NO20G02040, NO20G02040 (gene) Nannochloropsis oceanica

Overview
NameNO20G02040
Unique NameNO20G02040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2960
Alignment locationchr20:604278..607237 +

Link to JBrowse

Properties
Property NameValue
DescriptionEndonuclease/exonuclease/phosphatase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:604278..607237 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR005135Endo/exonuclease/phosphatase
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
Homology
BLAST of NO20G02040 vs. NCBI_GenBank
Match: EWM22036.1 (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 566.2 bits (1458), Expect = 8.200e-158
Identity = 269/404 (66.58%), Postives = 327/404 (80.94%), Query Frame = 0
Query:   12 SRPASPRWLQPHKLARSLCVLLLMYAALLSPLRHQARAFNTLRPLSMSMPAVSTPLA--QRLRVVTYNILTPNYATPRDLPAHPAVHLNEQERLQKILTKLKAETVQGSVIALQEISRAWAGHLHVFFAREGYHFVHSGYGRPSSGFMGVGLAWPHSTLKAATVDISRLADAKPWPAPPPPGALTSLSRGLLRPFRRLLGTRGRGNGKDEDVMAAARDRSNTVIMAQLRSKES--EGLDFFIACYHMPCEFRRPPIMTVHAALLVQRLQALAQGKPHIVTGDFNFQPTWPQYQLITEGEMPTEHAHYPPMPPTDPWTPRVEQPLKSALKVKWGQEPDFTCHSYADRETGERFCEPLDYIFLSPEWRVVDAVQLQSKKDALNLPCPFPDQDEPSDHVMLWADLSL 412
            +RP +  W     L R  CV L M    LS  R  ARA   +  L+MS    S+  A  ++LR+VTYNILTP+Y+TP+ LPAHP+++LNEQERL+KIL KL+ E  QG+VIALQE+SRAWAGHLHVFF+R GYHFVHS YGRPSSGFMGVGLAWP STL+A  ++ISRLADAKPWPA P PG L+S S  L RPFR++ G +    G++EDV+A+ARDRSN VI+A LRSK++  + +DFF+ACYHMPCEFRRP IMTVHAALLVQR+QALA  KPHIV GDFNFQP+WPQY++ITEG++   H HYPP+PP+DPW P V+QPL+SAL+VKWG+EPDFTC+SYADRE+GERFC PLDYIF+S EW+V DA++LQSK +AL +PCPFP+QDEPSDHV+LWADLSL
Sbjct:   13 ARPVAKLW---SGLGRLRCVFLFMLTTFLSRGRQSARACRVVGLLTMSTSTSSSSFAPPKKLRMVTYNILTPSYSTPKSLPAHPSIYLNEQERLEKILEKLEPEIAQGAVIALQEVSRAWAGHLHVFFSRAGYHFVHSEYGRPSSGFMGVGLAWPQSTLEAVDIEISRLADAKPWPAAPSPGPLSSFSHRLFRPFRKIWGLQA---GREEDVLASARDRSNVVIVANLRSKQASPQDMDFFVACYHMPCEFRRPSIMTVHAALLVQRMQALAGSKPHIVAGDFNFQPSWPQYRIITEGDIEAAHPHYPPLPPSDPWLPHVDQPLRSALRVKWGKEPDFTCYSYADRESGERFCAPLDYIFVSSEWKVEDAIKLQSKDEALKMPCPFPNQDEPSDHVLLWADLSL 410          
BLAST of NO20G02040 vs. NCBI_GenBank
Match: WP_054466981.1 (hypothetical protein [Planktothricoides sp. SR001] >KOR35969.1 hypothetical protein AM228_15305 [Planktothricoides sp. SR001])

HSP 1 Score: 258.5 bits (659), Expect = 3.600e-65
Identity = 140/342 (40.94%), Postives = 201/342 (58.77%), Query Frame = 0
Query:   72 RVVTYNILTPNYATPRDLPAHPAVHLNEQERLQKILTKLKAETVQGSVIALQEISRAWAGHLHVFFAREGYHFVHSGYGRPSSGFMGVGLAWPHSTLKAATVDISRLADAKPWPAPPPPGALTSLSRGLLRPFRRLLGTRGRGNGKDEDVMAAARDRSNTVIMAQLRSKESEGLDFFIACYHMPCEFRRPPIMTVHAALLVQRLQALAQGKPHIVTGDFNFQPTWPQYQLITEGEMPTEHAHYPPMPPTDPWTPRVEQPLKSALKVKWGQEPDFTCHSYADRETGERFCEPLDYIFLSPEWRVVDAVQLQSKKDALNLPCPFPDQDEPSDHVMLWADLSLEK 414
