NO20G01960, NO20G01960 (gene) Nannochloropsis oceanica

Overview
NameNO20G01960
Unique NameNO20G01960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length882
Alignment locationchr20:583305..584186 +

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Properties
Property NameValue
DescriptionHistidine protein methyltransferase 1 homolog
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:583305..584186 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR019410Nicotinamide_N-MeTfrase-like
Homology
BLAST of NO20G01960 vs. NCBI_GenBank
Match: XP_005856090.1 (hypothetical protein NGA_2078500 [Nannochloropsis gaditana CCMP526] >EKU20271.1 hypothetical protein NGA_2078500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 277.7 bits (709), Expect = 4.100e-71
Identity = 142/215 (66.05%), Postives = 170/215 (79.07%), Query Frame = 0
Query:   79 RIVESVAGVMVDVPDGVDLVPGVYEGGLKVWESSVDLVRYLQQHNLVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLNQHVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSVVDLGARASALGFESRVVASVEDGKSNIRDLIEITWK 294
            R+V++V GV+ D+P+G DLVPGVYEGGLK+WESS DLV YLQ   +++  +RVLELGCGHGLPGIHALQQGA SV F DLNEEVLREVT PNI LNV +    S R++L+ GDWEA  ++L    P  F+VIVSAETFYT  VT KLL  IHR+LA+ P  A+A+VAGKRYYFGTGGSV +L ++ASALG  SRVVAS EDG+SNIRD++EI  K
Sbjct:   72 RVVKNVEGVIADLPEGSDLVPGVYEGGLKIWESSKDLVCYLQNQRIIRPPYRVLELGCGHGLPGIHALQQGADSVVFSDLNEEVLREVTRPNIFLNVANRALSSARISLICGDWEALPQILGVDKPVDFNVIVSAETFYTPAVTNKLLRCIHRYLAKTPE-ALALVAGKRYYFGTGGSVANLMSQASALGMRSRVVASSEDGRSNIRDIVEIRCK 285          
BLAST of NO20G01960 vs. NCBI_GenBank
Match: EWM22047.1 (Nicotinamide N-methyltransferase, putative [Nannochloropsis gaditana])

HSP 1 Score: 276.2 bits (705), Expect = 1.200e-70
Identity = 142/215 (66.05%), Postives = 169/215 (78.60%), Query Frame = 0
Query:   79 RIVESVAGVMVDVPDGVDLVPGVYEGGLKVWESSVDLVRYLQQHNLVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLNQHVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSVVDLGARASALGFESRVVASVEDGKSNIRDLIEITWK 294
            R+V++V GV+ D+P+G DLVPGVYEGGLK+WESS DLV YLQ   +++  +RVLELGCGHGLPGIHALQQGA SV F DLNEEVLREVT PNI LNV +    S R++L+ GDWEA  ++L    P  F+VIVSAETFYT  VT KLL  IHR+LA  P  A+A+VAGKRYYFGTGGSV +L ++ASALG  SRVVAS EDG+SNIRD++EI  K
Sbjct:   72 RVVKNVEGVIADLPEGSDLVPGVYEGGLKIWESSKDLVCYLQNQRIIRPLYRVLELGCGHGLPGIHALQQGADSVVFSDLNEEVLREVTRPNIFLNVANRALSSARISLICGDWEALPQILGVDKPVDFNVIVSAETFYTPAVTNKLLRCIHRYLATTPE-ALALVAGKRYYFGTGGSVANLMSQASALGMRSRVVASSEDGRSNIRDIVEIRCK 285          
BLAST of NO20G01960 vs. NCBI_GenBank
Match: XP_008863780.1 (hypothetical protein H310_02144 [Aphanomyces invadans] >ETW07687.1 hypothetical protein H310_02144 [Aphanomyces invadans])

