NO20G02210, NO20G02210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G02210 vs. NCBI_GenBank
Match: EWM22011.1 (ankyrin repeat domain protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 366.7 bits (940), Expect = 1.200e-97 Identity = 191/281 (67.97%), Postives = 219/281 (77.94%), Query Frame = 0 Query: 45 EARQAAEARAALVEQMIEASKEGNVAVAHALLLQDPTLASCRDSVGQSPLMWAAYKGYTALAVLLIQTNAPVDDHDCQSSRSALYMACEFGNWPVASLLLQHGANPSFRRQLYGRTCLQIAAYNNHAHVVQGVLAFAASCPPSCPTPCVVDVNAVDNHGSTALHLAIREDPQQAISLHPS-NASSSSFDISDTVRVLLSWGADPLIPNLAGALPVTAAQRLQHAKCLSLLTGWERMALVHKARLCVTEARQMEAHVAMEFAALGRKEEKRQRNEWGEVREE 325 E QA E RAA+ EQMIEASKEG+V++A LL QDP+LA CRDSVGQSPLMWAAYKG+ LA LLI+ AP+DDHDCQSSRSALYMACEFGNW VA+LLLQHGA+PSFRRQLYGRTCLQIAAYNNHAHVVQGVL FAA P PC VD+NAVDNHGSTALHLAIR+D LHP A+S+ DIS+TVR+LL WGADPL+P+ G LP+ AA RL H +C++LL WER ALVHKAR C+ EAR +E E A LG KE+ R+R W E ++E Sbjct: 53 EYAQAMEDRAAMAEQMIEASKEGHVSMADGLLRQDPSLALCRDSVGQSPLMWAAYKGHAELASLLIKAGAPLDDHDCQSSRSALYMACEFGNWAVAALLLQHGADPSFRRQLYGRTCLQIAAYNNHAHVVQGVLHFAAFSSRG-PGPCRVDINAVDNHGSTALHLAIRDD-----HLHPPFQATSAVLDISETVRILLQWGADPLLPDHTGGLPLAAAHRLGHKRCIALLANWERAALVHKARWCLREARLLEVEARAESAMLGPKEDGRRRRLWREAQQE 327
BLAST of NO20G02210 vs. NCBI_GenBank
Match: KVH94625.1 (Ankyrin repeat-containing protein [Cynara cardunculus var. scolymus]) HSP 1 Score: 80.1 bits (196), Expect = 2.200e-11 Identity = 70/256 (27.34%), Postives = 114/256 (44.53%), Query Frame = 0 Query: 60 MIEASKEGNVAVAHALLLQDPTLASCRDSVGQ-SPLMWAAYKGYTALAVLLIQTNAPVDDHDCQSSRSALYMACEFGNWPVASLLLQHGANPSFRRQLYGRTCLQIAAYNNHAHVVQGVLAFAASCPPSCPTPCVVDVNAVDNHGSTALHLAIREDPQQAISLHPSNASSSSFDISDTVRVLLSWGADPLIPNLAGALPVTAAQRLQHAKCLSLLTGWERMALVHKARLCVTEARQMEAHVAMEFAAL--GRKEEK 313 + A + G++ + +L +DP+L + S L AA G + +L++ + D + ++ L +A G L+Q GAN L GRTCL AAY H+ +Q +L+ A + + VN D G+T LHLA R+ + + + N S D +R LL+WGAD L + +G +P A + ++ C +LL LV + L +A +E A + R+ EK Sbjct: 15 LFTAVQFGDLEIVKTVLDRDPSLIQQTTVYDRHSALHIAAANGQIEMVSMLLENPSVNPDSLNRHKQTPLMLAAMHGKITCVEKLIQAGANILMFDSLNGRTCLHYAAYYGHSDCLQTILSSARTSHVAVSWGFSRFVNIRDGKGATPLHLASRQRRPECVHILLDNGGS-----IDCIRELLAWGADRLNRDASGRIPYAVALKHKNGACAALLNPSSAEPLVWPSPLKFISELNQDAKALLEQALMEVNREREK 265
BLAST of NO20G02210 vs. NCBI_GenBank
