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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr20 | genome | chr20:649537..654946 + |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO20G02170 vs. NCBI_GenBank
Match: XP_005852621.1 (hypothetical protein NGA_0713600 [Nannochloropsis gaditana CCMP526] >EKU23211.1 hypothetical protein NGA_0713600 [Nannochloropsis gaditana CCMP526] >EWM22017.1 hypothetical protein Naga_100361g3 [Nannochloropsis gaditana]) HSP 1 Score: 282.7 bits (722), Expect = 1.200e-72 Identity = 141/258 (54.65%), Postives = 181/258 (70.16%), Query Frame = 0
Query: 7 LVGLASLATALGNGYRTNDNLQSRPGPNRTDECPFYFNTSPSSNTAVG-SPQFGSLLDSVSYSVTFPKMRWGRKTWIQLRFFSNVQDLPFENVKFCIMPYSNTPDDDKYAPEFQNRVKYAPRIRGPQPLIELNSNVSLPYVNATGSGQGFDTVCVTVPSVKAKGIQRVNFQYASDRCTVLLKWKGWVEFDNPFYSLYPTTAPQRCFANQNPSGPDNFNPVKTYEAENLNIPQSCGTCTPGRNCKGDNKVREPKAKKNK 264
+ GL L + LGN + L+SRPGPNRT ECP++FN PS+ T +G + FG L+DSV YS+TF K+RWGR TWIQ RF+SNVQDLP E+V FC M Y+ TP +Y+P +Q RV+++PR++GPQP + NVS PY +G GF+TVCVTVP VKA+G Q+V F Y+S+ C+ + +KGWVEF NPF SLYP TAP C A + S P+ FN V+TY ++N NIP SCGTCTPGRNCKG N+ K N+
Sbjct: 14 VAGLLPL-SVLGN--KPQAPLESRPGPNRTTECPYFFNPKPSALTGIGNATTFGPLVDSVDYSLTFQKIRWGRNTWIQGRFYSNVQDLPIEDVTFCNMLYNYTPGGLEYSPLYQGRVRFSPRVKGPQPQPVVYPNVSTPYT----TGDGFETVCVTVPYVKARGRQKVRFLYSSNICSTQVTFKGWVEFKNPFASLYPATAPATCEAAEVNSAPNTFNKVRTYGSDNRNIPVSCGTCTPGRNCKG-NRAAHTNRKDNR 263
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G02170 ID=NO20G02170|Name=NO20G02170|organism=Nannochloropsis oceanica|type=gene|length=5410bp
CTGGCCGACATTTTTTTTGGGTACATCTACAAGACTTCATCTTCCAAACT
GATATGCATTACACATCGATGCGGTTTCAACAGCGACCCACGACAGATAA
AGAAAATCACCAGCAATGGAAACCATGAGAACTCTGGGTTGTTATCACCG
TCTGCAAAGAAATCCTGCATGCACCACACCCATCCTTGTATTCTGCACTT
CGCACTATATGCTTTTGATGTGTTTTACGACAGATTACCCGGAAGTGGTT
TAAATTTTGAAAGCGGCGCTGTGGCTTTGAAGATCCTCTTCTTGTCTTCC
AAGATGCAACCATCGGCTAGGAATCGACTCCAATGATTTGGGGACATGAA
CACCAGACTGCTACACGATACTCTTAGAAAGCTTGTCTGTGTGAACTTAG
ATCTCTGTCTGACCCTCTGAATGGGCTGCAAACGATCCCTTGAATCTCGA
CGATCGCCCACCCCCGTTAAGCGCACGATTCTCTCTCCGGCAACCCGTTG
CTTCACGTACGTCGCGCAAGGCGATTGCATTTCGCAGGGCACACAAAGAT
TTCCACCCATCACTCTACCAGAGTTTTAATGTCACCAATCTGAAGTGTCT
AGACGTCTGGCTGACAATCAAATTAAAGCATCAAGCGTGTCTTAAGCATC
GGTTGTCGCTAGGTAACCCTTGAGCTTTTGAATGTCCACAGGAGAATGTT
CATGCATCATGCCTCAGAAGTGATTCTGTATCTATCATGCTGCTGCCCTG
AAAAAAGTAGCAAGCAATCCCACAGAAAATTCTTCAGGTTATCGTGATGG
ATGTCCAAGATCAAAAAGATATATTTAGTTAAGCCAAAAAGGCGAGTGCA
ACCGATTTGAACGAGTTCGACCGCGGTCTGGAAGTAGAGGCTCCTCAACG
GAATTTTGCAAAGAAAACTTAAACTCGAGGAGAGAGAAGATTCGTTTCTT