HSP 1 Score: 171.8 bits (434), Expect = 3.200e-39
Identity = 99/202 (49.01%), Postives = 132/202 (65.35%), Query Frame = 0
Query:   96 DLVPGVYEGGLKVWESSVDLVRYLQQH--NL-VQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLNQH-VPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSVVDLGARASALG-FESRVVASVEDGKSNIRDLIEITW 293
            D+  GVYEGG K+WE +VDL++YL  +  NL V    RVLELGCGHGLPG+HALQQGAA VTF D N EV+   T PN+  N ++ +DL+K  T  SGDW+  SE +  H     FD+I++AET YT  V+ +L  TI RHL R+  G +A+VA K YYFGTGGSV    +  +  G   +R V    D KSN+R+++ +++
Sbjct:   86 DIQTGVYEGGFKLWECAVDLIQYLAANAPNLPVHNGWRVLELGCGHGLPGLHALQQGAAHVTFSDYNHEVIELATIPNLQRNANA-NDLTK-ATFYSGDWQLMSEDMLAHGTDMEFDLILTAETIYTESVSVELFQTIQRHLKRR--GGIALVAAKSYYFGTGGSVHHFKSLVAQDGTMVARTVWESNDAKSNVREIVHVSY 283          
BLAST of NO20G01960 vs. NCBI_GenBank
Match: OQR89230.1 (hypothetical protein THRCLA_09844 [Thraustotheca clavata])

HSP 1 Score: 166.0 bits (419), Expect = 1.700e-37
Identity = 98/213 (46.01%), Postives = 126/213 (59.15%), Query Frame = 0
Query:   86 GVMVDVPDGVDLVPGVYEGGLKVWESSVDLVRYLQQHN----LVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLN-QHVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSVVDLGARASALG-FESRVVASVEDGKSNIRDLIEITW 293
            G +  + D  DL  GVYEGG K+WE S+DL++YLQQH     +     RV+ELGCGHGLPGI+ALQQGA+ V F D N EV+   T PN      +T     + +  SGDW   S+ ++       FDVI+SAET YT  VT  LL  I RHL    P  +A++A K YYFGTGGSV        A G  ++  V    DGKSNIR++I++T+
Sbjct:  398 GALHKLLDTSDLENGVYEGGFKLWECSIDLIKYLQQHQDTIPIGAQELRVMELGCGHGLPGIYALQQGASHVLFSDYNSEVIDLATIPNAKRCAPTT---IHKASFYSGDWANVSQAMSISGANMYFDVILSAETMYTEQVTTFLLEMIKRHL---KPNGIALIAAKSYYFGTGGSVHHFKTLIQAQGVMKATTVWQSSDGKSNIREIIQVTF 604          
BLAST of NO20G01960 vs. NCBI_GenBank
Match: XP_008607032.1 (hypothetical protein SDRG_03186 [Saprolegnia diclina VS20] >EQC39760.1 hypothetical protein SDRG_03186 [Saprolegnia diclina VS20])

