI +Y Sbjct: 13 VRARHILVETEGMADTLLEQLKNGQHFAELAKAVSRCPSKERGGELGWFRRGTMVASFEDACFQGKPDQLIKIQTEYGWHVIQVQGQAIEPGS---ITVEDFAKIYPHQISHVQLVDVREQNELELARLD--HFFHLPLGEYEKWAEQVESGELLDKEKETIVMCHHGIRSAQMCSYL-AQQGFLKVRNLIGGIDAYAHQVDPSIGVY 214
BLAST of NO20G02320 vs. NCBI_GenBank
Match: XP_005715195.1 (unnamed protein product [Chondrus crispus] >CDF35376.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 171.8 bits (434), Expect = 5.800e-39 Identity = 102/235 (43.40%), Postives = 141/235 (60.00%), Query Frame = 0 Query: 313 SSSTRLMAGAAAPDPR---IKVRASHILVKTEEEADALLAVLENG-ADFGELAMLESDCPSRKQGGDLGWFGAGQMVPAFEEACFTNDPGAFVKVQTEFGYHIIQVT--GKATGPGD--WHPSQLGDLLKEGKEATKDVQLIDVREPDELLRADITGAGFLNLPLSQFPSWREKILSGEL-LDKSKKTIVLCHHGGRSMQVASFLTGQAGFESVFNLSGGINMYSQLVDDSIPMY 539 S S R+M+G + VRA HILV+TE+ DA+ +++G F ELA L S C S+ +GGDLGWF MV FE A F N PG+ +KV++EFG+H+I+V G A P + + G+ +T DVQ ID RE +EL A + GF++LP+ ++ W +K GEL LDK+K+TIV+CHHG RS FL+ Q GF V NL GGI+ Y++ +D S+P Y Sbjct: 35 SLSPRMMSGPPRTEDMKQPTMVRARHILVETEDMLDAVKKQIDDGKGSFAELAGLVSTCTSKGRGGDLGWFRRNTMVKEFETAAFENPPGSILKVKSEFGWHLIRVEEHGLAERPITIVEYDERFGEKATGNTGSTDDVQRIDCREANELEIASL--KGFMHLPMGEYGKWADKFEKGELHLDKNKETIVMCHHGIRSANFCFFLS-QQGFTKVRNLIGGIDAYARKIDPSVPTY 266
BLAST of NO20G02320 vs. NCBI_GenBank
Match: KHN12035.1 (Foldase protein prsA 1 [Glycine soja]) HSP 1 Score: 166.8 bits (421), Expect = 1.900e-37 Identity = 106/248 (42.74%), Postives = 147/248 (59.27%), Query Frame = 0 Query: 299 VSSPLSP--SFLPPAFSSSTRLMA-GAAAPDPRIKVRASHILVKTEEEADALLAV---LENGADFGELAMLESDCPSRKQGGDLGWFGAGQMVPAFEEACFTNDPGAFVKVQTEFGYHIIQVTGKATGP--GDWHPSQLGDLLKEGKEATKDVQLIDVREPDELLRADITGAGFLNLPLSQFPSWREKILSGELLDKSKKTIVLCHHGGRSMQVASFLTGQAGFESVFNLSGGINMYSQLVDDSIPMY 539 +S PLSP F+PP ++S A GAA D ++ H+LVK E++ LL + + +G D +LA+ S CPS+++GG LGW GQMVP FEEA FT V+ +T+FG+H++QV + D P +L +++ + QLIDVREPDE+ +A + GF LPL QF SW +I + D K T V+CHHG RS+QVA +L Q GF V+NLSGGI+ Y+ VD S+P Y Sbjct: 51 LSLPLSPFVLFMPPKATASYGTGASGAAEGDRPREILVQHLLVK-EDDQKLLLYLQQKISSGEDLSDLAVEYSLCPSKEEGGMLGWVRKGQMVPEFEEAAFTAPLNQVVRCKTKFGWHLLQVLSEREESILQDIQPDELHMKIQD-PSFLDEAQLIDVREPDEVAKASL--PGFTVLPLRQFGSWGPEITT--KFDPQKDTYVMCHHGMRSLQVAKWLQSQ-GFRKVYNLSGGIHAYAVQVDPSVPTY 291
