NO20G01960, NO20G01960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO20G01960 vs. NCBI_GenBank
Match: XP_005856090.1 (hypothetical protein NGA_2078500 [Nannochloropsis gaditana CCMP526] >EKU20271.1 hypothetical protein NGA_2078500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 277.7 bits (709), Expect = 4.100e-71 Identity = 142/215 (66.05%), Postives = 170/215 (79.07%), Query Frame = 0 Query: 79 RIVESVAGVMVDVPDGVDLVPGVYEGGLKVWESSVDLVRYLQQHNLVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLNQHVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSVVDLGARASALGFESRVVASVEDGKSNIRDLIEITWK 294 R+V++V GV+ D+P+G DLVPGVYEGGLK+WESS DLV YLQ +++ +RVLELGCGHGLPGIHALQQGA SV F DLNEEVLREVT PNI LNV + S R++L+ GDWEA ++L P F+VIVSAETFYT VT KLL IHR+LA+ P A+A+VAGKRYYFGTGGSV +L ++ASALG SRVVAS EDG+SNIRD++EI K Sbjct: 72 RVVKNVEGVIADLPEGSDLVPGVYEGGLKIWESSKDLVCYLQNQRIIRPPYRVLELGCGHGLPGIHALQQGADSVVFSDLNEEVLREVTRPNIFLNVANRALSSARISLICGDWEALPQILGVDKPVDFNVIVSAETFYTPAVTNKLLRCIHRYLAKTPE-ALALVAGKRYYFGTGGSVANLMSQASALGMRSRVVASSEDGRSNIRDIVEIRCK 285
BLAST of NO20G01960 vs. NCBI_GenBank
Match: EWM22047.1 (Nicotinamide N-methyltransferase, putative [Nannochloropsis gaditana]) HSP 1 Score: 276.2 bits (705), Expect = 1.200e-70 Identity = 142/215 (66.05%), Postives = 169/215 (78.60%), Query Frame = 0 Query: 79 RIVESVAGVMVDVPDGVDLVPGVYEGGLKVWESSVDLVRYLQQHNLVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLNQHVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSVVDLGARASALGFESRVVASVEDGKSNIRDLIEITWK 294 R+V++V GV+ D+P+G DLVPGVYEGGLK+WESS DLV YLQ +++ +RVLELGCGHGLPGIHALQQGA SV F DLNEEVLREVT PNI LNV + S R++L+ GDWEA ++L P F+VIVSAETFYT VT KLL IHR+LA P A+A+VAGKRYYFGTGGSV +L ++ASALG SRVVAS EDG+SNIRD++EI K Sbjct: 72 RVVKNVEGVIADLPEGSDLVPGVYEGGLKIWESSKDLVCYLQNQRIIRPLYRVLELGCGHGLPGIHALQQGADSVVFSDLNEEVLREVTRPNIFLNVANRALSSARISLICGDWEALPQILGVDKPVDFNVIVSAETFYTPAVTNKLLRCIHRYLATTPE-ALALVAGKRYYFGTGGSVANLMSQASALGMRSRVVASSEDGRSNIRDIVEIRCK 285
BLAST of NO20G01960 vs. NCBI_GenBank
Match: XP_008863780.1 (hypothetical protein H310_02144 [Aphanomyces invadans] >ETW07687.1 hypothetical protein H310_02144 [Aphanomyces invadans]) HSP 1 Score: 171.8 bits (434), Expect = 3.200e-39 Identity = 99/202 (49.01%), Postives = 132/202 (65.35%), Query Frame = 0 Query: 96 DLVPGVYEGGLKVWESSVDLVRYLQQH--NL-VQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLNQH-VPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSVVDLGARASALG-FESRVVASVEDGKSNIRDLIEITW 293 D+ GVYEGG K+WE +VDL++YL + NL V RVLELGCGHGLPG+HALQQGAA VTF D N EV+ T PN+ N ++ +DL+K T SGDW+ SE + H FD+I++AET YT V+ +L TI RHL R+ G +A+VA K YYFGTGGSV + + G +R V D KSN+R+++ +++ Sbjct: 86 DIQTGVYEGGFKLWECAVDLIQYLAANAPNLPVHNGWRVLELGCGHGLPGLHALQQGAAHVTFSDYNHEVIELATIPNLQRNANA-NDLTK-ATFYSGDWQLMSEDMLAHGTDMEFDLILTAETIYTESVSVELFQTIQRHLKRR--GGIALVAAKSYYFGTGGSVHHFKSLVAQDGTMVARTVWESNDAKSNVREIVHVSY 283
BLAST of NO20G01960 vs. NCBI_GenBank