Match: XP_010255493.1 (PREDICTED: E3 ubiquitin-protein ligase XBAT33-like isoform X2 [Nelumbo nucifera]) HSP 1 Score: 76.3 bits (186), Expect = 3.200e-10 Identity = 72/255 (28.24%), Postives = 113/255 (44.31%), Query Frame = 0 Query: 58 EQMIEASKEGNVAVAHALLLQDPTLASCRDSVG-QSPLMWAAYKGYTALAVLLIQTNAPVDDHDCQSSRSALYMACEFGNWPVASLLLQHGANPSFRRQLYGRTCLQIAAYNNHAHVVQGVLAFAASCPPSCPTPCVVD------------------------VNAVDNHGSTALHLAIR----EDPQQAISLHPSNAS-----SSSFDI----------------SDTVRVLLSWGADPLIPNLAGALPVTAAQ 263 E+++ A+++G++ A LL +P LA G SPL +AA KG+ +A LL++ A V+ + ++AL AC +G+W V LL + +N + L GRT L AA N HA ++ V+ A PS P V+ VN + G TALH+A + Q + +H S +S +S D+ + ++LL+ GA L N G LP+ A+ Sbjct: 12 ERLVSAARDGDLVEAKMLLEFNPCLARYSTFGGLNSPLHFAAAKGHNEIASLLLENGADVNSRN-YCGQTALMQACRYGHWEVVQTLLLYRSNVTRADYLSGRTALHFAAVNGHARCIRLVV---ADFVPSVPYEVVISQITGDRGDGSNLRNKYDQNVLSKFVNKAADGGITALHMAALNGYFDCVQLLLDIHASVSSVTFHYGTSMDLIGAGSTPLHYAACGGNLKSCQILLARGASRLTLNCNGWLPLDVAR 262
BLAST of NO20G02210 vs. NCBI_GenBank
Match: XP_019053126.1 (PREDICTED: E3 ubiquitin-protein ligase XBAT33-like isoform X1 [Nelumbo nucifera] >XP_019053127.1 PREDICTED: E3 ubiquitin-protein ligase XBAT33-like isoform X1 [Nelumbo nucifera]) HSP 1 Score: 76.3 bits (186), Expect = 3.200e-10 Identity = 72/255 (28.24%), Postives = 113/255 (44.31%), Query Frame = 0 Query: 58 EQMIEASKEGNVAVAHALLLQDPTLASCRDSVG-QSPLMWAAYKGYTALAVLLIQTNAPVDDHDCQSSRSALYMACEFGNWPVASLLLQHGANPSFRRQLYGRTCLQIAAYNNHAHVVQGVLAFAASCPPSCPTPCVVD------------------------VNAVDNHGSTALHLAIR----EDPQQAISLHPSNAS-----SSSFDI----------------SDTVRVLLSWGADPLIPNLAGALPVTAAQ 263 E+++ A+++G++ A LL +P LA G SPL +AA KG+ +A LL++ A V+ + ++AL AC +G+W V LL + +N + L GRT L AA N HA ++ V+ A PS P V+ VN + G TALH+A + Q + +H S +S +S D+ + ++LL+ GA L N G LP+ A+ Sbjct: 12 ERLVSAARDGDLVEAKMLLEFNPCLARYSTFGGLNSPLHFAAAKGHNEIASLLLENGADVNSRN-YCGQTALMQACRYGHWEVVQTLLLYRSNVTRADYLSGRTALHFAAVNGHARCIRLVV---ADFVPSVPYEVVISQITGDRGDGSNLRNKYDQNVLSKFVNKAADGGITALHMAALNGYFDCVQLLLDIHASVSSVTFHYGTSMDLIGAGSTPLHYAACGGNLKSCQILLARGASRLTLNCNGWLPLDVAR 262
BLAST of NO20G02210 vs. NCBI_GenBank
Match: XP_011030078.1 (PREDICTED: E3 ubiquitin-protein ligase XBAT33-like isoform X1 [Populus euphratica]) HSP 1 Score: 74.7 bits (182), Expect = 9.200e-10 Identity = 61/209 (29.19%), Postives = 96/209 (45.93%), Query Frame = 0 Query: 58 EQMIEASKEGNVAVAHALLLQDPTLASCRDSVG-QSPLMWAAYKGYTALAVLLIQTNAPVDDHDCQSSRSALYMACEFGNWPVASLLLQHGANPSFRRQLYGRTCLQIAAYNNHAHVVQGVLA-FAASCPPSCPTPCVVD--------------------VNAVDNHGSTALHLAIR----EDPQQAISLHPSNASSSSFDISDTVRVL 241 E+++ A+++G++ A LL +P LA G SPL +AA KG+ + LL++ A V+ + ++AL AC +G+W V LL N + L GRT L AA N HA ++ V+A F S P C+ VN + G TALH+ + Q + +H +N SS +F T+ ++ Sbjct: 12 ERLVSAARDGDLVEARMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVGLLLENGADVNSRN-YCGQTALMQACRYGHWEVVQTLLLFRCNVTRADYLNGRTALHFAAVNGHARCIRLVVADFVPSAPFEAMHACIEGDTGDGSSEKNRFDQSALSRFVNKAADGGITALHMVALNGYFDCVQLLLDIH-ANVSSETFHYGTTMDLI 218