BLAST of NO20G02320 vs. NCBI_GenBank
Match: KRH14590.1 (hypothetical protein GLYMA_14G035700 [Glycine max]) HSP 1 Score: 166.8 bits (421), Expect = 1.900e-37 Identity = 106/248 (42.74%), Postives = 147/248 (59.27%), Query Frame = 0 Query: 299 VSSPLSP--SFLPPAFSSSTRLMA-GAAAPDPRIKVRASHILVKTEEEADALLAV---LENGADFGELAMLESDCPSRKQGGDLGWFGAGQMVPAFEEACFTNDPGAFVKVQTEFGYHIIQVTGKATGP--GDWHPSQLGDLLKEGKEATKDVQLIDVREPDELLRADITGAGFLNLPLSQFPSWREKILSGELLDKSKKTIVLCHHGGRSMQVASFLTGQAGFESVFNLSGGINMYSQLVDDSIPMY 539 +S PLSP F+PP ++S A GAA D ++ H+LVK E++ LL + + +G D +LA+ S CPS+++GG LGW GQMVP FEEA FT V+ +T+FG+H++QV + D P +L +++ + QLIDVREPDE+ +A + GF LPL QF SW +I + D K T V+CHHG RS+QVA +L Q GF V+NLSGGI+ Y+ VD S+P Y Sbjct: 51 LSLPLSPFVLFMPPKATASYGTGASGAAEGDRPREILVQHLLVK-EDDQKLLLYLQQKISSGEDLSDLAVEYSLCPSKEEGGMLGWVRKGQMVPEFEEAAFTAPLNQVVRCKTKFGWHLLQVLSEREESILQDIQPDELHMKIQD-PSFLDEAQLIDVREPDEVAKASL--PGFTVLPLRQFGSWGPEITT--KFDPQKDTYVMCHHGMRSLQVAKWLQSQ-GFRKVYNLSGGIHAYAVQVDPSVPTY 291
BLAST of NO20G02320 vs. NCBI_GenBank
Match: GAQ88539.1 (hypothetical protein KFL_004370090 [Klebsormidium nitens]) HSP 1 Score: 165.6 bits (418), Expect = 4.200e-37 Identity = 97/226 (42.92%), Postives = 131/226 (57.96%), Query Frame = 0 Query: 318 LMAGAAAPDPRIKVRASHILVKTEEE---ADALLAVLENGADFGELAMLESDCPSRKQGGDLGWFGAGQMVPAFEEACFTNDPGAFVKVQTEFGYHIIQVTG--KATGPGDWHPSQLGDLLKEGKEATKDVQLIDVREPDELLRADITGAGFLNLPLSQFPSWREKILSGELLDKSKKTIVLCHHGGRSMQVASFLTGQAGFESVFNLSGGINMYSQLVDDSIPMY 539 + +G A D + ++ HILVK E+E D +L NG D G LA S CPS+K GG LGW G +VP FEEA F VKV+T+FG+H++QV +A P LK+G DVQL+DVREP E+ ++ + GF PLS+F W + LD K+TIV+CHHG RS+Q A++L Q GF+ V NL+GGI+ YS+ VD ++P Y Sbjct: 1 MASGGATSDQKREIMVQHILVKEEDEKVLTDLQKRILMNGEDLGALATEYSVCPSKKDGGMLGWIKKGMLVPEFEEAAFAAKLNRPVKVKTKFGWHLLQVLSEREANEVIPMAPEDFQARLKDG--LPDDVQLMDVREPHEVEKSSL--PGFKVYPLSKFGEWAPAL----DLDPKKETIVMCHHGMRSLQAATWLV-QQGFKDVKNLTGGIDYYSKTVDPTVPQY 217
BLAST of NO20G02320 vs. NCBI_GenBank