            R VTYNIL+ + A P          L+ + RL +I+ KL  E  Q S+I LQE+S  WAG LH FFA   Y+ V   YG   +G+MGV +A+P    +     I RL+D++ WP   P   L   +R  L+ F RL   +   +   E  +A A+ R+N VI  +L  K ++G  F +A YHMPC +  P +MT+H ++LVQR+Q LAQ  P ++TGDFN +P   QYQLIT G M + H  YPP+   D W P +  PL+SA +  +GQEP+FT  +YA       F E LDYI+LSP+W+VV A+ L ++    +    FP+ ++PSDH++L  +++L+K
Sbjct:    5 RFVTYNILSSHLAEPEHFVKCDRADLDPETRLNRIVAKLLPEIAQNSIICLQEVSTLWAGELHRFFANHNYYLVTGLYGHQKNGYMGVAIAFPLGKYQMLEAKIERLSDSRDWPKLSP---LAVAARNFLQGFVRLWDKKKAKS--LEHAIAHAQRRTNQVIFLRLDDK-AQGDRFGVATYHMPCVYYAPKVMTIHTSMLVQRIQELAQNDPFVLTGDFNIRPAESQYQLITTGSMASNHPAYPPILKGDRWRPELATPLRSAYREAFGQEPEFT--NYAQTRKKAPFQETLDYIWLSPQWQVVSALPLPTRDQVTS---SFPNPEQPSDHILLAVEMTLKK 335          
BLAST of NO20G02040 vs. NCBI_GenBank
Match: XP_002505292.1 (predicted protein [Micromonas commoda] >ACO66550.1 predicted protein [Micromonas commoda])

HSP 1 Score: 245.4 bits (625), Expect = 3.200e-61
Identity = 135/338 (39.94%), Postives = 194/338 (57.40%), Query Frame = 0
Query:   72 RVVTYNILTPNYATPRDLPAHPAVHLNEQERLQKILTKLKAETVQGSVIALQEISRAWAGHLHVFFAREGYHFVHSGYGRPSSGFMGVGLAWPHSTLKAATVDISRLADAKPWPAPPPPGALTSLSRGLLRPFRRLLGTRGRGNGKDEDVMAAARDRSNTVIMAQLRSKESEGLDFFIACYHMPCEFRRPPIMTVHAALLVQRLQALAQGKPHIVTGDFNFQPTWPQYQLITEGEMPTEHAHYPPMPPTDPWTPRVEQPLKSALKVKWGQEPDFTCHSYADRETGERFCEPLDYIFLSPEWRVVDAVQLQSKKDALNLPCPFPDQDEPSDHVMLWADL 410
            RVVTYN+L+ +   P          L+   RL K+L KL+ E  +G+VI LQE+S+ WAG LHVFFA+ GYH + S YG+P +G+MG+ LA P +    + VDISR +D K  P  P PG L  +    +  +R++ G R       +     A+ R NT++ A L+ K+S G  F +A YHMPC FR P +MT+H+ L     Q  +   P I+ GDFN +P    Y LIT G + ++H   P  P  + W+  ++ P++SA KV  G EPDFT  ++A  +   +F + LDYIF+SP+  V + +QL  + +      PFP  DEPSDH++L A L
Sbjct:    9 RVVTYNVLSSSLCEPDYFAHCDPNDLHPPNRLAKLLAKLEPEMAKGAVIGLQEVSQKWAGELHVFFAKRGYHMICSLYGKPFNGYMGIALAVPLAKYDVSKVDISRCSDTKKLPREPKPGLLQKVINYPINLYRKVSGERA-----PQSDWQLAKGRFNTIMYASLQCKKS-GAKFGVANYHMPCMFRNPKVMTIHSQLAAMYAQQQSGNLPVILMGDFNLKPGDGGYDLITTGTLASDHEAAPVPPAGEEWSTSLKYPMRSAYKVANGAEPDFT--NFAQIKDDPQFIDTLDYIFISPKIEVAEVLQLPHRSEVKG---PFPAPDEPSDHILLAATL 335          
BLAST of NO20G02040 vs. NCBI_GenBank
Match: XP_005834357.1 (hypothetical protein GUITHDRAFT_157631 [Guillardia theta CCMP2712] >EKX47377.1 hypothetical protein GUITHDRAFT_157631 [Guillardia theta CCMP2712])

HSP 1 Score: 237.7 bits (605), Expect = 6.700e-59
Identity = 129/348 (37.07%), Postives = 191/348 (54.89%), Query Frame = 0
Query:   72 RVVTYNILTPNYATPRDLPAHPAVHLNEQERLQKILTKLKAETVQGSVIALQEISRAWAGHLHVFFAREGYHFVHSGYGRPSSGFMGVGLAWPHSTLKAATVDISRLADAKPWPAPPPPGALTSLSRGLLRPFRRLLGT------RGRGNGKDEDVMAAARDRSNTVIMAQLRSKESEGLDFFIACYHMPCEFRRPPIMTVHAALLVQRLQALAQGKPHIVTGDFNFQPTWPQYQLITEGEMPTEHAHYPPMPPTDPWTPRVEQPLKSALKVKWGQEPDFTCHSYADRETGERFCEPLDYIFLSPEWRVVDAVQLQSKKDALNLPCPFPDQDEPSDHVMLWADLSLEK 414