Match: OQR89230.1 (hypothetical protein THRCLA_09844 [Thraustotheca clavata]) HSP 1 Score: 166.0 bits (419), Expect = 1.700e-37 Identity = 98/213 (46.01%), Postives = 126/213 (59.15%), Query Frame = 0 Query: 86 GVMVDVPDGVDLVPGVYEGGLKVWESSVDLVRYLQQHN----LVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLN-QHVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSVVDLGARASALG-FESRVVASVEDGKSNIRDLIEITW 293 G + + D DL GVYEGG K+WE S+DL++YLQQH + RV+ELGCGHGLPGI+ALQQGA+ V F D N EV+ T PN +T + + SGDW S+ ++ FDVI+SAET YT VT LL I RHL P +A++A K YYFGTGGSV A G ++ V DGKSNIR++I++T+ Sbjct: 398 GALHKLLDTSDLENGVYEGGFKLWECSIDLIKYLQQHQDTIPIGAQELRVMELGCGHGLPGIYALQQGASHVLFSDYNSEVIDLATIPNAKRCAPTT---IHKASFYSGDWANVSQAMSISGANMYFDVILSAETMYTEQVTTFLLEMIKRHL---KPNGIALIAAKSYYFGTGGSVHHFKTLIQAQGVMKATTVWQSSDGKSNIREIIQVTF 604
BLAST of NO20G01960 vs. NCBI_GenBank
Match: XP_008607032.1 (hypothetical protein SDRG_03186 [Saprolegnia diclina VS20] >EQC39760.1 hypothetical protein SDRG_03186 [Saprolegnia diclina VS20]) HSP 1 Score: 163.7 bits (413), Expect = 8.700e-37 Identity = 96/205 (46.83%), Postives = 124/205 (60.49%), Query Frame = 0 Query: 96 DLVPGVYEGGLKVWESSVDLVRYLQQHN----LVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLNQHVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSV---VDLGARASALGFESRVVASVEDGKSNIRDLIEITWK 294 DL GVYEGG K+WE S+DL+ YLQQH + RV+ELGCGHGLPGI ALQQGA+ V F D N EV+ T PN + D + SGDW SE + + A++D++++AET YT VT LL I RHL R VA+VA K YYFGTGGSV DL AR + + V + D +SNIR+++++T+K Sbjct: 77 DLETGVYEGGFKLWECSIDLIEYLQQHQADFPIGACGLRVMELGCGHGLPGIFALQQGASHVLFSDYNSEVIELATIPN---TMRCAGDRLHHASFYSGDWANVSEAMAANEDASYDLVLTAETLYTEDVTISLLAMIKRHLKR---SGVALVAAKTYYFGTGGSVHHFKDLVAREGDM--VATTVWNGNDCRSNIREIVQVTYK 273
BLAST of NO20G01960 vs. NCBI_GenBank
Match: CCA14269.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 161.8 bits (408), Expect = 3.300e-36 Identity = 95/215 (44.19%), Postives = 127/215 (59.07%), Query Frame = 0 Query: 85 AGVMVDVPDGVDLVPGVYEGGLKVWESSVDLVRYLQQ--HNLVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVD-STDDLSKRVTLVSGDWEAASEVLNQHVPAAF-----DVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSV---VDLGARASALGFESRVVASVEDGKSNIRDLI 289 A M + D+ G+YEGG K+WE S+DLV YL + L V+ELGCGHGLPGI+AL GA VTF D N EVL VT PN+ N D + +RV+L +G WE ++ ++ D+I+SAET YT VT++L I RHL P A+A++A KRYYFGTGGSV +DL A F ++VV +D +SNIR+++ Sbjct: 101 AETMQSILSSSDIKSGLYEGGFKIWECSLDLVAYLNEIVAQGYALPPHVMELGCGHGLPGIYALMNGAERVTFTDYNREVLSLVTIPNLIKNSQIPVDQIRERVSLYAGAWETVTQYMHDDEKQCLTRYQADLILSAETLYTECVTKELYQMIKRHLHVSNPNAIALIASKRYYFGTGGSVQHFLDLVNNDDA-HFNAQVVWCADDHRSNIREIV 314
BLAST of NO20G01960 vs. NCBI_GenBank
Match: ETK91247.1 (hypothetical protein L915_05127 [Phytophthora parasitica] >ETL44647.1 hypothetical protein L916_05083 [Phytophthora parasitica] >ETP21135.1 hypothetical protein F441_05267 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 160.6 bits (405), Expect = 7.300e-36 Identity = 91/206 (44.17%), Postives = 124/206 (60.19%), Query Frame = 0 Query: 96 DLVPGVYEGGLKVWESSVDLVRYLQ---QHNLVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLNQ-----HVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSVVDLGARASALG-FESRVVASVEDGKSNIRDLIEITW 293 D+ GVYEGG K+WE +VDLV++++ + +Q+ VLELGCGHGLPGIHALQ+GA V F D N+EVL T PN+ N +L + +G W + S+ +N FD+I++AET YT V +L TI RHL R+ P A A+VA K+YYFGT GSV A G F + V D KSNIR+++++T+ Sbjct: 78 DVETGVYEGGFKLWECAVDLVKFVETQLRQEKLQMPPSVLELGCGHGLPGIHALQRGAERVVFSDYNKEVLELTTCPNVHRN---AQELYNKAEFYTGGWTSMSQYMNDVEHQTEEQMQFDLILTAETIYTETVAVELYQTIKRHL-RRSPNARALVAAKKYYFGTNGSVQHFVGLVQADGVFRAETVWEERDCKSNIREIVQLTY 279