Match: NP_001240041.1 (uncharacterized protein LOC100803404 [Glycine max] >ACU18465.1 unknown [Glycine max] >KRH73536.1 hypothetical protein GLYMA_02G279000 [Glycine max]) HSP 1 Score: 165.2 bits (417), Expect = 5.500e-37 Identity = 106/247 (42.91%), Postives = 144/247 (58.30%), Query Frame = 0 Query: 300 SSPLSP--SFLPPAFSSSTRLMAGAAAPDPRIK-VRASHILVKTEEEADALLAV---LENGADFGELAMLESDCPSRKQGGDLGWFGAGQMVPAFEEACFTNDPGAFVKVQTEFGYHIIQVTGKATGP--GDWHPSQLGDLLKEGKEATKDVQLIDVREPDELLRADITGAGFLNLPLSQFPSWREKILSGELLDKSKKTIVLCHHGGRSMQVASFLTGQAGFESVFNLSGGINMYSQLVDDSIPMY 539 S PLSP F+PP ++S A AAA R + + H+LVK E++ LL + + +G D +LA+ S CPS+++GG LGW GQMVP FEEA FT V +T+FG+H++QV + D P +L +++ QLIDVREP+E+ +A + GF LPL QF SW +I + D K T VLCHHG RS+QVA +L Q GF V+NLSGGI+ Y+ VD S+P Y Sbjct: 53 SLPLSPFVPFMPPKATASYGTGASAAAEGDRPREILVQHLLVK-EDDQKLLLDIQQRISSGEDLSDLAVEYSLCPSKEEGGMLGWVRKGQMVPEFEEAAFTAPLNKVVSCKTKFGWHLLQVLSEREESILQDIQPDELHVKIQD-PSFFDGAQLIDVREPEEVAKASL--PGFTVLPLRQFGSWGPEITT--KFDPQKDTYVLCHHGMRSLQVAKWLQSQ-GFRKVYNLSGGIHAYAVQVDPSVPTY 292
BLAST of NO20G02320 vs. NCBI_GenBank
Match: NP_001276250.1 (rhodanese-like/PpiC domain-containing protein 12-like [Glycine max] >ACU19817.1 unknown [Glycine max]) HSP 1 Score: 165.2 bits (417), Expect = 5.500e-37 Identity = 105/248 (42.34%), Postives = 147/248 (59.27%), Query Frame = 0 Query: 299 VSSPLSP--SFLPPAFSSSTRLMA-GAAAPDPRIKVRASHILVKTEEEADALLAV---LENGADFGELAMLESDCPSRKQGGDLGWFGAGQMVPAFEEACFTNDPGAFVKVQTEFGYHIIQVTGKATGP--GDWHPSQLGDLLKEGKEATKDVQLIDVREPDELLRADITGAGFLNLPLSQFPSWREKILSGELLDKSKKTIVLCHHGGRSMQVASFLTGQAGFESVFNLSGGINMYSQLVDDSIPMY 539 +S PLSP F+PP ++S A GAA D ++ H+LVK E++ LL + + +G D +LA+ S CPS+++GG LGW GQMVP FEEA FT V+ +T+FG+H++QV + D P +L +++ + QLIDVREPDE+ +A + GF LPL QF SW +I + D K T V+CHHG RS++VA +L Q GF V+NLSGGI+ Y+ VD S+P Y Sbjct: 51 LSLPLSPFVLFMPPKATASYGTGASGAAEGDRPREILVQHLLVK-EDDQKLLLYLQQKISSGEDLSDLAVEYSLCPSKEEGGMLGWVRKGQMVPEFEEAAFTAPLNQVVRCKTKFGWHLLQVLSEREESILQDIQPDELHMKIQD-PSFLDEAQLIDVREPDEVAKASL--PGFTVLPLRQFGSWGPEITT--KFDPQKDTYVMCHHGMRSLRVAKWLQSQ-GFRKVYNLSGGIHAYAVQVDPSVPTY 291
BLAST of NO20G02320 vs. NCBI_GenBank