            RVV+YN+L+ +             +L+EQ+RL+K++  L  E  + S+I LQE+S  WAG LH FF  +GYH +H GYG    G+MGV +++P +  +     I R++D K WP PPP             PF+RL G       + R      D +  A+ R+N +I+  +  +E+E   F++A YHMPC+FR P +M  H +L +   Q  A+ +P I  GDFNF+P    Y L+T+G +  +  HYP MP  DPW P++   +KSA  +   +EP +T  +Y    T E F   LDY+F+SP   V    +L+   D      PFP   EPSDHV++ ADLS+++
Sbjct:   31 RVVSYNVLSSSLCESDYHVKCKPSNLDEQKRLKKVINLLDEEVEKQSIICLQEVSTKWAGSLHTFFCEQGYHMIHMGYGNKFDGYMGVSISFPTTKFRLKESRIVRVSDLKSWPKPPPE-----------NPFKRLKGAVKSLWWKIRQIRPPIDPVFDAKKRANQMIVLNIEDRETE-TSFWVATYHMPCQFRVPAVMVTHTSLALSEAQLAARNQPLIFCGDFNFKPGDSPYNLVTQGFIAKDDQHYPTMPANDPWVPKIRYAMKSAYHLLNNKEPQYTNWAYTKGST-EDFIGCLDYVFVSPGISVEAVKELEEISDPPQ--GPFPSDTEPSDHVLIAADLSIQR 363          
BLAST of NO20G02040 vs. NCBI_GenBank
Match: XP_003060326.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH55095.1 predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 233.4 bits (594), Expect = 1.300e-57
Identity = 142/369 (38.48%), Postives = 198/369 (53.66%), Query Frame = 0
Query:   40 LSPLRHQARAFNTLRPLSMSMPAVSTPLAQRLRVVTYNILTPNYATPRDLPAHPAVHLNEQERLQKILTKLKAETVQGSVIALQEISRAWAGHLHVFFAREGYHFVHSGYGRPSSGFMGVGLAWPHSTLKAATVDISRLADAKPWPAPPPPGALTSLSRGL-LRPFRRLLGTRGRGNGKDEDVMAAARDRSNTVIMAQLRSKESEGLDFFIACYHMPCEFRRPPIMTVHAALLVQRLQALAQGKPHIVTGDFNFQPTWPQYQLITEGEMPTEHAHYPPMPPTDPWTPRVEQPLKSALKVKWGQEPDFTCHSYADRETGERFCEPLDYIFLSPEWRVVDAVQLQSKKDALNLPCPFPDQDEPSDHVMLWA 408
            LS  R   RAF T      S   +++      RVVTYN+L+ +   P          L+   RL+K L KL+ E  +G+VIALQE+S+ W G LHVFFA+ GYH V S YG+P +G+MG+ LA P        VDISR +D K  P  P P  +  L     L  +  L G R +     +   A AR+R NT++ A L+ K S G++F +A YHMPC FR P +MT+H+ L     Q +A   P ++ GDFN +P    Y LIT G++   H   P  P  + W+  +  P++SA  V  G EPDFT  ++A  +   +F + LDYIF+SP   V + + L  + +      PFP   EPSDH++L A
Sbjct:   88 LSHARQHRRAFAT------STIVMASSETHDARVVTYNVLSSSLCEPTYFTHCAPEDLDPPTRLKKTLVKLEDEMKKGAVIALQEVSQKWTGELHVFFAKRGYHLVSSLYGKPFNGYMGIALAVPIDKYDVVKVDISRCSDTKRLPRAPKPSKMKELLVDKPLGLYYFLTGKRAK-----QSDWALARNRFNTIMYATLKCK-SSGVEFGVANYHMPCMFRDPRVMTIHSQLAAAYAQKMAGSLPVVLMGDFNLKPGDGGYDLITTGDIDAAHEAAPVAPDGETWSTALTYPMRSAYHVATGSEPDFT--NFAQIKDDPQFIDTLDYIFISPTVDVAEVMPLPHRSEVKG---PFPSAVEPSDHILLAA 439          
BLAST of NO20G02040 vs. NCBI_GenBank
Match: XP_005716030.1 (unnamed protein product [Chondrus crispus] >CDF36211.1 unnamed protein product [Chondrus crispus])

HSP 1 Score: 230.3 bits (586), Expect = 1.100e-56
Identity = 136/362 (37.57%), Postives = 196/362 (54.14%), Query Frame = 0