HSP 1 Score: 163.7 bits (413), Expect = 8.700e-37
Identity = 96/205 (46.83%), Postives = 124/205 (60.49%), Query Frame = 0
Query:   96 DLVPGVYEGGLKVWESSVDLVRYLQQHN----LVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLNQHVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSV---VDLGARASALGFESRVVASVEDGKSNIRDLIEITWK 294
            DL  GVYEGG K+WE S+DL+ YLQQH     +     RV+ELGCGHGLPGI ALQQGA+ V F D N EV+   T PN    +    D     +  SGDW   SE +  +  A++D++++AET YT  VT  LL  I RHL R     VA+VA K YYFGTGGSV    DL AR   +   +  V +  D +SNIR+++++T+K
Sbjct:   77 DLETGVYEGGFKLWECSIDLIEYLQQHQADFPIGACGLRVMELGCGHGLPGIFALQQGASHVLFSDYNSEVIELATIPN---TMRCAGDRLHHASFYSGDWANVSEAMAANEDASYDLVLTAETLYTEDVTISLLAMIKRHLKR---SGVALVAAKTYYFGTGGSVHHFKDLVAREGDM--VATTVWNGNDCRSNIREIVQVTYK 273          
BLAST of NO20G01960 vs. NCBI_GenBank
Match: CCA14269.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 161.8 bits (408), Expect = 3.300e-36
Identity = 95/215 (44.19%), Postives = 127/215 (59.07%), Query Frame = 0
Query:   85 AGVMVDVPDGVDLVPGVYEGGLKVWESSVDLVRYLQQ--HNLVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVD-STDDLSKRVTLVSGDWEAASEVLNQHVPAAF-----DVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSV---VDLGARASALGFESRVVASVEDGKSNIRDLI 289
            A  M  +    D+  G+YEGG K+WE S+DLV YL +       L   V+ELGCGHGLPGI+AL  GA  VTF D N EVL  VT PN+  N     D + +RV+L +G WE  ++ ++            D+I+SAET YT  VT++L   I RHL    P A+A++A KRYYFGTGGSV   +DL     A  F ++VV   +D +SNIR+++
Sbjct:  101 AETMQSILSSSDIKSGLYEGGFKIWECSLDLVAYLNEIVAQGYALPPHVMELGCGHGLPGIYALMNGAERVTFTDYNREVLSLVTIPNLIKNSQIPVDQIRERVSLYAGAWETVTQYMHDDEKQCLTRYQADLILSAETLYTECVTKELYQMIKRHLHVSNPNAIALIASKRYYFGTGGSVQHFLDLVNNDDA-HFNAQVVWCADDHRSNIREIV 314          
BLAST of NO20G01960 vs. NCBI_GenBank
Match: ETK91247.1 (hypothetical protein L915_05127 [Phytophthora parasitica] >ETL44647.1 hypothetical protein L916_05083 [Phytophthora parasitica] >ETP21135.1 hypothetical protein F441_05267 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 160.6 bits (405), Expect = 7.300e-36
Identity = 91/206 (44.17%), Postives = 124/206 (60.19%), Query Frame = 0
Query:   96 DLVPGVYEGGLKVWESSVDLVRYLQ---QHNLVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLNQ-----HVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSVVDLGARASALG-FESRVVASVEDGKSNIRDLIEITW 293
            D+  GVYEGG K+WE +VDLV++++   +   +Q+   VLELGCGHGLPGIHALQ+GA  V F D N+EVL   T PN+  N     +L  +    +G W + S+ +N           FD+I++AET YT  V  +L  TI RHL R+ P A A+VA K+YYFGT GSV        A G F +  V    D KSNIR+++++T+
Sbjct:   78 DVETGVYEGGFKLWECAVDLVKFVETQLRQEKLQMPPSVLELGCGHGLPGIHALQRGAERVVFSDYNKEVLELTTCPNVHRN---AQELYNKAEFYTGGWTSMSQYMNDVEHQTEEQMQFDLILTAETIYTETVAVELYQTIKRHL-RRSPNARALVAAKKYYFGTNGSVQHFVGLVQADGVFRAETVWEERDCKSNIREIVQLTY 279          
BLAST of NO20G01960 vs. NCBI_GenBank
Match: ETO80110.1 (hypothetical protein F444_05308 [Phytophthora parasitica P1976])