BLAST of NO20G02210 vs. NCBI_GenBank
Match: XP_011012367.1 (PREDICTED: E3 ubiquitin-protein ligase XBAT33-like isoform X1 [Populus euphratica]) HSP 1 Score: 74.7 bits (182), Expect = 9.200e-10 Identity = 61/209 (29.19%), Postives = 96/209 (45.93%), Query Frame = 0 Query: 58 EQMIEASKEGNVAVAHALLLQDPTLASCRDSVG-QSPLMWAAYKGYTALAVLLIQTNAPVDDHDCQSSRSALYMACEFGNWPVASLLLQHGANPSFRRQLYGRTCLQIAAYNNHAHVVQGVLA-FAASCPPSCPTPCVVD--------------------VNAVDNHGSTALHLAIR----EDPQQAISLHPSNASSSSFDISDTVRVL 241 E+++ A+++G++ A LL +P LA G SPL +AA KG+ + LL++ A V+ + ++AL AC +G+W V LL N + L GRT L AA N HA ++ V+A F S P C+ VN + G TALH+ + Q + +H +N SS +F T+ ++ Sbjct: 12 ERLVSAARDGDLVEARMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVGLLLENGADVNSRN-YCGQTALMQACRYGHWEVVQTLLLFRCNVTRADYLNGRTALHFAAVNGHARCIRLVVADFVPSAPFEAMHACIEGDTGDGSSEKNRFDQSALSRFVNKAADGGITALHMVALNGHFDCVQLLLDIH-ANVSSETFHYGTTMDLI 218
BLAST of NO20G02210 vs. NCBI_GenBank
Match: PTQ39197.1 (hypothetical protein MARPO_0046s0020 [Marchantia polymorpha]) HSP 1 Score: 74.7 bits (182), Expect = 9.200e-10 Identity = 45/127 (35.43%), Postives = 72/127 (56.69%), Query Frame = 0 Query: 54 AALVEQMIEASKEGNVAVAHALLLQDPTLASCRD-SVGQSPLMWAAYKGYTALAVLLIQTNAPVDDHDCQSSRSALYMACEFGNWPVASLLLQHGANPSFRRQLYGRTCLQIAAYNNHAHVVQGVLA 180 +A E+++ A+++G+ A ALL +P LA V SPL ++A +G+T + LL++ V+ + ++AL AC +G+W VA LL + AN + L GRT L AA N HA ++ V+A Sbjct: 8 SATGERLVSAARDGDFQEAQALLECNPRLAKYSTFGVRNSPLHFSAMQGHTEIVTLLLECGVEVNTRN-YCGQTALMQACRYGHWEVAQTLLLYKANVTRADYLNGRTALHFAARNGHARCIRLVVA 133
BLAST of NO20G02210 vs. NCBI_GenBank
Match: PTQ39196.1 (hypothetical protein MARPO_0046s0020 [Marchantia polymorpha]) HSP 1 Score: 74.7 bits (182), Expect = 9.200e-10 Identity = 45/127 (35.43%), Postives = 72/127 (56.69%), Query Frame = 0 Query: 54 AALVEQMIEASKEGNVAVAHALLLQDPTLASCRD-SVGQSPLMWAAYKGYTALAVLLIQTNAPVDDHDCQSSRSALYMACEFGNWPVASLLLQHGANPSFRRQLYGRTCLQIAAYNNHAHVVQGVLA 180 +A E+++ A+++G+ A ALL +P LA V SPL ++A +G+T + LL++ V+ + ++AL AC +G+W VA LL + AN + L GRT L AA N HA ++ V+A Sbjct: 8 SATGERLVSAARDGDFQEAQALLECNPRLAKYSTFGVRNSPLHFSAMQGHTEIVTLLLECGVEVNTRN-YCGQTALMQACRYGHWEVAQTLLLYKANVTRADYLNGRTALHFAARNGHARCIRLVVA 133