Query:   58 MSMPAVSTPLAQRLRVVTYNILTPNYATPRDLPAHPAVHLNEQERLQKILTKLKAETVQGSVIALQEISRAWAGHLHVFFAREGYHFVHSGYGRPSSGFMGVGLAWPHSTLKAATVDISRLADAKPWPAPPPP----GALTSLSRGLLRPFRRLLGTRGRGNGKDEDVMAAARDRSNTVIMAQLRSKESEGLDFFIACYHMPCEFRRPPIMTVHAALLVQRLQALAQGKPHIVTGDFNFQPTWPQYQLITEGEMPTEHAHYPPM----PPTDPWTPRVEQPLKSALKVKWGQEPDFTCHSYADRETGERFCEPLDYIFLSPEWRVVDAVQLQSKKDALNLPCPFPDQDEPSDHVMLWADLSL 412
            +++ +VS P+    R+V+YN+L+ + A P   PA    +L    RL +IL KL+      S+I LQE+S AW+GHLH FFA  G+H + + +G   +G+MG GLA+P    +A  + I RL D   WP+   P     A+ ++   L R    L G +        D    AR R N  I A+LRS+ + G    +A YHMPC F  PP+M +HAAL V+  Q L      ++ GDFN +P    Y +I  G++  +H+ +P       P + W P    P+KSA K   G+EPDFT  +YA  E    F E LDY+F + +  +VD ++L  K+D+     P PD DEPSDH+M+ A L L
Sbjct:   94 LAIKSVSAPVLS--RIVSYNLLSSSLADPTHFPACDPSNLRAATRLGRILAKLEGPVASRSIICLQEVSLAWSGHLHTFFANRGFHLLLASHGSYFNGYMGEGLAFPLDLYEAVDLRIERLTDRMGWPSKRRPEGVAKAIANVCGRLQRAANALFGPKRPNRIAKRDPWDHARGRYNRFIFARLRSR-TNGAKLCVATYHMPCIFWSPPVMLIHAALAVRTFQRLCGEDLGVLAGDFNIKPDDASYSMILSGDVDPKHSSFPVSTPDGSPPEKWFPAPLTPMKSAYKEILGEEPDFT--NYAKVENQATFIETLDYLFCTRDVDIVDVIRL-PKRDSFE--GPLPDADEPSDHIMIGATLRL 447          
BLAST of NO20G02040 vs. NCBI_GenBank
Match: XP_009040526.1 (hypothetical protein AURANDRAFT_72441 [Aureococcus anophagefferens] >EGB04790.1 hypothetical protein AURANDRAFT_72441 [Aureococcus anophagefferens])

HSP 1 Score: 209.1 bits (531), Expect = 2.500e-50
Identity = 137/375 (36.53%), Postives = 188/375 (50.13%), Query Frame = 0
Query:   70 RLRVVTYNILTPNYATPRDLPAHPAVHLNEQERLQKILTKLKAETVQGSVIALQEISRAWAGHLHVFFAREGYHFVHSGYGRPSSGFMGVGLAWPHSTLKAATVDISRLADAKPWPAPPPPGALTSLSRGLLRPFRRLLGTRG-----------RGNGKDEDVMAAARDRSNTVIMAQLRSKESEGLDFFIACYHMPCEF--------------RRPPIMTVHAALLVQRLQALAQGKPHIVTGDFNFQPTWPQYQLITEGEMPTEHAHYPPMP-----PTDPWTPRVEQPLKSALKVKWGQEPDFTCHSYADRETGER--FCEPLDYIFLSP-EWRVVDAVQLQSKKDALNLPCPFPDQDEPSDHVMLWADLSL 412
            R+RVVTYN+L+ +   P       A  L+   RL+++   L AE  +G+V+ LQE+SR W+G LH +FA +GY F    YG   +G+MGV +AWP        VD  R+AD    P P    A  +    ++R +R L    G           RG     D    A+ + N ++ A L  KE  G  F +A YHMPC F               +  +M +H+ L  +R + +A G+P+++ GDFN +P    Y L+T G +    A Y P P     P   + P +E PL SA     G EPDFT  +Y     GER  F E LDYIF S  +W+V    +L+S K  L+   P+P  DEPSDHVML ADL L
Sbjct: 1757 RVRVVTYNVLSSSLCEPGYFVKCAAEDLSPPNRLKRVAALLDAEVAKGAVVCLQEVSRDWSGELHAYFADKGYQFSTGLYGTKFNGYMGVAVAWPSGKYDVLGVDACRIADTIAEP-PRERRAKEAKPNFVVRAWRSLKRRAGHVATAATEPLPRGR-PPFDTWNEAKRKHNVLVTATL--KEKGGDAFCVATYHMPCLFGSGQDKGDSTFGSVEKEQVMVIHSVLAAERAKRVAAGRPYVLCGDFNVKPYDASYALLTSGALGEAFAAYAPPPQADVAPARAFAPVLEPPLTSAYAAATGAEPDFTNFAYTKPMGGERDAFVETLDYIFCSAGQWKVAGVKELRS-KHGLDTSKPYPTADEPSDHVMLAADLEL 2126          
BLAST of NO20G02040 vs. NCBI_GenBank
Match: CBJ31273.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 201.4 bits (511), Expect = 5.300e-48
