NO20G01970, NO20G01970 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01970 vs. NCBI_GenBank
Match: EWM22061.1 (chaperone -domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 301.2 bits (770), Expect = 6.700e-78 Identity = 165/256 (64.45%), Postives = 189/256 (73.83%), Query Frame = 0 Query: 316 SHAGSSASSTPF-TRRGRVPPTDEHAQAEMMSAAFGGGAGGPGTISFEDMMTQQERSMHGGSGDESATVRARLAAKLVLETDALLYGGQGGSGGAGL---EIGDXXXXXXXXXMIEGKKAALLRDRTGKEIARILREGEKDDPNWYAVLGISRRASAQTVKDSFRRLVLLIHPDKTASRGAQEAFQLVQEAYESLSGPSERRAYDLYLVKLRTKHWKQRIRPLKDKLDELSDYYEPVLERKGKIALGAFLVWALVL 568 S+ G+++ + F +RGRVPPT + AQAEMMSAAFG G SFE+M +Q + +G+E+ T RA LAAKLVLETDALLYGG GG GA L E GD G K L++DRT KEI RILREGE+++PNWY VLGISRRA AQ VKDSFRRLVLLIHPDKT+ GAQEAFQLVQEAYESLS P ER AYD YLVKLR K WKQR+RPL DK+DE SDYYEP+LERKG+IA AFL+WALVL Sbjct: 278 SNRGTTSRFSSFHAQRGRVPPTSDEAQAEMMSAAFGSVR---GKASFEEMNSQHQGGTVDRTGEENGTARAHLAAKLVLETDALLYGGHGGPVGATLLEVEGGDEDWENGEGAGSAGMKNVLVKDRTSKEIQRILREGEREEPNWYVVLGISRRAQAQAVKDSFRRLVLLIHPDKTSHLGAQEAFQLVQEAYESLSSPIERLAYDQYLVKLRAKRWKQRLRPLVDKVDEFSDYYEPILERKGQIAAAAFLLWALVL 530
BLAST of NO20G01970 vs. NCBI_GenBank
Match: EOY30211.1 (Uncharacterized protein TCM_037493 [Theobroma cacao]) HSP 1 Score: 73.6 bits (179), Expect = 2.300e-9 Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 0 Query: 447 REGEKDDPNWYAVLGI-SRRASAQTVKDSFRRLVLLIHPDKTASRGAQEAFQLVQEAYESLSGPSERRAYD 517 +E P+WYAVLGI R A A+ +K++F++ L +HPDK +S A +AF+LV EA+ LS PS R+AYD Sbjct: 50 QEKTNGGPDWYAVLGIRDRNADAEAIKNAFKKRALKVHPDKNSSAAADDAFKLVSEAWRVLSEPSSRQAYD 120
BLAST of NO20G01970 vs. NCBI_GenBank
Match: EYU33449.1 (hypothetical protein MIMGU_mgv1a002004mg [Erythranthe guttata]) HSP 1 Score: 72.8 bits (177), Expect = 3.900e-9 Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 0 Query: 453 DPNWYAVLGISRRASAQTVKDSFRRLVLLIHPDKTASRGAQEAFQLVQEAYESLSGPSERRAYDL 518 + NWY VLG++ A +T++ +R+L LL+HPDK S GA+ AFQLV +A+ LS S+R AYDL Sbjct: 65 ESNWYGVLGLTPLADDETIRKQYRKLALLLHPDKNRSIGAEGAFQLVSQAWSLLSDKSKRAAYDL 129
BLAST of NO20G01970 vs. NCBI_GenBank
Match: XP_012842141.1 (PREDICTED: uncharacterized protein LOC105962385 [Erythranthe guttata]) HSP 1 Score: 72.8 bits (177), Expect = 3.900e-9 Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 0 Query: 453 DPNWYAVLGISRRASAQTVKDSFRRLVLLIHPDKTASRGAQEAFQLVQEAYESLSGPSERRAYDL 518 + NWY VLG++ A +T++ +R+L LL+HPDK S GA+ AFQLV +A+ LS S+R AYDL Sbjct: 65 ESNWYGVLGLTPLADDETIRKQYRKLALLLHPDKNRSIGAEGAFQLVSQAWSLLSDKSKRAAYDL 129
BLAST of NO20G01970 vs. NCBI_GenBank
Match: XP_020589495.1 (uncharacterized protein LOC110030878 [Phalaenopsis equestris] >XP_020589496.1 uncharacterized protein LOC110030878 [Phalaenopsis equestris]) HSP 1 Score: 72.8 bits (177), Expect = 3.900e-9 Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 0 Query: 449 GEKDDPNWYAVLGISRRASAQTVKDSFRRLVLLIHPDKTASRGAQEAFQLVQEAYESLSGPSERRAYDL 518 GEKD WY +L ++ A +TVK+ +R+L L++HPDK S GA+ AFQLV EA+ LS +++ AYDL Sbjct: 63 GEKD---WYGILRVNASADEETVKNHYRKLALMLHPDKNKSAGAEGAFQLVSEAWSVLSNKNQKMAYDL 128
BLAST of NO20G01970 vs. NCBI_GenBank
Match: PSN49798.1 (DnaJ subfamily B member 9 [Blattella germanica]) HSP 1 Score: 72.0 bits (175), Expect = 6.600e-9 Identity = 34/72 (47.22%), Postives = 51/72 (70.83%), Query Frame = 0 Query: 447 REGEKDDPNWYAVLGISRRASAQTVKDSFRRLVLLIHPDKTASRGAQEAFQLVQEAYESLSGPSERRAYDLY 519 RE +KD +YA+LG+SR+A+ + +K SFR+L + HPDK +GA++ FQ + EAYE LS P +R+ YD + Sbjct: 22 REEKKD---YYALLGVSRKATDREIKKSFRKLAIKYHPDKNKEKGAEKKFQELAEAYEVLSDPDKRKKYDQF 90