BLAST of NO20G02210 vs. NCBI_GenBank
Match: OAE19121.1 (hypothetical protein AXG93_2062s1320 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 74.3 bits (181), Expect = 1.200e-9 Identity = 56/185 (30.27%), Postives = 87/185 (47.03%), Query Frame = 0 Query: 54 AALVEQMIEASKEGNVAVAHALLLQDPTLASCRD-SVGQSPLMWAAYKGYTALAVLLIQTNAPVDDHDCQSSRSALYMACEFGNWPVASLLLQHGANPSFRRQLYGRTCLQIAAYNNHAHVVQGVLAFAASCPPSCPTPCVVD----------------VNAVDNHGSTALHLAIREDPQQAISL 222 +A E+++ A+++G+ A ALL +P LA V SPL ++A +G+T + LL++ V+ + ++AL AC +G+W VA LL + AN + L GRT L AA N HA ++ V+A P VD VN + G ALH+A + + L Sbjct: 8 SATGERLVSAARDGDFQEAQALLECNPRLAKYSTFGVRNSPLHFSAMQGHTEIVTLLLECGVEVNTRN-YCGQTALMQACRYGHWEVAQTLLLYKANVTRADYLNGRTALHFAARNGHARCIRLVVADYVPSVPYLWNTLQVDKPEDTPTMKNYMDRTLVNKPADGGICALHMAALNGHTECVQL 191
BLAST of NO20G02210 vs. NCBI_GenBank
Match: XP_021616424.1 (E3 ubiquitin-protein ligase XBAT33-like [Manihot esculenta] >XP_021616425.1 E3 ubiquitin-protein ligase XBAT33-like [Manihot esculenta] >XP_021616426.1 E3 ubiquitin-protein ligase XBAT33-like [Manihot esculenta] >OAY48270.1 hypothetical protein MANES_06G145600 [Manihot esculenta]) HSP 1 Score: 73.9 bits (180), Expect = 1.600e-9 Identity = 62/209 (29.67%), Postives = 97/209 (46.41%), Query Frame = 0 Query: 58 EQMIEASKEGNVAVAHALLLQDPTLASCRDSVG-QSPLMWAAYKGYTALAVLLIQTNAPVDDHDCQSSRSALYMACEFGNWPVASLLLQHGANPSFRRQLYGRTCLQIAAYNNHAHVVQGVLA-FAASCPPSCPTPCVVD--------------------VNAVDNHGSTALHLAIR----EDPQQAISLHPSNASSSSFDISDTVRVL 241 E+++ A+++G++ A LL +P LA G SPL +AA KG+ + LL++ A V+ + ++AL AC +G+W V LL N + L GRT L AA N HA ++ V+A F S P + D VN + G TALH+A + Q + +H +N S+ +F TV ++ Sbjct: 12 ERLVSAARDGDLVEARMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEIVALLLENGADVNSRN-YCGQTALMQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHARCIRLVVADFVPSAPFEAMHAQLEDNAGDASNMNDKFYQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDIH-ANVSAVTFHYGTTVDLI 218 The following BLAST results are available for this feature:
BLAST of NO20G02210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G02210 ID=NO20G02210|Name=NO20G02210|organism=Nannochloropsis oceanica|type=gene|length=2439bpback to top protein sequence of NO20G02210.1 >NO20G02210.1-protein ID=NO20G02210.1-protein|Name=NO20G02210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=513bpback to top Synonyms
Publications
|