Identity = 127/354 (35.88%), Postives = 174/354 (49.15%), Query Frame = 0
Query:   66 PLAQRLRVVTYNILTPNYATPRDLPAHPAVHLNEQERLQKILTKLKAETVQGSVIALQEISRAWAGHLHVFFAREGYHFVHSGYGRPSSGFMGVGLAWPHSTLKAATVDISRLADAKPWPAPPPPGALTSLSRGLLRPFRRLLGTRGRGNGKDEDVMAAARDRSNTVIMAQLRSKES-----EGLDFFIACYHMPCEFRRPPIMTVHAALLVQRLQALAQGKPHIVTGDFNFQPTWPQYQLITEGEMPTEHAHYPPMPPTD-PWTPRVEQPLKSALKVKWGQEPDFTCHSYADRETGERFCEPLDYIFLSPEWRVVDAVQLQSKKDALNLPCPFPDQDEPSDHVMLWADLSLEK 414
            P     RV TYNIL  + A P   P     +L+   RL+++  KL AE  +GSVI LQE+   WAG LHV+F   GY FV + YG+  + +MGV LAWP    +  TVD +RL+D + W                 R                      A  R N V+ A+LR K        G  F I  YHMPC F   P+M +H +L ++ L  LA   P +  GDFNF P    Y+L  EG++P     +P  P  +  WTP+    L+SA K   G+EPDFT  + A  E  + F + LDYIF +P    + AV++   K    +  PFP  +EPSDHV+L A+  +++
Sbjct:   50 PNKMDFRVATYNILCSHLAEPTRFPQCSPRNLDAPTRLKRVKHKLDAEISKGSVICLQEVGIGWAGDLHVYFMDRGYAFVTAHYGKHFNNYMGVALAWPLDKYECLTVDTTRLSDTRRWG----------------REXXXXXXXXXXXXXXXXXXXXIAERRFNQVLFARLRPKTGAADLPNGGTFCIGTYHMPCLFNIRPVMVMHTSLAIRHLAKLAGPDPLVFAGDFNFNPDSDCYKLAVEGDLPESSGDFPVRPEWEKDWTPKTGVCLQSAYKQVDGKEPDFT--NNAKVEDWDPFIDTLDYIFHTPG---ITAVKVLPLKHRSEVNGPFPVSEEPSDHVILAAEYKVDR 382          
BLAST of NO20G02040 vs. NCBI_GenBank
Match: XP_003080744.2 (Endonuclease/exonuclease/phosphatase [Ostreococcus tauri] >CEG01449.1 Endonuclease/exonuclease/phosphatase [Ostreococcus tauri] >OUS46930.1 Endonuclease/exonuclease/phosphatase [Ostreococcus tauri])

HSP 1 Score: 198.0 bits (502), Expect = 5.800e-47
Identity = 130/360 (36.11%), Postives = 193/360 (53.61%), Query Frame = 0
Query:   62 AVSTPLAQRLRVVTYNILTPNYATPRDLPAHPAVHLNEQERLQKILTKLKAETVQGSVIALQEISRAWAGHLHVFFAREGYHFVHSGYGRPSSGFMGVGLAWPHSTLKAATVDISRLADAKPWPAPPPP----GALTSLSRGLLRP----FRRLLGTRGRGNGKDEDVMAAARDRSNTVIMAQLRSKESEGLDFFIACYHMPCEFRRPP---IMTVHAALLVQRLQALAQGKPHIVTGDFNFQPTWPQYQLITEGEMPTEHAHYPPMPP---TDPWTPRVEQPLKSALKVKWGQEPDFTCHSYADRETGERFCEPLDYIFLSPEWRVVDAVQLQSKKDALNLPCPFPDQDEPSDHVMLWA 408
            A S       RVVTYN+L+ + A P          L  + RL++++ KL AE    +VI LQE+S +WAG LH +FA++GY F+ S YG+P + +MGVGLA P    +    DISRL+D   +P   P     G LT +   L++     +R+L   R      D      AR+R N+++ A L+ K+S+ + F +A YHMPC FR      +M +HA +  Q     ++G P ++ GDFN +P  P + LIT GE+ T    YP MP      P+  + ++ ++SA     G EP+FT  + A  +  E F + LDYIF++ +  V+D + L  + +      PFP   EPSDH+ML A
Sbjct:    2 ATSDGTGATARVVTYNVLSSHLADPGYFTHCDPDDLRAETRLERVMAKLDAECAGRAVIGLQEVSMSWAGPLHAYFAKKGYTFILSLYGKPFNNYMGVGLAVPTDAYELVRSDISRLSDTVKFPRVKPKEANFGPLTPVYNLLVKTPVGLWRKLTDYRPPMTEWD-----TARNRFNSILHATLKCKKSD-VSFGVATYHMPCMFRTAADRRVMVIHAGMAAQYALNHSEGLPTVLMGDFNLKPGDPGHVLITTGELDTSIDEYPVMPEGYIGSPFNVKPQKKMESAYARVNGAEPNFT--NNARIKDDEPFIDTLDYIFVTDDVEVLDVLDLPHRDEVKG---PFPAATEPSDHIMLAA 350          