HSP 1 Score: 160.6 bits (405), Expect = 7.300e-36
Identity = 91/206 (44.17%), Postives = 124/206 (60.19%), Query Frame = 0
Query:   96 DLVPGVYEGGLKVWESSVDLVRYLQ---QHNLVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLNQ-----HVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSVVDLGARASALG-FESRVVASVEDGKSNIRDLIEITW 293
            D+  GVYEGG K+WE +VDLV++++   +   +Q+   VLELGCGHGLPGIHALQ+GA  V F D N+EVL   T PN+  N     +L  +    +G W + S+ +N           FD+I++AET YT  V  +L  TI RHL R+ P A A+VA K+YYFGT GSV        A G F +  V    D KSNIR+++++T+
Sbjct:   78 DVETGVYEGGFKLWECAVDLVKFVETQLRQEKLQMPPSVLELGCGHGLPGIHALQRGAERVVFSDYNKEVLELTTCPNVHRN---AQELYNKAEFYAGGWTSMSQYMNDVEHQTEEQMQFDLILTAETIYTETVAVELYQTIKRHL-RRSPNARALVAAKKYYFGTNGSVQHFVGLVQADGVFRAETVWEERDCKSNIREIVQLTY 279          
BLAST of NO20G01960 vs. NCBI_GenBank
Match: XP_012195402.1 (hypothetical protein SPRG_01645 [Saprolegnia parasitica CBS 223.65] >KDO33764.1 hypothetical protein SPRG_01645 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 160.6 bits (405), Expect = 7.300e-36
Identity = 97/207 (46.86%), Postives = 124/207 (59.90%), Query Frame = 0
Query:   96 DLVPGVYEGGLKVWESSVDLVRYLQQHN----LVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVL--NQHVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSV---VDLGARASALGFESRVVASVEDGKSNIRDLIEITWK 294
            DL  GVYEGG K+WE S+DL+ YLQQH     +     RV+ELGCGHGLPGI ALQQGA+ V F D N EV+   T PN    +    D  +  +  SGDW   SE +     +  A+D+I++AET YT  VT  LL  I RHL R     VA+VA K YYFGTGGSV    DL AR   +   +  V +  D +SNIR+++++T+K
Sbjct:   79 DLETGVYEGGFKLWECSIDLIEYLQQHKADFPIGDRGLRVMELGCGHGLPGIFALQQGASHVLFSDYNSEVIELATIPN---TLRCAGDRLQHASFYSGDWAHVSEAMAATGAIEDAYDLILTAETLYTEDVTSALLAMIKRHLKR---SGVALVAAKTYYFGTGGSVHHFKDLVAREGDM--VATTVWNGNDCRSNIREIVQVTYK 277          
BLAST of NO20G01960 vs. NCBI_GenBank
Match: OQR84913.1 (hypothetical protein ACHHYP_20619 [Achlya hypogyna])