BLAST of NO20G01970 vs. NCBI_GenBank
Match: XP_007781841.1 (hypothetical protein W97_05769 [Coniosporium apollinis CBS 100218] >EON66524.1 hypothetical protein W97_05769 [Coniosporium apollinis CBS 100218]) HSP 1 Score: 71.6 bits (174), Expect = 8.700e-9 Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 0 Query: 455 NWYAVLGISRRASAQTVKDSFRRLVLLIHPDKTASRG-AQEAFQLVQEAYESLSGPSERRAYDLYLVKLRTKHWKQR 531 ++YAVL +S A +T+K SFRRL L+HPDK + A +FQL+Q AYE +S P +RR YD +R + W Q+ Sbjct: 9 DYYAVLEVSNSADNETIKKSFRRLARLLHPDKNPGKATATASFQLLQRAYEIVSDPEQRRVYDTVWESIRDRLWAQQ 85
BLAST of NO20G01970 vs. NCBI_GenBank
Match: KXS18462.1 (hypothetical protein M427DRAFT_53842 [Gonapodya prolifera JEL478]) HSP 1 Score: 71.6 bits (174), Expect = 8.700e-9 Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 0 Query: 434 LRDRTGKEIARILREGEKDDPNWYAVLGISRRASAQTVKDSFRRLVLLIHPDK----TASRGAQEAFQLVQEAYESLSGPSERRAYDLY 519 L DR +EIA PN+YA+L + + AS Q V+D+++RL ++ HPDK A AQ FQ +Q AY+ LS ++R AYD+Y Sbjct: 47 LEDRLDEEIA----GANTSSPNYYAILNLDKNASDQDVRDAYKRLSMIFHPDKHRDTAAKEAAQRKFQTIQRAYDVLSEGAKRTAYDMY 131
BLAST of NO20G01970 vs. NCBI_GenBank
Match: XP_007199347.1 (uncharacterized protein LOC18767133 [Prunus persica] >XP_020425393.1 uncharacterized protein LOC18767133 [Prunus persica] >XP_020425394.1 uncharacterized protein LOC18767133 [Prunus persica] >XP_020425395.1 uncharacterized protein LOC18767133 [Prunus persica] >ONH91881.1 hypothetical protein PRUPE_8G141600 [Prunus persica] >ONH91882.1 hypothetical protein PRUPE_8G141600 [Prunus persica] >ONH91883.1 hypothetical protein PRUPE_8G141600 [Prunus persica] >ONH91884.1 hypothetical protein PRUPE_8G141600 [Prunus persica] >ONH91885.1 hypothetical protein PRUPE_8G141600 [Prunus persica] >ONH91886.1 hypothetical protein PRUPE_8G141600 [Prunus persica]) HSP 1 Score: 71.2 bits (173), Expect = 1.100e-8 Identity = 33/77 (42.86%), Postives = 49/77 (63.64%), Query Frame = 0 Query: 444 RILREGEK-DDPNWYAVLGISRRASAQTVKDSFRRLVLLIHPDKTASRGAQEAFQLVQEAYESLSGPSERRAYDLYL 520 +ILR K DPNWY +L + A T+K ++++L L+HPDK G++EAF+LV EA+ LS +R+ YD+ L Sbjct: 54 KILRTASKTPDPNWYKILQVEPFAHTNTIKKNYKKLAFLLHPDKNPHAGSEEAFKLVSEAFRFLSDKLKRKEYDMRL 130
BLAST of NO20G01970 vs. NCBI_GenBank
Match: XP_004975834.1 (uncharacterized protein LOC101771020 isoform X1 [Setaria italica]) HSP 1 Score: 71.2 bits (173), Expect = 1.100e-8 Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 0 Query: 449 GEKDDPNWYAVLGISRRASAQTVKDSFRRLVLLIHPDKTASRGAQEAFQLVQEAYESLSGPSERRAYD 517 GEKD WY++L ++ A +T+K +R+LVLL+HPDK GA+ AFQ+V+EAY LS ++R YD Sbjct: 63 GEKD---WYSILSVTTAADDETIKKQYRKLVLLLHPDKNKQVGAEGAFQMVKEAYTVLSDKTKRAVYD 127 The following BLAST results are available for this feature:
BLAST of NO20G01970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01970 ID=NO20G01970|Name=NO20G01970|organism=Nannochloropsis oceanica|type=gene|length=1704bpback to top protein sequence of NO20G01970.1 >NO20G01970.1-protein ID=NO20G01970.1-protein|Name=NO20G01970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=568bpback to top Synonyms
Publications
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