BLAST of NO20G01960 vs. NCBI_GenBank
Match: ETO80110.1 (hypothetical protein F444_05308 [Phytophthora parasitica P1976]) HSP 1 Score: 160.6 bits (405), Expect = 7.300e-36 Identity = 91/206 (44.17%), Postives = 124/206 (60.19%), Query Frame = 0 Query: 96 DLVPGVYEGGLKVWESSVDLVRYLQ---QHNLVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLNQ-----HVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSVVDLGARASALG-FESRVVASVEDGKSNIRDLIEITW 293 D+ GVYEGG K+WE +VDLV++++ + +Q+ VLELGCGHGLPGIHALQ+GA V F D N+EVL T PN+ N +L + +G W + S+ +N FD+I++AET YT V +L TI RHL R+ P A A+VA K+YYFGT GSV A G F + V D KSNIR+++++T+ Sbjct: 78 DVETGVYEGGFKLWECAVDLVKFVETQLRQEKLQMPPSVLELGCGHGLPGIHALQRGAERVVFSDYNKEVLELTTCPNVHRN---AQELYNKAEFYAGGWTSMSQYMNDVEHQTEEQMQFDLILTAETIYTETVAVELYQTIKRHL-RRSPNARALVAAKKYYFGTNGSVQHFVGLVQADGVFRAETVWEERDCKSNIREIVQLTY 279
BLAST of NO20G01960 vs. NCBI_GenBank
Match: XP_012195402.1 (hypothetical protein SPRG_01645 [Saprolegnia parasitica CBS 223.65] >KDO33764.1 hypothetical protein SPRG_01645 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 160.6 bits (405), Expect = 7.300e-36 Identity = 97/207 (46.86%), Postives = 124/207 (59.90%), Query Frame = 0 Query: 96 DLVPGVYEGGLKVWESSVDLVRYLQQHN----LVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVL--NQHVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSV---VDLGARASALGFESRVVASVEDGKSNIRDLIEITWK 294 DL GVYEGG K+WE S+DL+ YLQQH + RV+ELGCGHGLPGI ALQQGA+ V F D N EV+ T PN + D + + SGDW SE + + A+D+I++AET YT VT LL I RHL R VA+VA K YYFGTGGSV DL AR + + V + D +SNIR+++++T+K Sbjct: 79 DLETGVYEGGFKLWECSIDLIEYLQQHKADFPIGDRGLRVMELGCGHGLPGIFALQQGASHVLFSDYNSEVIELATIPN---TLRCAGDRLQHASFYSGDWAHVSEAMAATGAIEDAYDLILTAETLYTEDVTSALLAMIKRHLKR---SGVALVAAKTYYFGTGGSVHHFKDLVAREGDM--VATTVWNGNDCRSNIREIVQVTYK 277
BLAST of NO20G01960 vs. NCBI_GenBank
Match: OQR84913.1 (hypothetical protein ACHHYP_20619 [Achlya hypogyna]) HSP 1 Score: 160.6 bits (405), Expect = 7.300e-36 Identity = 98/204 (48.04%), Postives = 123/204 (60.29%), Query Frame = 0 Query: 96 DLVPGVYEGGLKVWESSVDLVRYLQQH----NLVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLN-QHVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSVVDLGARASALG-FESRVVASVEDGKSNIRDLIEITWK 294 DL GVYEGG K+WE SVDL+ YL+ H + RV+ELGCGHGLPGI+ALQQGAA V F D N EV+ T PN V S R T SGDW S + + +D+I++AET YT VT LL TI RHL P VA+VA K YYFGTGGSV L + +A G + V + D +SNIR+++++T+K Sbjct: 78 DLETGVYEGGFKLWECSVDLIEYLEAHKEAFGIGTRSLRVMELGCGHGLPGIYALQQGAAHVLFSDYNSEVIDLATIPN-AQRVASAH--LNRATFYSGDWGHMSAAMTAANEDTEYDLILTAETLYTEEVTIALLETIKRHL---KPSGVALVAAKTYYFGTGGSVHHLKSLIAATGTMVATTVWNGNDCRSNIREIVQVTYK 275 The following BLAST results are available for this feature:
BLAST of NO20G01960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO20G01960 ID=NO20G01960|Name=NO20G01960|organism=Nannochloropsis oceanica|type=gene|length=882bpback to top protein sequence of NO20G01960.1 >NO20G01960.1-protein ID=NO20G01960.1-protein|Name=NO20G01960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=294bpback to top Synonyms
Publications
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