HSP 1 Score: 160.6 bits (405), Expect = 7.300e-36
Identity = 98/204 (48.04%), Postives = 123/204 (60.29%), Query Frame = 0
Query:   96 DLVPGVYEGGLKVWESSVDLVRYLQQH----NLVQLHHRVLELGCGHGLPGIHALQQGAASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLN-QHVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYYFGTGGSVVDLGARASALG-FESRVVASVEDGKSNIRDLIEITWK 294
            DL  GVYEGG K+WE SVDL+ YL+ H     +     RV+ELGCGHGLPGI+ALQQGAA V F D N EV+   T PN    V S      R T  SGDW   S  +   +    +D+I++AET YT  VT  LL TI RHL    P  VA+VA K YYFGTGGSV  L +  +A G   +  V +  D +SNIR+++++T+K
Sbjct:   78 DLETGVYEGGFKLWECSVDLIEYLEAHKEAFGIGTRSLRVMELGCGHGLPGIYALQQGAAHVLFSDYNSEVIDLATIPN-AQRVASAH--LNRATFYSGDWGHMSAAMTAANEDTEYDLILTAETLYTEEVTIALLETIKRHL---KPSGVALVAAKTYYFGTGGSVHHLKSLIAATGTMVATTVWNGNDCRSNIREIVQVTYK 275          
The following BLAST results are available for this feature:
BLAST of NO20G01960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856090.14.100e-7166.05hypothetical protein NGA_2078500 [Nannochloropsis ... [more]
EWM22047.11.200e-7066.05Nicotinamide N-methyltransferase, putative [Nannoc... [more]
XP_008863780.13.200e-3949.01hypothetical protein H310_02144 [Aphanomyces invad... [more]
OQR89230.11.700e-3746.01hypothetical protein THRCLA_09844 [Thraustotheca c... [more]
XP_008607032.18.700e-3746.83hypothetical protein SDRG_03186 [Saprolegnia dicli... [more]
CCA14269.13.300e-3644.19conserved hypothetical protein [Albugo laibachii N... [more]
ETK91247.17.300e-3644.17hypothetical protein L915_05127 [Phytophthora para... [more]
ETO80110.17.300e-3644.17hypothetical protein F444_05308 [Phytophthora para... [more]
XP_012195402.17.300e-3646.86hypothetical protein SPRG_01645 [Saprolegnia paras... [more]
OQR84913.17.300e-3648.04hypothetical protein ACHHYP_20619 [Achlya hypogyna... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL021nonsL021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR020ncniR020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR067ngnoR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002735NSK002735Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO20G01960.1NO20G01960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594950gene_6416Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100052g26gene8395Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO20G01960.1NO20G01960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO20G01960 ID=NO20G01960|Name=NO20G01960|organism=Nannochloropsis oceanica|type=gene|length=882bp
ATGTCCTTTTCCTTCAGCTTTGATCTTCCTGCCGAGCCGTTGACCACTTC
CAGCGCCAACCCCGAGCCCCTACCACTGCCCCACCCGCCATCAGGCCCGT
CGTCGACGCTCACCCCAGTGGCACCGGCTCGTCTCATCCAATTTATCGTG
CCCCCGGTATTACCTCTGTCGCGGAGCGTGTCACTGTTGGGCGATAGCGG
GGGTAGTCACCAGGTAGGCACTGGTGCTTCCATTCGGATAGTGGAGAGCG
TGGCTGGGGTGATGGTGGATGTGCCAGATGGAGTGGACCTGGTGCCCGGC
GTGTACGAAGGCGGACTCAAAGTGTGGGAATCCAGCGTGGATCTCGTACG
CTATCTTCAGCAGCACAACTTGGTGCAATTGCACCACCGTGTGCTAGAGT
TGGGCTGTGGTCATGGGCTGCCGGGCATCCACGCTTTGCAGCAAGGCGCC
GCAAGCGTGACCTTCTTGGACTTGAACGAAGAGGTGCTGCGCGAAGTGAC
CGGTCCCAACATTTGCCTCAATGTTGATAGTACGGATGACTTGTCAAAGA
GGGTAACCTTGGTCAGCGGTGACTGGGAAGCGGCATCCGAGGTTTTGAAT
CAGCATGTTCCGGCAGCGTTCGACGTGATCGTGAGCGCCGAGACCTTCTA
CACCTCCCTCGTGACGGAGAAGCTTCTAAACACCATCCATCGTCACCTCG
CACGACAACCGCCAGGAGCCGTTGCCATTGTGGCTGGCAAGCGATACTAC
TTTGGCACAGGGGGATCTGTGGTGGATCTAGGGGCTCGAGCCAGTGCCTT
AGGTTTTGAGTCCCGGGTGGTGGCCTCGGTGGAGGATGGCAAGAGCAACA
TTCGCGATCTGATAGAAATCACATGGAAATAG
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protein sequence of NO20G01960.1

>NO20G01960.1-protein ID=NO20G01960.1-protein|Name=NO20G01960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=294bp
MSFSFSFDLPAEPLTTSSANPEPLPLPHPPSGPSSTLTPVAPARLIQFIV
PPVLPLSRSVSLLGDSGGSHQVGTGASIRIVESVAGVMVDVPDGVDLVPG
VYEGGLKVWESSVDLVRYLQQHNLVQLHHRVLELGCGHGLPGIHALQQGA
ASVTFLDLNEEVLREVTGPNICLNVDSTDDLSKRVTLVSGDWEAASEVLN
QHVPAAFDVIVSAETFYTSLVTEKLLNTIHRHLARQPPGAVAIVAGKRYY
FGTGGSVVDLGARASALGFESRVVASVEDGKSNIRDLIEITWK*
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Synonyms
Publications