TACTGGCTTGATTTGGTGCAGAGGAGTTGAGCATCTCGCGTCGGATTGCT
CATTCTTGGCCTTCTTCAAGCAATGTGTCCTTCCTGTGAACGATGTGAAC
GGAATCGAACGTGGCCCATCACCACCGTATGCATGCCTTTAGGGAGTGTT
GAATCTCTGGGACGGCAGTCCTGTCCTCTTATCCTTGCCGCTTGTTTCTC
TTCTTCTTGCTTCTCCTGTGTCGACGGACGTCTTAATATTCATTCCTTTA
CCACACCTTCCACAGATCACCATGCGATCCTTGACTGCCCTCGTGGGCCT
GGCCAGCCTTGCTACCGCGCTCGGCAACGGGTATAGAACCAATGgtacgt
gtgcgagagtctgtgcatgctccgcagcggcctttgatcactcggtcgcc
aattacgttcgtcctcttctttcctcccttcctccctccttcactctccc
cttttccctcctgtacacagACAACCTGCAGTCCCGCCCCGGGCCCAACC
GTACTGATGAGTGCCCATTCTATTTCAACACTAGCCCCAGTTCCAATACG
gtaagtttgtacgcttatatatgtcgttccaaccattttttcctcctctc
tctggtataccgttttggcctcccactctgcttttttaatccaactcgag
agcatatgtcccttctaatcatcgctttgtggtctctccctcactttcaa
actcccgcagGCCGTGGGCTCCCCTCAATTCGGCTCGCTCCTCGACTCTG
TCTCTTACTCGGTCACCTTCCCGAAGATGAGGTGGGGTCGCAAAACGTGG
ATCCAGCTCCGTTTCTTCAGCAACGTCCAGGACTTGCCCTTCGAGAATGT
GAAGTTCTGCATCATGCCTTACTCCAACACGCCGGACGACGATAAGTACG
CGCCCGAGTTCCAAAACCGGGTCAAGTACGCCCCTCGCATCAGGGGTCCC
CAGCCCCTGATTGAGCTCAACAGCAACGTGAGCTTACCGTACGTGAACGC
CACGGGCTCGGGGCAAGGCTTCGACACAGTGTGTGTAACTGTACCAAGTG
TAAAGGCGAAGGGCATCCAGAGGGTGAACTTCCAGTACGCTTCCGACCGG
TGCACCGTCTTGCTCAAGTGGAAGGGATGGGTGGAGTTCGACAATCCGTT
CTACTCCCTCTACCCTACCACCGCGCCTCAGCGTTGCTTTGCAAACCAGA
ACCCCTCGGGCCCTGACAACTTTAACCCTGTTAAGACCTACGAGgttcgt
cttgtttgtatctctctctccctctctccctctttcctcctcctttttca
gcttgtgcttatcatgattgcggcttgtccctccttccctcccttctttc
cttcttcctcgccatcattgtacggagggggggactgattttccccttcc
ctttcttgtccagctgttgaaatatctcattcctttcgtctttccccttc
cccctccccttcctccctccctccctcttaacccctcccacccctccacc
cctcctccagGCCGAGAACTTGAATATACCCCAGAGCTGTGGGACCTGTA
CACCTGGTCGGAACTGCAAGGGCGACAATAAGgtcaaggagcctaagacc
aagaagaacaaaaccacgtaatccttgattatttcaccatgagggatgga
ccggctacaggcacctttgtcaggaaaattagtcatgggcaaggttgcgt
cagtacgtatcattgtgtgtcacgtcttgttcgagtagtaagaaaaaata
tttttattgttggagggagatgaattgttgtggaggaaagaaagaggttg
agagtagagaagggggtgtatgtgtgtgaagaaaagaagtgttatcatgg
tggcctgggcaaaaaaaggataaagcataggattggacatcacaaaacac
cacaagcactgcaagtacatacatgcacagacagaccccgcccaccctgc
atataaagcctgctttgccttggccaacctcctgcctctgtctcttgcag
aaacttgacagcttaacggcccattagcagttggaacaagaccaagcgcc
ctctcctctcccaagcctgcgagtcgagaagaagattcacccaagggtgt
ttggccctctctctccgcacccgctgtctatctcgtcctccgaacgtgct
tctttgcatggggcttggtaatgcacgcggtggtgatgcgggtggatggc
cattggttggaccaaggcatggcattgcaggcagacaatgggcccggcga
gggtctgtcatttttctttcgtttggtttattccatgcatgtttcacgcg
tactcgtgcactgaatctcagcctttcttgcatgttcgtatgtcttagtg
tcaggccgtccttctatctccacttggatggacctggtcctcctttcaca
cgcatttcccatacactcattttgcaccgtttatacccaggcctgaactg
accataccgcacaaacaatcatatatacctaaaccatgcttttgtccttg