Match: XP_021843344.1 (rhodanese-like/PpiC domain-containing protein 12, chloroplastic [Spinacia oleracea]) HSP 1 Score: 162.9 bits (411), Expect = 2.700e-36 Identity = 102/253 (40.32%), Postives = 151/253 (59.68%), Query Frame = 0 Query: 300 SSPLSPSFLPPAFSSSTRLM---------AGAAAPDPRIKVRASHILVKTEEEADALLAV---LENGADFGELAMLESDCPSRKQGGDLGWFGAGQMVPAFEEACFTNDPGAFVKVQTEFGYHIIQVTGKATGP--GDWHPSQLGDLLKEGKEATKDVQLIDVREPDELLRADITGAGFLNLPLSQFPSWREKILSGELLDKSKKTIVLCHHGGRSMQVASFLTGQAGFESVFNLSGGINMYSQLVDDSIPMY 539 SS LS S L FSSS +M G+++ R ++ H+LVK E + + L+ + + G D +LA+ S CPS+++GG LGW GQMVP FEEA F+ V+ +T+FG+H++QV + G G+ S+L + +++ + T+ QLIDVREP+E+ +A + GF LPL QF +W +I + D + T V+CHHG RSMQVA +L Q GF+ VFN++GGI+ Y+ VD S+P Y Sbjct: 80 SSILSVSPLSGCFSSSPTMMGRPSFKAFSTGSSSGGNR-EILVQHLLVK-ENDLNLLVELQKRIAGGEDLSDLAVEHSICPSKQEGGSLGWVNKGQMVPEFEEAAFSAPLDKVVRCKTKFGWHLLQVVSEREGSLLGEVQVSELQEKMQD-PDFTEKAQLIDVREPEEIAKASL--PGFQVLPLQQFGTWGPEITT--KFDPQQDTYVMCHHGMRSMQVARWLQTQ-GFKKVFNITGGIHAYAVNVDPSVPTY 324
BLAST of NO20G02320 vs. NCBI_GenBank
Match: XP_010031715.1 (PREDICTED: rhodanese-like/PpiC domain-containing protein 12, chloroplastic [Eucalyptus grandis]) HSP 1 Score: 162.5 bits (410), Expect = 3.500e-36 Identity = 93/209 (44.50%), Postives = 129/209 (61.72%), Query Frame = 0 Query: 335 HILVKTEEEADALLAV---LENGADFGELAMLESDCPSRKQGGDLGWFGAGQMVPAFEEACFTNDPGAFVKVQTEFGYHIIQVTGKATGP--GDWHPSQLGDLLKEGKEATKDVQLIDVREPDELLRADITGAGFLNLPLSQFPSWREKILSGELLDKSKKTIVLCHHGGRSMQVASFLTGQAGFESVFNLSGGINMYSQLVDDSIPMY 539 H+L+K E + + LL + + G D +LA+ S CPS++QGG LGW GQMVP FEEA F+ VK +T+FG+H++QV + G D P +L +++ ++ QL+DVREP+E+ +A + GF LPL QF SW +I + LD K T V+CHHG RS+QVA +L Q GF+ VFNLSGGI+ Y+ D SIP Y Sbjct: 96 HLLIK-ENDLNLLLELQQRISAGEDLSDLAVEHSICPSKEQGGMLGWVTMGQMVPEFEEAAFSAPMNKVVKCKTKFGWHLLQVLSEREGSVLQDIQPDELHAKMQD-PNFLEEAQLVDVREPEEVAKASL--PGFQVLPLRQFGSWGPEITT--KLDTEKDTYVMCHHGMRSLQVAKWLQAQ-GFKRVFNLSGGIHEYAVKADPSIPTY 297 The following BLAST results are available for this feature:
BLAST of NO20G02320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G02320 ID=NO20G02320|Name=NO20G02320|organism=Nannochloropsis oceanica|type=gene|length=3019bpback to top protein sequence of NO20G02320.1 >NO20G02320.1-protein ID=NO20G02320.1-protein|Name=NO20G02320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=539bpback to top Synonyms
Publications
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