BLAST of NO20G02040 vs. NCBI_GenBank
Match: XP_001419333.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO97626.1 predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 197.6 bits (501), Expect = 7.600e-47
Identity = 122/358 (34.08%), Postives = 190/358 (53.07%), Query Frame = 0
Query:   68 AQRLRVVTYNILTPNYATPRDLPAHPAVHLNEQERLQKILTKLKAETVQGSVIALQEISRAWAGHLHVFFAREGYHFVHSGYGRPSSGFMGVGLAWPHSTLKAATVDISRLADAKPWPAPPPPGALTSLSRGLLRPFRRL-------LGTRGRGNGKDEDVMAAARDRSNTVIMAQLRSKESEGLDFFIACYHMPCEFRRPP---IMTVHAALLVQRLQALAQGKPHIVTGDFNFQPTWPQYQLITEGEMPTEHAHYPPMP---PTDPWTPRVEQPLKSALKVKWGQEPDFTCHSYADRETGERFCEPLDYIFLSPEWRVVDAVQLQSKKDALNLPCPFPDQDEPSDHVMLWADLSLE 413
            A+  RVVTYN+L+ + A P       A  L  + RL++++ KL+ E  + +V+ LQE+S  WAG LH +FA+ GY F+ S YG+P + +MGVGLA P    +    DI+RL+D   +P          ++ G L P   L       L  + R      D    AR R N+++ A L+ K++  + F ++ YHMPC FR      +M +HA +  Q     ++G P ++ GDFN +P    + LIT G++   H  YP MP     +P+  + ++ ++SA     G+EP+FT H  A  +  + F + LDYIF++ +  VVD + L  +        PFP   EPSDH+ML A + ++
Sbjct:   13 ARDARVVTYNVLSSHLAEPTYFTHCDANDLRAETRLRRVIEKLEPEVERRAVVGLQEVSMTWAGPLHAYFAKRGYAFIVSLYGKPFNNYMGVGLAVPTDAYEVVKSDIARLSDTAKFPR----AKKEEVNLGPLTPVYNLLVQTPVNLWRKLRDYRPPSDEWQTARGRFNSILYATLKCKKT-NVQFGVSTYHMPCMFRTAADRRVMVIHAGIAAQYALNQSEGLPTVLMGDFNLKPGDAGHTLITTGDLDESHEGYPIMPAGYTGEPFNVKPQKKMESAYVRVNGEEPNFTNH--ARIKDDDPFIDTLDYIFVTDDVEVVDVLDLPHRDQVKG---PFPAATEPSDHIMLAATIRVK 360          
The following BLAST results are available for this feature:
BLAST of NO20G02040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22036.18.200e-15866.58Endonuclease/exonuclease/phosphatase [Nannochlorop... [more]
WP_054466981.13.600e-6540.94hypothetical protein [Planktothricoides sp. SR001]... [more]
XP_002505292.13.200e-6139.94predicted protein [Micromonas commoda] >ACO66550.1... [more]
XP_005834357.16.700e-5937.07hypothetical protein GUITHDRAFT_157631 [Guillardia... [more]
XP_003060326.11.300e-5738.48predicted protein [Micromonas pusilla CCMP1545] >E... [more]
XP_005716030.11.100e-5637.57unnamed protein product [Chondrus crispus] >CDF362... [more]
XP_009040526.12.500e-5036.53hypothetical protein AURANDRAFT_72441 [Aureococcus... [more]
CBJ31273.15.300e-4835.88conserved unknown protein [Ectocarpus siliculosus][more]
XP_003080744.25.800e-4736.11Endonuclease/exonuclease/phosphatase [Ostreococcus... [more]