tacgatgccatcatgaaattcacacataccagtttcctgtagcgctcttc
cccgtacatataaaccaggacccgacaaaaaccatgcgatccttgagtgc
tcttcttggcctagccggccttgccaccgtggttggcaacgagagactta
ttggtacgtgcacaagactgtgtaatcacgttttgtctggatatataaac
cattttgcccgtcaacgatatccatcctctccttcctgtccatccctccc
gccctcccttctctcctcccccaaacccctcccacgaatctagacaccat
gcagttccgcgctgcgcctaatcgcactgatgaatgcccggtctttttca
acactgatcccgacttcaatacggtaagtatgtacgctctttagctcccc
ccccgcatactacacggcctccccatcctactccccccccctcatgagag
catatgtccctccttccgacaccatttcctcctcatccttcccccacttt
cttactctcgcagattgtgggctccgaaaacttcggctcgctcctcgact
ctgtctcttactcggtcaccttcccgaagatgaggtggggtcgcaaaacg
tggatccagctccgcttctacagcaacgtccaggacttgcccttcgagaa
tgtgaagttctgcatcatgccttactccaacacgccggacgacgataagt
acgcgcccgagttccaaaaccgggtcaagtacgcccctcgcatcaggggt
ccccagcccctgattgagctcaacagcaacgtgagcttaccgtacgtgaa
cgccacgggctcggggcaaggcttcgacacagtgtgtgtaactgtaccaa
gtgtaaaggcgaagggcatccagaaggtgaacttccagtacgcctccgac
cggtgcactaccgagctcgtctggaagggatgggtggagttcgacaatcc
gttctactccctctaccctaccaccgcgcctcagcgttgctttgcaaacc
agaacccctcgggccctgacaactttaaccctgttgagacttatggagtg
agtagttttgtatctctctctccctctctccctctttcctcctccttttc
gcttgtgctcaccatgattgcggcttctccctccctccctccctccccct
cctcccaaccttttctccatcattgtacggagggggggaaacgaggatga
aatcccccttccctttcttgtccaactgttcaaacatctcgtttcccttt
cccttccttccctccctccctccctccctccctcaggcccagaacctgaa
ggttcccaaaagctgtggcacatgcacgcctggtgtaaactgcaagggcg
acaataagGTCAGGGAGCCCAAGGCTAAGAAGAACAAAACCACGTGAAAG
TAATCCTTTTTCGGTAGTTATTGGATTCACTTCTTACAAGAAATGAAGGG
AGGGGGATGGACCAGCCGCATGGCCTGTGTCAGGGAAATCAGTCATGGTC
AAGGCGGCGTCAGTACGTGTCACTACGTGTCACGTGTAGTATGAGTAGTA
GAGTAATTTATCAATGATCAAGTGTGAAATAAGGAGTGGGTCAGCCACGC
GTGTTTTTGTGCGACTTGTAAGAATAGCGGTAGGAAGCGAGAGAGACATA
AGTGGAAGAAGGAAGGAGGAAACGGAGGTGGTATAAGGGAGGCGTGCCGA
TGCAGGTAGGATGAAGCGTTCCCTCCCTGCTATATTGCACTGGGGAAGAC
AAGGCGATGTATTCATGTGCAGCACAGTTCTAGGAGGAGGGAAAGATAAA
AAGAATGACTCGGTTGAGTCCTGGAATGTGATGGGATGGGACAAGCGCGC
AGGTTTCTCGTCCGCAGTCGCCCAGAGGGGGGAAAAATAAAGATTCAAAT
ATACTATACTACTAGAGGAGTATGTGATGATATAGTGACCGTTGATCGAC
GAGAGAAGCT back to topprotein sequence of NO20G02170.1 >NO20G02170.1-protein ID=NO20G02170.1-protein|Name=NO20G02170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=266bp
MRSLTALVGLASLATALGNGYRTNDNLQSRPGPNRTDECPFYFNTSPSSN
TAVGSPQFGSLLDSVSYSVTFPKMRWGRKTWIQLRFFSNVQDLPFENVKF
CIMPYSNTPDDDKYAPEFQNRVKYAPRIRGPQPLIELNSNVSLPYVNATG
SGQGFDTVCVTVPSVKAKGIQRVNFQYASDRCTVLLKWKGWVEFDNPFYS
LYPTTAPQRCFANQNPSGPDNFNPVKTYEAENLNIPQSCGTCTPGRNCKG
DNKVREPKAKKNKTT* back to top
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