XP_001419333.17.600e-4734.08predicted protein [Ostreococcus lucimarinus CCE990... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100052g35gene8403Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G02040.1NO20G02040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO20G02040.2NO20G02040.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO20G02040.3NO20G02040.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G02040.1NO20G02040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO20G02040.2NO20G02040.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO20G02040.3NO20G02040.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G02040 ID=NO20G02040|Name=NO20G02040|organism=Nannochloropsis oceanica|type=gene|length=2960bp
CACGAACTATATGCATTCGCATGTTTTCTTCAAGTTCTGTTTCGCTGATT
TTCTCCTTTTATAGAGGGTGTACTGTAAGTCTATTTACTCTCCTTTGCTT
CCGTCACTACCTCTGCAATAGGCTTCGTCGTCTTGTACTCCTTTGGCAGC
TTTGATACCACATAACCGTACGAGGCCCGCTTCTTGCCCTCGGTCCAGAC
TGCCACGGACCGAATATGGCTCTTCTCCCGTAGTTGTCGCAGGACTTTGG
TCTTCAGAAAGGTTAGTGTTAGGCGCTCCTTTAGCGGTGATGTCGGCGGA
AGCGTCTCTTGCAATGCTTTGAAGATTTCGCGATTGTGTAGTGGCTTGCC
TTTTGCCCCGTGGATGAGCGAGAACACGGCATGTCGCAAATTAGACTGAG
GTATCGGAGCGGTGGTACCCTCAAAACTGGCGGCAGCGGTGGAGAAAGGG
CGTAGTCCGGGAAGGACAGAGGTCGTGATGACGGCGGTGCGAGGCAAGAG
ATTTGCGGCTTGTCGGGTGACACCGCGGGCCAGGGCCACGAGGGTGACAC
CATGCATTGTCGTCCTCGTTGTCGCTGACGTCTGTGGTATGGTGAAGAGT
GGATGGGGATCGTGGCATGGTAAGAAAGGTGGTTAGATGTTGGAGCAACC
GAAGCAAGGGAGGAACGGAAGCTGTGGGTCAAGCGAGAGCAACGTTTCCC
CCGACAAGACATAGCAGCCAAATACAACCACACACCGTCAGAGCCATCGC
AGGCGTCTTACACAGGCAGACGGCTCATTCAATAGTGCTCTTCAATATGC
ACACTTTGGACAGATATGACTGTAATTACGCAGCGCTCATTTGTCCCTTG
CTCGCGCCCCATACGACTCGACCTCCCCCCGTTCGTCGACGCTCAGTGAC
GATGCCGTACCCTACAAACCACCGCACAGAAGAGGAAGAGAAGAGACGCT
TCGTCCGCCATCCACAAAGGTACGCGACTTTAGATCTCTAAATGCCCTTG
CTCTACCCGGCAGGCAGTGTTTTGTCTCGTCCTGCGTCTCCCCGGTGGCT
GCAGCCCCACAAGTTAGCCCGCTCCCTCTGCGTGTTGCTGCTCATGTACG
CGGCACTCCTGAGCCCACTCCGACACCAAGCTCGAGCCTTCAATACCCTG
CGGCCCCTAAGCATGTCCATGCCTGCCGTTTCTACTCCATTGGCCCAAAG
ACTGCGGGTGGTGACGTACAACATCCTCACGCCCAACTACGCCACCCCCA
GGGACTTGCCGgtgcgtatttccttcttactcattaccttcgaatcttac
ctccgtgcttttttctcatgatgcgttatgccacaacttgtacacgtaac
aatcgttcatcacttccgccgggcactttactcgcgctttcatatcccct
tcgcttctttgattcttcctgcctcccattctctttctacagGCCCACCC
AGCCGTGCATCTGAATGAGCAAGAGCGTCTGCAAAAAATCCTGACTAAGC
TTAAGGCAGAGACTGTACAAGGTTCAGTCATTGCTCTTCAGGAGATCTCC
CGAGCCTGGGCAGGCCACTTGCACGTATTTTTTGCGCGAGAGGGTTATCA
CTTCGTCCACTCTGGGTATGGACGCCCCTCAAGTGGGTTCATGGGTGTGG
GTCTTGCCTGGCCACATAGCACCCTTAAGGCTGCCACTGTTGACATTTCT
CGCCTTGCCGACGCCAAGCCCTGGCCCGCACCGCCCCCGCCCGGTGCCCT
CACCTCCCTCTCCCGCGGCCTCCTGAGGCCCTTTCGACGCTTGCTCGGAA
CGCGTGGCCGTGGGAACGGCAAGGACGAAGATGTCATGGCTGCGGCTCGC
GACCGTTCGAACACTGTCATCATGGCACAGCTCCGTAGCAAGGAGTCGGA
AGGATTGGATTTTTTTATTGCTTGTTATCACATGCCGTGTGAGTTCCGCC
GACCACCTATCATGACGGTGCACGCCGCTCTTCTTGTGCAGCGGTTGCAG
GCCCTTGCGCAGGGAAAGCCGCACATCGTAACGgtatgtataaataagta
cggaacaggggggggagaaagggaaaagaggtggtggtcgaagatgctca
gagaaagaattggaatgaggatttgcgttccctgtctctctttctcccat
catcaactccttcacctcccctcacctccactctccccatttgcacacag
GGTGACTTTAATTTCCAACCCACGTGGCCGCAGTACCAGCTCATCACGGA
GGGCGAAATGCCCACCGAGCACGCCCACTACCCGCCCATGCCTCCCACCG
ACCCGTGGACCCCCCGCGTAGAGCAACCACTTAAGTCGGCCTTAAAAGTC
AAGTGGGGGCAAGAGCCAGACTTTACCTGTCATTCTTACGCGGACCGGgt
acgttaatgaggaaggaagggggtgttgaagcaggagggaacgaggggag
aaaggggagagcgaggcccatccatgacactcattttacccggtccaatg
taacgcacaccgacatacacacaccagGAGACGGGCGAGCGGTTTTGCGA
GCCATTGGACTACATCTTTTTGTCGCCAGAGTGGAGAGTGGTCGATGCCG
TTCAACTTCAGAGCAAAAAAGATGCCCTCAACTTGCCCTGCCCTTTTCCT
GATCAGGTAGGCAAGGGAGGAAGGGAAGCTTGGGGAAGAGAGTGGACGGG
TTGAATGAGCTCGAGGAGACAAGGATGCGTGAACATTTAGAAATACGATC
TCATTCGGTCATATTTATCGATTTCATTTTCTACAGGACGAGCCGTCGGA
TCATGTCATGCTGTGGGCGGACTTGAGCCTGGAAAAATAACAGCCCAGGC
GTGTGGAAGGTTGTTTAATCTGAAGAGAGGGGCAAAGAGATATAAATGTC
GCGAAAAAGAACCAAAGCATGGTACTCATTAAGTATTATATTCAGACAAT
ATTTCAATAC
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protein sequence of NO20G02040.1

>NO20G02040.1-protein ID=NO20G02040.1-protein|Name=NO20G02040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=414bp
MPLLYPAGSVLSRPASPRWLQPHKLARSLCVLLLMYAALLSPLRHQARAF
NTLRPLSMSMPAVSTPLAQRLRVVTYNILTPNYATPRDLPAHPAVHLNEQ
ERLQKILTKLKAETVQGSVIALQEISRAWAGHLHVFFAREGYHFVHSGYG
RPSSGFMGVGLAWPHSTLKAATVDISRLADAKPWPAPPPPGALTSLSRGL
LRPFRRLLGTRGRGNGKDEDVMAAARDRSNTVIMAQLRSKESEGLDFFIA
CYHMPCEFRRPPIMTVHAALLVQRLQALAQGKPHIVTGDFNFQPTWPQYQ
LITEGEMPTEHAHYPPMPPTDPWTPRVEQPLKSALKVKWGQEPDFTCHSY
ADRETGERFCEPLDYIFLSPEWRVVDAVQLQSKKDALNLPCPFPDQDEPS
DHVMLWADLSLEK*
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protein sequence of NO20G02040.2

>NO20G02040.2-protein ID=NO20G02040.2-protein|Name=NO20G02040.2|organism=Nannochloropsis oceanica|type=polypeptide|length=383bp
MPLLYPAGSVLSRPASPRWLQPHKLARSLCVLLLMYAALLSPLRHQARAF
NTLRPLSMSMPAVSTPLAQRLRVVTYNILTPNYATPRDLPAHPAVHLNEQ
ERLQKILTKLKAETVQGSVIALQEISRAWAGHLHVFFAREGYHFVHSGYG
RPSSGFMGVGLAWPHSTLKAATVDISRLADAKPWPAPPPPGALTSLSRGL
LRPFRRLLGTRGRGNGKDEDVMAAARDRSNTVIMAQLRSKESEGLDFFIA
CYHMPCEFRRPPIMTVHAALLVQRLQALAQGKPHIVTVCINKYGTGGGER
EKRWWSKMLRERIGMRICVPCLSFSHHQLLHLPSPPLSPFAHRVTLISNP
RGRSTSSSRRAKCPPSTPTTRPCLPPTRGPPA*
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protein sequence of NO20G02040.3

>NO20G02040.3-protein ID=NO20G02040.3-protein|Name=NO20G02040.3|organism=Nannochloropsis oceanica|type=polypeptide|length=412bp
MPLLYPAGSVLSRPASPRWLQPHKLARSLCVLLLMYAALLSPLRHQARAF
NTLRPLSMSMPAVSTPLAQRLRVVTYNILTPNYATPRDLPAHPAVHLNEQ
ERLQKILTKLKAETVQGSVIALQEISRAWAGHLHVFFAREGYHFVHSGYG
RPSSGFMGVGLAWPHSTLKAATVDISRLADAKPWPAPPPPGALTSLSRGL
LRPFRRLLGTRGRGNGKDEDVMAAARDRSNTVIMAQLRSKESEGLDFFIA
CYHMPCEFRRPPIMTVHAALLVQRLQALAQGKPHIVTGDFNFQPTWPQYQ
LITEGEMPTEHAHYPPMPPTDPWTPRVEQPLKSALKVKWGQEPDFTCHSY
ADRETGERFCEPLDYIFLSPEWRVVDAVQLQSKKDALNLPCPFPDQVGKG
GREAWGREWTG*
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Synonyms
Publications